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	A genome-wide association study identifies alleles in FGFR2 associated with risk of sporadic postmenopausal breast cancer [My Copy] Nature Genetics, Vol. 39, No. 7. (27 May 2007), pp. 870-874. by David J. Hunter, Peter Kraft, Kevin B. Jacobs, et al.David G. Cox, Meredith Yeager, Susan E. Hankinson, Sholom Wacholder, Zhaoming Wang, Robert Welch, Amy Hutchinson, Junwen Wang, Kai Yu, Nilanjan Chatterjee, Nick Orr, Walter C. Willett, Graham A. Colditz, Regina G. Ziegler, Christine D. Berg, Saundra S. Buys, Catherine A. Mccarty, Heather S. Feigelson, Eugenia E. Calle, Michael J. Thun, Richard B. Hayes, Margaret Tucker, Daniela S. Gerhard, Joseph F. Fraumeni, Robert N. Hoover, Gilles Thomas, Stephen J. Chanock posted by 5 people songpku alisondunning jfr rdiaz caseybrown
	Supervised risk predictor of breast cancer based on intrinsic subtypes. [My Copy] Journal of clinical oncology : official journal of the American Society of Clinical Oncology, Vol. 27, No. 8. (10 March 2009), pp. 1160-1167. by Joel S. Parker, Michael Mullins, Maggie C. Cheang, et al.Samuel Leung, David Voduc, Tammi Vickery, Sherri Davies, Christiane Fauron, Xiaping He, Zhiyuan Hu, John F. Quackenbush, Inge J. Stijleman, Juan Palazzo, J. S. Marron, Andrew B. Nobel, Elaine Mardis, Torsten O. Nielsen, Matthew J. Ellis, Charles M. Perou, Philip S. Bernard posted by 3 people misonneh ptrobajo jfr
	Molecular signatures of neoadjuvant endocrine therapy for breast cancer: characteristics of response or intrinsic resistance. [My Copy] Breast cancer research and treatment, Vol. 112, No. 3. (9 December 2008), pp. 475-488. by Djuana M. Harvell, Nicole S. Spoelstra, Meenakshi Singh, et al.James L. McManaman, Christina Finlayson, Tzu Phang, Susan Trapp, Lawrence Hunter, Wendy W. Dye, Virginia F. Borges, Anthony Elias, Kathryn B. Horwitz, Jennifer K. Richer posted by 2 people misonneh jfr
	Twenty-year follow-up of the Royal Marsden randomized, double-blinded tamoxifen breast cancer prevention trial. [My Copy] J Natl Cancer Inst, Vol. 99, No. 4. (21 February 2007), pp. 283-290. by T. J. Powles, S. Ashley, A. Tidy, I. E. Smith, M. Dowsett posted by 2 people misonneh jfr
	Diverse gene expression and DNA methylation profiles correlate with differential adaptation of breast cancer cells to the antiestrogens tamoxifen and fulvestrant. [My Copy] Cancer Res, Vol. 66, No. 24. (15 December 2006), pp. 11954-11966. by M. Fan, P. S. Yan, C. Hartman-Frey, et al.L. Chen, H. Paik, S. L. Oyer, J. D. Salisbury, A. S. Cheng, L. Li, P. H. Abbosh, T. H. Huang, K. P. Nephew posted by 3 people tonamswish misonneh jfr
	Mapping geographic zones of cancer risk with epigenetic biomarkers in normal breast tissue. [My Copy] Clin Cancer Res, Vol. 12, No. 22. (15 November 2006), pp. 6626-6636. by P. S. Yan, C. Venkataramu, A. Ibrahim, et al.J. C. Liu, R. Z. Shen, N. M. Diaz, B. Centeno, F. Weber, Y. W. Leu, C. L. Shapiro, C. Eng, T. J. Yeatman, T. H. Huang posted by 2 people misonneh jfr
	Interacting models of cooperative gene regulation. [My Copy] Proc Natl Acad Sci U S A, Vol. 101, No. 46. (16 November 2004), pp. 16234-16239. by D. Das, N. Banerjee, M. Q. Zhang posted by 5 people roys misonneh jfr Ao_Li2007 lambda
	Twenty bone-mineral-density loci identified by large-scale meta-analysis of genome-wide association studies. [My Copy] Nature genetics, Vol. 41, No. 11. (04 November 2009), pp. 1199-1206. by Fernando Rivadeneira, Unnur Styrkársdottir, Karol Estrada, et al.Bjarni V. Halldórsson, Yi-Hsiang H. Hsu, J. Brent Richards, M. Carola Zillikens, Fotini K. Kavvoura, Najaf Amin, Yurii S. Aulchenko, L. Adrienne Cupples, Panagiotis Deloukas, Serkalem Demissie, Elin Grundberg, Albert Hofman, Augustine Kong, David Karasik, Joyce B. van Meurs, Ben Oostra, Tomi Pastinen, Huibert A. Pols, Gunnar Sigurdsson, Nicole Soranzo, Gudmar Thorleifsson, Unnur Thorsteinsdottir, Frances M. Williams, Scott G. Wilson, Yanhua Zhou, Stuart H. Ralston, Cornelia M. van Duijn, Timothy Spector, Douglas P. Kiel, Kari Stefansson, John P. Ioannidis, André G. Uitterlinden, Genetic Factors for Osteoporosis (GEFOS) Consortium posted by 4 people songpku aocronin dchughes misonneh
	Environment-mediated drug resistance: a major contributor to minimal residual disease [My Copy] Nat Rev Cancer, Vol. 9, No. 9. (September 2009), pp. 665-674. by Mark B. Meads, Robert A. Gatenby, William S. Dalton posted by 2 people songpku misonneh
	Biological determinants of endocrine resistance in breast cancer [My Copy] Nat Rev Cancer, Vol. 9, No. 9. (September 2009), pp. 631-643. by Elizabeth A. Musgrove, Robert L. Sutherland posted by 2 people songpku misonneh
	microRNA miR-196a-2 and Breast Cancer: A Genetic and Epigenetic Association Study and Functional Analysis [My Copy] Cancer Res, Vol. 69, No. 14. (15 July 2009), pp. 5970-5977. by Aaron E. Hoffman, Tongzhang Zheng, Chunhui Yi, et al.Derek Leaderer, Joanne Weidhaas, Frank Slack, Yawei Zhang, Trupti Paranjape, Yong Zhu posted by 3 people songpku MGEL Reading misonneh
	MicroRNA involvement in the pathogenesis and management of breast cancer [My Copy] J Clin Pathol, Vol. 62, No. 5. (1 May 2009), pp. 422-428. by S. M. Khoshnaw, A. R. Green, D. G. Powe, I. O. Ellis posted by 4 people microRNA tonamswish misonneh songpku
	Pharmacoepigenetics: Its Role in Interindividual Differences in Drug Response. [My Copy] Clinical pharmacology and therapeutics (25 February 2009) by A Gomez, M Ingelman-Sundberg posted by 2 people songpku misonneh
	Endogenous sex hormones and prostate cancer: a collaborative analysis of 18 prospective studies. [My Copy] Journal of the National Cancer Institute, Vol. 100, No. 3. (6 February 2008), pp. 170-183. by , A. W. Roddam, N. E. Allen, P. Appleby, T. J. Key posted by 2 people songpku misonneh
	Common germline genetic variation in antioxidant defense genes and survival after diagnosis of breast cancer. [My Copy] Journal of clinical oncology : official journal of the American Society of Clinical Oncology, Vol. 25, No. 21. (20 July 2007), pp. 3015-3023. by M. Udler, A. T. Maia, A. Cebrian, et al.C. Brown, D. Greenberg, M. Shah, C. Caldas, A. Dunning, D. Easton, B. Ponder, P. Pharoah posted by 2 people songpku misonneh
	Breast cancer treatment outcome with adjuvant tamoxifen relative to patient CYP2D6 and CYP2C19 genotypes. [My Copy] Journal of clinical oncology : official journal of the American Society of Clinical Oncology, Vol. 25, No. 33. (20 November 2007), pp. 5187-5193. by W. Schroth, L. Antoniadou, P. Fritz, et al.M. Schwab, T. Muerdter, U. M. Zanger, W. Simon, M. Eichelbaum, H. Brauch posted by 2 people songpku misonneh
	Influence of cytochrome P450 polymorphisms on drug therapies: Pharmacogenetic, pharmacoepigenetic and clinical aspects. [My Copy] Pharmacol Ther, Vol. 116, No. 3. (December 2007), pp. 496-526. by M. Ingelman-Sundberg, S. C. Sim, A. Gomez, C. Rodriguez-Antona posted by 2 people songpku misonneh
	The role of genetic variability in drug metabolism pathways in breast cancer prognosis. [My Copy] Pharmacogenomics, Vol. 7, No. 4. (June 2006), pp. 613-624. by J. Y. Choi, S. A. Nowell, J. G. Blanco, C. B. Ambrosone posted by 2 people songpku misonneh
	The natural history of ductal carcinoma in situ of the breast: a review [My Copy] Breast Cancer Research and Treatment, Vol. 97, No. 2. (May 2006), pp. 135-144. by Erbas, Bircan, Provenzano, et al. Elena, Armes, Jane, Gertig, Dorota posted by 2 people songpku misonneh
	Bladder Cancer Predisposition: A Multigenic Approach to DNA-Repair and Cell-Cycle-Control Genes. [My Copy] Am J Hum Genet, Vol. 78, No. 3. (March 2006), pp. 464-479. by X. Wu, J. Gu, H. B. Grossman, et al.C. I. Amos, C. Etzel, M. Huang, Q. Zhang, R. E. Millikan, S. Lerner, C. P. Dinney, M. R. Spitz posted by 3 people songpku misonneh Run7
	Host genetics influence tumour metastasis. [My Copy] Nature reviews. Cancer, Vol. 6, No. 2. (February 2006), pp. 141-146. by Kent Hunter posted by 2 people songpku misonneh
	Joint estimation of copy number variation and reference intensities on multiple DNA arrays using GADA. [My Copy] Bioinformatics (Oxford, England), Vol. 25, No. 10. (15 May 2009), pp. 1223-1230. by R. Pique-Regi, A. Ortega, S. Asgharzadeh posted by 6 people jfr guhjy jsatkosk humburg pkonings rdiaz
	Smoothing waves in array CGH tumor profiles [My Copy] Bioinformatics, Vol. 25, No. 9. (1 May 2009), pp. 1099-1104. by Mark A. van de Wiel, Rebecca Brosens, Paul H. C. Eilers, et al.Candy Kumps, Gerrit A. Meijer, Bjorn Menten, Erik Sistermans, Frank Speleman, Marieke E. Timmerman, Bauke Ylstra posted by 5 people jfr nuin lwaldron pkonings rdiaz
	Ultrasome: efficient aberration caller for copy number studies of ultra-high resolution. [My Copy] Bioinformatics (Oxford, England), Vol. 25, No. 8. (15 April 2009), pp. 1078-1079. by Björn Nilsson, Mikael Johansson, Fatima Al-Shahrour, Anne E. Carpenter, Benjamin L. Ebert posted by 4 people jfr daed rdiaz pkonings
	Extensive genomic copy number variation in embryonic stem cells [My Copy] Proceedings of the National Academy of Sciences, Vol. 105, No. 45. (11 November 2008), pp. 17453-17456. by Qi Liang, Nathalie Conte, William C. Skarnes, Allan Bradley posted by 3 people jfr rdiaz pkonings
	dbSMR: a novel resource of genome-wide SNPs affecting microRNA mediated regulation [My Copy] BMC Bioinformatics, Vol. 10, No. 1. (2009), 108. by Manoj Hariharan, Vinod Scaria, Samir Brahmachari posted by 9 people heliopais microRNA jfr songpku guhjy pengchy daforerog lwaldron ealloza
	MicroRNA-221/222 Confers Tamoxifen Resistance in Breast Cancer by Targeting p27Kip1 [My Copy] Journal of Biological Chemistry, Vol. 283, No. 44. (31 October 2008), pp. 29897-29903. by Tyler E. Miller, Kalpana Ghoshal, Bhuvaneswari Ramaswamy, et al.Satavisha Roy, Jharna Datta, Charles L. Shapiro, Samson Jacob, Sarmila Majumder posted by 3 people songpku microRNA jfr
	Meta-analysis of breast cancer microarray studies in conjunction with conserved cis-elements suggest patterns for coordinate regulation. [My Copy] BMC bioinformatics, Vol. 9, No. 1. (2008) by David D. Smith, Pål Saetrom, Ola Snøve, et al.Cathryn Lundberg, Guillermo E. Rivas, Carlotta Glackin, Garrett P. Larson posted by 8 people songpku daforerog shikin shigepong microRNA heliopais xili03 jfr
	A miR-24 microRNA binding-site polymorphism in dihydrofolate reductase gene leads to methotrexate resistance. [My Copy] Proc Natl Acad Sci U S A (8 August 2007) by Prasun J J. Mishra, Rita Humeniuk, Pravin J J. Mishra, Giuseppe S A S. Longo-Sorbello, Debabrata Banerjee, Joseph R R. Bertino posted by 6 people songpku daforerog jfr andersbj Bioinformatics microRNA
	Genome-wide association study identifies novel breast cancer susceptibility loci [My Copy] Nature (27 May 2007) by Douglas F. Easton, Karen A. Pooley, Alison M. Dunning, et al.Paul D. P. Pharoah, Deborah Thompson, Dennis G. Ballinger, Jeffery P. Struewing, Jonathan Morrison, Helen Field, Robert Luben, Nicholas Wareham, Shahana Ahmed, Catherine S. Healey, Richard Bowman, Kerstin B. Meyer, Christopher A. Haiman, Laurence K. Kolonel, Brian E. Henderson, Loic Le Marchand, Paul Brennan, Suleeporn Sangrajrang, Valerie Gaborieau, Fabrice Odefrey, Chen-Yang Shen, Pei-Ei Wu, Hui-Chun Wang, Diana Eccles, Gareth D. Evans, Julian Peto, Olivia Fletcher, Nichola Johnson, Sheila Seal, Michael R. Stratton, Nazneen Rahman, Georgia Chenevix-Trench, Stig E. Bojesen, Børge G. Nordestgaard, Christen K. Axelsson, Montserrat Garcia-Closas, Louise Brinton, Stephen Chanock, Jolanta Lissowska, Beata Peplonska, Heli Nevanlinna, Rainer Fagerholm, Hannaleena Eerola, Daehee Kang, Keun-Young Yoo, Dong-Young Noh, Sei-Hyun Ahn, David J. Hunter, Susan E. Hankinson, David G. Cox, Per Hall, Sara Wedren, Jianjun Liu, Yen-Ling Low, Natalia Bogdanova, Peter Schürmann, Thilo Dörk, Rob A. E. M. Tollenaar, Catharina E. Jacobi, Peter Devilee, Jan G. M. Klijn, Alice J. Sigurdson, Michele M. Doody, Bruce H. Alexander, Jinghui Zhang, Angela Cox, Ian W. Brock, Gordon Macpherson, Malcolm W. R. Reed, Fergus J. Couch, Ellen L. Goode, Janet E. Olson, Hanne Meijers-Heijboer, Ans van den Ouweland, André Uitterlinden, Fernando Rivadeneira, Roger L. Milne, Gloria Ribas, Anna Gonzalez-Neira, Javier Benitez, John L. Hopper, Margaret Mccredie, Melissa Southey, Graham G. Giles, Chris Schroen, Christina Justenhoven, Hiltrud Brauch, Ute Hamann, Yon-Dschun Ko, Amanda B. Spurdle, Jonathan Beesley, Xiaoqing Chen, Arto Mannermaa, Veli-Matti Kosma, Vesa Kataja, Jaana Hartikainen, Nicholas E. Day, David R. Cox, Bruce A. J. Ponder posted by 10 people songpku Terkko jfr joepickrell cat_worth structural_bioinformatics caseybrown xingxu jo_davies srp33
	Human polymorphism at microRNAs and microRNA target sites. [My Copy] Proceedings of the National Academy of Sciences of the United States of America, Vol. 104, No. 9. (27 February 2007), pp. 3300-3305. by Matthew A. Saunders, Han Liang, Wen-Hsiung H. Li posted by 10 people guhjy fishtank songpku daforerog jfr dchughes microRNA G4ID Genetics-of-Gambling heliopais
	PolymiRTS Database: linking polymorphisms in microRNA target sites with complex traits. [My Copy] Nucleic Acids Res (6 December 2006) by Lei Bao, Mi Zhou, Ligang Wu, et al.Lu Lu, Dan Goldowitz, Robert W W. Williams, Yan Cui posted by 5 people songpku jfr Ayest Bioinformatics maralena
	Genomic signatures to guide the use of chemotherapeutics [My Copy] Nature Medicine, Vol. 12, No. 11. (22 October 2006), pp. 1294-1300. by Anil Potti, Holly K. Dressman, Andrea Bild, et al.Richard F. Riedel, Gina Chan, Robyn Sayer, Janiel Cragun, Hope Cottrill, Michael J. Kelley, Rebecca Petersen, David Harpole, Jeffrey Marks, Andrew Berchuck, Geoffrey S. Ginsburg, Phillip Febbo, Johnathan Lancaster, Joseph R. Nevins posted by 11 people ipark-kaist songpku guhjy kengg giovanni frohike mgaldzic GeschwindLab CHIP Plantandetc jfr
	Optimized high-throughput microRNA expression profiling provides novel biomarker assessment of clinical prostate and breast cancer biopsies. [My Copy] Molecular cancer, Vol. 5 (19 June 2006), 24. by Michael D. Mattie, Christopher C. Benz, Jessica Bowers, et al.Kelly Sensinger, Linda Wong, Gary K. Scott, Vita Fedele, David Ginzinger, Robert Getts, Chris Haqq posted by 2 people songpku jfr
	Oncomirs - microRNAs with a role in cancer. [My Copy] Nature reviews. Cancer, Vol. 6, No. 4. (April 2006), pp. 259-269. by Aurora Esquela-Kerscher, Frank J. Slack posted by 20 people songpku giovenko fishtank myzhang abhattac vvoorr guhjy marcius eckart_bindewald xico dchughes cdawson ealloza WetBiology G4ID BioinfoCIPF SGU-CIPF GIG Genetics-of-Gambling jfr
	Microarray-based, high-throughput gene expression profiling of microRNAs. [My Copy] Nature methods, Vol. 1, No. 2. (November 2004), pp. 155-161. by Peter T. Nelson, Don A. Baldwin, L. Marie Scearce, J. Carl Oberholtzer, John W. Tobias, Zissimos Mourelatos posted by 4 people songpku jfr tardigrade mtagaya
	MicroRNA expression profiles classify human cancers [My Copy] Nature, Vol. 435, No. 7043. (09 June 2005), pp. 834-838. by Jun Lu, Gad Getz, Eric A. Miska, et al.Ezequiel Alvarez-Saavedra, Justin Lamb, David Peck, Alejandro Sweet-Cordero, Benjamin L. Ebert, Raymond H. Mak, Adolfo A. Ferrando, James R. Downing, Tyler Jacks, H. Robert Horvitz, Todd R. Golub posted by 18 people songpku tibbitts abhattac cswinburne jfr tmmurali ajeffs tuck mtagaya ealloza frohike Bioinformatics capitall maralena giovenko srp33 microRNA zhouyu
	Singapore Genome Variation Project: A haplotype map of three Southeast Asian populations. [My Copy] Genome research, Vol. 19, No. 11. (29 September 2009), pp. 2154-2162. by Yik-Ying Y. Teo, Xueling Sim, Rick T. Ong, et al.Adrian K. Tan, Jieming Chen, Erwin Tantoso, Kerrin S. Small, Chee-Seng S. Ku, Edmund J. Lee, Mark Seielstad, Kee-Seng S. Chia posted by 5 people jasontsai daforerog djkt misonneh pkonings
	Genome-Wide Association Studies Provoke Debate and a New Look at Strategy [My Copy] J. Natl. Cancer Inst., Vol. 101, No. 15. (5 August 2009), pp. 1041-1043. by Rabiya S. Tuma posted by 3 people pkonings MGEL Reading misonneh
	A large-scale genome-wide association study of Asian populations uncovers genetic factors influencing eight quantitative traits. [My Copy] Nature genetics, Vol. 41, No. 5. (May 2009), pp. 527-534. by Yoon Shin S. Cho, Min Jin J. Go, Young Jin J. Kim, et al.Jee Yeon Y. Heo, Ji Hee H. Oh, Hyo-Jeong J. Ban, Dankyu Yoon, Mi Hee H. Lee, Dong-Joon J. Kim, Miey Park, Seung-Hun H. Cha, Jun-Woo W. Kim, Bok-Ghee G. Han, Haesook Min, Younjhin Ahn, Man Suk S. Park, Hye Ree R. Han, Hye-Yoon Y. Jang, Eun Young Y. Cho, Jong-Eun E. Lee, Nam H. Cho, Chol Shin, Taesung Park, Ji Wan W. Park, Jong-Keuk K. Lee, Lon Cardon, Geraldine Clarke, Mark I. McCarthy, Jong-Young Y. Lee, Jong-Koo K. Lee, Bermseok Oh, Hyung-Lae L. Kim posted by 7 people MGEL Reading misonneh RockmanLab dpollard guhjy xingxu pkonings
	Pharmacogenomics -- Drug Disposition, Drug Targets, and Side Effects [My Copy] N Engl J Med, Vol. 348, No. 6. (6 February 2003), pp. 538-549. by William E. Evans, Howard L. Mcleod posted by 3 people misonneh pkonings srp33
	De novo copy number variants identify new genes and loci in isolated sporadic tetralogy of Fallot. [My Copy] Nature genetics, Vol. 41, No. 8. (August 2009), pp. 931-935. by Steven C. Greenway, Alexandre C. Pereira, Jennifer C. Lin, et al.Steven R. DePalma, Samuel J. Israel, Sonia M. Mesquita, Emel Ergul, Jessie H. Conta, Joshua M. Korn, Steven A. McCarroll, Joshua M. Gorham, Stacey Gabriel, David M. Altshuler, Maria de Lourdes d. e. . L. Quintanilla-Dieck, Maria Alexandra A. Artunduaga, Roland D. Eavey, Robert M. Plenge, Nancy A. Shadick, Michael E. Weinblatt, Philip L. De Jager, David A. Hafler, Roger E. Breitbart, Jonathan G. Seidman, Christine E. Seidman posted by 2 people rdiaz misonneh
	Exploring the human genome with functional maps [My Copy] Genome Research, Vol. 19, No. 6. (1 June 2009), pp. 1093-1106. by Curtis Huttenhower, Erin M. Haley, Matthew A. Hibbs, et al.Vanessa Dumeaux, Daniel R. Barrett, Hilary A. Coller, Olga G. Troyanskaya posted by 10 people jfr ptrobajo daforerog fenghezi shikin idoerg guhjy pinney grahamc pkonings
	MAGETabulator, a suite of tools to support the microarray data format MAGE-TAB. [My Copy] Bioinformatics (Oxford, England), Vol. 25, No. 2. (15 January 2009), pp. 279-280. by T. F. Rayner, F. I. Rezwan, M. Lukk, et al.X. Z. Bradley, A. Farne, E. Holloway, J. Malone, E. Williams, H. Parkinson posted by 5 people guhjy jfr Bioinformatics dswan pkonings
	Gradient lasso for Cox proportional hazards model [My Copy] Bioinformatics, Vol. 25, No. 14. (15 July 2009), pp. 1775-1781. by Insuk Sohn, Jinseog Kim, Sin-Ho Jung, Changyi Park posted by 4 people jfr rdiaz reconnie neils
	Evaluation of microarray preprocessing algorithms based on concordance with RT-PCR in clinical samples. [My Copy] PloS one, Vol. 4, No. 5. (21 May 2009), e5645. by Balazs Gyorffy, Bela Molnar, Hermann Lage, Zoltan Szallasi, Aron C. Eklund posted by 3 people jfr rdiaz bertelsen
	Automated high-dimensional flow cytometric data analysis [My Copy] Proceedings of the National Academy of Sciences, Vol. 106, No. 21. (26 May 2009), pp. 8519-8524. by Saumyadipta Pyne, Xinli Hu, Kui Wang, et al.Elizabeth Rossin, Tsung-I Lin, Lisa M. Maier, Clare Baecher-Allan, Geoffrey J. Mclachlan, Pablo Tamayo, David A. Hafler, Philip L. De Jager, Jill P. Mesirov posted by 6 people jfr rdiaz guhjy vplagnol aheilbut surajitray
	Model-based clustering of array CGH data [My Copy] Bioinformatics, Vol. 25, No. 12. (15 June 2009), pp. i30-38. by Sohrab P. Shah, K-John Cheung, Nathalie A. Johnson, et al.Guillaume Alain, Randy D. Gascoyne, Douglas E. Horsman, Raymond T. Ng, Kevin P. Murphy posted by 6 people jfr jonilaserson dolchan rdiaz kdpreter nuin
	Constrained mixture estimation for analysis and robust classification of clinical time series [My Copy] Bioinformatics, Vol. 25, No. 12. (15 June 2009), pp. i6-14. by Ivan G. Costa, Alexander Schonhuth, Christoph Hafemeister, Alexander Schliep posted by 3 people jfr rdiaz sotacam
	A Classifier-based approach to identify genetic similarities between diseases [My Copy] Bioinformatics, Vol. 25, No. 12. (15 June 2009), pp. i21-29. by Marc A. Schaub, Irene M. Kaplow, Marina Sirota, Chuong B. Do, Atul J. Butte, Serafim Batzoglou posted by 5 people jfr zufar rdiaz ddunbar djkt
	Fewer permutations, more accurate P-values [My Copy] Bioinformatics, Vol. 25, No. 12. (15 June 2009), pp. i161-168. by Theo A. Knijnenburg, Lodewyk F. A. Wessels, Marcel J. T. Reinders, Ilya Shmulevich posted by 12 people heliopais jfr rdiaz Ayest farhat Journal picks AlexBateman bmajoros idonaldson TRHvidsten djkt sameersoi
	Hierarchical hidden Markov model with application to joint analysis of ChIP-chip and ChIP-seq data. [My Copy] Bioinformatics (Oxford, England), Vol. 25, No. 14. (15 July 2009), pp. 1715-1721. by Hyungwon Choi, Alexey I. Nesvizhskii, Debashis Ghosh, Zhaohui S. Qin posted by 14 people jfr tonamswish rdiaz fpattyn Journal picks jcbarret guhjy hendrik85 inesdesantiago nklee polivares ewilban1 idonaldson humburg
	Intra-Platform Repeatability and Inter-Platform Comparability of MicroRNA Microarray Technology [My Copy] PLoS ONE, Vol. 4, No. 5. (14 May 2009), e5540. by Fumiaki Sato, Soken Tsuchiya, Kazuya Terasawa, Gozoh Tsujimoto posted by 6 people microRNA jfr fishtank rdiaz guhjy daforerog
	FDR made easy in differential feature discovery and correlation analyses [My Copy] Bioinformatics, Vol. 25, No. 11. (1 June 2009), pp. 1461-1462. by Xuefeng B. Ling, Harvey Cohen, Joseph Jin, Irwin Lau, James Schilling posted by 8 people heliopais jfr rdiaz fishtank brianb nuin idonaldson guhjy
	ViaComplex: software for landscape analysis of gene expression networks in genomic context [My Copy] Bioinformatics, Vol. 25, No. 11. (1 June 2009), pp. 1468-1469. by Mauro A. A. Castro, Jose L. Filho, Rodrigo J. S. Dalmolin, et al.Marialva Sinigaglia, Jose C. F. Moreira, Jose C. M. Mombach, Rita M. C. de Almeida posted by 4 people jfr guhjy renatomilani rdiaz
	Molecular classification of solid tumours: towards pathway-driven therapeutics. [My Copy] British journal of cancer, Vol. 100, No. 10. (19 May 2009), pp. 1517-1522. by C. Swanton, C. Caldas posted by 6 people jfr rdiaz tonamswish guhjy xtizon giovenko
	Association of survival and disease progression with chromosomal instability: A genomic exploration of colorectal cancer [My Copy] Proceedings of the National Academy of Sciences, Vol. 106, No. 17. (28 April 2009), pp. 7131-7136. by Michal Sheffer, Manny D. Bacolod, Or Zuk, et al.Sarah F. Giardina, Hanna Pincas, Francis Barany, Philip B. Paty, William L. Gerald, Daniel A. Notterman, Eytan Domany posted by 3 people jfr kdpreter rdiaz
	DNA copy number profiles of primary tumors as predictors of response to chemotherapy in advanced colorectal cancer. [My Copy] Annals of oncology : official journal of the European Society for Medical Oncology / ESMO (15 January 2009) by C Postma, M Koopman, T E E. Buffart, et al.P P P. Eijk, B Carvalho, G J J. Peters, B Ylstra, J H H. van Krieken, C J A J. Punt, G A A. Meijer posted by 2 people rdiaz jfr
	Integrated functional, gene expression and genomic analysis for the identification of cancer targets. [My Copy] PloS one, Vol. 4, No. 4. (9 April 2009), e5120. by Elizabeth Iorns, Christopher J. Lord, Anita Grigoriadis, et al.Sarah McDonald, Kerry Fenwick, Alan Mackay, Charles A. Mein, Rachael Natrajan, Kay Savage, Narinder Tamber, Jorge S. Reis-Filho, Nicholas C. Turner, Alan Ashworth posted by 3 people jfr rdiaz roys
	Data structures and algorithms for analysis of genetics of gene expression with Bioconductor: GGtools 3.x [My Copy] Bioinformatics, Vol. 25, No. 11. (1 June 2009), pp. 1447-1448. by Vincent J. Carey, Adam R. Davis, Michael F. Lawrence, Robert Gentleman, Benjamin A. Raby posted by 7 people jfr guhjy druvus nuin rdiaz djkt giovanni
	Copy number alterations that predict metastatic capability of human breast cancer. [My Copy] Cancer research, Vol. 69, No. 9. (1 May 2009), pp. 3795-3801. by Yi Zhang, John W. Martens, Jack X. Yu, et al.John Jiang, Anieta M. Sieuwerts, Marcel Smid, Jan G. Klijn, Yixin Wang, John A. Foekens posted by 5 people jfr giovenko frohike kdpreter rdiaz
	Inferring clonal expansion and cancer stem cell dynamics from DNA methylation patterns in colorectal cancers. [My Copy] Proceedings of the National Academy of Sciences of the United States of America, Vol. 106, No. 12. (24 March 2009), pp. 4828-4833. by Kimberly D. Siegmund, Paul Marjoram, Yen-Jung J. Woo, Simon Tavaré, Darryl Shibata posted by 4 people jfr ajaymalik myzhang rdiaz
	SIMoNe: Statistical Inference for MOdular NEtworks [My Copy] Bioinformatics, Vol. 25, No. 3. (1 February 2009), pp. 417-418. by Julien Chiquet, Alexander Smith, Gilles Grasseau, Catherine Matias, Christophe Ambroise posted by 2 people jfr rdiaz
	Analysis of Gene Sets Based on the Underlying Regulatory Network [My Copy] Journal of Computational Biology, Vol. 16, No. 3. (March 2009), pp. 407-426. by Ali Shojaie, George Michailidis posted by 6 people zufar shikin guhjy Bioinformatics jfr rdiaz
	Biological Convergence of Cancer Signatures [My Copy] PLoS ONE, Vol. 4, No. 2. (20 February 2009), e4544. by Xavier Solé, Núria Bonifaci, Núria López-Bigas, et al.Antoni Berenguer, Pilar Hernández, Oscar Reina, Christopher A. Maxwell, Helena Aguilar, Ander Urruticoechea, Silvia de Sanjosé, Francesc Comellas, Gabriel Capellá, Víctor Moreno, Miguel A. Pujana posted by 3 people jfr frohike rdiaz
	Visualization of genomic data with the Hilbert curve [My Copy] Bioinformatics, Vol. 25, No. 10. (15 May 2009), pp. 1231-1235. by Simon Anders posted by 16 people jfr jandot ewilban1 BergmanLab polivares inesdesantiago djkt behindtherabbit guhjy humburg Thaverkamp svenrahmann jmeppley idonaldson rdiaz paszkows
	The tspair package for finding top scoring pair classifiers in R [My Copy] Bioinformatics, Vol. 25, No. 9. (1 May 2009), pp. 1203-1204. by Jeffrey T. Leek posted by 3 people jfr guhjy rdiaz
	Parallelized prediction error estimation for evaluation of high-dimensional models. [My Copy] Bioinformatics (Oxford, England), Vol. 25, No. 6. (15 March 2009), pp. 827-829. by Christine Porzelius, Harald Binder, Martin Schumacher posted by 4 people jfr rdiaz agomez guhjy
	A modified hyperplane clustering algorithm allows for efficient and accurate clustering of extremely large datasets [My Copy] Bioinformatics, Vol. 25, No. 9. (1 May 2009), pp. 1152-1157. by Ashok Sharma, Robert Podolsky, Jieping Zhao, Richard A. McIndoe posted by 5 people jfr guhjy renatomilani rdiaz nuin
	Biomarker evaluation and comparison using the controls as a reference population [My Copy] Biostatistics, Vol. 10, No. 2., pp. 228-244. by Ying Huang, Margaret Sullivan S. Pepe posted by 3 people guhjy jfr rdiaz
	Array CGH data modeling and smoothing in Stationary Wavelet Packet Transform domain. [My Copy] BMC genomics, Vol. 9 Suppl 2 (2008) by H. Huang, N. Nguyen, S. Oraintara, A. Vo posted by 2 people rdiaz jfr
	Multivariate analysis of variance test for gene set analysis. [My Copy] Bioinformatics (Oxford, England), Vol. 25, No. 7. (1 April 2009), pp. 897-903. by Chen-An A. Tsai, James J. Chen posted by 8 people jfr guhjy tonamswish natstreet dswan imina rdiaz thomaskelder
	The use of gene ontology evidence codes in preventing classifier assessment bias [My Copy] Bioinformatics, Vol. 25, No. 9. (1 May 2009), pp. 1173-1177. by Mark F. Rogers, Asa Ben-Hur posted by 5 people jfr kshameer vkwn rdiaz dullhunk
	Correlation signature of the macroscopic states of the gene regulatory network in cancer. [My Copy] Proceedings of the National Academy of Sciences of the United States of America, Vol. 106, No. 11. (17 March 2009), pp. 4079-4084. by Nikolai Slavov, Kenneth A. Dawson posted by 7 people zufar fpattyn jfr BTS-PT-AS-CS vertikalist rdiaz provero
	Advanced analysis and visualization of gene copy number and expression data. [My Copy] BMC bioinformatics, Vol. 10 Suppl 1 (2009) by R. Autio, M. Saarela, A. K. Järvinen, S. Hautaniemi, J. Astola posted by 4 people jfr rdiaz Terkko jdbowes
	A method for constructing a confidence bound for the actual error rate of a prediction rule in high dimensions [My Copy] Biostat, Vol. 10, No. 2. (1 April 2009), pp. 282-296. by Kevin K. Dobbin posted by 4 people jfr rdiaz lptolik djkt
	Statistical methods of background correction for Illumina BeadArray data. [My Copy] Bioinformatics (Oxford, England), Vol. 25, No. 6. (15 March 2009), pp. 751-757. by Yang Xie, Xinlei Wang, Michael Story posted by 10 people shikin jfr ptrobajo welliegirl rdiaz Bioinformatics - CRUK Stew heliopais dswan guhjy
	Sparse linear discriminant analysis for simultaneous testing for the significance of a gene set/pathway and gene selection [My Copy] Bioinformatics, Vol. 25, No. 9. (1 May 2009), pp. 1145-1151. by Michael C. Wu, Lingsong Zhang, Zhaoxi Wang, David C. Christiani, Xihong Lin posted by 5 people jfr praisan rdiaz ipark-kaist guhjy
	Prognostic gene signatures for non-small-cell lung cancer [My Copy] Proceedings of the National Academy of Sciences, Vol. 106, No. 8. (24 February 2009), pp. 2824-2828. by Paul C. Boutros, Suzanne K. Lau, Melania Pintilie, et al.Ni Liu, Frances A. Shepherd, Sandy D. Der, Ming-Sound Tsao, Linda Z. Penn, Igor Jurisica posted by 5 people jfr lwaldron rdiaz ipark-kaist provero
	Genomic copy number determination in cancer cells from single nucleotide polymorphism microarrays based on quantitative genotyping corrected for aneuploidy. [My Copy] Genome research, Vol. 19, No. 2. (February 2009), pp. 276-283. by E. F. Attiyeh, S. J. Diskin, M. A. Attiyeh, et al.Y. P. Mossé, C. Hou, E. M. Jackson, C. Kim, J. Glessner, H. Hakonarson, J. A. Biegel, J. M. Maris posted by 5 people jfr absterga rdiaz Koch_Lab skoch3
	A new regularized least squares support vector regression for gene selection [My Copy] BMC Bioinformatics, Vol. 10, No. 1. (03 February 2009), 44. by Pei C. Chen, Su Y. Huang, Wei Chen, Chuhsing Hsiao posted by 5 people dipenps guhjy jfr rdiaz behindtherabbit
	Non-negative matrix factorization of gene expression profiles: a plug-in for BRB-ArrayTools. [My Copy] Bioinformatics (Oxford, England), Vol. 25, No. 4. (15 February 2009), pp. 545-547. by Qihao Qi, Yingdong Zhao, MingChung Li, Richard Simon posted by 3 people jfr rdiaz guhjy
	A genetic programming-based approach to the classification of multiclass microarray datasets [My Copy] Bioinformatics, Vol. 25, No. 3. (1 February 2009), pp. 331-337. by Kun-Hong Liu, Chun-Gui Xu posted by 5 people ptrobajo turnersd jfr rdiaz nuin
	Reference Alignment of SNP Microarray Signals for Copy Number Analysis of Tumors [My Copy] Bioinformatics (3 December 2008), btn624. by Stan Pounds, Cheng Cheng, Charles Mullighan, Susana C. Raimondi, Sheila Shurtleff, James R. Downing posted by 5 people jfr rdiaz Bioinformatics dswan nuin
	Gene expression meta-analysis identifies metastatic pathways and transcription factors in breast cancer [My Copy] BMC Cancer, Vol. 8 (30 December 2008), 394. by Mads, Torben A. Kruse posted by 3 people jfr daforerog rdiaz
	Meta-analysis of expression signatures of muscle atrophy: gene interaction networks in early and late stages [My Copy] BMC Genomics, Vol. 9 (23 December 2008), 630. by Enrica, Chiara Romualdi posted by 2 people jfr rdiaz
	MSB: A mean-shift-based approach for the analysis of structural variation in the genome [My Copy] Genome Research, Vol. 19, No. 1. (26 January 2009), pp. 106-117. by Lu-Yong Wang, Alexej Abyzov, Jan O. Korbel, Michael Snyder, Mark Gerstein posted by 6 people jandot jonilaserson jfr sameersoi rdiaz operon
	Identifying molecular markers associated with classification of genotypes by External Logistic Biplots [My Copy] Bioinformatics (29 October 2008), btn552. by J. R. Demey, J. L. Vicente-Villardon, M. P. Galindo-Villardon, A. Y. Zambrano posted by 2 people jfr rdiaz
	Conditional Random Pattern Algorithm for LOH Inference and Segmentation [My Copy] Bioinformatics (29 October 2008), btn561. by Ling-Yun Wu, Xiaobo Zhou, Fuhai Li, Xiaorong Yang, Chung-Che Chang, Stephen T. Wong posted by 2 people jfr rdiaz
	A competitive hybridization model predicts probe signal intensity on high density DNA microarrays [My Copy] Nucl. Acids Res., Vol. 36, No. 20. (1 November 2008), pp. 6585-6591. by Shuzhao Li, Alex Pozhitkov, Marius Brouwer posted by 4 people bertelsen jfr rdiaz ojabado
	Randomization in Laboratory Procedure Is Key to Obtaining Reproducible Microarray Results [My Copy] PLoS ONE, Vol. 3, No. 11. (14 November 2008), e3724. by Hyuna Yang, Christina A. Harrington, Kristina Vartanian, Christopher D. Coldren, Rob Hall, Gary A. Churchill posted by 5 people jfr rdiaz GeeSharpMinor Bioinformatics sameetmehta
	Feature selection environment for genomic applications [My Copy] BMC Bioinformatics, Vol. 9, No. 1. (22 October 2008), 451. by Fabricio Lopes, David Martins, Roberto Cesar posted by 7 people rdiaz jfr TRHvidsten GustavoG imina lptolik operon
	GEAR: genomic enrichment analysis of regional DNA copy number changes [My Copy] Bioinformatics, Vol. 24, No. 3. (1 February 2008), pp. 420-421. by Tae-Min Kim, Yu-Chae Jung, Mun-Gan Rhyu, Myeong H. Jung, Yeun-Jun Chung posted by 2 people jfr rdiaz
	Segmentation-based detection of allelic imbalance and loss-of-heterozygosity in cancer cells using whole genome SNP arrays [My Copy] Genome Biology, Vol. 9 (16 September 2008), R136. by Johan Staaf, David Lindgren, Johan Vallon-Christersson, et al.Anders Isaksson, Hanna Goransson, Gunnar Juliusson, Richard Rosenquist, Mattias Hoglund, Ake Borg, Markus Ringner posted by 2 people jfr rdiaz
	A fast and flexible method for the segmentation of aCGH data. [My Copy] Bioinformatics (Oxford, England), Vol. 24, No. 16. (15 August 2008) by E. Ben-Yaacov, Y. C. Eldar posted by 7 people noushin daed jfr rdiaz nuin talponer aviad_work
	Classification and feature selection algorithms for multi-class CGH data. [My Copy] Bioinformatics (Oxford, England), Vol. 24, No. 13. (1 July 2008) by J. Liu, S. Ranka, T. Kahveci posted by 3 people rdiaz jfr nuin
	A comprehensive comparison of random forests and support vector machines for microarray-based cancer classification [My Copy] BMC Bioinformatics, Vol. 9 (22 July 2008), 319. by Alexander Statnikov, Lily Wang, Constantin F. Aliferis posted by 6 people ucbcjbm rdiaz jfr rmk mdharsee chad_davis
	A segmental maximum a posteriori approach to genome-wide copy number profiling. [My Copy] Bioinformatics (Oxford, England), Vol. 24, No. 6. (15 March 2008), pp. 751-758. by R. Andersson, C. E. Bruder, A. Piotrowski, et al.U. Menzel, H. Nord, J. Sandgren, T. R. Hvidsten, T. Diaz de Ståhl, J. P. Dumanski, J. Komorowski posted by 2 people rdiaz jfr
	Computational Methods for the Analysis of Array Comparative Genomic Hybridization. [My Copy] Cancer informatics, Vol. 2 (2006), pp. 48-58. by Raj Chari, William W W. Lockwood, Wan L L. Lam posted by 2 people rdiaz jfr
	A probe-density-based analysis method for array CGH data: simulation, normalization and centralization [My Copy] Bioinformatics, Vol. 24, No. 16. (15 August 2008), pp. 1749-1756. by Hung-I H. Chen, Fang-Han Hsu, Yuan Jiang, et al.Mong-Hsun Tsai, Pan-Chyr Yang, Paul S. Meltzer, Eric Y. Chuang, Yidong Chen posted by 7 people stharward noushin rdiaz jfr talponer nuin ellakat