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	Genome sequencing in microfabricated high-density picolitre reactors. [My Copy] Nature In Nature, Vol. 437, No. 7057. (15 September 2005), pp. 376-380. by Marcel Margulies, Michael Egholm, William E. Altman, et al.Said Attiya, Joel S. Bader, Lisa A. Bemben, Jan Berka, Michael S. Braverman, Yi-Ju J. Chen, Zhoutao Chen, Scott B. Dewell, Lei Du, Joseph M. Fierro, Xavier V. Gomes, Brian C. Godwin, Wen He, Scott Helgesen, Chun Heen H. Ho, Chun He H. Ho, Gerard P. Irzyk, Szilveszter C. Jando, Maria L. Alenquer, Thomas P. Jarvie, Kshama B. Jirage, Jong-Bum B. Kim, James R. Knight, Janna R. Lanza, John H. Leamon, Steven M. Lefkowitz, Ming Lei, Jing Li, Kenton L. Lohman, Hong Lu, Vinod B. Makhijani, Keith E. McDade, Michael P. McKenna, Eugene W. Myers, Elizabeth Nickerson, John R. Nobile, Ramona Plant, Bernard P. Puc, Michael T. Ronan, George T. Roth, Gary J. Sarkis, Jan Fredrik F. Simons, John W. Simpson, Maithreyan Srinivasan, Karrie R. Tartaro, Alexander Tomasz, Kari A. Vogt, Greg A. Volkmer, Shally H. Wang, Yong Wang, Michael P. Weiner, Pengguang Yu, Richard F. Begley, Jonathan M. Rothberg posted by 45 people Dbarker06 n00c rshe seb1 pachorip katiehumphry jonilaserson michaelbarton sandfire natstreet daforerog idoerg mmartin azazello jbhiatt alessandrobrozzi leechuck bjorns dayjm jmeppley arve RMGraze JAShapiro balajis cdawson AaronDarling treangen usagi-kirin beatrizfernandez wenhan xingxu erbon Microbial-Ecology GIG gatech-compgenomics tpreeprem farhat carpi bpb mcox GustavoLacerda jlgreen Green Lab iSEEM kieran101
	Environmental Shotgun Sequencing: Its Potential and Challenges for Studying the Hidden World of Microbes [My Copy] PLoS Biol, Vol. 5, No. 3. (13 March 2007), e82. by Jonathan A. Eisen posted by 20 people druvus skembel hwright Thaverkamp AaronDarling anphony precale adgrativol silberbauer jmeppley jdelcampo azazello beatrizfernandez xingxu Microbial-Ecology jlgreen Green Lab olympos djkt iSEEM
	The Sorcerer II Global Ocean Sampling Expedition: Northwest Atlantic through Eastern Tropical Pacific [My Copy] PLoS Biol, Vol. 5, No. 3. (13 March 2007), e77. by Douglas B. Rusch, Aaron L. Halpern, Granger Sutton, et al.Karla B. Heidelberg, Shannon Williamson, Shibu Yooseph, Dongying Wu, Jonathan A. Eisen, Jeff M. Hoffman, Karin Remington, Karen Beeson, Bao Tran, Hamilton Smith, Holly Baden-Tillson, Clare Stewart, Joyce Thorpe, Jason Freeman, Cynthia Andrews-Pfannkoch, Joseph E. Venter, Kelvin Li, Saul Kravitz, John F. Heidelberg, Terry Utterback, Yu-Hui Rogers, Luisa I. Falcón, Valeria Souza, Germán Bonilla-Rosso, Luis E. Eguiarte, David M. Karl, Shubha Sathyendranath, Trevor Platt, Eldredge Bermingham, Victor Gallardo, Giselle Tamayo-Castillo, Michael R. Ferrari, Robert L. Strausberg, Kenneth Nealson, Robert Friedman, Marvin Frazier, J. Craig Venter posted by 23 people antonkratz dakelley maria_hauser mlangill AaronDarling azazello skembel aramata jmeppley kaspermunch michC jdelcampo stajich skoch3 beatrizfernandez kinestetika Bioinformatics Microbial-Ecology Koch_Lab microbiology_nijmegen Thaverkamp djkt iSEEM
	Binning sequences using very sparse labels within a metagenome [My Copy] BMC Bioinformatics, Vol. 9, No. 1. (28 April 2008), 215. by Chon K. Chan, Arthur Hsu, Saman Halgamuge, Sen L. Tang posted by 19 people CorinYeats ajsferreira skembel esyoun sriesenfeld jmeppley dakelley Bioinformatics Thaverkamp idoerg azazello druvus alexl mjetten microbiology_nijmegen werwiesel jlgreen iSEEM djkt
	Basic local alignment search tool. [My Copy] Journal of molecular biology, Vol. 215, No. 3. (5 October 1990), pp. 403-410. by S. F. Altschul, W. Gish, W. Miller, E. W. Myers, D. J. Lipman posted by 87 people claire_jubin danbolser PolymeraseI VGreiff richter80 krapnik azazello rshe mtaschuk sjcockell niallhaslam djohnson thegoose humburg timhubbard pachorip n00c maria_hauser rpetrenko parnell yylin esyoun APRegier idoerg Neeperando robert85 thegoose2 daforerog mcbla coela alessandroparini bertelsen Blackbeard florisbuijzen laurabailey treangen pwais mmartin C. elegans / WormBase tharris dmp camster davidng evaf dragonrez jwm jmeppley Ayest RMGraze ea yas balajis alexg indigoviolet moborg arcticrasta dullhunk dgront caporaso michC myui BioNica CitoJam rabio timflutre lusk cjeans incovoma beatrizfernandez wenhan jtomasch GustavoLacerda sgoetz siebertm ichbins81 jofiel dbk-lab EisenLab T_lab biomedical-nlp Microbial-Ecology Thaverkamp shung marti ashaytan benwei granujilla
	MEGAN analysis of metagenomic data. [My Copy] Genome research, Vol. 17, No. 3. (06 March 2007), pp. 377-386. by Daniel H. Huson, Alexander F. Auch, Ji Qi, Stephan C. Schuster posted by 21 people karinlag Orengo Group Journal Picks CorinYeats ajsferreira taylor73 esyoun dakelley Thaverkamp druvus idoerg guhjy treangen jmeppley azazello wenhan carpi alexl mjetten anammox microbiology_nijmegen hpaces
	The Sorcerer II Global Ocean Sampling Expedition: Expanding the Universe of Protein Families. [My Copy] PLoS Biol, Vol. 5, No. 3. (13 March 2007) by Shibu Yooseph, Granger Sutton, Douglas B B. Rusch, et al.Aaron L L. Halpern, Shannon J J. Williamson, Karin Remington, Jonathan A A. Eisen, Karla B B. Heidelberg, Gerard Manning, Weizhong Li, Lukasz Jaroszewski, Piotr Cieplak, Christopher S S. Miller, Huiying Li, Susan T T. Mashiyama, Marcin P P. Joachimiak, Christopher van Belle, John-Marc M. Chandonia, David A A. Soergel, Yufeng Zhai, Kannan Natarajan, Shaun Lee, Benjamin J J. Raphael, Vineet Bafna, Robert Friedman, Steven E E. Brenner, Adam Godzik, David Eisenberg, Jack E E. Dixon, Susan S S. Taylor, Robert L L. Strausberg, Marvin Frazier, J Craig C. Venter posted by 14 people Thaverkamp skembel AaronDarling azazello jmeppley kaspermunch michC Bioinformatics mjetten microbiology_nijmegen vrich jlgreen Green Lab iSEEM
	Gapped BLAST and PSI-BLAST: a new generation of protein database search programs. [My Copy] Nucleic acids research, Vol. 25, No. 17. (1 September 1997), pp. 3389-3402. by S. F. Altschul, T. L. Madden, A. A. Schäffer, et al.J. Zhang, Z. Zhang, W. Miller, D. J. Lipman posted by 75 people saunders rshe niallhaslam ucbcjbm timhubbard parnell tfuji maria_hauser jbhiatt yylin mgomes BioNica idoerg pjcite swp09 kgutwin mcbla cpwardell References for 3DSim paper johanviklund daforerog nlapalu sebk tjimenez shung pwais dakelley knaseanka setar iakes miguel kaarsinogen bjorns bicko jmeppley chad_davis balajis nuke2005 eweaver david_parsons indigoviolet dullhunk robert dgront happy_manatee caporaso treangen kengg manzanita CitoJam jdelcampo aengisch rabio massivemayhem mirzazadeh azazello sujaikumar beatrizfernandez GustavoLacerda siebertm adijr viktor21614 EisenLab biomedical-nlp Microbial-Ecology Plantandetc mijam grottenolm bandrewfox edvin newton1234 mariakmejia granujilla marti CharlesM
	A core gut microbiome in obese and lean twins [My Copy] Nature In Nature, Vol. 457, No. 7228. (30 November 2008), pp. 480-484. by Peter J. Turnbaugh, Micah Hamady, Tanya Yatsunenko, et al.Brandi L. Cantarel, Alexis Duncan, Ruth E. Ley, Mitchell L. Sogin, William J. Jones, Bruce A. Roe, Jason P. Affourtit, Michael Egholm, Bernard Henrissat, Andrew C. Heath, Rob Knight, Jeffrey I. Gordon posted by 15 people skennedy8 danilov jmeppley Microbial-Ecology Thaverkamp azazello skembel idoerg slevy03 booker iSEEM djkt jbhiatt Zephyrus guhjy
	Gene-Boosted Assembly of a Novel Bacterial Genome from Very Short Reads [My Copy] PLoS Comput Biol In PLoS Comput Biol, Vol. 4, No. 9. (26 September 2008), e1000186. by Steven L. Salzberg, Daniel D. Sommer, Daniela Puiu, Vincent T. Lee posted by 23 people skembel n00c operon BergmanLab michaelbarton azazello Thaverkamp dakelley sconlan GustavoLacerda treangen natstreet antonkratz druvus Papers recommended by the Roscoff Plankton Group vaulot iSEEM djkt microbiology_nijmegen Katje Mycology stajich semrich
	Metatranscriptomics reveals unique microbial small RNAs in the ocean\|[rsquo]\|s water column [My Copy] Nature, Vol. 459, No. 7244. (14 May 2009), pp. 266-269. by Yanmei Shi, Gene W. Tyson, Edward F. DeLong posted by 18 people tonamswish kinestetika gdb michaelbarton samgj Papers recommended by the Roscoff Plankton Group Microbial-Ecology vaulot microbiology_nijmegen Katje absterga jmeppley Thaverkamp pengchy iSEEM djkt skembel jbhiatt
	Metagenomics reveals our incomplete knowledge of global diversity. [My Copy] Bioinformatics (Oxford, England) (13 July 2008) by Miguel Pignatelli, Gabriel Aparicio, Ignacio Blanquer, Vicente Hernández, Andrés Moya, Javier Tamames posted by 14 people hwright Thaverkamp jmeppley microrita skembel druvus Papers recommended by the Roscoff Plankton Group Microbial-Ecology vaulot reyez iSEEM djkt bootsy nuin
	Phylogenetic Approaches for Describing and Comparing the Diversity of Microbial Communities [My Copy] Appl. Environ. Microbiol., Vol. 68, No. 8. (1 August 2002), pp. 3673-3682. by Andrew P. Martin posted by 11 people hwright sharpton skembel sriesenfeld jmeppley Microbial-Ecology Thaverkamp mcox Olaf_Ilzins djkt iSEEM
	Metagenomics: genomic analysis of microbial communities. [My Copy] Annu Rev Genet, Vol. 38 (2004), pp. 525-552. by C. S. Riesenfeld, P. D. Schloss, J. Handelsman posted by 10 people Thaverkamp ericvonwettberg skembel knaseanka jmeppley wenhan mcox djkt Green Lab iSEEM
	Quantifying environmental adaptation of metabolic pathways in metagenomics [My Copy] Proceedings of the National Academy of Sciences, Vol. 106, No. 5. (3 February 2009), pp. 1374-1379. by Tara A. Gianoulis, Jeroen Raes, Prianka V. Patel, et al.Robert Bjornson, Jan O. Korbel, Ivica Letunic, Takuji Yamada, Alberto Paccanaro, Lars J. Jensen, Michael Snyder, Peer Bork, Mark B. Gerstein posted by 20 people dutilh Paccanaro Lab paccanarolab vvoorr djkt jjray roys sharpton Lizzy_fun skembel iSEEM jlgreen Thaverkamp dbensasson anphony michaelbarton idoerg trfield larsjuhljensen jmeppley
	The bacterial species definition in the genomic era. [My Copy] Philos Trans R Soc Lond B Biol Sci, Vol. 361, No. 1475. (29 November 2006), pp. 1929-1940. by K. T. Konstantinidis, A. Ramette, J. M. Tiedje posted by 11 people dutilh druvus AaronDarling skembel treangen iSEEM jmeppley kinestetika Microbial-Ecology microbiology_nijmegen Thaverkamp
	Accuracy and quality of massively parallel DNA pyrosequencing [My Copy] Genome Biology, Vol. 8, No. 7. (20 July 2007), R143. by Susan Huse, Julie Huber, Hilary Morrison, Mitchell Sogin, David Welch posted by 23 people avilella darian nfparrish druvus n00c iSEEM jlgreen Thaverkamp orzenil mmartin floatingpoint Huub_odc gpappas jmeppley mblwhoi grahamc azazello GustavoLacerda Bioinformatics blobbybirdman gatech-compgenomics Olaf_Ilzins bozdagd
	BLAT--the BLAST-like alignment tool. [My Copy] Genome research, Vol. 12, No. 4. (1 April 2002), pp. 656-664. by W. James Kent posted by 41 people azazello rshe dchughes rdowell LabDros gwallau druvus aprasad maria_hauser n00c sficklin Thaverkamp cpwardell BergmanLab daveGerrard coela daforerog pwais umit mmartin paszkows operon miguel pcahan1 Ayest indigoviolet mtagaya treangen michC djkt timflutre olympos cjeans wenhan natstreet antonkratz EisenLab yoanjacquemin talponer bozdagd gpappas
	Microbial diversity - insights from population genetics [My Copy] Environmental Microbiology, Vol. 0, No. 0. (0000), pp. ???-???. by Ted H. Mes posted by 11 people skembel adgrativol iSEEM jonathaneisen jmeppley kinestetika Microbial-Ecology microbiology_nijmegen Katje Thaverkamp Olaf_Ilzins
	Assembling the Marine Metagenome, One Cell at a Time [My Copy] PLoS ONE, Vol. 4, No. 4. (23 April 2009), e5299. by Tanja Woyke, Gary Xie, Alex Copeland, et al.José M. González, Cliff Han, Hajnalka Kiss, Jimmy H. Saw, Pavel Senin, Chi Yang, Sourav Chatterji, Jan-Fang Cheng, Jonathan A. Eisen, Michael E. Sieracki, Ramunas Stepanauskas posted by 16 people jonathaneisen CorinYeats inquil dakelley hwright jonilaserson iSEEM jlgreen chocolate2009 jmeppley Papers recommended by the Roscoff Plankton Group Microbial-Ecology vaulot Thaverkamp neils skoch3
	Metagenomic analysis of two enhanced biological phosphorus removal (EBPR) sludge communities [My Copy] Nature Biotechnology, Vol. 24, No. 10. (24 September 2006), pp. 1263-1269. by Hector G. Martin, Natalia Ivanova, Victor Kunin, et al.Falk Warnecke, Kerrie W. Barry, Alice C. McHardy, Christine Yeates, Shaomei He, Asaf A. Salamov, Ernest Szeto, Eileen Dalin, Nik H. Putnam, Harris J. Shapiro, Jasmyn L. Pangilinan, Isidore Rigoutsos, Nikos C. Kyrpides, Linda L. Blackall, Katherine D. McMahon, Philip Hugenholtz posted by 10 people CorinYeats dutilh Thaverkamp idoerg microbiology_nijmegen kinestetika jmeppley rabu azazello wenhan
	Velvet: algorithms for de novo short read assembly using de Bruijn graphs. [My Copy] Genome research In Genome Research, Vol. 18, No. 5. (18 May 2008), pp. 821-829. by Daniel R. Zerbino, Ewan Birney posted by 51 people jts dutilh claire_jubin danbolser humburg ajsferreira vplagnol bedo jwhitney cthachuk hzoltan azazello ajbattle jmanning2k n00c carlk pachorip APRegier jbhiatt jonilaserson operon jahwa jsatkosk sandfire thegoose2 katholt robsyme djkt hpaces AaronDarling mhz idoerg jmcq Bioinformatics dswan dakelley jasontsai DeNovoAssembly-SIMR acn druvus natstreet nmohelli stajich Mycology farhat iris42 tharris Neeperando sharpton GustavoLacerda gdb
	Emergent Biogeography of Microbial Communities in a Model Ocean [My Copy] Science, Vol. 315, No. 5820. (30 March 2007), pp. 1843-1846. by Michael J. Follows, Stephanie Dutkiewicz, Scott Grant, Sallie W. Chisholm posted by 14 people skembel hwright jmeppley jdelcampo nurban emayorga cursonivel1 Microbial-Ecology cursonivel1 andrewirwin vrich jlgreen Green Lab iSEEM
	Metagenomic signatures of the Peru Margin subseafloor biosphere show a genetically distinct environment. [My Copy] Proceedings of the National Academy of Sciences of the United States of America, Vol. 105, No. 30. (29 July 2008), pp. 10583-10588. by Jennifer F. Biddle, Sorel Fitz-Gibbon, Stephan C. Schuster, Jean E. Brenchley, Christopher H. House posted by 8 people Thaverkamp michaelbarton jmeppley Microbial-Ecology sriesenfeld iSEEM skembel skato_toyaku
	Metagenome Annotation Using a Distributed Grid of Undergraduate Students [My Copy] PLoS Biol, Vol. 6, No. 11. (25 November 2008), e296. by Pascal Hingamp, Céline Brochier, Emmanuel Talla, Daniel Gautheret, Denis Thieffry, Carl Herrmann posted by 21 people daforerog operon azazello Bioinformatics - CRUK Stew JustinCrocker nuin jmeppley xingxu guhjy nitiniitk Centre de Recherches Interdisciplinaires dbikard dchughes druvus neils iSEEM djkt ptrobajo dullhunk treangen
	A consistency-based consensus algorithm for de novo and reference-guided sequence assembly of short reads [My Copy] Bioinformatics, Vol. 25, No. 9. (1 May 2009), pp. 1118-1124. by Tobias Rausch, Sergey Koren, Gennady Denisov, et al.David Weese, Anne-Katrin Emde, Andreas Doring, Knut Reinert posted by 24 people orzenil humburg jfr azazello hzoltan cthachuk GustavoLacerda jasontsai n00c nuin dakelley skembel Thaverkamp reyez TRHvidsten iSEEM djkt Bioinformatics hpaces APRegier pengchy natstreet druvus darian
	Real-Time DNA Sequencing from Single Polymerase Molecules [My Copy] Science, Vol. 323, No. 5910. (2 January 2009), pp. 133-138. by John Eid, Adrian Fehr, Jeremy Gray, et al.Khai Luong, John Lyle, Geoff Otto, Paul Peluso, David Rank, Primo Baybayan, Brad Bettman, Arkadiusz Bibillo, Keith Bjornson, Bidhan Chaudhuri, Frederick Christians, Ronald Cicero, Sonya Clark, Ravindra Dalal, Alex deWinter, John Dixon, Mathieu Foquet, Alfred Gaertner, Paul Hardenbol, Cheryl Heiner, Kevin Hester, David Holden, Gregory Kearns, Xiangxu Kong, Ronald Kuse, Yves Lacroix, Steven Lin, Paul Lundquist, Congcong Ma, Patrick Marks, Mark Maxham, Devon Murphy, Insil Park, Thang Pham, Michael Phillips, Joy Roy, Robert Sebra, Gene Shen, Jon Sorenson, Austin Tomaney, Kevin Travers, Mark Trulson, John Vieceli, Jeffrey Wegener, Dawn Wu, Alicia Yang, Denis Zaccarin, Peter Zhao, Frank Zhong, Jonas Korlach, Stephen Turner posted by 43 people jts hzoltan operon n00c kinestetika mtagaya iSEEM jlgreen dna idoerg absterga lukzky ImranRaoufMalik Archaeogenetics inesdesantiago 7ac5 wimufi cactus jasontsai mlangill melting polivares pkonings natstreet fhalbrit druvus felsani moernerlab samjlord Bioinformatics - CRUK Stew ghattem nedwards myzhang pengchy jbhiatt GeeSharpMinor GustavoLacerda azazello sconlan alexknight emptyhb caseybrown
	High-resolution metagenomics targets specific functional types in complex microbial communities. [My Copy] Nature biotechnology, Vol. 26, No. 9. (17 September 2008), pp. 1029-1034. by Marina G. Kalyuzhnaya, Alla Lapidus, Natalia Ivanova, et al.Alex C. Copeland, Alice C. McHardy, Ernest Szeto, Asaf Salamov, Igor V. Grigoriev, Dominic Suciu, Samuel R. Levine, Victor M. Markowitz, Isidore Rigoutsos, Susannah G. Tringe, David C. Bruce, Paul M. Richardson, Mary E. Lidstrom, Ludmila Chistoserdova posted by 13 people sameersoi Microbial-Ecology Thaverkamp EKotlarska jbhiatt jmeppley sriesenfeld skembel apostola Katje microbiology_nijmegen Huub_odc zwang
	The microbial ocean from genomes to biomes [My Copy] Nature, Vol. 459, No. 7244. (14 May 2009), pp. 200-206. by Edward F. Delong posted by 9 people roys jmeppley Mycology stajich Thaverkamp neils iSEEM djkt skembel
	Phymm and PhymmBL: metagenomic phylogenetic classification with interpolated Markov models [My Copy] Nature Methods, Vol. 6, No. 9. (02 August 2009), pp. 673-676. by Arthur Brady, Steven L. Salzberg posted by 14 people CorinYeats idoerg azazello Orengo Group Journal Picks robertrentzsch dakelley skembel Thaverkamp iSEEM sharpton Journal picks jbhiatt Mycology stajich
	Using pyrosequencing to shed light on deep mine microbial ecology. [My Copy] BMC Genomics, Vol. 7 (2006) by R. A. Edwards, B. Rodriguez-Brito, L. Wegley, et al.M. Haynes, M. Breitbart, D. M. Peterson, M. O. Saar, S. Alexander, E. C. Alexander, F. Rohwer posted by 10 people Thaverkamp iSEEM skembel jmeppley balicea rabu xingxu mcox darioacha werwiesel
	The tragedy of the uncommon: understanding limitations in the analysis of microbial diversity. [My Copy] The ISME journal (8 May 2008) by Stephen J J. Bent, Larry J J. Forney posted by 12 people lorenalizarraga80 microrita druvus Papers recommended by the Roscoff Plankton Group Microbial-Ecology vaulot jdelcampo jlgreen Green Lab iSEEM djkt skembel
	Strain-resolved community proteomics reveals recombining genomes of acidophilic bacteria [My Copy] Nature (07 March 2007) by Ian Lo, Vincent J. Denef, Nathan C. Verberkmoes, et al.Manesh B. Shah, Daniela Goltsman, Genevieve Dibartolo, Gene W. Tyson, Eric E. Allen, Rachna J. Ram, Chris J. Detter, Paul Richardson, Michael P. Thelen, Robert L. Hettich, Jillian F. Banfield posted by 10 people azazello sharpton kinestetika jmeppley rabu BoranKartal microbiology_nijmegen iSEEM jlgreen Green Lab
	From the Cover: A latitudinal diversity gradient in planktonic marine bacteria [My Copy] Proceedings of the National Academy of Sciences, Vol. 105, No. 22. (3 June 2008), pp. 7774-7778. by Jed A. Fuhrman, Joshua A. Steele, Ian Hewson, et al.Michael S. Schwalbach, Mark V. Brown, Jessica L. Green, James H. Brown posted by 11 people hwright paulm skembel skato_toyaku jlgreen Green Lab iSEEM vaulot Microbial-Ecology Papers recommended by the Roscoff Plankton Group djkt
	Molecular diversity and ecology of microbial plankton [My Copy] Nature, Vol. 437, No. 7057. (14 September 2005), pp. 343-348. by Stephen J. Giovannoni, Ulrich Stingl posted by 11 people hwright Stenuite jdelcampo beatrizfernandez African_Lakes_Limnology Microbial-Ecology vrich jmeppley jlgreen Green Lab iSEEM
	An Automated Phylogenetic Tree-Based Small Subunit rRNA Taxonomy and Alignment Pipeline (STAP) [My Copy] PLoS ONE, Vol. 3, No. 7. (2 July 2008), e2566. by Dongying Wu, Amber Hartman, Naomi Ward, Jonathan A. Eisen posted by 12 people microbiology_nijmegen Katje AaronDarling skembel sriesenfeld druvus Papers recommended by the Roscoff Plankton Group Microbial-Ecology vaulot skato_toyaku djkt iSEEM
	Microbial Biogeography: From Taxonomy to Traits [My Copy] Science, Vol. 320, No. 5879. (23 May 2008), pp. 1039-1043. by Jessica L. Green, Brendan J. Bohannan, Rachel J. Whitaker posted by 16 people hwright skembel Savage Lab, UCLA anphony druvus stajich Mycology vaulot Papers recommended by the Roscoff Plankton Group dbikard Centre de Recherches Interdisciplinaires djkt jdelcampo Microbial-Ecology dbensasson iSEEM
	Microbial community structure and its functional implications [My Copy] Nature, Vol. 459, No. 7244. (14 May 2009), pp. 193-199. by Jed A. Fuhrman posted by 6 people hwright jmeppley Thaverkamp iSEEM djkt skembel
	De novo bacterial genome sequencing: Millions of very short reads assembled on a desktop computer [My Copy] Genome Research, Vol. 18, No. 5. (10 May 2008), pp. 802-809. by David Hernandez, Patrice François, Laurent Farinelli, Magne Østerås, Jacques Schrenzel posted by 21 people jts n00c GeeSharpMinor pachorip operon druvus dakelley DeNovoAssembly-SIMR acn nmohelli GustavoLacerda jmeppley stajich azazello microbiology_nijmegen Katje Mycology gatech-compgenomics iris42 balicea Neeperando
	Statistical Methods for Detecting Differentially Abundant Features in Clinical Metagenomic Samples [My Copy] PLoS Comput Biol, Vol. 5, No. 4. (10 April 2009), e1000352. by James R. White, Niranjan Nagarajan, Mihai Pop posted by 15 people jfr Orengo Group Journal Picks CorinYeats dayjm taylor73 Thaverkamp hpaces sriesenfeld APRegier dswan druvus djkt iSEEM skembel idoerg
	The minimum information about a genome sequence (MIGS) specification [My Copy] Nature Biotechnology, Vol. 26, No. 5. (08 May 2008), pp. 541-547. by Dawn Field, George Garrity, Tanya Gray, et al.Norman Morrison, Jeremy Selengut, Peter Sterk, Tatiana Tatusova, Nicholas Thomson, Michael J. Allen, Samuel V. Angiuoli, Michael Ashburner, Nelson Axelrod, Sandra Baldauf, Stuart Ballard, Jeffrey Boore, Guy Cochrane, James Cole, Peter Dawyndt, Paul De Vos, Claude dePamphilis, Robert Edwards, Nadeem Faruque, Robert Feldman, Jack Gilbert, Paul Gilna, Frank O. Glockner, Philip Goldstein, Robert Guralnick, Dan Haft, David Hancock, Henning Hermjakob, Christiane Hertz-Fowler, Phil Hugenholtz, Ian Joint, Leonid Kagan, Matthew Kane, Jessie Kennedy, George Kowalchuk, Renzo Kottmann, Eugene Kolker, Saul Kravitz, Nikos Kyrpides, Jim Leebens-Mack, Suzanna E. Lewis, Kelvin Li, Allyson L. Lister, Phillip Lord, Natalia Maltsev, Victor Markowitz, Jennifer Martiny, Barbara Methe, Ilene Mizrachi, Richard Moxon, Karen Nelson, Julian Parkhill, Lita Proctor, Owen White, Susanna-Assunta Sansone, Andrew Spiers, Robert Stevens, Paul Swift, Chris Taylor, Yoshio Tateno, Adrian Tett, Sarah Turner, David Ussery, Bob Vaughan, Naomi Ward, Trish Whetzel, Ingio San Gil, Gareth Wilson, Anil Wipat posted by 18 people natstreet druvus barriot balajis thegoose2 idoerg Thaverkamp sconlan microbiology_nijmegen Katje allysonlister jmeppley dullhunk guhjy tharris jamselem neils jfr
	Genomic perspectives in microbial oceanography [My Copy] Nature, Vol. 437, No. 7057. (14 September 2005), pp. 336-342. by Edward F. Delong, David M. Karl posted by 12 people hwright microbiology_nijmegen kinestetika knaseanka Stenuite jdelcampo beatrizfernandez African_Lakes_Limnology Microbial-Ecology jlgreen Green Lab iSEEM
	MetaSim—A Sequencing Simulator for Genomics and Metagenomics [My Copy] PLoS ONE, Vol. 3, No. 10. (8 October 2008), e3373. by Daniel C. Richter, Felix Ott, Alexander F. Auch, Ramona Schmid, Daniel H. Huson posted by 15 people Mycology stajich jonilaserson BergmanLab polivares michaelbarton idoerg sriesenfeld iSEEM skembel guhjy azazello hpaces druvus nuin
	The Pervasive Effects of an Antibiotic on the Human Gut Microbiota, as Revealed by Deep 16S rRNA Sequencing [My Copy] PLoS Biol, Vol. 6, No. 11. (18 November 2008), e280. by Les Dethlefsen, Sue Huse, Mitchell L. Sogin, David A. Relman posted by 10 people Waikato - Erebus hexaquo azazello sconlan jmeppley treangen skembel maggiecontreras iSEEM djkt
	Ultrafast and memory-efficient alignment of short DNA sequences to the human genome. [My Copy] Genome biology, Vol. 10, No. 3. (2009), R25. by Ben Langmead, Cole Trapnell, Mihai Pop, Steven L. Salzberg posted by 45 people jts oannes mijam nuin jfr hzoltan cthachuk darshan fstrozzi adijr debasis bozdagd BergmanLab polivares torfinnnome n00c talponer jmcq rschulz SIMR bioinformatics ghattem operon humburg idonaldson mmartin iSEEM skembel dquest heliopais djkt GeeSharpMinor bertelsen darian Notre Dame Bioinformatics semrich dakelley idoerg vmsr hpaces admash pdexheimer mhamada fpattyn natstreet druvus
	Environmental Genomics Reveals a Single-Species Ecosystem Deep Within Earth [My Copy] Science, Vol. 322, No. 5899. (10 October 2008), pp. 275-278. by Dylan Chivian, Eoin L. Brodie, Eric J. Alm, et al.David E. Culley, Paramvir S. Dehal, Todd Z. DeSantis, Thomas M. Gihring, Alla Lapidus, Li-Hung Lin, Stephen R. Lowry, Duane P. Moser, Paul M. Richardson, Gordon Southam, Greg Wanger, Lisa M. Pratt, Gary L. Andersen, Terry C. Hazen, Fred J. Brockman, Adam P. Arkin, Tullis C. Onstott posted by 14 people yyfwuhan lflorez skembel claymans Papers recommended by the Roscoff Plankton Group Microbial-Ecology vaulot iSEEM djkt Katje dinnes neils microbiology_nijmegen kinestetika
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	A Molecular View of Microbial Diversity and the Biosphere [My Copy] Science, Vol. 276, No. 5313. (2 May 1997), pp. 734-740. by Norman R. Pace posted by 6 people idoerg azazello jmeppley jdelcampo Microbial-Ecology mcox
	Spatial scaling of microbial biodiversity [My Copy] Trends in Ecology & Evolution, Vol. 21, No. 9. (September 2006), pp. 501-507. by Jessica Green, Brendan J. Bohannan posted by 11 people fornstar liucun jmeppley cmm FAB-lab mcox vrich jlgreen Green Lab iSEEM djkt
	Identification of ribosomal RNA genes in metagenomic fragments [My Copy] Bioinformatics, Vol. 25, No. 10. (15 May 2009), pp. 1338-1340. by Ying Huang, Paul Gilna, Weizhong Li posted by 5 people iSEEM djkt Microbial-Ecology Thaverkamp jmeppley
	Toward Automatic Reconstruction of a Highly Resolved Tree of Life [My Copy] Science, Vol. 311, No. 5765. (3 March 2006), pp. 1283-1287. by Francesca D. Ciccarelli, Tobias Doerks, Christian von Mering, Christopher J. Creevey, Berend Snel, Peer Bork posted by 28 people darian pablocarb cmura adampah druvus fhsantanna microbiology_nijmegen kinestetika dparks Retchless knaseanka dpollard tny dchughes nirfriedman cmm azazello wenhan EisenLab FAB-lab G4ID Genetics-of-Gambling MBLAB maximilianh cmzmasek lonshy diamantis Ema
	Bioinformatics challenges of new sequencing technology. [My Copy] Trends in genetics : TIG, Vol. 24, No. 3. (11 March 2008), pp. 142-149. by Mihai Pop, Steven L. Salzberg posted by 37 people michaelbarton Jporci cthachuk hzoltan hpaces heliopais imaginatio operon daforerog n00c ptrobajo orzenil APRegier katholt kiekyon thegoose2 xingxu floatingpoint polivares yupu treangen jmcq delenickphd giovenko jmeppley dchughes djkt GustavoLacerda niallhaslam urgi Neeperando jfr tharris mariakmejia caseybrown yoonk druvus
	Alignment Uncertainty and Genomic Analysis [My Copy] Science, Vol. 319, No. 5862. (25 January 2008), pp. 473-476. by Karen M. Wong, Marc A. Suchard, John P. Huelsenbeck posted by 36 people Jporci operon walshtp darian ptrobajo friendpine skembel druvus treangen bpb aprasad dayjm pradiptaray dpollard tny djkt cjeans zwang lisa1 cactus biomcgary lilou EisenLab microbiology_nijmegen dandaman gjuggler renatomilani mclarenv youdon bpcusack guhjy jdelcampo adacier gracio timflutre jfr
	An obesity-associated gut microbiome with increased capacity for energy harvest. [My Copy] Nature, Vol. 444, No. 7122. (21 December 2006), pp. 1027-1031. by Peter J. Turnbaugh, Ruth E. Ley, Michael A. Mahowald, Vincent Magrini, Elaine R. Mardis, Jeffrey I. Gordon posted by 12 people Orengo Group Journal Picks robertrentzsch Thaverkamp Zephyrus ana jmeppley michC srfairclough wenhan structural_bioinformatics Bioinformatics GX
	Managing and analyzing next-generation sequence data. [My Copy] PLoS computational biology In PLoS Comput Biol, Vol. 5, No. 6. (26 June 2009), e1000369. by Brent G. Richter, David P. Sexton posted by 54 people frohike michaelbarton Jporci kevinemamy heliopais Bioinformatics Core Service jforment jfr burak idoerg Geknitics cthachuk hzoltan chvlyl sameersoi hpaces gdv GeeSharpMinor idonaldson darian daveGerrard tharris Yanno inesdesantiago jcaddy agbiotec humburg Zephyrus daforerog stubrown GustavoLacerda torfinnnome natstreet BergmanLab polivares orzenil kongl guhjy druvus n00c leemond31 nuin operon jasontsai jmeppley rdiaz Bioinformatics dswan reyez kshameer TRHvidsten djkt Journal picks ppgardne
	MetaGene: prokaryotic gene finding from environmental genome shotgun sequences [My Copy] Nucl. Acids Res., Vol. 34, No. 19. (14 November 2006), pp. 5623-5630. by Hideki Noguchi, Jungho Park, Toshihisa Takagi posted by 7 people dakelley Thaverkamp iSEEM jlgreen jmeppley alexl mcox
	Methods for comparative metagenomics. [My Copy] BMC bioinformatics, Vol. 10 Suppl 1, No. Suppl 1. (2009) by Daniel H. Huson, Daniel C. Richter, Suparna Mitra, Alexander F. Auch, Stephan C. Schuster posted by 8 people taylor73 idoerg Thaverkamp hpaces druvus jmeppley iSEEM jonathaneisen
	Single-cell identification in microbial communities by improved fluorescence in situ hybridization techniques [My Copy] Nature Reviews Microbiology, Vol. 6, No. 5., pp. 339-348. by Rudolf Amann, Bernhard M. Fuchs posted by 11 people hwright Katje microbiology_nijmegen vrich vaulot Microbial-Ecology Papers recommended by the Roscoff Plankton Group Huub_odc jlgreen Green Lab iSEEM
	Environmental sequence data from the Sargasso Sea reveal that the characteristics of genome reduction in Prochlorococcus are not a harbinger for an escalation in genetic drift. [My Copy] Molecular biology and evolution (8 October 2008) by Jinghua Hu, Jeffrey L L. Blanchard posted by 6 people iSEEM jlgreen Thaverkamp jmeppley wasmith75 operon
	Natural variation in SAR11 marine bacterioplankton genomes inferred from metagenomic data [My Copy] Biology Direct, Vol. 2 (07 November 2007), 27. by Larry J. Wilhelm, James H. Tripp, Scott A. Givan, Daniel P. Smith, Stephen J. Giovannoni posted by 6 people hwright idoerg jmeppley jlgreen Green Lab iSEEM
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	Microbial oceanography in a sea of opportunity [My Copy] Nature, Vol. 459, No. 7244. (14 May 2009), pp. 180-184. by Chris Bowler, David M. Karl, Rita R. Colwell posted by 5 people hwright jmeppley Microbial-Ecology Thaverkamp skembel
	Deciphering the evolution and metabolism of an anammox bacterium from a community genome. [My Copy] Nature, Vol. 440, No. 7085. (6 April 2006), pp. 790-794. by Marc Strous, Eric Pelletier, Sophie Mangenot, et al.Thomas Rattei, Angelika Lehner, Michael W. Taylor, Matthias Horn, Holger Daims, Delphine Bartol-Mavel, Patrick Wincker, Valérie Barbe, Nuria Fonknechten, David Vallenet, Béatrice Segurens, Chantal Schenowitz-Truong, Claudine Médigue, Astrid Collingro, Berend Snel, Bas E. Dutilh, Huub J. Op den Camp, Chris van der Drift, Irina Cirpus, Katinka T. van de Pas-Schoonen, Harry R. Harhangi, Laura van Niftrik, Markus Schmid, Jan Keltjens, Jack van de Vossenberg, Boran Kartal, Harald Meier, Dmitrij Frishman, Martijn A. Huynen, Hans-Werner W. Mewes, Jean Weissenbach, Mike S. Jetten, Michael Wagner, Denis Le Paslier posted by 9 people dutilh kinestetika azazello anammox microbiology_nijmegen vrich jlgreen Green Lab iSEEM
	Biopython: freely available Python tools for computational molecular biology and bioinformatics [My Copy] Bioinformatics, Vol. 25, No. 11. (1 June 2009), pp. 1422-1423. by Peter J. A. Cock, Tiago Antao, Jeffrey T. Chang, et al.Brad A. Chapman, Cymon J. Cox, Andrew Dalke, Iddo Friedberg, Thomas Hamelryck, Frank Kauff, Bartek Wilczynski, Michiel J. L. de Hoon posted by 50 people agomez akou eesruiz Geknitics pekrau Systems_Biology Computational_Systems_Biology Sergey_gerbek hwright jfr karinaecomp applebyb klexa rdiaz FabienneGranier thegoose Structural Biology Group TorVergata oteri cmzmasek jwm guhjy Journal picks AlexBateman daforerog ltitodem Thaverkamp baker-group sobolevnrm psique Bioinformatics dswan neils dullhunk bertelsen Vincent_Rouilly gwallau brianb jorisslob svenrahmann jmeppley VGreiff sjcockell druvus Software-Architecture OER_Open_Educational_Resources Method_Engineering_Services jago kshameer operon svozil
	Phylogeny-Aware Gap Placement Prevents Errors in Sequence Alignment and Evolutionary Analysis [My Copy] Science In Science, Vol. 320, No. 5883. (20 June 2008), pp. 1632-1635. by Ari Loytynoja, Nick Goldman posted by 34 people dfdong memerman operon TRHvidsten BioNica cmzmasek timflutre pradiptaray alexeid marti bpcusack hpaces dinnes gjuggler djkt ArtemPankin Khavkin's lab phoenixzxl jago marck imtechnology aprasad zwang bmaust bpb michaelbarton Schmidtc AbnerCYH gulsacan emptyhb iSEEM jlgreen Green Lab nuin
	Millimeter-scale genetic gradients and community-level molecular convergence in a hypersaline microbial mat [My Copy] Mol Syst Biol, Vol. 4 (3 June 2008) by Victor Kunin, Jeroen Raes, Kirk J. Harris, et al.John R. Spear, Jeffrey J. Walker, Natalia Ivanova, Christian von Mering, Brad M. Bebout, Norman R. Pace, Peer Bork, Philip Hugenholtz posted by 6 people jmeppley Microbial-Ecology Thaverkamp idoerg rabu hpaces
	The impact of next-generation sequencing technology on genetics [My Copy] Trends in Genetics, Vol. 24, No. 3. (11 February 2008), pp. 133-141. by E MARDIS, posted by 27 people rshe jasontsai n00c kiekyon jessopher daforerog psique idoerg jameswasmuth floatingpoint brdwilde neils jmcq jbsaltz guhjy dchughes djkt niallhaslam urgi zerojinx hpaces jlgreen Green Lab iSEEM cybaer1 giovenko druvus
	Use and misuse of the gene ontology annotations [My Copy] Nature Reviews Genetics, Vol. 9, No. 7. (13 May 2008), pp. 509-515. by Seung Yon Rhee, Valerie Wood, Kara Dolinski, Sorin Draghici posted by 47 people icecrown GustavoLacerda lisa1 singhsh epigenetics davidmam Thaverkamp druvus dullhunk 8_01 suizan dolchan Borelli Zephyrus VGreiff klo thomaskelder ilyashl phoenixzxl MarcoAlvarez isakemal bertelsen daforerog jfr djkt guhjy aheilbut mariakmejia cmzmasek A_Olympia logics of knowledge realzhang carlk roys gjuggler fpattyn RamuAnandakrishnan ptrobajo giovenko cabbagesofdoom tmmurali renatomilani capitall marck rvosa FAB-lab bpcusack
	An analysis of the Sargasso Sea resource and the consequences for database composition. [My Copy] BMC Bioinformatics, Vol. 7 (2006) by M. L. Tress, D. Cozzetto, A. Tramontano, A. Valencia posted by 8 people operon ana eoghanharr jmeppley structural_bioinformatics Bioinformatics Microbial-Ecology Thaverkamp
	Metabolic complementarity and genomics of the dual bacterial symbiosis of sharpshooters. [My Copy] PLoS Biol, Vol. 4, No. 6. (June 2006) by D. Wu, S. C. Daugherty, S. E. Van Aken, et al.G. H. Pai, K. L. Watkins, H. Khouri, L. J. Tallon, J. M. Zaborsky, H. E. Dunbar, P. L. Tran, N. A. Moran, J. A. Eisen posted by 6 people dutilh idoerg azazello operon djkt iSEEM
	Genomic insights that advance the species definition for prokaryotes. [My Copy] Proc Natl Acad Sci U S A, Vol. 102, No. 7. (15 February 2005), pp. 2567-2572. by K. T. Konstantinidis, J. M. Tiedje posted by 5 people iSEEM jmeppley Microbial-Ecology Thaverkamp rvgomes
	A simple, fast, and accurate method of phylogenomic inference [My Copy] Genome Biology, Vol. 9, No. 10. (13 October 2008), R151. by Martin Wu, Jonathan Eisen posted by 16 people jonathaneisen dakelley jeargle AaronDarling zwang cgaugain treangen microbiology_nijmegen Katje operon ellakat scryrps iSEEM djkt aramata druvus
	Counting the Uncountable: Statistical Approaches to Estimating Microbial Diversity [My Copy] Appl. Environ. Microbiol., Vol. 67, No. 10. (1 October 2001), pp. 4399-4406. by Jennifer B. Hughes, Jessica J. Hellmann, Taylor H. Ricketts, Brendan J. Bohannan posted by 9 people jmeppley Stenuite andrewirwin Biological oceanography vrich mcox Olaf_Ilzins djkt iSEEM
	Evolution of genes and genomes on the Drosophila phylogeny. [My Copy] Nature, Vol. 450, No. 7167. (8 November 2007), pp. 203-218. by Drosophila 12 Genomes Consortium, Andrew G. Clark, Michael B. Eisen, et al.Douglas R. Smith, Casey M. Bergman, Brian Oliver, Therese A. Markow, Thomas C. Kaufman, Manolis Kellis, William Gelbart, Venky N. Iyer, Daniel A. Pollard, Timothy B. Sackton, Amanda M. Larracuente, Nadia D. Singh, Jose P. Abad, Dawn N. Abt, Boris Adryan, Montserrat Aguade, Hiroshi Akashi, Wyatt W. Anderson, Charles F. Aquadro, David H. Ardell, Roman Arguello, Carlo G. Artieri, Daniel A. Barbash, Daniel Barker, Paolo Barsanti, Phil Batterham, Serafim Batzoglou, Dave Begun, Arjun Bhutkar, Enrico Blanco, Stephanie A. Bosak, Robert K. Bradley, Adrianne D. Brand, Michael R. Brent, Angela N. Brooks, Randall H. Brown, Roger K. Butlin, Corrado Caggese, Brian R. Calvi, A. Bernardo de Carvalho, Anat Caspi, Sergio Castrezana, Susan E. Celniker, Jean L. Chang, Charles Chapple, Sourav Chatterji, Asif Chinwalla, Alberto Civetta, Sandra W. Clifton, Josep M. Comeron, James C. Costello, Jerry A. Coyne, Jennifer Daub, Robert G. David, Arthur L. Delcher, Kim Delehaunty, Chuong B. Do, Heather Ebling, Kevin Edwards, Thomas Eickbush, Jay D. Evans, Alan Filipski, Sven Findeiss, Eva Freyhult, Lucinda Fulton, Robert Fulton, Ana C. Garcia, Anastasia Gardiner, David A. Garfield, Barry E. Garvin, Greg Gibson, Don Gilbert, Sante Gnerre, Jennifer Godfrey, Robert Good, Valer Gotea, Brenton Gravely, Anthony J. Greenberg, Sam Griffiths-Jones, Samuel Gross, Roderic Guigo, Erik A. Gustafson, Wilfried Haerty, Matthew W. Hahn, Daniel L. Halligan, Aaron L. Halpern, Gillian M. Halter, Mira V. Han, Andreas Heger, LaDeana Hillier, Angie S. Hinrichs, Ian Holmes, Roger A. Hoskins, Melissa J. Hubisz, Dan Hultmark, Melanie A. Huntley, David B. Jaffe, Santosh Jagadeeshan, William R. Jeck, Justin Johnson, Corbin D. Jones, William C. Jordan, Gary H. Karpen, Eiko Kataoka, Peter D. Keightley, Pouya Kheradpour, Ewen F. Kirkness, Leonardo B. Koerich, Karsten Kristiansen, Dave Kudrna, Rob J. Kulathinal, Sudhir Kumar, Roberta Kwok, Eric Lander, Charles H. Langley, Richard Lapoint, Brian P. Lazzaro, So-Jeong J. Lee, Lisa Levesque, Ruiqiang Li, Chiao-Feng F. Lin, Michael F. Lin, Kerstin Lindblad-Toh, Ana Llopart, Manyuan Long, Lloyd Low, Elena Lozovsky, Jian Lu, Meizhong Luo, Carlos A. Machado, Wojciech Makalowski, Mar Marzo, Muneo Matsuda, Luciano Matzkin, Bryant McAllister, Carolyn S. McBride, Brendan McKernan, Kevin McKernan, Maria Mendez-Lago, Patrick Minx, Michael U. Mollenhauer, Kristi Montooth, Stephen M. Mount, Xu Mu, Eugene Myers, Barbara Negre, Stuart Newfeld, Rasmus Nielsen, Mohamed A. Noor, Patrick O'Grady, Lior Pachter, Montserrat Papaceit, Matthew J. Parisi, Michael Parisi, Leopold Parts, Jakob S. Pedersen, Graziano Pesole, Adam M. Phillippy, Chris P. Ponting, Mihai Pop, Damiano Porcelli, Jeffrey R. Powell, Sonja Prohaska, Kim Pruitt, Marta Puig, Hadi Quesneville, Kristipati Ravi R. Ram, David Rand, Matthew D. Rasmussen, Laura K. Reed, Robert Reenan, Amy Reily, Karin A. Remington, Tania T. Rieger, Michael G. Ritchie, Charles Robin, Yu-Hui H. Rogers, Claudia Rohde, Julio Rozas, Marc J. Rubenfield, Alfredo Ruiz, Susan Russo, Steven L. Salzberg, Alejandro Sanchez-Gracia, David J. Saranga, Hajime Sato, Stephen W. Schaeffer, Michael C. Schatz, Todd Schlenke, Russell Schwartz, Carmen Segarra, Rama S. Singh, Laura Sirot, Marina Sirota, Nicholas B. Sisneros, Chris D. Smith, Temple F. Smith, John Spieth, Deborah E. Stage, Alexander Stark, Wolfgang Stephan, Robert L. Strausberg, Sebastian Strempel, David Sturgill, Granger Sutton, Granger G. Sutton, Wei Tao, Sarah Teichmann, Yoshiko N. Tobari, Yoshihiko Tomimura, Jason M. Tsolas, Vera L. Valente, Eli Venter, J. Craig Venter, Saverio Vicario, Filipe G. Vieira, Albert J. 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Acer, Lynne Aftuck, Allen Alexander, Peter An, Erica Anderson, Scott Anderson, Harindra Arachi, Marc Azer, Pasang Bachantsang, Andrew Barry, Tashi Bayul, Aaron Berlin, Daniel Bessette, Toby Bloom, Jason Blye, Leonid Boguslavskiy, Claude Bonnet, Boris Boukhgalter, Imane Bourzgui, Adam Brown, Patrick Cahill, Sheridon Channer, Yama Cheshatsang, Lisa Chuda, Mieke Citroen, Alville Collymore, Patrick Cooke, Maura Costello, Katie D'Aco, Riza Daza, Georgius De Haan, Stuart DeGray, Christina DeMaso, Norbu Dhargay, Kimberly Dooley, Erin Dooley, Missole Doricent, Passang Dorje, Kunsang Dorjee, Alan Dupes, Richard Elong, Jill Falk, Abderrahim Farina, Susan Faro, Diallo Ferguson, Sheila Fisher, Chelsea D. Foley, Alicia Franke, Dennis Friedrich, Loryn Gadbois, Gary Gearin, Christina R. Gearin, Georgia Giannoukos, Tina Goode, Joseph Graham, Edward Grandbois, Sharleen Grewal, Kunsang Gyaltsen, Nabil Hafez, Birhane Hagos, Jennifer Hall, Charlotte Henson, Andrew Hollinger, Tracey Honan, Monika D. Huard, Leanne Hughes, Brian Hurhula, M. Erii Husby, Asha Kamat, Ben Kanga, Seva Kashin, Dmitry Khazanovich, Peter Kisner, Krista Lance, Marcia Lara, William Lee, Niall Lennon, Frances Letendre, Rosie LeVine, Alex Lipovsky, Xiaohong Liu, Jinlei Liu, Shangtao Liu, Tashi Lokyitsang, Yeshi Lokyitsang, Rakela Lubonja, Annie Lui, Pen MacDonald, Vasilia Magnisalis, Kebede Maru, Charles Matthews, William McCusker, Susan McDonough, Teena Mehta, James Meldrim, Louis Meneus, Oana Mihai, Atanas Mihalev, Tanya Mihova, Rachel Mittelman, Valentine Mlenga, Anna Montmayeur, Leonidas Mulrain, Adam Navidi, Jerome Naylor, Tamrat Negash, Thu Nguyen, Nga Nguyen, Robert Nicol, Choe Norbu, Nyima Norbu, Nathaniel Novod, Barry O'Neill, Sahal Osman, Eva Markiewicz, Otero L. Oyono, Christopher Patti, Pema Phunkhang, Fritz Pierre, Margaret Priest, Sujaa Raghuraman, Filip Rege, Rebecca Reyes, Cecil Rise, Peter Rogov, Keenan Ross, Elizabeth Ryan, Sampath Settipalli, Terry Shea, Ngawang Sherpa, Lu Shi, Diana Shih, Todd Sparrow, Jessica Spaulding, John Stalker, Nicole Stange-Thomann, Sharon Stavropoulos, Catherine Stone, Christopher Strader, Senait Tesfaye, Talene Thomson, Yama Thoulutsang, Dawa Thoulutsang, Kerri Topham, Ira Topping, Tsamla Tsamla, Helen Vassiliev, Andy Vo, Tsering Wangchuk, Tsering Wangdi, Michael Weiand, Jane Wilkinson, Adam Wilson, Shailendra Yadav, Geneva Young, Qing Yu, Lisa Zembek, Danni Zhong, Andrew Zimmer, Zac Zwirko, David B. Jaffe, Pablo Alvarez, Will Brockman, Jonathan Butler, CheeWhye Chin, Sante Gnerre, Manfred Grabherr, Michael Kleber, Evan Mauceli, Iain MacCallum posted by 43 people aaltenburger biomcgary nuttpo daveGerrard Anachff GustavoLacerda mqbphcw3 rpetrenko gwallau chica jlncdr aprasad gjuggler lizbiogen jbsaltz druvus pradiptaray pengchy operon tmmurali indigoviolet djkt timflutre stajich zwang Garamonfok lp2 Bioinformatics EisenLab CharlesM hpaces caseybrown emptyhb urgi Mycology noor PetrovLab isimpson balicea cisevol BergmanLab Drosophila-Genetics-Genomics-2008 hdopazo
	Windshield splatter analysis with the Galaxy metagenomic pipeline [My Copy] Genome Research, Vol. 19, No. 11. (9 November 2009), pp. 2144-2153. by Sergei Kosakovsky Pond, Samir Wadhawan, Francesca Chiaromonte, et al.Guruprasad Ananda, Wen-Yu Chung, James Taylor, Anton Nekrutenko posted by 15 people dansullivanblk dutilh kiekyon Thaverkamp jmeppley seb1 microbiology_nijmegen Katje iSEEM djkt operon neils idonaldson jgill kshameer
	Community genomics in microbial ecology and evolution [My Copy] Nature Reviews Microbiology, Vol. 3, No. 6. (01 June 2005), pp. 489-498. by Eric E. Allen, Jillian F. Banfield posted by 8 people leechuck knaseanka jmeppley mcox jlgreen Green Lab iSEEM djkt
	Metagenomics: application of genomics to uncultured microorganisms. [My Copy] Microbiology and molecular biology reviews : MMBR, Vol. 68, No. 4. (December 2004), pp. 669-685. by Jo Handelsman posted by 10 people michaelbarton skato_toyaku knaseanka vrich mcox orzenil djkt Green Lab iSEEM jlgreen
	Gene-centric metagenomics of the fiber-adherent bovine rumen microbiome reveals forage specific glycoside hydrolases [My Copy] Proceedings of the National Academy of Sciences, Vol. 106, No. 6. (10 February 2009), pp. 1948-1953. by Jennifer M. Brulc, Dionysios A. Antonopoulos, Margret E. Berg Miller, et al.Melissa K. Wilson, Anthony C. Yannarell, Elizabeth A. Dinsdale, Robert E. Edwards, Edward D. Frank, Joanne B. Emerson, Pirjo Wacklin, Pedro M. Coutinho, Bernard Henrissat, Karen E. Nelson, Bryan A. White posted by 5 people idoerg iSEEM jlgreen skembel jmeppley
	The Microbial Engines That Drive Earth's Biogeochemical Cycles [My Copy] Science, Vol. 320, No. 5879. (23 May 2008), pp. 1034-1039. by Paul G. Falkowski, Tom Fenchel, Edward F. Delong posted by 11 people hwright thegoose2 nurban microbiology_nijmegen kinestetika tharris jdelcampo Microbial-Ecology djkt iSEEM fornstar
	How to write consistently boring scientific literature [My Copy] Oikos, Vol. 116, No. 5. (May 2007), pp. 723-727. by Kaj Sand-Jensen posted by 295 people dynaopto nilda1ma GustavoLacerda thiagomanel mojin atlantis2360 teichman gena gbierens kgrothoff fbaroni brembs di_hernandez scorullon Semantic-Social-Networks INK-SSCI-SCI@CiteuLike.org INK-SSCI-SCI hearton965 raf003 dejang jrfine421 wkretzsch mzygmunt pajoma ddimitriu mlj pcornill zio_tom78 tramullas alun willwade rabio librarymistress jcb1973 hideojoho mykanth123 HCCSProgram Journal picks jimburton yeminjiao JillianHowlett orrajabi marcela janneb goncalojustino clementinecornu isp Nezha jchiovaro michaelfieseler nathancooper amjedbj fredericraymond Geknitics debeerjonathan nuin thorium ELMlab pirapira arghavani Wikipedia Social Web qili joawe96 lperg paulymer dgront coherent ZhangXiatian richardmcgee andre7520 derchao mittinatten iskanbasal JoseBrox jstenman zhangrenxia janderz8 ulmer azwinkau sdaehne fjanoos eudominguezmartin jaspervoskuilen gvdh kimbatchelor welliegirl DavidG67 nellapower jimo75 sachingarg claudiushauptmann jmzhuo Horduna toszko chriswillmott mthomure Thaverkamp ibre sfalsharif lafuente Sergey_gerbek Torsten_Holmer aaltenburger tminze mmborges Dannycoutinho soniapereira Anita13 simonhearne rudalert ulrichs UWA Science Communication duel_jetty nmsx TVB timsenior livingthingdan alhoori poojamaj letillett christianholz amynmoore pvdg leonardo Med Anthro @ UF cgravlee bhengeveld ansobol jrw proportional wendygarnica jsatkosk eumelus pdpcosta AnthonySoprano wasteland93 buchgeher lmichan NIlz sxs732 artaban421 kieranhood rabit pauljhurtado SantoshKalwar aldra zchen75 nbawia Zephyrus jgebbie lanmuzi amadeusstevenson akuhn metatheory Fneesen hkimura beete CamilleH luciensamary jcreed R_C_Cordeiro thenose cyounkin robertlischke bspackman lyss Scholarly Communication sebpaquet c_hughes klauso kaiserm tomhebbron tarokiritani nGrenier girabbit jaia CulCog alexander_bauer Gaetan cjhall mdwelsh231 sniklas polivares MurphysLab ckai1 tux2000 petko_bogdanov carelcad Tomste yangjustinc thegoose michaelbanks mrt2k9 marekrud ibuch pawelsobko klexa tunheim Elley AJCann amoreno operon McCammon barry jod999 guhjy pick600 leliavski ombamawu mjoach Publicase Thermaneutist gwallau tnhh signori birte bertelsen mmuecke Mohan-S Dori2008 konstantinos charoy flips arsyed sjefarrar rohanlowe syah jjray zzh1986 brownstudy abellogin fungal sgeuter jkglenn psique anphony ajaymalik jjrohal markusd conradlee mschmer gkoenig natstreet BergmanLab cisevol silberbauer Khavkin's lab ArtemPankin druvus allysonlister dullhunk VGreiff dbk ultrascichick ahaeusler rickl brian toomash orca Borelli cmunson lfriedl sterovetta maike echinotrix awooga scpeters jford pratap williamdwalker sjones pseudopharm cjeans sensesublime TaqSys soumitri GeeSharpMinor tumo rebeccamancy ascharle suizan kaniko erklaerbaer boosda kdl Neuroscience STS ColDyn feminist_technoscience OrganizationResearch Enactment Academic Writing, Literacies and Discourse hejibo randomname
	Phylogenetic Signals in DNA Composition: Limitations and Prospects [My Copy] Mol Biol Evol, Vol. 26, No. 5. (1 May 2009), pp. 1163-1169. by Jan Mrazek posted by 7 people dakelley jmeppley skembel iSEEM djkt druvus nuin
	XplorSeq: A software environment for integrated management and phylogenetic analysis of metagenomic sequence data [My Copy] BMC Bioinformatics, Vol. 9, No. 1. (07 October 2008), 420. by Daniel Frank posted by 9 people Papers recommended by the Roscoff Plankton Group Microbial-Ecology vaulot iSEEM jlgreen Thaverkamp treangen ojabado nuin
	Assessing diversity and biogeography of aerobic anoxygenic phototrophic bacteria in surface waters of the Atlantic and Pacific Oceans using the Global Ocean Sampling expedition metagenomes [My Copy] Environmental Microbiology, Vol. 9, No. 6. (June 2007), pp. 1464-1475. by Yutin, Natalya, Suzuki, et al.T. Marcelino, Teeling, Hanno, Weber, Marc, Venter, J. Craig, Rusch, B. Douglas, Beja, Oded posted by 6 people hwright jmeppley vrich jlgreen Green Lab iSEEM
	Multivariate analyses in microbial ecology [My Copy] FEMS Microbiology Ecology, Vol. 62, No. 2. (2007), pp. 142-160. by Alban Ramette posted by 8 people hwright l00cas druvus Stenuite Olaf_Ilzins jmeppley vrich Microbial-Ecology
	Accurate taxonomy assignments from 16S rRNA sequences produced by highly parallel pyrosequencers [My Copy] Nucl. Acids Res., Vol. 36, No. 18. (1 October 2008), e120. by Zongzhi Liu, Todd Z. DeSantis, Gary L. Andersen, Rob Knight posted by 9 people esyoun skembel sconlan ojabado Papers recommended by the Roscoff Plankton Group Microbial-Ecology vaulot iSEEM jlgreen
	Exploring Microbial Diversity and Taxonomy Using SSU rRNA Hypervariable Tag Sequencing [My Copy] PLoS Genet, Vol. 4, No. 11. (21 November 2008), e1000255. by Susan M. Huse, Les Dethlefsen, Julie A. Huber, David M. Welch, David A. Relman, Mitchell L. Sogin posted by 7 people microbiology_nijmegen Huub_odc azazello sconlan skembel iSEEM djkt
	Microbial diversity and the genetic nature of microbial species [My Copy] Nature Reviews Microbiology, Vol. 6, No. 6. (07 May 2008), pp. 431-440. by Mark Achtman, Michael Wagner posted by 11 people kinestetika katholt microrita druvus skato_toyaku iSEEM jlgreen Green Lab vaulot Microbial-Ecology Papers recommended by the Roscoff Plankton Group
	Visual and statistical comparison of metagenomes [My Copy] Bioinformatics, Vol. 25, No. 15. (1 August 2009), pp. 1849-1855. by Suparna Mitra, Bernhard Klar, Daniel H. Huson posted by 17 people carlk polivares inesdesantiago taylor73 Orengo Group Journal Picks ollieredfernwork nuin Mycology stajich iSEEM sriesenfeld idoerg guhjy chrisamiller jmeppley neils druvus
	ALLPATHS: De novo assembly of whole-genome shotgun microreads [My Copy] Genome Research, Vol. 18, No. 5. (13 May 2008), pp. 810-820. by Jonathan Butler, Iain MacCallum, Michael Kleber, et al.Ilya A. Shlyakhter, Matthew K. Belmonte, Eric S. Lander, Chad Nusbaum, David B. Jaffe posted by 25 people ajsferreira n00c carlk jmanning2k APRegier pachorip jonilaserson operon thegoose2 natstreet AaronDarling mhz dakelley druvus stajich azazello hpaces Mycology tharris jwhitney iris42 Neeperando sharpton GustavoLacerda GeeSharpMinor
	CAMERA: A Community Resource for Metagenomics [My Copy] PLoS Biology, Vol. 5, No. 3. (1 March 2007), e75. by Rekha Seshadri, Saul A. Kravitz, Larry Smarr, Paul Gilna, Marvin Frazier posted by 5 people hwright jmeppley Microbial-Ecology Thaverkamp mariakmejia
	Predicting Prokaryotic Ecological Niches Using Genome Sequence Analysis [My Copy] PLoS ONE, Vol. 2, No. 8. (2007), e743. by Garret Suen, Barry S. Goldman, Roy D. Welch posted by 9 people jdelcampo Microbial-Ecology blobbybirdman Thaverkamp Myxo group kroos djkt iSEEM druvus
	SAR11 marine bacteria require exogenous reduced sulphur for growth [My Copy] Nature (12 March 2008) by James H. Tripp, Joshua B. Kitner, Michael S. Schwalbach, John W. H. Dacey, Larry J. Wilhelm, Stephen J. Giovannoni posted by 9 people sanxiyn Microbial-Ecology Thaverkamp mblwhoi vaulot Papers recommended by the Roscoff Plankton Group jlgreen Green Lab iSEEM
	Short pyrosequencing reads suffice for accurate microbial community analysis [My Copy] Nucl. Acids Res., Vol. 35, No. 18. (25 September 2007), e120. by Zongzhi Liu, Catherine Lozupone, Micah Hamady, Frederic D. Bushman, Rob Knight posted by 7 people skembel niallhaslam vrich Green Lab jlgreen djkt iSEEM
	Whole-genome re-sequencing. [My Copy] Current opinion in genetics & development In Genomes and evolution, Vol. 16, No. 6. (December 2006), pp. 545-552. by David R. Bentley posted by 18 people pristanna rshe druvus n00c anuskap mmartin jameswasmuth usagi-kirin jmeppley frohike indigoviolet dchughes azazello EisenLab G4ID Genetics-of-Gambling jo_davies kmdaily
	Increasing the coverage of a metapopulation consensus genome by iterative read mapping and assembly [My Copy] Bioinformatics, Vol. 25, No. 21. (1 November 2009), pp. 2878-2881. by Bas E. Dutilh, Martijn A. Huynen, Marc Strous posted by 11 people CorinYeats skennedy8 dakelley druvus kinestetika ThomasDOtto jasontsai skembel iSEEM sharpton jmeppley
	Human genomes as email attachments [My Copy] Bioinformatics, Vol. 25, No. 2. (15 January 2009), pp. 274-275. by Scott Christley, Yiming Lu, Chen Li, Xiaohui Xie posted by 30 people daforerog hzoltan idonaldson kshameer operon guhjy druvus n00c dnewburger djkt mmartin baker-group sobolevnrm jfr psique BergmanLab cisevol GeeSharpMinor neils Bioinformatics dswan dullhunk siebert hpiwowar nuin cthachuk rschulz treangen renatomilani jmeppley
	Application of 'next-generation' sequencing technologies to microbial genetics [My Copy] Nat Rev Micro, Vol. advanced online publication, No. 4. (23 February 2009), pp. 287-296. by Daniel MacLean, Jonathan D. G. Jones, David J. Studholme posted by 12 people GustavoLacerda nfparrish n00c kinestetika katholt iSEEM jlgreen roys robsyme hpaces druvus jmeppley
	CAMERA: A Community Resource for Metagenomics [My Copy] PLoS Biol, Vol. 5, No. 3. (13 March 2007), e75. by Rekha Seshadri, Saul A. Kravitz, Larry Smarr, Paul Gilna, Marvin Frazier posted by 8 people houniao007 azazello idoerg eweaver jdelcampo beatrizfernandez Microbial-Ecology AlexanderPico
	Genomics, environmental genomics and the issue of microbial species [My Copy] Heredity, Vol. aop, No. current. by D. M. Ward, F. M. Cohan, D. Bhaya, J. F. Heidelberg, M. Kühl, A. Grossman posted by 5 people druvus kinestetika Microbial-Ecology microbiology_nijmegen Thaverkamp
	Viruses manipulate the marine environment. [My Copy] Nature, Vol. 459, No. 7244. (14 May 2009), pp. 207-212. by Forest Rohwer, Rebecca Vega V. Thurber posted by 7 people bmezmer hwright tomhebbron skembel Thaverkamp iSEEM djkt