dagmar's Top Recommendations

These recommendations were last updated 26 minutes ago.

	Stochastic simulation of chemical kinetics. [My Copy] Annual review of physical chemistry, Vol. 58, No. 1. (2007), pp. 35-55. by Daniel T. Gillespie posted by 13 people gabe_rosser timflutre fierykylin devinli cannin jlidmar carmaus dIEMoSIRIS MoSi-Rostock dbikard Centre de Recherches Interdisciplinaires pmendes jjray
	The roles of APC and Axin derived from experimental and theoretical analysis of the Wnt pathway. [My Copy] PLoS Biol, Vol. 1, No. 1. (October 2003) by E. Lee, A. Salic, R. Krüger, R. Heinrich, M. W. Kirschner posted by 8 people cryptochrome mattjb carmaus ComplexAdaptiveSystems DSTO-CAS dIEMoSIRIS MoSi-Rostock tibbitts
	A consensus yeast metabolic network reconstruction obtained from a community approach to systems biology. [My Copy] Nature biotechnology, Vol. 26, No. 10. (09 October 2008), pp. 1155-1160. by Markus J. Herrgård, Neil Swainston, Paul Dobson, et al.Warwick B. Dunn, K. Yalçin Arga, Mikko Arvas, Nils Blüthgen, Simon Borger, Roeland Costenoble, Matthias Heinemann, Michael Hucka, Nicolas Le Novère, Peter Li, Wolfram Liebermeister, Monica L. Mo, Ana Paula P. Oliveira, Dina Petranovic, Stephen Pettifer, Evangelos Simeonidis, Kieran Smallbone, Irena Spasić, Dieter Weichart, Roger Brent, David S. Broomhead, Hans V. Westerhoff, Betül Kirdar, Merja Penttilä, Edda Klipp, Bernhard Ø. Palsson, Uwe Sauer, Stephen G. Oliver, Pedro Mendes, Jens Nielsen, Douglas B. Kell posted by 28 people kieransmallbone Hartlibian Research dadiamah m_j pmendes windman83 jfr raiyar neilswainston irenas MetabolicModeling JeremyZucker chasmand schwartzjmc pinney pauldobson alaninmcr allysonlister zwang guhjy dbk BergmanLab michaelbarton ptrobajo neils dullhunk pengchy tmmurali
	libAnnotationSBML: a library for exploiting SBML annotations. [My Copy] Bioinformatics (Oxford, England), Vol. 25, No. 17. (1 September 2009), pp. 2292-2293. by Neil Swainston, Pedro Mendes posted by 10 people Hartlibian Research guhjy irenas neilswainston jonathancooper jmuhlich jvb NaCTeM Effie dullhunk
	Asynchronous Event-Driven Particle Algorithms [My Copy] In PADS '07: Proceedings of the 21st International Workshop on Principles of Advanced and Distributed Simulation (2007), pp. 83-92. by Aleksandar Donev posted by 5 people mymodey fierykylin roland_ewald dIEMoSIRIS MoSi-Rostock
	Efficient formulation of the stochastic simulation algorithm for chemically reacting systems. [My Copy] J Chem Phys, Vol. 121, No. 9. (1 September 2004), pp. 4059-4067. by Y. Cao, H. Li, L. Petzold posted by 4 people fierykylin roland_ewald dIEMoSIRIS MoSi-Rostock
	On cellular automaton approaches to modeling biological cells [My Copy] (2002) by M. Alber, M. Kiskowski, J. Glazier, Y. Jiang posted by 5 people danlea mattjb ComplexAdaptiveSystems DSTO-CAS m_j
	Phyllotaxis [My Copy] Trends in Plant Science, Vol. 12, No. 4. (April 2007), pp. 143-150. by Cris Kuhlemeier posted by 2 people sstoma VirtualPlants
	Effect of reactant size on discrete stochastic chemical kinetics. [My Copy] The Journal of chemical physics, Vol. 126, No. 3. (21 January 2007) by D. T. Gillespie, S. Lampoudi, L. R. Petzold posted by 1 person jjray
	Improved leap-size selection for accelerated stochastic simulation [My Copy] The Journal of Chemical Physics, Vol. 119, No. 16. (2003), pp. 8229-8234. by Daniel T. Gillespie, Linda R. Petzold posted by 2 people petermilner matthewhflamm
	iSimBioSys: A Discrete Event Simulation Platform for 'in silico' study of biological systems [My Copy] In ANSS '06: Proceedings of the 39th annual Symposium on Simulation (2006), pp. 204-213. by Samik Ghosh, Preetam Ghosh, Kalyan Basu, Sajal K. Das, Simon Daefler
	Introducing variable ports and multi-couplings for cell biological modeling in DEVS [My Copy] In WSC '06: Proceedings of the 38th conference on Winter simulation (2006), pp. 832-840. by Adelinde M. Uhrmacher, Jan Himmelspach, Mathias Röhl, Roland Ewald
	Implementation of a discrete event simulator for biological self-assembly systems [My Copy] In WSC '05: Proceedings of the 37th conference on Winter simulation (2005), pp. 2223-2231. by Tiequan Zhang, Rori Rohlfs, Russell Schwartz
	Distributed Computing with Hierarchical Master-worker Paradigm for Parallel Branch and Bound Algorithm [My Copy] In CCGRID '03: Proceedings of the 3st International Symposium on Cluster Computing and the Grid (2003) by Kento Aida, Wataru Natsume, Yoshiaki Futakata
	Comparing Service-Oriented and Distributed Object Architectures [My Copy] On the Move to Meaningful Internet Systems 2005: CoopIS, DOA, and ODBASE In On the Move to Meaningful Internet Systems 2005: CoopIS, DOA, and ODBASE (2005), pp. 631-645. by Seán Baker, Simon Dobson posted by 1 person ilepile
	Brownian dynamics simulations of reversible reactions in one dimension [My Copy] J. Chem. Phys., Vol. 99 (October 1993), pp. 5396-5404. by A. L. Edelstein, N. Agmon
	A simulation algorithm for dynamic structure DEVS modeling [My Copy] In WSC '06: Proceedings of the 38th conference on Winter simulation (2006), pp. 815-822. by Hui Shang, Gabriel Wainer
	Computer methods for sampling from gamma, beta, poisson and bionomial distributions [My Copy] Computing, Vol. 12, No. 3. (1974), pp. 223-246. by J. Ahrens, U. Dieter
	Simulating Biochemical Networks at the Particle Level and in Time and Space: Green's Function Reaction Dynamics [My Copy] Physical Review Letters, Vol. 94, No. 12. (2005) by Jeroen S. van Zon, Pieter posted by 2 people ocs arjunan
	Three-dimensional Cellular Automata for Reaction-Diffusion Systems [My Copy] by Jorg Weimar posted by 1 person m_j
	Reaction-diffusion master equation: A comparison with microscopic simulations [My Copy] Physical Review E, Vol. 54, No. 6. (1 December 1996), 6139. by F. Baras, Malek M. Mansour
	Quantitative, Scalable Discrete-Event Simulation of Metabolic Pathways [My Copy] by Peter A. Meric, Michael J. Wise
	Quantitative modeling of stochastic systems in molecular biology by using stochastic Petri nets. [My Copy] Proceedings of the National Academy of Sciences of the United States of America, Vol. 95, No. 12. (9 June 1998), pp. 6750-6755. by P. J. Goss, J. Peccoud
	Class of cellular automata for reaction-diffusion systems. [My Copy] Physical review. E, Statistical physics, plasmas, fluids, and related interdisciplinary topics, Vol. 49, No. 2. (February 1994), pp. 1749-1752. by J. R. Weimar, J. P. Boon
	Cellular Automaton Models for Reaction Diffusion Equations [My Copy] Distributed Memory Computing Conference, 1991. Proceedings., The Sixth In Distributed Memory Computing Conference, 1991. Proceedings., The Sixth (1991), pp. 431-434. by J. R. Weimar, L. T. Watson, J. J. Tyson
	Discrete event systems specification in systems biology - a discussion of stochastic pi calculus and DEVS [My Copy] In WSC '05: Proceedings of the 37th conference on Winter simulation (2005), pp. 317-326. by Adelinde M. Uhrmacher, Corrado Priami
	Application of a stochastic name-passing calculus to representation and simulation of molecular processes [My Copy] Inf. Process. Lett., Vol. 80, No. 1. (October 2001), pp. 25-31. by Corrado Priami, Aviv Regev, Ehud Shapiro, William Silverman
	Consistency Maintenance using UNIFY [My Copy] (1995) by Anand Natrajan, Paul F. Reynolds
	Distributed Cell Biology Simulations with E-Cell System [My Copy] Grid Computing in Life Science (2005), pp. 20-31. by Masahiro Sugimoto, Kouichi Takahashi, Tomoya Kitayama, Daiki Ito, Masaru Tomita posted by 1 person wvangeit
	Microscopic simulation of a chemical instability [My Copy] J. Chem. Phys., Vol. 96 (February 1992), pp. 2000-2004. by M. Mareschal, A. de Wit
	Cellular growth and division in the Gillespie algorithm. [My Copy] Systems biology, Vol. 1, No. 1. (June 2004), pp. 121-128. by T. Lu, D. Volfson, L. Tsimring, J. Hasty
	A time-dependent extension of gillespie algorithm for biochemical stochastic $π$-calculus [My Copy] In SAC '06: Proceedings of the 2006 ACM symposium on Applied computing (2006), pp. 137-144. by Paola Lecca
	Hybrid simulation of cellular behavior [My Copy] Bioinformatics, Vol. 20, No. 3. (12 February 2004), pp. 316-322. by Thomas R. Kiehl, Robert M. Mattheyses, Melvin K. Simmons
	Developing An Hierarchical Simulator for Beta-binders [My Copy] In PADS '06: Proceedings of the 20th Workshop on Principles of Advanced and Distributed Simulation (2006), pp. 92-102. by Jan Himmelspach, Paola Lecca, Davide Prandi, Corado Priami, Paola Quaglia, Adelinde Uhrmacher
	Accelerated stochastic simulation of the stiff enzyme-substrate reaction. [My Copy] The Journal of chemical physics, Vol. 123, No. 14. (8 October 2005) by Y. Cao, D. T. Gillespie, L. R. Petzold
	Diffusion-Controlled Reactions [My Copy] Annual Review of Physical Chemistry, Vol. 34, No. 1. (1983), pp. 493-524. by D. F. Calef, J. M. Deutch
	An alternative to Gillespie's algorithm for simulating chemical reactions [My Copy] (2005) by R. Barbuti, Maggiolo A. Schettini, P. Milazzo, A. Troina
	Simultaneous Stochastic Simulation of Multiple Perturbations in Biological Network Models [My Copy] Computational Methods in Systems Biology (2007), pp. 15-31. by Werner Sandmann posted by 1 person m_j
	Brownian dynamics with hydrodynamic interactions [My Copy] The Journal of Chemical Physics, Vol. 69, No. 4. (1978), pp. 1352-1360. by Donald L. Ermak, J. A. Mccammon posted by 3 people matthewhflamm stephenbond Martin8223
	Stochastic modeling and simulation of gene networks - A review of the state-of-the-art research on stochastic simulations [My Copy] Signal Processing Magazine, IEEE In Signal Processing Magazine, IEEE, Vol. 24, No. 1. (2007), pp. 27-36. by X. Cai, X. Wang posted by 1 person m_j
	Atomistic simulations of competition between substrates binding to an enzyme. [My Copy] Biophysical journal, Vol. 82, No. 5. (May 2002), pp. 2326-2332. by A. H. Elcock posted by 3 people ras ocs Martin8223
	Oscillatory regulation of Hes1: Discrete stochastic delay modelling and simulation. [My Copy] PLoS Comput Biol, Vol. 2, No. 9. (8 September 2006) by M. Barrio, K. Burrage, A. Leier, T. Tian posted by 2 people m_j lenov
	Efficient, Correct Simulation of Biological Processes in the Stochastic Pi-calculus [My Copy] Computational Methods in Systems Biology (2007), pp. 184-199. by Andrew Phillips, Luca Cardelli posted by 2 people m_j mattis23
	A Simulation Environment for Multimodeling [My Copy] Discrete Event Dynamic Systems: Theory and Applications, Vol. 3, No. 2/3. (1993), pp. 151-171. by P. A. Fishwick posted by 1 person pverstra
	Using Petri Net tools to study properties and dynamics of biological systems. [My Copy] Journal of the American Medical Informatics Association : JAMIA, Vol. 12, No. 2. (r 2005), pp. 181-199. by Mor Peleg, Daniel Rubin, Russ B. Altman posted by 4 people laurabertens reyez bootsy csanford
	Master/Slave Computing on the Grid [My Copy] In Heterogeneous Computing Workshop (2000), pp. 3-16. by Gary Shao, Francine Berman, Richard Wolski posted by 2 people cklin Cait
	Multiplicity of the interactions of Wnt proteins and their receptors. [My Copy] Cell Signal, Vol. 19, No. 4. (April 2007), pp. 659-671. by A. Kikuchi, H. Yamamoto, S. Kishida posted by 2 people m_j guhjy
	Expression and Function of the Developmental Gene Wnt-4 during Experimental Acute Renal Failure in Rats [My Copy] J Am Soc Nephrol, Vol. 14, No. 5. (1 May 2003), pp. 1223-1233. by Yoshio Terada, Hiroyuki Tanaka, Tomokazu Okado, et al.Haruko Shimamura, Seiji Inoshita, Michio Kuwahara, Sei Sasaki posted by 2 people m_j guhjy
	Abundance, complexation, and trafficking of Wnt/beta-catenin signaling elements in response to Wnt3. [My Copy] J Mol Signal, Vol. 2, No. 1. (25 October 2007) by Noriko Yokoyama, Dezhong Yin, Craig C. Malbon posted by 2 people m_j tibbitts
	Cellular automata for reaction--diffusion systems [My Copy] Parallel Computing, Vol. 23, No. 11. (1997), pp. 1699-1715. by Jörg R. Weimar posted by 1 person Scis0000002
	A scalable framework for parallel discrete event simulations on desktop grids A scalable framework for parallel discrete event simulations on desktop grids [My Copy] Grid Computing, 2007 8th IEEE/ACM International Conference on In Grid Computing, 2007 8th IEEE/ACM International Conference on (2007), pp. 185-192. by Alfred Park, Alfred Park, Richard Fujimoto, Richard Fujimoto
	Continuous System Simulation [My Copy] (15 March 2006) by Francois E. Cellier, Ernesto Kofman posted by 2 people m_j winko
	The untapped potential of virtual game worlds to shed light on real world epidemics [My Copy] The Lancet Infectious Diseases, Vol. 7, No. 9. (September 2007), pp. 625-629. by Eric T. Lofgren, Nina H. Fefferman posted by 10 people rcrane skembel knowlengr m_j dumpa madhadron lshaw ibschwartz Torsten_Holmer tminze
	The Relationship between Stochastic and Deterministic Models for Chemical Reactions [My Copy] The Journal of Chemical Physics, Vol. 57, No. 7. (1972), pp. 2976-2978. by Thomas G. Kurtz posted by 2 people m_j ullahmukhtar
	Simulating mesoscopic reaction-diffusion systems using the Gillespie algorithm [My Copy] Physical Review E (Statistical, Nonlinear, and Soft Matter Physics), Vol. 71, No. 4. (2005) by David Bernstein posted by 2 people fierykylin ptupper
	Nested stochastic simulation algorithms for chemical kinetic systems with multiple time scales [My Copy] Journal of Computational Physics, Vol. 221, No. 1. (20 January 2007), pp. 158-180. by Weinan, Di Liu, Eric Vanden-Eijnden posted by 2 people ptupper khachsar
	Efficient step size selection for the tau-leaping simulation method. [My Copy] J Chem Phys, Vol. 124, No. 4. (28 January 2006) by Y. Cao, D. T. Gillespie, L. R. Petzold posted by 1 person ullahmukhtar
	Continuous System Modeling [My Copy] (20 December 1991) by François E. Cellier, Jurgen Greifeneder posted by 4 people m_j winko rh020 trm005
	Ab initio RNA folding by discrete molecular dynamics: from structure prediction to folding mechanisms. [My Copy] RNA (New York, N.Y.), Vol. 14, No. 6. (1 June 2008), pp. 1164-1173. by Feng Ding, Shantanu Sharma, Poornima Chalasani, Vadim V. Demidov, Natalia E. Broude, Nikolay V. Dokholyan posted by 4 people balewis carmaus Hosna physics
	Parallel DEVS: a parallel, hierarchical, modular, modeling formalism [My Copy] In WSC '94: Proceedings of the 26th conference on Winter simulation (1994), pp. 716-722. by Alex, Bernard P. Zeigler posted by 1 person carmaus
	O'Reillys Kochbuch für Geeks [My Copy] by Mela Eckenfels, Petra Hildebrandt posted by 1 person carmaus
	Introducing variable ports and multi-couplings for cell biological modeling in DEVS [My Copy] In WSC '06: Proceedings of the 38th conference on Winter simulation (2006), pp. 832-840. by Adelinde M. Uhrmacher, Jan Himmelspach, Mathias Röhl, Roland Ewald posted by 1 person carmaus
	A Multi-Formalism Modeling Composability Framework: Agent and Discrete-Event Models [My Copy] In DS-RT '05: Proceedings of the Ninth IEEE International Symposium on Distributed Simulation and Real-Time Applications (2005), pp. 249-256. by Hessam Sarjoughian, Dongping Huang posted by 5 people fierykylin krissp carmaus dIEMoSIRIS MoSi-Rostock
	Alternative signaling pathways: When, where and why? [My Copy] FEBS Letters, Vol. 579, No. 24. (10 October 2005), pp. 5265-5274. by Yunchen Gong, Zhaolei Zhang posted by 4 people carmaus arne dIEMoSIRIS MoSi-Rostock
	Model composability: formulating a research thrust: composable simulations [My Copy] In WSC '00: Proceedings of the 32nd conference on Winter simulation (2000), pp. 1577-1584. by Stephen Kasputis, Henry C. Ng posted by 5 people krissp carmaus Scis0000002 dIEMoSIRIS MoSi-Rostock
	Noise-Induced Min Phenotypes in E. coli [My Copy] PLoS Computational Biology, Vol. 2, No. 6. (1 June 2006), e80. by David Fange, Johan Elf posted by 4 people hadesnumb carmaus dIEMoSIRIS MoSi-Rostock
	Dynamic Models in Biology [My Copy] (27 March 2006) by Stephen P. Ellner, John Guckenheimer posted by 3 people carmaus dIEMoSIRIS MoSi-Rostock
	The role of composition and aggregation in modeling macromolecular regulatory networks [My Copy] In WSC '06: Proceedings of the 38th conference on Winter simulation (2006), pp. 1628-1636. by Clifford A. Shaffer, Ranjit Randhawa, John J. Tyson posted by 4 people krissp carmaus dIEMoSIRIS MoSi-Rostock
	Ten top reasons for systems biology to get into model-driven engineering [My Copy] In GaMMa '06: Proceedings of the 2006 international workshop on Global integrated model management (2006), pp. 55-58. by Magali R. Rouquié, Debora S. da Rosa posted by 5 people leemond31 wnpx carmaus dIEMoSIRIS MoSi-Rostock
	Mathematical models of protein kinase signal transduction. [My Copy] Mol Cell, Vol. 9, No. 5. (May 2002), pp. 957-970. by R. Heinrich, B. G. Neel, T. A. Rapoport posted by 3 people carmaus dIEMoSIRIS MoSi-Rostock
	Modeling and simulation of mobile agents [My Copy] Future Generation Computer Systems, Vol. 17, No. 2. (October 2000), pp. 107-118. by Adelinde M. Uhrmacher, Petra Tyschler, Dirk Tyschler posted by 5 people fierykylin roland_ewald carmaus dIEMoSIRIS MoSi-Rostock
	Computational Systems Biology [My Copy] (25 October 2005) by Andres Kriete, Roland Eils posted by 5 people Scis0000002 fishtank carmaus dIEMoSIRIS MoSi-Rostock
	Biomolecular Agents as Multi-behavioural Concurrent Objects [My Copy] Electronic Notes in Theoretical Computer Science In Proceedings of the First International Workshop on Methods and Tools for Coordinating Concurrent, Distributed and Mobile Systems (MTCoord 2005), Vol. 150, No. 1. (9 March 2006), pp. 31-49. by Denys Duchier, Celine Kuttler posted by 4 people roland_ewald carmaus dIEMoSIRIS MoSi-Rostock
	Building functional modules from molecular interactions [My Copy] Trends in Biochemical Sciences, Vol. 31, No. 9. (September 2006), pp. 497-508. by Klaus P. Hofmann, Christian M. Spahn, Reinhart Heinrich, Udo Heinemann posted by 4 people carmaus karfunkel dIEMoSIRIS MoSi-Rostock
	Beta-binders for Biological Quantitative Experiments [My Copy] Electronic Notes in Theoretical Computer Science In Proceedings of the 4th International Workshop on Quantitative Aspects of Programming Languages (QAPL 2006), Quantitative Aspects of Programming Languages 2006, Vol. 164, No. 3. (26 October 2006), pp. 101-117. by P. Degano, D. Prandi, C. Priami, P. Quaglia posted by 3 people carmaus dIEMoSIRIS MoSi-Rostock
	Power-law models of signal transduction pathways [My Copy] Cellular Signalling, Vol. In Press, Corrected Proof by Julio Vera, Eva Balsa-Canto, Peter Wellstead, Julio R. Banga, Olaf Wolkenhauer posted by 3 people carmaus dIEMoSIRIS MoSi-Rostock
	Predictive Modeling of Signaling Crosstalk during C. elegans Vulval Development [My Copy] PLoS Computational Biology, Vol. 3, No. 5. (1 May 2007), e92. by Jasmin Fisher, Nir Piterman, Alex Hajnal, Thomas A. Henzinger posted by 7 people benjaminsb kristgy roland_ewald carmaus ajgentles dIEMoSIRIS MoSi-Rostock
	Dynamic structures in modeling and simulation: a reflective approach [My Copy] ACM Trans. Model. Comput. Simul., Vol. 11, No. 2. (April 2001), pp. 206-232. by A. M. Uhrmacher posted by 4 people carmaus dIEMoSIRIS MoSi-Rostock wangyongfeng
	ICAT inhibits beta-catenin binding to Tcf/Lef-family transcription factors and the general coactivator p300 using independent structural modules. [My Copy] Mol Cell, Vol. 10, No. 3. (September 2002), pp. 573-584. by D. L. Daniels, W. I. Weis posted by 3 people carmaus dIEMoSIRIS MoSi-Rostock
	The APC tumor suppressor counteracts beta-catenin activation and H3K4 methylation at Wnt target genes. [My Copy] Genes Dev, Vol. 20, No. 5. (1 March 2006), pp. 586-600. by J. Sierra, T. Yoshida, C. A. Joazeiro, K. A. Jones posted by 3 people carmaus dIEMoSIRIS MoSi-Rostock
	Agents in bioinformatics, computational and systems biology [My Copy] Brief Bioinform, Vol. 8, No. 1. (1 January 2007), pp. 45-59. by Emanuela Merelli, Giuliano Armano, Nicola Cannata, et al.Flavio Corradini, Mark d'Inverno, Andreas Doms, Phillip Lord, Andrew Martin, Luciano Milanesi, Steffen Moller, Michael Schroeder, Michael Luck posted by 9 people oinizan daforerog ogurcan dullhunk roland_ewald carmaus dIEMoSIRIS MoSi-Rostock alanrw
	Systems biology by the rules: hybrid intelligent systems for pathway modeling and discovery. [My Copy] BMC systems biology, Vol. 1 (2007) by William J. Bosl posted by 8 people irenas JeremyZucker lukaswindhager wnpx carmaus fmenolascina dIEMoSIRIS MoSi-Rostock
	Multilevel Deconstruction of the In Vivo Behavior of Looped DNA-Protein Complexes. [My Copy] PLoS ONE, Vol. 2 (2007) by L. Saiz, J. M. Vilar posted by 3 people carmaus dIEMoSIRIS MoSi-Rostock
	Dynamics of in silico leukocyte rolling, activation, and adhesion [My Copy] BMC Systems Biology, Vol. 1, No. 1. (2007) by Jonathan Tang, Klaus Ley, Anthony C. Hunt posted by 3 people carmaus dIEMoSIRIS MoSi-Rostock
	Simulation of biochemical networks using COPASI: a complex pathway simulator [My Copy] In WSC '06: Proceedings of the 37th conference on Winter simulation (2006), pp. 1698-1706. by Sven Sahle, Ralph Gauges, J&\#252;rgen Pahle, et al.Natalia Simus, Ursula Kummer, Stefan Hoops, Christine Lee, Mudita Singhal, Liang Xu, Pedro Mendes posted by 4 people carmaus dIEMoSIRIS MoSi-Rostock pmendes
	A component-based simulation layer for JAMES [My Copy] Parallel and Distributed Simulation, 2004. PADS 2004. 18th Workshop on (2004), pp. 115-122. by J. Himmelspach, A. M. Uhrmacher posted by 3 people carmaus dIEMoSIRIS MoSi-Rostock
	Cell population modelling of yeast glycolytic oscillations. [My Copy] Biochem J, Vol. 368, No. Pt 2. (1 December 2002), pp. 433-446. by M. A. Henson, D. Müller, M. Reuss posted by 3 people carmaus dIEMoSIRIS MoSi-Rostock
	The ERATO Systems Biology Workbench: enabling interaction and exchange between software tools for computational biology. [My Copy] Pac Symp Biocomput (2002), pp. 450-461. by M. Hucka, A. Finney, H. M. Sauro, H. Bolouri, J. Doyle, H. Kitano posted by 3 people carmaus dIEMoSIRIS MoSi-Rostock
	UML as a cell and biochemistry modeling language. [My Copy] Biosystems, Vol. 80, No. 3. (June 2005), pp. 283-302. by K. Webb, T. White posted by 10 people abhishek_tiwari wigelius dalloliogm carmaus HCI-IHTE-TUT Web2 splicing yeast dIEMoSIRIS MoSi-Rostock
	Bioinformatik: Methoden zur Vorhersage von RNA- und Proteinstrukturen [My Copy] (01 March 2003) by Gerhard Steger posted by 3 people carmaus dIEMoSIRIS MoSi-Rostock
	Discrete event, multi-level simulation of metabolite channeling. [My Copy] Biosystems, Vol. 75, No. 1-3. (July 2004), pp. 29-41. by D. Degenring, M. Röhl, A. M. Uhrmacher posted by 4 people csanford carmaus dIEMoSIRIS MoSi-Rostock
	Wnt signaling: is the party in the nucleus? [My Copy] Genes Dev., Vol. 20, No. 11. (1 June 2006), pp. 1394-1404. by Karl Willert, Katherine A. Jones posted by 5 people cmzmasek emmahe carmaus dIEMoSIRIS MoSi-Rostock
	UML vs. classical vs. rhapsody statecharts: not all models are created equal [My Copy] Software and Systems Modeling, Vol. 6, No. 4. (21 December 2007), pp. 415-435. by Michelle Crane, Juergen Dingel posted by 3 people tg1w leonardo carmaus
	cPath: open source software for collecting, storing, and querying biological pathways [My Copy] BMC Bioinformatics, Vol. 7, No. 1. (13 November 2006), 497. by Ethan Cerami, Gary Bader, Benjamin Gross, Chris Sander posted by 13 people agonzale irenas fgibson shikin jfr dquest carmaus bootsy cerami dIEMoSIRIS MoSi-Rostock AlexanderPico srp33
	Individual-based Modeling and Ecology (Princeton Series in Theoretical and Computational Biology) [My Copy] (05 July 2005) by Volker Grimm, Steven F. Railsback posted by 11 people fjvico maburkitt GEB dlobo ascalise spirit_of_numenor larios carmaus ComplexAdaptiveSystems dIEMoSIRIS MoSi-Rostock
	Communicating and Mobile Systems: the Pi-Calculus [My Copy] (15 June 1999) by Robin Milner posted by 17 people scottmoody talototo stagediver bfraser kontakte AndreasSchropp cogumbreiro osh roland_ewald carmaus mattis23 laurajaros soulism jfischer dIEMoSIRIS MoSi-Rostock Grobi
	FluxAnalyzer: exploring structure, pathways, and flux distributions in metabolic networks on interactive flux maps. [My Copy] Bioinformatics, Vol. 19, No. 2. (22 January 2003), pp. 261-269. by S. Klamt, J. Stelling, M. Ginkel, E. D. Gilles posted by 5 people alexg balicea carmaus dIEMoSIRIS MoSi-Rostock
	Systems biology: its practice and challenges. [My Copy] Cell, Vol. 121, No. 4. (20 May 2005), pp. 511-513. by Alan Aderem posted by 7 people Badger LeightonP wnpx biosv carmaus dIEMoSIRIS MoSi-Rostock
	Automated modelling of signal transduction networks. [My Copy] BMC Bioinformatics, Vol. 3 (1 November 2002) by M. Steffen, A. Petti, J. Aach, P. D'haeseleer, G. Church posted by 7 people kentsis lfriedl iris_2001 carmaus kdl dIEMoSIRIS MoSi-Rostock
	Amplification and adaptation in regulatory and sensory systems. [My Copy] Science, Vol. 217, No. 4556. (16 July 1982), pp. 220-225. by D. E. Koshland, A. Goldbeter, J. B. Stock posted by 4 people balicea carmaus dIEMoSIRIS MoSi-Rostock