Diego_Prada's profile

Recent Activity

• 15:21: posted Translational, rotational and internal dynamics of amyloid beta-peptides (A beta 40 and A beta 42) from molecular dynamics simulations

• 20:20: posted Power-law distributions in empirical data
• 20:18: posted Log-normal Distributions across the Sciences: Keys and Clues
• 20:10: posted Characterization of Protein Conformational States by Normal-Mode Frequencies
• 19:58: posted Estimating the sampling error: Distribution of transition matrices and functions of transition matrices for given trajectory data
• 19:52: posted Progress and challenges in the automated construction of Markov state models for full protein systems
• 18:55: posted Transition Networks for the Comprehensive Characterization of Complex Conformational Change in Proteins
• 18:13: posted Identification of the protein folding transition state from molecular dynamics trajectories
• 18:06: posted Using generalized ensemble simulations and Markov state models to identify conformational states
• 18:00: posted Constructing the equilibrium ensemble of folding pathways from short off-equilibrium simulations
• 17:48: posted Molecular dynamics-based approaches for enhanced sampling of long-time, large-scale conformational changes in biomolecules
• 11:53: posted Weighted ensemble dynamics simulation for detecting metastable states in complex conformational spaces

• 19:00: posted The Structure and Function of Complex Networks
• 18:16: posted Community Structure in Directed Networks
• 16:36: posted Role of backbone solvation and electrostatics in generating preferred peptide backbone conformations: Distributions of phi
• 16:31: posted Common Structural Transitions in Explicit-Solvent Simulations of Villin Headpiece Folding
• 16:19: posted A discussion of the solution for the best rotation to relate two sets of vectors

• 19:29: posted Exploring energy landscapes of protein folding and aggregation.

• 19:12: posted Structural flexibility in proteins: impact of the crystal environment
• 19:09: posted Coarse-Grained Biomolecular Simulation with REACH: Realistic Extension Algorithm via Covariance Hessian☆
• 19:00: posted Application of Elastic Network Models to Proteins in the Crystalline State
• 18:53: posted Collective Dynamics of Periplasmic Glutamine Binding Protein upon Domain Closure
• 18:46: posted Harmonicity in slow protein dynamics
• 18:38: posted Protein elastic network models and the ranges of cooperativity
• 18:28: posted Physical arguments for distance-weighted interactions in elastic network models for proteins