agonzale's Top Recommendations

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	Bioinformatics enrichment tools: paths toward the comprehensive functional analysis of large gene lists [My Copy] Nucl. Acids Res., Vol. 37, No. 1. (1 January 2009), pp. 1-13. by Da W. Huang, Brad T. Sherman, Richard A. Lempicki posted by 47 people darian chasmand hzoltan ipark-kaist giovenko lwaldron jcaddy antonkratz Zephyrus shikin yaredo tonamswish ddunbar robfsouza Keywan daforerog ptrobajo rdiaz bertelsen Bioinformatics - CRUK Stew inesdesantiago heliopais ConklinLab AlexanderPico aviad_work ekotelnikova frohike aramesh2 jfr zufar ilyashl dolchan paszkows lptolik thomaskelder AbnerCYH neils tmmurali ealloza barriot druvus renatomilani pengchy phoenixzxl guhjy sjcockell
	A Quick Guide to Organizing Computational Biology Projects [My Copy] PLoS Comput Biol, Vol. 5, No. 7. (31 July 2009), e1000424. by William S. Noble posted by 68 people annakcroft brianb nuin skembel pekrau Sergey_gerbek mordiano remoteFuture Yanno Pedro Martinez EvoDevo lab Barcelona aaltenburger marekrud guhjy dolchan frohike operon Orengo Group Journal Picks CorinYeats artaban421 antonkratz tomhebbron maren bayesian daveGerrard JoeBanks jcaddy somak bertelsen ptrobajo nperoni daforerog mmwoodman charris5 GustavoLacerda pmendes fgibson rdiaz Zephyrus heliopais franklu310 lmichan silberbauer leemond31 jlangdon robfsouza Bioinformatics - CRUK Stew pmung reyez kshameer djkt pawelsobko jjray dswan apaydin renatomilani VGreiff cabbagesofdoom ccsbs wei_tang fenghezi BergmanLab cisevol structural_bioinformatics McCammon barry sdaehne druvus
	Use and misuse of the gene ontology annotations [My Copy] Nature Reviews Genetics, Vol. 9, No. 7. (13 May 2008), pp. 509-515. by Seung Yon Rhee, Valerie Wood, Kara Dolinski, Sorin Draghici posted by 44 people singhsh epigenetics davidmam Thaverkamp druvus dullhunk 8_01 suizan dolchan Borelli Zephyrus VGreiff klo thomaskelder ilyashl phoenixzxl MarcoAlvarez isakemal bertelsen daforerog jfr djkt guhjy aheilbut mariakmejia cmzmasek A_Olympia logics of knowledge realzhang carlk roys gjuggler fpattyn RamuAnandakrishnan ptrobajo giovenko cabbagesofdoom tmmurali renatomilani capitall marck rvosa FAB-lab bpcusack
	Protein networks in disease. [My Copy] Genome research, Vol. 18, No. 4. (1 April 2008), pp. 644-652. by Trey Ideker, Roded Sharan posted by 28 people shikin carlk isimpson chica saket zufar kaarsinogen giovenko guhjy balicea tmmurali Borelli jwdietrich frohike bootsy nedwards roys mclarenv phoenixzxl brianb schuylrp jfr paolomarcatili gracio thomaskelder ptrobajo raiyar zwang
	The Systems Biology Graphical Notation [My Copy] Nature Biotechnology, Vol. 27, No. 8. (07 August 2009), pp. 735-741. by Nicolas L. Novere, Michael Hucka, Huaiyu Mi, et al.Stuart Moodie, Falk Schreiber, Anatoly Sorokin, Emek Demir, Katja Wegner, Mirit I. Aladjem, Sarala M. Wimalaratne, Frank T. Bergman, Ralph Gauges, Peter Ghazal, Hideya Kawaji, Lu Li, Yukiko Matsuoka, Alice Villeger, Sarah E. Boyd, Laurence Calzone, Melanie Courtot, Ugur Dogrusoz, Tom C. Freeman, Akira Funahashi, Samik Ghosh, Akiya Jouraku, Sohyoung Kim, Fedor Kolpakov, Augustin Luna, Sven Sahle, Esther Schmidt, Steven Watterson, Guanming Wu, Igor Goryanin, Douglas B. Kell, Chris Sander, Herbert Sauro, Jacky L. Snoep, Kurt Kohn, Hiroaki Kitano posted by 42 people singhsh greg tonamswish pablocarb josepe abc623 daforerog abhishek_tiwari Orengo Group Journal Picks robertrentzsch ngehlenborg pekrau thegoose bertelsen fgibson Borelli thomaskelder pmendes dullhunk polivares chasmand brianb roys torfinnnome guhjy Zephyrus lenov reyez allysonlister apocapoc renatomilani VGreiff druvus sjcockell Journal picks jandot megraw leliavski frohike Neuroblastoma fpattyn jhyang
	The Automation of Science [My Copy] Science, Vol. 324, No. 5923. (3 April 2009), pp. 85-89. by Ross D. King, Jem Rowland, Stephen G. Oliver, et al.Michael Young, Wayne Aubrey, Emma Byrne, Maria Liakata, Magdalena Markham, Pinar Pir, Larisa N. Soldatova, Andrew Sparkes, Kenneth E. Whelan, Amanda Clare posted by 60 people yuifu singhsh Sergey_gerbek schwartzjmc yyfwuhan antonkratz CulCog ckai1 jcaddy thegoose tommcdonagh tonamswish qwermish axeltan ocs TobiasAbenius CameronNeylon guhjy davidcsterratt bcondon Scis0000002 kevinemamy TRHvidsten emiko Zephyrus arne muraken vagoskar katiehumphry NaCTeM Effie robertknight acrmartins psique dbikard tyrell_turing Tomste renatomilani subhacom druvus ramanuja sen_cheng coela VGreiff hagechouchin443 Benja austin stober rdiaz Fortran napvasconcelos mikel_egana allysonlister dullhunk fgibson pkonings MetabolicModeling JeremyZucker jbhiatt tmmurali
	Gene set enrichment analysis: A knowledge-based approach for interpreting genome-wide expression profiles [My Copy] Proceedings of the National Academy of Sciences of the United States of America, Vol. 102, No. 43. (25 October 2005), pp. 15545-15550. by Aravind Subramanian, Pablo Tamayo, Vamsi K. Mootha, et al.Sayan Mukherjee, Benjamin L. Ebert, Michael A. Gillette, Amanda Paulovich, Scott L. Pomeroy, Todd R. Golub, Eric S. Lander, Jill P. Mesirov posted by 51 people Jporci gbloeb miskar giovenko greg dolchan pattersonee mhamidi jperkins zufar ptrobajo antonkratz yaredo tmmurali VGreiff daforerog paszkows ipark-kaist bertelsen ajbattle jessopher askrajiv idonaldson ihpark chrisamiller dragonrez jfr balajis maryee xwbcn hpiwowar aviad_work ealloza jdiggans jeremymiller frohike hawkeyehammer schuylrp natstreet Bioinformatics BioinfoCIPF GeschwindLab Indigene heliopais shikin waghsk roys ellakat srp33 sgoetz AbnerCYH
	A Quick Guide to Teaching R Programming to Computational Biology Students [My Copy] PLoS Comput Biol, Vol. 5, No. 8. (28 August 2009), e1000482. by Stephen J. Eglen posted by 67 people nuin kaliczp maren sobolevnrm ltitodem zchen75 artaban421 natstreet jasonn tomhebbron psique Bioinformatics - CRUK Stew eshirdel guhjy polivares ajw fishtank diamantis fastjoe23 kshameer daveGerrard hrogers JoeBanks BergmanLab cisevol srijit hwright Ayest VGreiff welliegirl asadrahman rdiaz ptrobajo heliopais coffeerv Vincent_Rouilly marekrud tnhh barry ansobol Zephyrus walshtp bertelsen fgibson pkonings Borelli klauso dlizcano dswan skembel djkt jclau lwaldron phoenixzxl timhubbard eLearning in Leicester AJCann thegoose dullhunk brianb neils silberbauer daforerog Journal picks ppgardne druvus
	Hierarchical structure and the prediction of missing links in networks [My Copy] Nature, Vol. 453, No. 7191. (01 May 2008), pp. 98-101. by Aaron Clauset, Cristopher Moore, M. E. J. Newman posted by 47 people ipark-kaist carlk gtgt15 saket wei_tang Kovanen diamantis cfelipesp orahcio rcrane kubyaddi pbull Ema jago cmor balicea kengg jjray soramame_0518 deanmalmgren briordan hryk tny AbnerCYH cactus tmmurali akshat bryanhughes gagliol margaritis guhjy craigwilson06 cmmorel eyliu markusd elsantosneto pinney i-stevenson fbaroni nedwards apwesolowski Borelli ptrobajo dpf rds lfriedl sen_cheng
	Geometric interpretation of gene coexpression network analysis. [My Copy] PLoS computational biology, Vol. 4, No. 8. (15 August 2008), e1000117. by Steve Horvath, Jun Dong posted by 23 people jeremymiller zufar dolchan sficklin isimpson rdiaz guhjy cswinburne jfr ptrobajo pengchy nolodie druvus aramesh2 kengg roys Ema tmmurali Borelli Totobox AbnerCYH davidchavalarias caseybrown
	Network Motifs: Simple Building Blocks of Complex Networks [My Copy] Science, Vol. 298, No. 5594. (25 October 2002), pp. 824-827. by R. Milo, S. Shen-Orr, S. Itzkovitz, N. Kashtan, D. Chklovskii, U. Alon posted by 84 people kubyaddi antonkratz jaspervoskuilen complex networks Sergey_gerbek nurban balabu ocs mjoach makrehchi schwartzjmc poirel tomhebbron arsyed vtraag sergiun fierykylin Akimasa operon GEB dlobo daforerog chasmand wei_tang darian orahcio babakap brewbooks phoenixzxl Md_2007 mtagaya heliopais kaarsinogen galyardt cswinburne mullonc camster korakot aalibes ChaTo imouthesmp Borelli lfriedl alexg balicea tny ssb wnpx ddahlem cmm donade neveaire griota gurkanbebek jtaylor josepe iris_2001 michaelmampaey rebeccamancy karfunkel lenov Philosophy_of_Information dbk-lab Blog_and_Wiki_Research kdl FAB-lab ColDyn ADMiRes Evangelia roys tfogal zibuyu maralena stefanoallesina pbull cmor renatomilani shikin GeneGo carlk applesnow subhacom i-stevenson ethkim
	A systems biology approach for pathway level analysis [My Copy] Genome Research, Vol. 17, No. 10. (4 October 2007), pp. 1537-1545. by Sorin Draghici, Purvesh Khatri, Adi L. Tarca, et al.Kashyap Amin, Arina Done, Calin Voichita, Constantin Georgescu, Roberto Romero posted by 25 people zufar bertelsen tonamswish gbloeb cgaugain ptrobajo pengchy tmmurali dragonrez jfr gurkanbebek grahamc shigepong zwang cabbagezs cerami xingxu Bioinformatics shikin idonaldson Pao-Yang OPIG thomaskelder heliopais AlexanderPico
	Unraveling Protein Networks with Power Graph Analysis [My Copy] PLoS Comput Biol, Vol. 4, No. 7. (11 July 2008), e1000108. by Loïc Royer, Matthias Reimann, Bill Andreopoulos, Michael Schroeder posted by 27 people colmryan carlk saket diamantis yyby jfr jiny aramesh2 AbnerCYH jmuhlich MatthiasReimann royerloic Ema lptolik kengg roys reyez tmmurali nuin Borelli askrajiv renatomilani stajich Mycology sebk OPIG rsantana
	Modeling and Simulation of Genetic Regulatory Systems: A Literature Review [My Copy] Journal of Computational Biology, Vol. 9, No. 1. (January 2002), pp. 67-103. by Hidde de Jong posted by 34 people mjoach Borelli qluo antonkratz reyez smac tlse65 wangbo GEB dlobo jago behindtherabbit cswinburne Jarman Lab ggallone softsimu eldan tmmurali bayesian balicea Happybene wnpx kengg noano sstoma josepe dagmar jo_davies VirtualPlants Plantandetc compneur roys maburkitt phoenixzxl
	An introduction to scripting in Ruby for biologists. [My Copy] BMC bioinformatics, Vol. 10, No. 1. (2009), 221. by Jan Aerts, Andy Law posted by 29 people isimpson kshameer n00c Zephyrus nuin sobolevnrm jago lwaldron apaydin natstreet Bioinformatics - CRUK Stew silberbauer mfenner phoenixzxl renatomilani abhishek_tiwari rschulz Journal picks sjcockell dullhunk druvus neils daforerog fgibson leemond31 brianb Bioinformatics dswan
	Disease signatures are robust across tissues and experiments [My Copy] Molecular Systems Biology, Vol. 5 (15 September 2009) by Joel T. Dudley, Robert Tibshirani, Tarangini Deshpande, Atul J. Butte posted by 15 people phoenixzxl tmmurali giovanni grahamc renatomilani ptrobajo zufar jclau klo mingzhi ngehlenborg dswan winterschlaefer daforerog brianb
	ARACNE: an algorithm for the reconstruction of gene regulatory networks in a mammalian cellular context. [My Copy] BMC Bioinformatics, Vol. 7 Suppl 1 (2006) by A. A. Margolin, I. Nemenman, K. Basso, et al.C. Wiggins, G. Stolovitzky, R. Dalla Favera, A. Califano posted by 19 people frohike dolchan tonamswish Neeperando akraemer APRegier verdicchio behindtherabbit kaarsinogen mbehbah1 druvus giovenko ptrobajo kentsis tmmurali jfr shigepong natstreet heliopais
	Network inference using informative priors [My Copy] Proceedings of the National Academy of Sciences, Vol. 105, No. 38. (2008), pp. 14313-14318. by Sach Mukherjee, Terence P. Speed posted by 12 people zufar bertelsen Jarman Lab ggallone guhjy Borelli ptrobajo jfr markstoehr stringertheory roys tmmurali
	The properties of high-dimensional data spaces: implications for exploring gene and protein expression data [My Copy] Nat Rev Cancer, Vol. 8, No. 1. (01 January 2008), pp. 37-49. by Robert Clarke, Habtom W. Ressom, Antai Wang, et al.Jianhua Xuan, Minetta C. Liu, Edmund A. Gehan, Yue Wang posted by 19 people Zephyrus aviad_work ipark-kaist isimpson Scis0000002 baizhang bertelsen ptrobajo jfr guhjy tmmurali dwf frohike cjeans nedwards Bioinformatics shikin blackm0k brianb
	Identification of functional modules using network topology and high-throughput data. [My Copy] BMC systems biology, Vol. 1, No. 1. (2007), 8. by Igor Ulitsky, Ron Shamir posted by 19 people greg akshayk ptrobajo yaredo isimpson qluo aheilbut zufar roys frohike tmmurali dragonrez jfr wnpx Ao_Li2007 lyndon bertelsen ellakat carlk
	Gene-set approach for expression pattern analysis [My Copy] Brief Bioinform, Vol. 9, No. 3. (1 May 2008), pp. 189-197. by Dougu Nam, Seon-Young Kim posted by 19 people bertelsen srp33 tonamswish kemalpak shikin ipark-kaist ihpark ptrobajo guhjy seemu thomaskelder lp2 giovenko AlexanderPico heliopais tmmurali yas beete klo
	Cytoscape: a software environment for integrated models of biomolecular interaction networks. [My Copy] Genome research, Vol. 13, No. 11. (November 2003), pp. 2498-2504. by Paul Shannon, Andrew Markiel, Owen Ozier, et al.Nitin S. Baliga, Jonathan T. Wang, Daniel Ramage, Nada Amin, Benno Schwikowski, Trey Ideker posted by 38 people JeremyZucker daveGerrard fastjoe23 badi stharward kentz tonamswish janani137 shung schwartzjmc APRegier panghouse robert85 capitall higueruelo shikin daforerog cswinburne thomaskelder nolodie giovenko Stew dragonrez balajis tvdbulck frohike carmaus dagmar natstreet jlh64 dIEMoSIRIS MoSi-Rostock compneur Evangelia pmendes yggdrasil carlk Borelli
	Network-based global inference of human disease genes. [My Copy] Molecular systems biology, Vol. 4 (6 May 2008) by X. Wu, R. Jiang, M. Q. Zhang, S. Li posted by 14 people carlk daforerog ilyashl saket tmmurali diamantis jfr maralena bootsy biomcgary guhjy zwang ptrobajo Borelli
	Strong Inference for Systems Biology [My Copy] PLoS Comput Biol, Vol. 5, No. 8. (28 August 2009), e1000459. by Daniel A. Beard, Martin J. Kushmerick posted by 12 people sobolevnrm dagmar ajaymalik Borelli rdiaz ptrobajo coffeerv bertelsen jonathancooper abhishek_tiwari tmmurali jjray
	Error bars in experimental biology [My Copy] J. Cell Biol., Vol. 177, No. 1. (9 April 2007), pp. 7-11. by Geoff Cumming, Fiona Fidler, David L. Vaux posted by 62 people Jporci pjmaybank inbetweener tt srmblack abhishek_tiwari druvus bangyuzhou schoeband brianb cambray dbikard rec3141 ajaymalik Gorzomagnificent daforerog sen_cheng yangjustinc maximilianh qwermish bayesian ntakano flips inesdesantiago brian ana batallah manduca kuhn Borelli dayjm kristina chad_davis tny dullhunk rabu lechristophe nelmor jdelcampo fishtank emmahe lisa1 Daria_G devender bmaust cabbagezs natstreet winterschlaefer krokicki loopback007 structural_bioinformatics Bioinformatics VisionLab FlowCytometry Microbial-Ecology wilbur tdmckee renatomilani delenca arindrartow guhjy mjoach
	Biopython: freely available Python tools for computational molecular biology and bioinformatics [My Copy] Bioinformatics, Vol. 25, No. 11. (1 June 2009), pp. 1422-1423. by Peter J. A. Cock, Tiago Antao, Jeffrey T. Chang, et al.Brad A. Chapman, Cymon J. Cox, Andrew Dalke, Iddo Friedberg, Thomas Hamelryck, Frank Kauff, Bartek Wilczynski, Michiel J. L. de Hoon posted by 48 people eesruiz Geknitics pekrau Systems_Biology Computational_Systems_Biology Sergey_gerbek hwright jfr karinaecomp applebyb klexa rdiaz FabienneGranier thegoose Structural Biology Group TorVergata oteri cmzmasek jwm guhjy Journal picks AlexBateman daforerog ltitodem Thaverkamp baker-group sobolevnrm psique Bioinformatics dswan neils dullhunk bertelsen Vincent_Rouilly gwallau brianb jorisslob svenrahmann jmeppley VGreiff sjcockell druvus Software-Architecture OER_Open_Educational_Resources Method_Engineering_Services jago kshameer operon svozil
	The human disease network [My Copy] Proceedings of the National Academy of Sciences, Vol. 104, No. 21. (22 May 2007), pp. 8685-8690. by Kwang-Il Goh, Michael E. Cusick, David Valle, Barton Childs, Marc Vidal, Albert-LÃ¡szlÃ³ BarabÃ¡si posted by 49 people robfsouza bertelsen smichan biomcgary pawelsobko CurAbility Scis0000002 qluo cbforrest Network Analysis of Genes Regulated in Renal Diseases daforerog nedwards Dulcinea saket kaarsinogen roys Yanno guhjy aalibes cannin kuhn jfr yas balicea neveaire bundschu raiyar grahamc joepickrell leSyl henning dejori xingxu winterschlaefer naegele Biostatistics Computational-Genomics Bioinformatics Neuroscience steinmetzlab shoshin ic4 generif_paper shikin nolodie GomezLab mingzhi carlk yaredo
	A general modular framework for gene set enrichment analysis [My Copy] BMC Bioinformatics, Vol. 10, No. 1. (03 February 2009), 47. by Marit Ackermann, Korbinian Strimmer posted by 19 people ptrobajo zufar srp33 vingron dipenps shikin arjun_citeulike guhjy pk506 aviad_work thomaskelder ydhwang rdiaz kshameer renatomilani Bioinformatics dswan cmzmasek RamuAnandakrishnan
	Inferring Pathway Activity toward Precise Disease Classification [My Copy] PLoS Comput Biol, Vol. 4, No. 11. (7 November 2008), e1000217. by Eunjung Lee, Han-Yu Chuang, Jong-Won Kim, Trey Ideker, Doheon Lee posted by 14 people rschulz isimpson yaredo frohike ipark-kaist jfr aviad_work ajbattle zufar carlk renatomilani dragonrez tmmurali ptrobajo
	Hypergraphs and Cellular Networks [My Copy] PLoS Comput Biol, Vol. 5, No. 5. (29 May 2009), e1000385. by Steffen Klamt, Utz-Uwe Haus, Fabian Theis posted by 12 people rdiaz ptrobajo poirel apocapoc trfield uuh danmaclean fgibson dswan tmmurali Borelli shikin
	A consensus yeast metabolic network reconstruction obtained from a community approach to systems biology [My Copy] Nat Biotech, Vol. 26, No. 10. (09 October 2008), pp. 1155-1160. by Markus J. Herrgard, Neil Swainston, Paul Dobson, et al.Warwick B. Dunn, K. Yalcin Arga, Mikko Arvas, Nils Buthgen, Simon Borger, Roeland Costenoble, Matthias Heinemann, Michael Hucka, Nicolas Le Novere, Peter Li, Wolfram Liebermeister, Monica L. Mo, Ana P. Oliveira, Dina Petranovic, Stephen Pettifer, Evangelos Simeonidis, Kieran Smallbone, Irena Spasie, Dieter Weichart, Roger Brent, David S. Broomhead, Hans V. Westerhoff, Betul Kurdar, Merja Penttila, Edda Klipp, Bernhard O. Palsson, Uwe Sauer, Stephen G. Oliver, Pedro Mendes, Jens Nielsen, Douglas B. Kell posted by 25 people m_j pmendes windman83 jfr raiyar neilswainston irenas MetabolicModeling JeremyZucker chasmand schwartzjmc pinney pauldobson alaninmcr allysonlister zwang guhjy dbk BergmanLab michaelbarton ptrobajo neils dullhunk pengchy tmmurali
	A Differential Wiring Analysis of Expression Data Correctly Identifies the Gene Containing the Causal Mutation [My Copy] PLoS Comput Biol, Vol. 5, No. 5. (1 May 2009), e1000382. by Nicholas J. Hudson, Antonio Reverter, Brian P. Dalrymple posted by 11 people rdiaz guhjy tmmurali Borelli giovanni cabbagesofdoom roys chrisamiller dswan ptrobajo dolchan
	Systems Biology: A Brief Overview [My Copy] Science, Vol. 295, No. 5560. (1 March 2002), pp. 1662-1664. by Hiroaki Kitano posted by 46 people dagmar pjmaybank kokphinchooi schmidtm abhishek_tiwari fgibson roys daforerog Scis0000002 agomez smac tlse65 fierykylin Adso dansullivanblk rsantana joseph_x_zhou reyez softsimu irenas Yanno Borelli wnpx biosv shivakumar3_14 dgront kehan cconboy mmt margaritis grahamc roland_ewald carmaus dbk-lab biodiversity_conservation Bioinformatics GrassBase dIEMoSIRIS MoSi-Rostock jdiezperezj maburkitt mertnuhoglu edvin lenov soramame_0518 nsamways
	Integrating large-scale functional genomic data to dissect the complexity of yeast regulatory networks. [My Copy] Nature genetics, Vol. 40, No. 7. (15 July 2008), pp. 854-861. by Jun Zhu, Bin Zhang, Erin N. Smith, et al.Becky Drees, Rachel B. Brem, Leonid Kruglyak, Roger E. Bumgarner, Eric E. Schadt posted by 21 people JoeBanks arider1 megraw TRHvidsten siebert Jarman Lab ggallone jo_davies suteedee burak realzhang kengg maralena ptrobajo tmmurali guhjy roys marck caseybrown djkt srp33
	BioMart--biological queries made easy. [My Copy] BMC genomics, Vol. 10, No. 1. (2009), 22. by Damian Smedley, Syed Haider, Benoit Ballester, et al.Richard Holland, Darin London, Gudmundur Thorisson, Arek Kasprzyk posted by 34 people aaltenburger artaban421 sjcockell lmichan jdbowes fgibson pekrau gangcai daforerog jfr fisherp allysonlister Bioinformatics - CRUK Stew grahamc Bioinformatics dswan Roswell Cancer Crosstalk Zephyrus renatomilani guhjy natstreet pablocarb Cortel dbk mitko brianb ajaymalik neils kshameer dullhunk druvus BergmanLab cisevol
	From molecular to modular cell biology. [My Copy] Nature, Vol. 402, No. 6761 Suppl. (2 December 1999), pp. C47-C52. by L. H. Hartwell, J. J. Hopfield, S. Leibler, A. W. Murray posted by 36 people antonkratz dagmar biomcgary poirel bertelsen Scis0000002 daforerog jporternj chihchun_chen babakap AurelienMazurie rhem1224 balajis nuke2005 rubendrr wnpx i41m adepace javierFellow mmt mirzazadeh carmaus dejori EisenLab TCR_Signaling cytoskeleton-and-afm SysbioMPI-TCells dIEMoSIRIS ic4 generif_paper MoSi-Rostock carlk awooga tvdbulck vsausg dragonrez
	Network-based classification of breast cancer metastasis. [My Copy] Molecular systems biology, Vol. 3 (16 October 2007) by Han-Yu Y. Chuang, Eunjung Lee, Yu-Tsueng T. Liu, Doheon Lee, Trey Ideker posted by 34 people yaredo Complex Networks fesousa ipark-kaist aviad_work AbnerCYH zufar provero jmuhlich Zephyrus Jarman Lab ggallone giovenko winterschlaefer isimpson ihpark bertelsen jfr kengg frohike mikaelhuss cjeans zwang cerami abhattac Bioinformatics shikin oelemento roys GeneGo ptrobajo dap5087 saman_vp verdicchio
	A survey of visualization tools for biological network analysis. [My Copy] Biodata mining, Vol. 1, No. 1. (28 November 2008), 12. by Georgios A. Pavlopoulos, Anna-Lynn L. Wegener, Reinhard Schneider posted by 16 people nolodie brianb abhishek_tiwari ImagCom - Biomedical Text Computing Complex Networks eesruiz daforerog lptolik guhjy renatomilani hersh006 behindtherabbit dswan fgibson allysonlister sjcockell
	Cross species analysis of microarray expression data [My Copy] Bioinformatics, Vol. 25, No. 12. (15 June 2009), pp. 1476-1483. by Yong Lu, Peter Huggins, Ziv Bar-Joseph posted by 14 people jfr roys daveGerrard ptrobajo guhjy yaredo shikin Bioinformatics dswan renatomilani rdiaz thomaskelder natstreet druvus
	Network motifs: theory and experimental approaches [My Copy] Nature Reviews Genetics, Vol. 8, No. 6. (01 June 2007), pp. 450-461. by Uri Alon posted by 38 people yoshiness Katieleonard nurban mjoach vtraag mlee1 myzhang hkuhn mtagaya cambray dswan renatomilani heliopais snow_dragon druvus pengchy cswinburne GEB dlobo kentz icases aalibes cmmorel jtaylor dbikard margaritis shigepong zwang grinfish Pascalichouchou xingxu karfunkel TNT vietanh0 haarcuba Centre de Recherches Interdisciplinaires SynBioSys Borelli
	Getting connected: analysis and principles of biological networks [My Copy] Genes & Development, Vol. 21, No. 9. (1 May 2007), pp. 1010-1024. by Xiaowei Zhu, Mark Gerstein, Michael Snyder posted by 17 people abhishek_tiwari arsyed nzm jaimie ptrobajo davidecellai pengchy jfr balajis grahamc fishtank nedwards naegele Evangelia kristen carlk renatomilani
	WebLab: a data-centric, knowledge-sharing bioinformatic platform [My Copy] Nucl. Acids Res., Vol. 37, No. suppl_2. (1 July 2009), pp. W33-39. by Xiaoqiao Liu, Jianmin Wu, Jun Wang, et al.Xiaochuan Liu, Shuqi Zhao, Zhe Li, Lei Kong, Xiaocheng Gu, Jingchu Luo, Ge Gao posted by 15 people applebyb fgibson abhishek_tiwari pekrau dullhunk leemond31 pininforthefjords nuin daforerog druvus operon guhjy psique renatomilani neils
	Automated multidimensional phenotypic profiling using large public microarray repositories [My Copy] Proceedings of the National Academy of Sciences, Vol. 106, No. 30. (28 July 2009), pp. 12323-12328. by Min Xu, Wenyuan Li, Gareth M. James, Michael R. Mehan, Xianghong J. Zhou posted by 9 people zufar tmmurali giovanni Borelli rdiaz guhjy TRHvidsten yaredo ptrobajo
	Eu.Gene Analyzer a tool for integrating gene expression data with pathway databases. [My Copy] Bioinformatics (Oxford, England), Vol. 23, No. 19. (1 October 2007), pp. 2631-2632. by Duccio Cavalieri, Cinzia Castagnini, Simona Toti, et al.Karolina Maciag, Thomas Kelder, Luca Gambineri, Samuele Angioli, Piero Dolara posted by 8 people ptrobajo guhjy tmmurali jfr aviad_work waszak AlexanderPico thomaskelder
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	Why Most Published Research Findings Are False [My Copy] PLoS Med, Vol. 2, No. 8. (30 August 2005), e124. by John P. A. Ioannidis posted by 110 people NicolasLescureux ulmer jphekman davebraze Sergey_gerbek cyounkin DavidG67 Horduna LIBrain sona lord_weldaan rubenroa aaltenburger lafuente alexhakkinen NIlz polivares yyfwuhan zzb3886 amargoli CulCog jenniferwilms Bioinformatics - CRUK Stew eshirdel ckai1 monkare scmelton LSK thegoose johntdelaney virolog olberd robertlischke cobi flieder arsyed mrt2k9 schoeband raftlondon steve3001 paleorthid pawelsobko mzkbnt memming mutesa donnachie apgaylard haloin bhengeveld yangjustinc STS Method_Engineering_Services Convention on Knowledge Commons jago Tomste Anesthesia and Acute Pain richardh daforerog UCD SILS IS40340 Research Practice kristinchapman FeltonM7675 pengchy ajaymalik gbodner neteler mixedman Roswell Cancer Crosstalk Zephyrus rklancer guhjy sebpaquet garyfeng monod Borelli jmeppley chad_davis Najamuddin irinas indigoviolet mwyarbro ddahlem dullhunk madhadron balabu jiyu msierk Imat lmi_swap chenlc03 biblio24 pratap kevinemamy cjeans feipan arne suizan jasonbobe austin lonettma buggle ReadingLab EisenLab Sciences_communication_societe dIEMoSIRIS dnugent Malc elsbury shoshin achinerarias
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	A genomewide functional network for the laboratory mouse. [My Copy] PLoS computational biology, Vol. 4, No. 9. (2008), e1000165. by Y. Guan, C. L. Myers, R. Lu, I. R. Lemischka, C. J. Bult, O. G. Troyanskaya posted by 10 people roys dansullivanblk biomcgary cswinburne zwang pengchy ptrobajo guhjy grahamc tmmurali
	Ten Simple Rules for Choosing between Industry and Academia [My Copy] PLoS Computational Biology, Vol. 5, No. 6. (26 June 2009), e1000388. by David B. Searls posted by 40 people welliegirl Sergey_gerbek cyounkin Tomste Horduna aaltenburger Zephyrus CulCog thegoose Yanno timflutre tnhh PeteField MarcoAlvarez sobolevnrm Bioinformatics - CRUK Stew dbikard jasontsai casutton franklu310 kieran101 chrisamiller rdiaz daveGerrard reyez neils marekrud Borelli psique kshameer gjuggler sdaehne flips Journal picks ppgardne fgibson McCammon barry dullhunk
	How To Choose a Good Scientific Problem [My Copy] Molecular Cell, Vol. 35, No. 6. (24 September 2009), pp. 726-728. by Uri Alon posted by 133 people janderz8 sdaehne artaban421 cefa gvdh penneyft welliegirl bertelsen thegoose Brain-like research group xawen chriswillmott nellapower ishiken andreff claudiushauptmann cermak bmoores karthikraman applebyb mordiano Gorzomagnificent Horduna ajaymalik mmwoodman dbikard toszko mthomure timflutre cyounkin marsl0am jmzhuo dmorti renatomilani ibre kevinemamy Sergey_gerbek huberse ddbb12 seneca mattbiehl mmborges GeeSharpMinor jjjpppfff zhangfh andreacapocci melo_mcr aaltenburger iannis jichok josephjose TorstenWaldminghaus kshameer rudalert kvalyi UWA Science Communication duel_jetty allaves milab@yzu rabit fercosber hax123 iskanbasal livingthingdan poojamaj gonzalez amynmoore ramalldf pvdg sfalsharif dill2009 singhsh rogermug aha jarekadam Jansen04 cgravlee lkakinami anuragsethi flips robfree kaliczp yyfwuhan luciensamary elsantosneto mgaldino daveGerrard sandfire tnhh lesandrop munzmarci pdpcosta Information Integration Architecture mxro wangngu myriasofo OliverHarriman AnthonySoprano robertlischke R_C_Cordeiro daforerog operon nandipati wenhaosparty jeffcrow leocmcheung fgibson snakehsu cisevol BergmanLab michaelbarton dna dullhunk danilov m_lew abellogin cxshang grahamc SantoshKalwar Xusheng leonardo roys benoitvalley zchen75 darshan druvus Asclepius Roswell Cancer Crosstalk Zephyrus songpku aalibes flieder pedromts
	Tissue specificity and the human protein interaction network. [My Copy] Molecular systems biology, Vol. 5 (7 April 2009) by Alice Bossi, Ben Lehner posted by 14 people jfr dolchan balicea poirel tmmurali diamantis phoenixzxl coela frohike Kubke renatomilani TRHvidsten grahamc sjung
	Human genomes as email attachments [My Copy] Bioinformatics, Vol. 25, No. 2. (15 January 2009), pp. 274-275. by Scott Christley, Yiming Lu, Chen Li, Xiaohui Xie posted by 30 people daforerog hzoltan idonaldson kshameer operon guhjy druvus n00c dnewburger djkt mmartin baker-group sobolevnrm jfr psique BergmanLab cisevol GeeSharpMinor neils Bioinformatics dswan dullhunk siebert hpiwowar nuin cthachuk rschulz treangen renatomilani jmeppley
	Network-based prediction of protein function [My Copy] Molecular Systems Biology, Vol. 3 (13 March 2007) by Roded Sharan, Igor Ulitsky, Ron Shamir posted by 26 people cerca ptrobajo kiekyon AbnerCYH roys jwhitney dragonrez Sonix mtaschuk babakap phoenixzxl druvus pengchy jjray cmmorel wnpx julius mikaelhuss massivemayhem cjeans iris_2001 karfunkel SysbioMPI-TCells mingzhi ellakat carlk
	A bottom-up approach to gene regulation. [My Copy] Nature, Vol. 439, No. 7078. (16 February 2006), pp. 856-860. by Nicholas J. Guido, Xiao Wang, David Adalsteinsson, et al.David McMillen, Jeff Hasty, Charles R. Cantor, Timothy C. Elston, J. J. Collins posted by 21 people genocad bertelsen Scis0000002 raik rklancer snuppepuppan guhjy okarsligil bayesian balicea samal madhadron balabu johncumbers mmt proulx dbikard nklee Bioinformatics SynBioSys tmmurali
	Next-generation DNA sequencing. [My Copy] Nature biotechnology, Vol. 26, No. 10. (09 October 2008), pp. 1135-1145. by Jay Shendure, Hanlee Ji posted by 50 people Jporci daforerog dchughes hzoltan cthachuk giovenko heliopais seb1 installe niallhaslam Vincent_Rouilly rschulz fishtank bluto Annab katholt jmcq michaelbarton n00c jfr dna nzm farhat idoerg mhz mmartin antonkratz jbhiatt yupu Bioinformatics behindtherabbit guhjy Pascalichouchou frohike dakelley ptrobajo zwang Roswell Cancer Crosstalk Zephyrus psique natstreet druvus nuin alexknight reyez dbk Oxford Virology wsjames pengchy GeeSharpMinor
	Strategic Reading, Ontologies, and the Future of Scientific Publishing [My Copy] Science, Vol. 325, No. 5942. (14 August 2009), pp. 828-832. by Allen H. Renear, Carole L. Palmer posted by 60 people gthorisson 8_01 lilith nancylongnecker BergmanLab cisevol aaltenburger radagabriel antonkratz Semantic networks in translation guhjy Orengo Group Journal Picks robertrentzsch artaban421 malkav30 conne262 clarabermudez jclau pick600 CulCog yuifu daforerog smuekusc robertlischke nperoni drevicko eisdur Ubicomp STS Convention on Knowledge Commons Integrative Expertise for Global Health jago dayjm sebpaquet tnhh rickl Tomste fheintz reyez biologyeditors fgibson lmichan moernerlab samjlord rdiaz polivares Journal picks jandot dullhunk deanmalmgren druvus modza emptyhb plosmedicine renatomilani Zephyrus applebyb newtekken rschulz PaperCollector
	CloudBurst: highly sensitive read mapping with MapReduce [My Copy] Bioinformatics, Vol. 25, No. 11. (1 June 2009), pp. 1363-1369. by Michael C. Schatz posted by 36 people joshdsullivan cthachuk hzoltan jfr walshtp idonaldson orzenil heliopais dakelley bozdagd agbiotec jandot guhjy n00c cymacs semrich nuin operon AlexBateman fgibson KCL & UCL Bioinformatics rschulz Bioinformatics dswan mitko djkt humburg jmeppley coela vagoskar svenrahmann natstreet brianb Neeperando druvus neils
	Integration of biological networks and gene expression data using Cytoscape. [My Copy] Nature protocols, Vol. 2, No. 10. (27 September 2007), pp. 2366-2382. by Melissa S. Cline, Michael Smoot, Ethan Cerami, et al.Allan Kuchinsky, Nerius Landys, Chris Workman, Rowan Christmas, Iliana Avila-Campilo, Michael Creech, Benjamin Gross, Kristina Hanspers, Ruth Isserlin, Ryan Kelley, Sarah Killcoyne, Samad Lotia, Steven Maere, John Morris, Keiichiro Ono, Vuk Pavlovic, Alexander R. Pico, Aditya Vailaya, Peng-Liang L. Wang, Annette Adler, Bruce R. Conklin, Leroy Hood, Martin Kuiper, Chris Sander, Ilya Schmulevich, Benno Schwikowski, Guy J. Warner, Trey Ideker, Gary D. Bader posted by 21 people daveGerrard greg badi ptrobajo tonamswish daforerog bertelsen Cortel cswinburne giovenko isimpson emmackinnon yaredo Stew guhjy jfr shikin shung thomaskelder GeneGo AlexanderPico
	Increasing the Power to Detect Causal Associations by Combining Genotypic and Expression Data in Segregating Populations [My Copy] PLoS Computational Biology, Vol. 3, No. 4. (1 April 2007), e69. by Jun Zhu, Matthew C. Wiener, Chunsheng Zhang, et al.Arthur Fridman, Eric Minch, Pek Y. Lum, Jeffrey R. Sachs, Eric E. Schadt posted by 9 people roys nicholso brianb jfr hms jo_davies semrich tmmurali beete
	Genomic analysis of human microRNA transcripts [My Copy] Proceedings of the National Academy of Sciences, Vol. 104, No. 45. (6 November 2007), pp. 17719-17724. by Harpreet K. Saini, Sam Griffiths-Jones, Anton J. Enright posted by 20 people danaiancu tonamswish daforerog druvus microRNA heliopais jfr guhjy tmmurali dchughes AbnerCYH ealloza bootsy lp2 cabbagezs maximilianh RedmondSmyth gracio maralena tolot27