Hans45's Top Recommendations

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	Allelic imbalances and microdeletions affecting the PTPRD gene in cutaneous squamous cell carcinomas detected using single nucleotide polymorphism microarray analysis. [My Copy] Genes, chromosomes & cancer, Vol. 46, No. 7. (July 2007), pp. 661-669. by K. J. Purdie, S. R. Lambert, M. T. Teh, et al.T. Chaplin, G. Molloy, M. Raghavan, D. P. Kelsell, I. M. Leigh, C. A. Harwood, C. M. Proby, B. D. Young posted by 1 person gruberjd
	Promoter polymorphisms in ACE (angiotensin I-converting enzyme) associated with clinical outcomes in hypertension. [My Copy] Clinical pharmacology and therapeutics, Vol. 85, No. 1. (January 2009), pp. 36-44. by A. D. Johnson, Y. Gong, D. Wang, et al.T. Y. Langaee, J. Shin, R. M. Cooper-Dehoff, N. J. Schork, P. Binkley, C. J. Pepine, J. A. Johnson, W. Sadee posted by 1 person gruberjd
	Allele-Specific Gene Expression Is Widespread Across the Genome and Biological Processes [My Copy] PLoS ONE, Vol. 4, No. 1. (7 January 2009), e4150. by Ricardo Palacios, Elodie Gazave, Joaquín Goñi, et al.Gabriel Piedrafita, Olga Fernando, Arcadi Navarro, Pablo Villoslada posted by 5 people daforerog gruberjd guhjy john_strauss vplagnol
	Targeted screening of cis-regulatory variation in human haplotypes. [My Copy] Genome research, Vol. 19, No. 1. (24 January 2009), pp. 118-127. by D. J. Verlaan, B. Ge, E. Grundberg, et al.R. Hoberman, K. C. Lam, V. Koka, J. Dias, S. Gurd, N. W. Martin, H. Mallmin, O. Nilsson, E. Harmsen, K. Dewar, T. Kwan, T. Pastinen posted by 7 people guhjy alweber athma vplagnol Bioinformatics - CRUK Stew gruberjd
	A risk haplotype of STAT4 for systemic lupus erythematosus is over-expressed, correlates with anti-dsDNA and shows additive effects with two risk alleles of IRF5. [My Copy] Human molecular genetics, Vol. 17, No. 18. (15 September 2008), pp. 2868-2876. by S. Sigurdsson, G. Nordmark, S. Garnier, et al.E. Grundberg, T. Kwan, O. Nilsson, M. L. Eloranta, I. Gunnarsson, E. Svenungsson, G. Sturfelt, A. A. Bengtsson, A. Jönsen, L. Truedsson, S. Rantapää-Dahlqvist, C. Eriksson, G. Alm, H. H. Göring, T. Pastinen, A. C. Syvänen, L. Rönnblom posted by 1 person gruberjd
	Systematic assessment of the human osteoblast transcriptome in resting and induced primary cells. [My Copy] Physiological genomics, Vol. 33, No. 3. (13 May 2008), pp. 301-311. by E. Grundberg, H. Brändström, K. C. Lam, et al.S. Gurd, B. Ge, E. Harmsen, A. Kindmark, O. Ljunggren, H. Mallmin, O. Nilsson, T. Pastinen posted by 1 person gruberjd
	Germline Allele-Specific Expression of TGFBR1 Confers an Increased Risk of Colorectal Cancer [My Copy] Science, Vol. 321, No. 5894. (5 September 2008), pp. 1361-1365. by Laura Valle, Tarsicio Serena-Acedo, Sandya Liyanarachchi, et al.Heather Hampel, Ilene Comeras, Zhongyuan Li, Qinghua Zeng, Hong-Tao Zhang, Michael J. Pennison, Maureen Sadim, Boris Pasche, Stephan M. Tanner, de La posted by 4 people gruberjd xingxu jfr caseybrown
	Deletion polymorphism upstream of IRGM associated with altered IRGM expression and Crohn's disease [My Copy] Nat Genet, Vol. 40, No. 9. (2008), pp. 1107-1112. by Steven A. Mccarroll, Alan Huett, Petric Kuballa, et al.Shannon D. Chilewski, Aimee Landry, Philippe Goyette, Michael C. Zody, Jennifer L. Hall, Steven R. Brant, Judy H. Cho, Richard H. Duerr, Mark S. Silverberg, Kent D. Taylor, John D. Rioux, David Altshuler, Mark J. Daly, Ramnik J. Xavier posted by 3 people gruberjd vplagnol caseybrown
	A comprehensive strategy enabling high-resolution functional analysis of the yeast genome [My Copy] Nat Meth, Vol. 5, No. 8. (11 August 2008), pp. 711-718. by David K. Breslow, Dale M. Cameron, Sean R. Collins, et al.Maya Schuldiner, Jacob Stewart-Ornstein, Heather W. Newman, Sigurd Braun, Hiten D. Madhani, Nevan J. Krogan, Jonathan S. Weissman posted by 6 people michaelbarton jbhiatt lbnc ajbattle gruberjd guhjy
	Genome-wide association defines more than 30 distinct susceptibility loci for Crohn's disease [My Copy] Nat Genet, Vol. 40, No. 8. (29 August 2008), pp. 955-962. by Jeffrey C. Barrett, Sarah Hansoul, Dan L. Nicolae, et al.Judy H. Cho, Richard H. Duerr, John D. Rioux, Steven R. Brant, Mark S. Silverberg, Kent D. Taylor, Michael M. Barmada, Alain Bitton, Themistocles Dassopoulos, Lisa W. Datta, Todd Green, Anne M. Griffiths, Emily O. Kistner, Michael T. Murtha, Miguel D. Regueiro, Jerome I. Rotter, L. Philip Schumm, A. Hillary Steinhart, Stephan R. Targan, Ramnik J. Xavier, Cecile Libioulle, Cynthia Sandor, Mark Lathrop, Jacques Belaiche, Olivier Dewit, Ivo Gut, Simon Heath, Debby Laukens, Myriam Mni, Paul Rutgeerts, Andre Van Gossum, Diana Zelenika, Denis Franchimont, Jean-Pierre Hugot, Martine de Vos, Severine Vermeire, Edouard Louis, Lon R. Cardon, Carl A. Anderson, Hazel Drummond, Elaine Nimmo, Tariq Ahmad, Natalie J. Prescott, Clive M. Onnie, Sheila A. Fisher, Jonathan Marchini, Jilur Ghori, Suzannah Bumpstead, Rhian Gwilliam, Mark Tremelling, Panos Deloukas, John Mansfield, Derek Jewell, Jack Satsangi, Christopher G. Mathew, Miles Parkes, Michel Georges, Mark J. Daly posted by 4 people pkonings kimorley vplagnol gruberjd
	Novel Crohn disease locus identified by genome-wide association maps to a gene desert on 5p13.1 and modulates expression of PTGER4. [My Copy] PLoS genetics, Vol. 3, No. 4. (20 April 2007) by C. Libioulle, E. Louis, S. Hansoul, et al.C. Sandor, F. Farnir, D. Franchimont, S. Vermeire, O. Dewit, M. de Vos, A. Dixon, B. Demarche, I. Gut, S. Heath, M. Foglio, L. Liang, D. Laukens, M. Mni, D. Zelenika, A. Van Gossum, P. Rutgeerts, J. Belaiche, M. Lathrop, M. Georges posted by 3 people gruberjd jo_davies xingxu
	Multiple Loci With Different Cancer Specificities Within the 8q24 Gene Desert [My Copy] J. Natl. Cancer Inst., Vol. 100, No. 13. (2 July 2008), pp. 962-966. by Maya Ghoussaini, Honglin Song, Thibaud Koessler, et al. Al, Zsofia Kote-Jarai, Kristy E. Driver, Karen A. Pooley, Susan J. Ramus, Susanne K. Kjaer, Estrid Hogdall, Richard A. Dicioccio, Alice S. Whittemore, Simon A. Gayther, Graham G. Giles, Michelle Guy, Stephen M. Edwards, Jonathan Morrison, Jenny L. Donovan, Freddie C. Hamdy, David P. Dearnaley, Audrey T. Ardern-Jones, Amanda L. Hall, Lynne T. O'Brien, Beatrice N. Gehr-Swain, Rosemary A. Wilkinson, Paul M. Brown, John L. Hopper, David E. Neal, Paul D. Pharoah, Bruce A. Ponder, Rosalind A. Eeles, Douglas F. Easton, Alison M. Dunning, For posted by 4 people gruberjd jo_davies jfr xingxu
	Analysis of multiple SNPs in a candidate gene or region. [My Copy] Genetic epidemiology (21 April 2008) by Juliet Chapman, John Whittaker posted by 3 people akmanning gruberjd guhjy
	Differential allelic expression in the human genome: a robust approach to identify genetic and epigenetic cis-acting mechanisms regulating gene expression. [My Copy] PLoS genetics, Vol. 4, No. 2. (29 February 2008), e1000006. by D. Serre, S. Gurd, B. Ge, et al.R. Sladek, D. Sinnett, E. Harmsen, M. Bibikova, E. Chudin, D. L. Barker, T. Dickinson, J. B. Fan, T. J. Hudson posted by 9 people fenghezi athma gruberjd guhjy vplagnol dpollard cis-regulatory-evolution RockmanLab caseybrown
	Bone mineral density, osteoporosis, and osteoporotic fractures: a genome-wide association study [My Copy] The Lancet, Vol. 371, No. 9623., pp. 1505-1512. by J. B. Richards, F. Rivadeneira, M. Inouye, et al.T. M. Pastinen, N. Soranzo, S. G. Wilson, T. Andrew, M. Falchi, R. Gwilliam, K. R. Ahmadi, A. M. Valdes, P. Arp, P. Whittaker, D. J. Verlaan, M. Jhamai, V. Kumanduri, M. Moorhouse, J. B. van Meurs, A. Hofman, H. A. P. Pols, D. Hart, G. Zhai, B. S. Kato, B. H. Mullin, F. Zhang, P. Deloukas, A. G. Uitterlinden, T. D. Spector posted by 3 people ajaymalik gruberjd guhjy
	Communication over a large distance: enhancers and insulators. [My Copy] Biochemistry and cell biology = Biochimie et biologie cellulaire, Vol. 81, No. 3. (June 2003), pp. 241-251. by V. A. Bondarenko, Y. V. Liu, Y. I. Jiang, V. M. Studitsky posted by 2 people gruberjd brant
	SNP-specific array-based allele-specific expression analysis. [My Copy] Genome research, Vol. 18, No. 5. (27 May 2008), pp. 771-779. by H. T. Bjornsson, T. J. Albert, C. M. Ladd-Acosta, et al.R. D. Green, M. A. Rongione, C. M. Middle, R. A. Irizarry, K. W. Broman, A. P. Feinberg posted by 7 people vplagnol gruberjd xwbcn guhjy rschulz dpollard RockmanLab
	Estimating the per-base-pair mutation rate in the yeast Saccharomyces cerevisiae. [My Copy] Genetics, Vol. 178, No. 1. (1 January 2008), pp. 67-82. by G. I. Lang, A. W. Murray posted by 6 people dbensasson Annab benjaminsb gruberjd stajich Mycology
	A genome-wide association study of global gene expression [My Copy] Nature Genetics, Vol. 39, No. 10. (16 September 2007), pp. 1202-1207. by Anna L. Dixon, Liming Liang, Miriam F. Moffatt, et al.Wei Chen, Simon Heath, Kenny C. C. Wong, Jenny Taylor, Edward Burnett, Ivo Gut, Martin Farrall, G. Mark Lathrop, Goncalo R. Abecasis, William O. C. Cookson posted by 13 people daforerog turnersd caseybrown tg150 xingxu gruberjd balicea rdiaz djkt vplagnol jo_davies mimulus_99 ptrobajo
	Mechanisms by which common variants in the TCF7L2 gene increase risk of type 2 diabetes. [My Copy] J Clin Invest, Vol. 117, No. 8. (1 August 2007), pp. 2155-2163. by Valeriya Lyssenko, Roberto Lupi, Piero Marchetti, et al.Silvia Del Guerra, Marju Orho-Melander, Peter Almgren, Marketa Sjögren, Charlotte Ling, Karl-Fredrik F. Eriksson, Upsilonsa-Linda L. Lethagen, Rita Mancarella, Göran Berglund, Tiinamaija Tuomi, Peter Nilsson, Stefano Del Prato, Leif Groop posted by 2 people gruberjd Terkko
	Copy number variants and genetic traits: closer to the resolution of phenotypic to genotypic variability [My Copy] Nat Rev Genet, Vol. 8, No. 8. (2007), pp. 639-646. by Jacques S. Beckmann, Xavier Estivill, Stylianos E. Antonarakis posted by 7 people sameersoi gruberjd frohike waszak rdiaz ryanraaum Bioinformatics
	Genetic variants regulating ORMDL3 expression contribute to the risk of childhood asthma [My Copy] Nature (04 July 2007) by Miriam F. Moffatt, Michael Kabesch, Liming Liang, et al.Anna L. Dixon, David Strachan, Simon Heath, Martin Depner, Andrea von Berg, Albrecht Bufe, Ernst Rietschel, Andrea Heinzmann, Burkard Simma, Thomas Frischer, Saffron A. G. Willis-Owen, Kenny C. C. Wong, Thomas Illig, Christian Vogelberg, Stephan K. Weiland, Erika von Mutius, Gonçalo R. Abecasis, Martin Farrall, Ivo G. Gut, Mark G. Lathrop, William O. C. Cookson posted by 5 people gruberjd dpollard vplagnol jo_davies EisenLab
	Genome-wide association study identifies new susceptibility loci for Crohn disease and implicates autophagy in disease pathogenesis [My Copy] Nature Genetics, Vol. 39, No. 5. (15 April 2007), pp. 596-604. by John D. Rioux, Ramnik J. Xavier, Kent D. Taylor, et al.Mark S. Silverberg, Philippe Goyette, Alan Huett, Todd Green, Petric Kuballa, Michael M. Barmada, Lisa W. Datta, Yin Y. Shugart, Anne M. Griffiths, Stephan R. Targan, Andrew F. Ippoliti, Edmond-Jean Bernard, Ling Mei, Dan L. Nicolae, Miguel Regueiro, Philip L. Schumm, Hillary A. Steinhart, Jerome I. Rotter, Richard H. Duerr, Judy H. Cho, Mark J. Daly, Steven R. Brant posted by 3 people gruberjd kentsis frohike
	Allele-specific gene expression uncovered. [My Copy] Trends Genet, Vol. 20, No. 3. (March 2004), pp. 113-116. by J. C. Knight posted by 3 people gruberjd RMGraze emarker
	Yeast vectors for the controlled expression of heterologous proteins in different genetic backgrounds. [My Copy] Gene, Vol. 156, No. 1. (14 April 1995), pp. 119-122. by D. Mumberg, R. Müller, M. Funk posted by 3 people gruberjd Dualsystems raiyar
	Survey of allelic expression using EST mining. [My Copy] Genome research, Vol. 15, No. 11. (1 November 2005), pp. 1584-1591. by B. Ge, S. Gurd, T. Gaudin, et al.C. Dore, P. Lepage, E. Harmsen, T. J. Hudson, T. Pastinen posted by 4 people vplagnol gruberjd qfwills ashandanj
	Die japanische Pharmaindustrie [My Copy] Japans Zukunftsindustrien (2007), pp. 103-123. by Jörg Mahlich
	Modelling gene expression data using dynamic bayesian networks [My Copy] (1999) by Kevin Murphy, Saira Mian posted by 2 people verdicchio czeller
	Maintenance of transitive closures and transitive reductions of graphs [My Copy] Graph-Theoretic Concepts in Computer Science (1988), pp. 106-120. by J. La Poutré, J. van Leeuwen posted by 1 person czeller
	The Nthrlan& MAINTENANCE OF TRANSITIVE CLOSURES AND TRANSITIVE REDUCTIONS OF GRAPHS [My Copy] by J. A. La, Poutr J. Leeuwen, Vakgroep Informatica posted by 1 person czeller
	The Elements of Statistical Learning: Data Mining, Inference, and Prediction, Second Edition (Springer Series in Statistics) [My Copy] (15 September 2009) by Trevor Hastie, Robert Tibshirani, Jerome Friedman posted by 10 people pjmaybank robertlischke derwisch saus83 Diego_Prada ilyashl ocs christofseiler matjes czeller
	Sensing and signaling during infection in Drosophila. [My Copy] Current opinion in immunology, Vol. 17, No. 1. (February 2005), pp. 11-17. by J. Royet, J. M. Reichhart, J. A. Hoffmann posted by 1 person czeller
	Sequential activation of signaling pathways during innate immune responses in Drosophila. [My Copy] Developmental cell, Vol. 3, No. 5. (November 2002), pp. 711-722. by M. Boutros, H. Agaisse, N. Perrimon posted by 1 person czeller
	Estimation of genetic networks and functional structures between genes by using Bayesian networks and nonparametric regression [My Copy] In Pacific Symposium on Biocomputing, Vol. 7 (2002), pp. 175-186. by Seiya Imoto, Takao Goto, Satoru Miyano posted by 1 person czeller
	Pages 1--9 Inferring Subnetworks from Perturbed Expression Profiles [My Copy] by Aviv Regev, Gal Elidan, Nir Friedman posted by 1 person czeller
	Using Bayesian networks to analyze expression data [My Copy] Journal of Computational Biology, Vol. 7 (2000), pp. 601-620. by Nir Friedman, Michal Linial, Iftach Nachman posted by 1 person czeller
	A Bayesian approach to learning causal networks [My Copy] In In Proceedings of Eleventh Conference on Uncertainty in Artificial Intelligence (1995), pp. 285-295. by David Heckerman posted by 3 people jrcoffi markstoehr czeller
	Learning Bayesian networks: The combination of knowledge and statistical data [My Copy] In Machine Learning, Vol. 20 (1995), pp. 197-243. by David Heckerman, Dan Geiger, David M. Chickering posted by 1 person czeller
	A THEORY OF INFERRED CAUSATION Judea Pearl [My Copy] by T. S. Verma posted by 1 person czeller
	Causation, Prediction, and Search (Lecture Notes in Statistics) [My Copy] by Peter Spirtes, Clark Glymour, Richard Scheines posted by 1 person czeller
	Modeling synthetic lethality [My Copy] Genome Biology, Vol. 9 (12 September 2008), R135. by Nolwenn Le Meur, Robert Gentleman posted by 4 people myzhang dakelley czeller bpcusack
	Analyzing gene perturbation screens with nested effects models in R and bioconductor. [My Copy] Bioinformatics (Oxford, England), Vol. 24, No. 21. (1 November 2008), pp. 2549-2550. by H. Fröhlich, T. Beissrth, A. Tresch, et al.D. Kostka, J. Jacob, R. Spang, F. Markowetz posted by 2 people czeller guhjy
	A Bayesian Approach to Causal Discovery [My Copy] (1997) by David Heckerman, Christopher Meek, Gregory Cooper posted by 2 people czeller naegele
	A Bayesian method for the induction of probabilistic networks from data [My Copy] Machine Learning, Vol. 9, No. 4. (1 October 1992), pp. 309-347. by Gregory F. Cooper, Edward Herskovits posted by 5 people arturdnt oconnonp kennedie tessaverhoef czeller
	Structure learning in Nested Effects Models. [My Copy] Statistical applications in genetics and molecular biology, Vol. 7, No. 1. (2008) by A. Tresch, F. Markowetz posted by 3 people arsyed czeller tresch
	Bayesian Inference in Statistical Analysis (Wiley Classics Library) [My Copy] (21 April 1992) by George E. P. Box, George C. Tiao posted by 4 people aldajah fjanoos quianominorleo czeller
	Detecting hierarchical structure in molecular characteristics of disease using transitive approximations of directed graphs. [My Copy] Bioinformatics (19 February 2008) by Juby Jacob, Marcel Jentsch, Dennis Kostka, Stefan Bentink, Rainer Spang posted by 3 people czeller shigepong ptrobajo
	Estimating Large Scale Signaling Networks through Nested Effect Models with Intervention Effects from Microarray Data. [My Copy] Bioinformatics (28 January 2008) by Holger Fröhlich, Mark Fellmann, Holger Sültmann, Annemarie Poustka, Tim Beissbarth posted by 4 people jfr guhjy shigepong czeller
	Nested effects models for high-dimensional phenotyping screens. [My Copy] Bioinformatics (Oxford, England), Vol. 23, No. 13. (1 July 2007), pp. i305-312. by F. Markowetz, D. Kostka, O. G. Troyanskaya, R. Spang posted by 7 people arsyed engelhardt roys guhjy tmmurali jiny czeller
	Large scale statistical inference of signaling pathways from RNAi and microarray data [My Copy] BMC Bioinformatics, Vol. 8, No. 1. (2007) by Holger Froehlich, Mark Fellmann, Holger Sueltmann, Annemarie Poustka, Tim Beissbarth posted by 4 people heliopais seemu czeller guhjy
	Inferring cellular networks - a review [My Copy] BMC Bioinformatics, Vol. 8, No. Suppl 6. (2007), S5. by Florian Markowetz, Rainer Spang posted by 16 people jaspervoskuilen antonkratz daforerog chica ocs roys cswinburne ndiaz edwardmorrissey guhjy tmmurali shigepong dejori heliopais bertelsen czeller
	Optimization by Simulated Annealing. [My Copy] Science (New York, N.Y.), Vol. 220, No. 4598. (13 May 1983), pp. 671-680. by S. Kirkpatrick, C. D. Gelatt, M. P. Vecchi posted by 16 people duelines chrisfischer poirel brothers vtraag rtsade jstephens kentz eskay czeller gale82 ddahlem Bc91 naegele ywlin newton1234
	Estimating the occurrence of false positives and false negatives in microarray studies by approximating and partitioning the empirical distribution of p-values [My Copy] Bioinformatics, Vol. 19, No. 10. (1 July 2003), pp. 1236-1242. by Stan Pounds, Stephan W. Morris posted by 3 people poirel czeller ugengma
	Global analysis of gene function in yeast by quantitative phenotypic profiling. [My Copy] Mol Syst Biol, Vol. 2 (2006) by J. A. Brown, G. Sherlock, C. L. Myers, et al.N. M. Burrows, C. Deng, H. I. Wu, K. E. McCann, O. G. Troyanskaya, J. M. Brown posted by 2 people czeller JBEgwa01
	Genetic reconstruction of a functional transcriptional regulatory network. [My Copy] Nat Genet (8 April 2007) by Zhanzhi Hu, Patrick J J. Killion, Vishwanath R R. Iyer posted by 22 people sergiun TheresaNiederberger akraemer behindtherabbit ptrobajo dpollard xico nickluscombe zwang lizabeth dejori xingxu naegele Bioinformatics EisenLab WetBiology EBI-regulation ic4 generif_paper czeller mapplab siebert
	Toward a Comprehensive Atlas of the Physical Interactome of Saccharomyces cerevisiae [My Copy] Mol Cell Proteomics, Vol. 6, No. 3. (1 March 2007), pp. 439-450. by Sean R. Collins, Patrick Kemmeren, Xue-Chu Zhao, et al.Jack F. Greenblatt, Forrest Spencer, Frank C. P. Holstege, Jonathan S. Weissman, Nevan J. Krogan posted by 12 people mtaschuk bicko ajbattle lpfernandes elenaz czeller nickluscombe grahamc EBI-regulation roys csanford paolomarcatili
	Controlling the False Discovery Rate: A Practical and Powerful Approach to Multiple Testing [My Copy] Journal of the Royal Statistical Society. Series B (Methodological), Vol. 57, No. 1. (1995), pp. 289-300. by Yoav Benjamini, Yosef Hochberg posted by 43 people Biostatistics ctacmo abrentnall jperkins CulCog jlorent zufar bertelsen Zephyrus fisherp michaelbarton dakelley lwaldron polivares brianb ucbcjbm jfr xingxu emptyhb renewang Yanno sdvillal druvus natstreet czeller guhjy RMGraze oannes vplagnol frohike grahamc shigepong ccr axelon ugengma amsantos Bioinformatics Regulomics_UCHSC rschulz dragonrez isimpson vertikalist BTS-PT-AS-CS
	Comparative evaluation of reverse engineering gene regulatory networks with relevance networks, graphical gaussian models and bayesian networks [My Copy] Bioinformatics, Vol. 22, No. 20. (15 October 2006), pp. 2523-2531. by Werhli, V. Adriano, Grzegorczyk, Marco, Husmeier, Dirk posted by 4 people czeller alokm Borelli roys
	A DNA integrity network in the yeast Saccharomyces cerevisiae. [My Copy] Cell, Vol. 124, No. 5. (10 March 2006), pp. 1069-1081. by X. Pan, P. Ye, D. S. Yuan, X. Wang, J. S. Bader, J. D. Boeke posted by 2 people czeller nirfriedman
	Reconstruction of gene networks using Bayesian learning and manipulation experiments [My Copy] Bioinformatics, Vol. 20, No. 17. (22 November 2004), pp. 2934-2942. by Iosifina Pournara, Lorenz Wernisch posted by 7 people czeller lfriedl wnpx aleks kdl Compilers Yumyai
	High-dimensional and large-scale phenotyping of yeast mutants. [My Copy] Proceedings of the National Academy of Sciences of the United States of America, Vol. 102, No. 52. (27 December 2005), pp. 19015-19020. by Yoshikazu Ohya, Jun Sese, Masashi Yukawa, et al.Fumi Sano, Yoichiro Nakatani, Taro L. Saito, Ayaka Saka, Tomoyuki Fukuda, Satoru Ishihara, Satomi Oka, Genjiro Suzuki, Machika Watanabe, Aiko Hirata, Miwaka Ohtani, Hiroshi Sawai, Nicolas Fraysse, Jean-Paul P. Latgé, Jean M. François, Markus Aebi, Seiji Tanaka, Sachiko Muramatsu, Hiroyuki Araki, Kintake Sonoike, Satoru Nogami, Shinichi Morishita posted by 10 people bpcusack nicholasflann taroleo pauldobson czeller sesejun yeastyboy cjeans jiny guhjy
	Causality : Models, Reasoning, and Inference [My Copy] (13 March 2000) by Judea Pearl posted by 13 people brianprickett Borelli Benja cyberwulf czeller wnpx paulclinger mp4man helsley robotact soc597 pylikosk rrbarb
	Inferring subnetworks from perturbed expression profiles [My Copy] Bioinformatics, Vol. 17, No. suppl_1. (1 June 2001), pp. S215-224. by Dana Pe'er, Aviv Regev, Gal Elidan, Nir Friedman posted by 5 people kentz czeller cswinburne wnpx frohike
	Potent and specific genetic interference by double-stranded RNA in Caenorhabditis elegans. [My Copy] Nature, Vol. 391, No. 6669. (19 February 1998), pp. 806-811. by A. Fire, S. Xu, M. K. Montgomery, S. A. Kostas, S. E. Driver, C. C. Mello posted by 15 people duncan742 schmidtm thegoose2 micromassive czeller C. elegans / WormBase tharris dayjm tardigrade mtagaya raylim shizhao Wikipedia benlin elfar
	Gene function prediction from congruent synthetic lethal interactions in yeast [My Copy] Molecular Systems Biology, Vol. 1, No. 1. (22 November 2005), pp. msb4100034-E1-msb4100034-E12. by Ping Ye, Brian D. Peyser, Xuewen Pan, Jef D. Boeke, Forrest A. Spencer, Joel S. Bader posted by 3 people czeller nirfriedman tresch
	A robust toolkit for functional profiling of the yeast genome. [My Copy] Mol Cell, Vol. 16, No. 3. (5 November 2004), pp. 487-496. by X. Pan, D. S. Yuan, D. Xiang, et al.X. Wang, S. Sookhai-Mahadeo, J. S. Bader, P. Hieter, F. Spencer, J. D. Boeke posted by 3 people dakelley czeller opheliav
	Non-transcriptional pathway features reconstructed from secondary effects of RNA interference [My Copy] Bioinformatics, Vol. 21, No. 21. (1 November 2005), pp. 4026-4032. by Florian Markowetz, Jacques Bloch, Rainer Spang posted by 2 people heliopais czeller
	Causal Protein-Signaling Networks Derived from Multiparameter Single-Cell Data [My Copy] Science, Vol. 308, No. 5721. (22 April 2005), pp. 523-529. by Karen Sachs, Omar Perez, Dana Pe'er, Douglas A. Lauffenburger, Garry P. Nolan posted by 25 people pkm phoenixzxl sameersoi abhishek_tiwari poirel roys frohike aviad_work czeller emptyhb kentsis kaarsinogen balajis rand_bayes ryang wnpx os252 j3xucite noano koller jhatrimatri cdppublications lp2 CDP saman_vp
	Optimal Statistical Decisions (Wiley Classics Library) [My Copy] (16 April 2004) by Morris H. Degroot posted by 5 people bsilverthorn ahuesler brian rschwabe czeller
	Bioconductor: open software development for computational biology and bioinformatics. [My Copy] Genome biology, Vol. 5, No. 10. (2004), R80. by Robert C. Gentleman, Vincent J. Carey, Douglas M. Bates, et al.Ben Bolstad, Marcel Dettling, Sandrine Dudoit, Byron Ellis, Laurent Gautier, Yongchao Ge, Jeff Gentry, Kurt Hornik, Torsten Hothorn, Wolfgang Huber, Stefano Iacus, Rafael Irizarry, Friedrich Leisch, Cheng Li, Martin Maechler, Anthony J. Rossini, Gunther Sawitzki, Colin Smith, Gordon Smyth, Luke Tierney, Jean Y. Yang, Jianhua Zhang posted by 27 people shikin schwalb mqbphcw3 isimpson anf sebastien_vigneau najwvandijk coela YukaH daforerog czeller gupton Dax42 pcahan1 balajis dullhunk giovanni incovoma talponer GeschwindLab medha1 wirawan joule zhouyu bertelsen sanchezbuelna bakakaj
	Maximum Likelihood from Incomplete Data via the EM Algorithm [My Copy] Journal of the Royal Statistical Society. Series B (Methodological), Vol. 39, No. 1. (1977), pp. 1-38. by A. P. Dempster, N. M. Laird, D. B. Rubin posted by 85 people fjanoos beete chrahn flieder ianhales asterix77 Gorzomagnificent SEM Biostatistics ctacmo reconnie claurier tkollar rily matjes erhanbas mthomure austin987 chiarafulgenzi mhofree NChopin ppeeling zhouyanpharm thefillm LanguageModeling ilps ejmeij tadao1102 czeller markusd zeppe Maderlock abrentnall cfelipesp jake ingo anoopsarkar gangli rpadams wkw hoangmtbk dragonrez Freyr lukec dheena songhaoyuan amirsaemi j3xucite ecome walkking nandan marrtin tvdbulck MichaelDonoser MikeDoni rwilliamson calamar qq987 ichbins81 petrposik ggorjan shiquanwang lcigler ciga Statistics_and_Social_Science tulip LTN Computer_Graphics Computational_Information_Geometry kvorg ifejobi DavidSchulz ykuoka singhsh trop_wizz eddymier Medical Image Analysis and Visualization @ OSU schulz stkhu eegilbert weymouth wenhan MBLAB qwermish iansimon
	Learning Bayesian Networks [My Copy] (01 April 2003) by Richard E. Neapolitan posted by 12 people tvdbulck ldfu garyfeng balicea wnpx harriscd wasteland93 naegele ReadingLab quianominorleo czeller abellogin
	Global Mapping of the Yeast Genetic Interaction Network [My Copy] Science, Vol. 303, No. 5659. (6 February 2004), pp. 808-813. by Amy H. Tong, Guillaume Lesage, Gary D. Bader, et al.Huiming Ding, Hong Xu, Xiaofeng Xin, James Young, Gabriel F. Berriz, Renee L. Brost, Michael Chang, YiQun Chen, Xin Cheng, Gordon Chua, Helena Friesen, Debra S. Goldberg, Jennifer Haynes, Christine Humphries, Grace He, Shamiza Hussein, Lizhu Ke, Nevan Krogan, Zhijian Li, Joshua N. Levinson, Hong Lu, Patrice Menard, Christella Munyana, Ainslie B. Parsons, Owen Ryan, Raffi Tonikian, Tania Roberts, Anne-Marie Sdicu, Jesse Shapiro, Bilal Sheikh, Bernhard Suter, Sharyl L. Wong, Lan V. Zhang, Hongwei Zhu, Christopher G. Burd, Sean Munro, Chris Sander, Jasper Rine, Jack Greenblatt, Matthias Peter, Anthony Bretscher, Graham Bell, Frederick P. Roth, Grant W. Brown, Brenda Andrews, Howard Bussey, Charles Boone posted by 33 people kentz colmryan meanerelk rdowell TheresaNiederberger dakelley kinop nzm roys ajbattle czeller ldfu pcahan1 lfriedl lyongu luispedro opheliav tabu Chue nirfriedman nickluscombe koller raiyar patrycjam patrycja_missiuro kdl EBI-regulation jiny chasmand tresch Takayuki ksiek carlk
	Emergence of Scaling in Random Networks [My Copy] Science, Vol. 286, No. 5439. (15 October 1999), pp. 509-512. by Albert-László Barabási, Réka Albert posted by 52 people asangansi tonyony tessonec leonglester aniakovas nlimam acrmartins bivas makukha melo_mcr thepogoman vmarceau mfuhr tomhebbron eitanla1 voiklis jb44 kinop panisson anphony Adso mattjb phoenixzxl sWorgan czeller alanyang kaarsinogen diamantis pgastrein nolodie qwermish dragonrez shivaram tolosoft balicea ddahlem merazzle Borelli muraken lshaw gurkanbebek jaspervoskuilen rcrane ransombriggs idreams2 nkishan justforscraps Evangelia kb Diego_Prada subhacom ethkim
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	A functional genomics strategy that uses metabolome data to reveal the phenotype of silent mutations. [My Copy] Nature biotechnology, Vol. 19, No. 1. (January 2001), pp. 45-50. by L. M. Raamsdonk, B. Teusink, D. Broadhurst, et al.N. Zhang, A. Hayes, M. C. Walsh, J. A. Berden, K. M. Brindle, D. B. Kell, J. J. Rowland, H. V. Westerhoff, K. van Dam, S. G. Oliver posted by 12 people michaelbarton Garth_9145 czeller dbk irenas dullhunk raiyar streptomyces dbk-lab steinmetzlab katerinakal JeremyZucker
	Multi-label Classification Using Ensembles of Pruned Sets [My Copy] Data Mining, 2008. ICDM '08. Eighth IEEE International Conference on In ICDM '08: Proceedings of the 2008 Eighth IEEE International Conference on Data Mining, Vol. 0 (2008), pp. 995-1000. by Jesse Read, Bernhard Pfahringer, Geoff Holmes posted by 5 people rahOSU egibaja Multilabel Classification jread82 mlkd
	Targeting and tinkering with interaction networks [My Copy] Nature Chemical Biology, Vol. 4, No. 11. (20 October 2008), pp. 666-673. by Robert B. Russell, Patrick Aloy posted by 5 people Orengo Group Journal Picks lees jperkins zwang chad_davis
	A novel data mining algorithm for reconstructing gene regulatory networks from microarray data [My Copy] In SAC '06: Proceedings of the 2006 ACM symposium on Applied computing (2006), pp. 202-203. by Patrick C. H. Ma, Keith C. C. Chan
	Combinatorial Search Methods for Multi-SNP Disease Association [My Copy] Engineering in Medicine and Biology Society, 2006. EMBS '06. 28th Annual International Conference of the IEEE In Engineering in Medicine and Biology Society, 2006. EMBS '06. 28th Annual International Conference of the IEEE (2006), pp. 5802-5805. by D. Brinza, Jingwu He, A. Zelikovsky
	Gene set enrichment analysis using linear models and diagnostics. [My Copy] Bioinformatics (Oxford, England), Vol. 24, No. 22. (15 November 2008), pp. 2586-2591. by A. P. Oron, Z. Jiang, R. Gentleman posted by 9 people jfr rdiaz guhjy sg45653 natstreet druvus aviad_work giovenko aconesa
	Using indirect protein-protein interactions for protein complex prediction. [My Copy] Journal of bioinformatics and computational biology, Vol. 6, No. 3. (June 2008), pp. 435-466. by H. N. Chua, K. Ning, W. K. Sung, H. W. Leong, L. Wong posted by 1 person chad_davis
	Protein networking: insights into global functional organization of proteomes. [My Copy] Proteomics, Vol. 8, No. 4. (February 2008), pp. 799-816. by E. Pieroni, S. de la Fuente van Bentem, G. Mancosu, E. Capobianco, H. Hirt, A. de la Fuente posted by 6 people jaimie nedwards thegoose Sonix yyby guhjy
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	Protein networks in disease. [My Copy] Genome research, Vol. 18, No. 4. (1 April 2008), pp. 644-652. by Trey Ideker, Roded Sharan posted by 28 people shikin carlk isimpson chica saket zufar kaarsinogen giovenko guhjy balicea tmmurali Borelli jwdietrich frohike bootsy nedwards roys mclarenv phoenixzxl brianb schuylrp jfr paolomarcatili gracio thomaskelder ptrobajo raiyar zwang
	From pull-down data to protein interaction networks and com-plexes with biological relevance. [My Copy] Bioinformatics (26 February 2008) by Bing Zhang, Byung-Hoon H. Park, Tatiana Karpinets, Nagiza F F. Samatova posted by 5 people guhjy chad_davis grahamc kluck carlk
	Microarray data analysis and mining approaches [My Copy] Brief Funct Genomic Proteomic (22 January 2008), elm034. by Francesca Cordero, Marco Botta, Raffaele A. Calogero posted by 6 people wowalz akastrin guhjy jfr neveaire fishtank
	Module-based outcome prediction using breast cancer compendia. [My Copy] PLoS ONE, Vol. 2, No. 10. (2007) by M. H. van Vliet, C. N. Klijn, L. F. Wessels, M. J. Reinders posted by 5 people Zephyrus winterschlaefer jfr macavity1g ptrobajo
	Supervised reconstruction of biological networks with local models [My Copy] Bioinformatics, Vol. 23, No. 13. (1 July 2007), pp. i57-65. by Kevin Bleakley, Gerard Biau, Jean-Philippe Vert posted by 4 people seb1 ptrobajo anf shigepong
	Mining gene expression profiles: expression signatures as cancer phenotypes [My Copy] Nature Reviews Genetics, Vol. 8, No. 8. (03 July 2007), pp. 601-609. by Joseph R. Nevins, Anil Potti posted by 20 people songpku ipark-kaist jmstat daforerog Scis0000002 zufar Roswell Cancer Crosstalk Zephyrus fhalbrit balicea misonneh srp33 jfr guhjy rdiaz giovanni cabbagezs GeschwindLab dbae minostro
	Network-based prediction of protein function [My Copy] Molecular Systems Biology, Vol. 3 (13 March 2007) by Roded Sharan, Igor Ulitsky, Ron Shamir posted by 26 people cerca ptrobajo kiekyon AbnerCYH roys jwhitney dragonrez Sonix mtaschuk babakap phoenixzxl druvus pengchy jjray cmmorel wnpx julius mikaelhuss massivemayhem cjeans iris_2001 karfunkel SysbioMPI-TCells mingzhi ellakat carlk
	Towards reconstruction of gene networks from expression data by supervised learning [My Copy] Genome Biology, Vol. 4, No. 1. (2003) by Lev Soinov, Maria Krestyaninova, Alvis Brazma posted by 1 person jhatrimatri
	GenMax: An Efficient Algorithm for Mining Maximal Frequent Itemsets [My Copy] Data Mining and Knowledge Discovery, Vol. 11, No. 3. (November 2005), pp. 223-242. by Karam Gouda, Mohammed Zaki posted by 2 people coutinho Speed
	Local modeling of global interactome networks. [My Copy] Bioinformatics (Oxford, England), Vol. 21, No. 17. (1 September 2005), pp. 3548-3557. by Denise Scholtens, Marc Vidal, Robert Gentleman posted by 3 people lwaldron cerca nirfriedman
	Whole-proteome prediction of protein function via graph-theoretic analysis of interaction maps. [My Copy] Bioinformatics, Vol. 21 Suppl 1 (1 June 2005) by E. Nabieva, K. Jim, A. Agarwal, B. Chazelle, M. Singh posted by 10 people tmmurali okarsligil lfriedl wnpx j3xucite kdl Bioinformatics jiny Pao-Yang carlk
	Protein interaction networks from yeast to human. [My Copy] Current opinion in structural biology, Vol. 14, No. 3. (June 2004), pp. 292-299. by Peer Bork, Lars J. Jensen, Christian von Mering, Arun K. Ramani, Insuk Lee, Edward M. Marcotte posted by 10 people aelef jiny kuhn koller grahamc cjeans lpfernandes selrac Evangelia larsjuhljensen
	Exact stochastic simulation of coupled chemical reactions with delays [My Copy] The Journal of Chemical Physics, Vol. 126, No. 12. (2007), 124108. by Xiaodong Cai posted by 1 person ekostem
	Association studies in candidate genes: strategies to select SNPs to be tested. [My Copy] Human heredity, Vol. 56, No. 4. (2003), pp. 151-159. by E. Cousin, E. Genin, S. Mace, et al.S. Ricard, C. Chansac, M. del Zompo, J. F. Deleuze posted by 1 person ekostem
	A Full-Likelihood Method for the Evaluation of Causality of Sequence Variants from Family Data [My Copy] Vol. 73, No. 3. (1 September 2003), pp. 652-655. by Deborah Thompson, Douglas F. Easton, David E. Goldgar posted by 1 person ekostem
	Rapid and accurate multiple testing correction and power estimation for millions of correlated markers. [My Copy] PLoS genetics, Vol. 5, No. 4. (17 April 2009), e1000456. by Buhm Han, Hyun Min M. Kang, Eleazar Eskin posted by 12 people xingxu brianb nuin buyske ekostem jdbowes guhjy psique ptrobajo emptyhb rdiaz djkt