bakakaj's profile

Recent Activity

• 17:05: posted Bioconductor: open software development for computational biology and bioinformatics.
• 14:26: posted Correlation-maximizing surrogate gene space for visual mining of gene expression patterns in developing barley endosperm tissue
• 14:26: posted Multidimensional scaling for large genomic data sets

• 21:02: posted Heterogeneity of biofilms formed by nonmucoid Pseudomonas aeruginosa isolates from patients with cystic fibrosis.

• 18:47: posted DNA Microarrays in Analysis of Quorum Sensing: Strengths and Limitations

• 14:29: posted Engineering the luxCDABE genes from Photorhabdus luminescens to provide a bioluminescent reporter for constitutive and promoter probe plasmids and mini-Tn5 constructs.
• 13:31: posted Role of haemolytic and non-haemolytic phospholipase C from Pseudomonas aeruginosa in interleukin-8 release from human monocytes.

• 16:04: posted Components of the protein-excretion apparatus of Pseudomonas aeruginosa are processed by the type IV prepilin peptidase.
• 13:43: posted Regulation of enzyme synthesis in the arginine deiminase pathway of Pseudomonas aeruginosa.
• 13:42: posted Anaerobic metabolism and quorum sensing by Pseudomonas aeruginosa biofilms in chronically infected cystic fibrosis airways: rethinking antibiotic treatment strategies and drug targets.
• 13:41: posted Spatial physiological heterogeneity in Pseudomonas aeruginosa biofilm is determined by oxygen availability.
• 13:39: posted Deletion of znuA Virulence Factor Attenuates Brucella abortus and Confers Protection against Wild-Type Challenge
• 13:37: posted Zinc uptake system (znuA locus) of Brucella abortus is essential for intracellular survival and virulence in mice.
• 13:36: posted The high-affinity zinc-uptake system znuACB is under control of the iron-uptake regulator (fur) gene in the animal pathogen Pasteurella multocida
• 13:35: posted Role of the High-Affinity Zinc Uptake znuABC System in Salmonella enterica Serovar Typhimurium Virulence
• 13:34: posted Iron metabolism in pathogenic bacteria.
• 13:33: posted Iron acquisition in microbial pathogenesis.
• 13:32: posted An operon containing fumC and sodA encoding fumarase C and manganese superoxide dismutase is controlled by the ferric uptake regulator in Pseudomonas aeruginosa: fur mutants produce elevated alginate levels.
• 13:28: posted Inhibition of quorum sensing in Pseudomonas aeruginosa biofilm bacteria by a halogenated furanone compound
• 13:21: posted A Convenient Synthesis of Protoanemonin.
• 12:36: posted From xenobiotic to antibiotic, formation of protoanemonin from 4-chlorocatechol by enzymes of the 3-oxoadipate pathway.
• 12:35: posted Anaerobic survival of Pseudomonas aeruginosa by pyruvate fermentation requires an Usp-type stress protein.
• 12:33: posted Characterization of five novel Pseudomonas aeruginosa cell-surface signalling systems.
• 12:32: posted The alginate regulator AlgR and an associated sensor FimS are required for twitching motility in Pseudomonas aeruginosa.
• 12:31: posted Prokaryotic Osmoregulation: Genetics and Physiology
• 12:30: posted Fluorescence-based isolation of bacterial genes expressed within host cells.
• 12:26: posted Genome-wide identification of Pseudomonas aeruginosa exported proteins using a consensus computational strategy combined with a laboratory-based PhoA fusion screen.
• 12:24: posted Pseudomonas keratitis. The role of an uncharacterized exoprotein, protease IV, in corneal virulence.
• 12:23: posted Proteomic study of the Bacillus subtilis ribosome: Finding of zinc-dependent replacement for ribosomal protein L31 paralogues.
• 12:17: posted Responses of benthic macroinvertebrates to thin-layer disposal of dredged material in Mississippi Sound, USA
• 12:16: posted Non-parametric multivariate analyses of changes in community structure
• 12:02: posted A complementation analysis of the restriction and modification of DNA in Escherichia coli.
• 12:00: posted Halogenated furanones inhibit quorum sensing through accelerated LuxR turnover.
• 11:00: posted Genetic adaptation by Pseudomonas aeruginosa to the airways of cystic fibrosis patients.
• 10:59: posted Staphylococcus aureus serves as an iron source for Pseudomonas aeruginosa during in vivo coculture.
• 10:57: posted Use of the Galleria mellonella Caterpillar as a Model Host To Study the Role of the Type III Secretion System in Pseudomonas aeruginosa Pathogenesis
• 10:51: posted Silkworm larvae as an animal model of bacterial infection pathogenic to humans
• 10:49: posted Pseudomonas aeruginosa Virulence Analyzed in a Dictyostelium discoideum Host System
• 10:49: posted Drosophila as a model host for Pseudomonas aeruginosa infection.
• 10:47: posted Caenorhabditis elegans: a model genetic host to study Pseudomonas aeruginosa pathogenesis
• 10:36: posted Pseudomonas aeruginosa regulates flagellin expression as part of a global response to airway fluid from cystic fibrosis patients.
• 10:35: posted The response of Pseudomonas aeruginosa to iron: genetics, biochemistry and virulence.
• 10:34: posted Quorum-sensing genes in Pseudomonas aeruginosa biofilms: their role and expression patterns.
• 10:34: posted The Involvement of Cell-to-Cell Signals in the Development of a Bacterial Biofilm
• 10:33: posted Pseudomonas aeruginosa biofilms exposed to imipenem exhibit changes in global gene expression and beta-lactamase and alginate production.
• 10:32: posted Transcriptome analysis of Pseudomonas aeruginosa biofilm development: anaerobic respiration and iron limitation
• 10:27: posted Pseudomonas aeruginosa forms biofilms in acute infection independent of cell-to-cell signaling.
• 10:27: posted Mucosal biofilm formation on middle-ear mucosa in the chinchilla model of otitis media.
• 10:23: posted The contribution of MvfR to Pseudomonas aeruginosa pathogenesis and quorum sensing circuitry regulation: multiple quorum sensing-regulated genes are modulated without affecting lasRI, rhlRI or the production of N-acyl-l-homoserine lactones
• 10:23: posted A Distinct QscR Regulon in the Pseudomonas aeruginosa Quorum-Sensing Circuit
• 10:22: posted Quinolone signaling in the cell-to-cell communication system of Pseudomonas aeruginosa.
• 10:21: posted Cystic fibrosis: molecular biology and therapeutic implications.
• 10:19: posted Cystic fibrosis.
• 10:13: posted Pseudomonas infections in the thermally injured patient.
• 10:12: posted Assessment of protease (elastase) as a Pseudomonas aeruginosa virulence factor in experimental mouse burn infection.
• 10:11: posted Persistence of a multidrug-resistant Pseudomonas aeruginosa clone in an intensive care burn unit.

• 15:58: posted Endogenous and exogenous infection with Pseudomonas aeruginosa in a burns unit.

• 15:14: posted Effects of reduced mucus oxygen concentration in airway Pseudomonas infections of cystic fibrosis patients.
• 13:02: posted Quantitative proteomic analysis indicates increased synthesis of a quinolone by Pseudomonas aeruginosa isolates from cystic fibrosis airways.

• 14:35: posted The winds of (evolutionary) change: breathing new life into microbiology.

• 11:13: posted Four new derivatives of the broad-host-range cloning vector pBBR1MCS, carrying different antibiotic-resistance cassettes
• 11:12: posted Immobilization of Escherichia coli expressing the lux genes of Xenorhabdus luminescens.
• 11:06: posted Construction of improved Escherichia-Pseudomonas shuttle vectors derived from pUC18/19 and sequence of the region required for their replication in Pseudomonas aeruginosa
• 10:43: posted Discrepancy between viable counts and light output as viability measurements, following ciprofloxacin challenge of self-bioluminescent Pseudomonas aeruginosa biofilms

• 11:07: posted Vfr controls quorum sensing in Pseudomonas aeruginosa
• 10:30: posted The vfr gene product, required for Pseudomonas aeruginosa exotoxin A and protease production, belongs to the cyclic AMP receptor protein family.

• 11:43: posted Environmental and clinical isolates of Pseudomonas aeruginosa show pathogenic and biodegradative properties irrespective of their origin.