Douglas Kell's Top Recommendations

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	MAPMAN: a user-driven tool to display genomics data sets onto diagrams of metabolic pathways and other biological processes. [My Copy] Plant J, Vol. 37, No. 6. (March 2004), pp. 914-939. by O. Thimm, O. Bläsing, Y. Gibon, et al.A. Nagel, S. Meyer, P. Krüger, J. Selbig, L. A. Müller, S. Y. Rhee, M. Stitt posted by 3 people LeightonP eweaver pmendes
	Metabolic pathway analysis: basic concepts and scientific applications in the post-genomic era. [My Copy] Biotechnol Prog, Vol. 15, No. 3. (n 1999), pp. 296-303. by C. H. Schilling, S. Schuster, B. O. Palsson, R. Heinrich posted by 3 people camster dbk-lab pmendes
	Reaction routes in biochemical reaction systems: algebraic properties, validated calculation procedure and example from nucleotide metabolism. [My Copy] Journal of mathematical biology, Vol. 45, No. 2. (August 2002), pp. 153-181. by S. Schuster, C. Hilgetag, J. H. Woods, D. A. Fell posted by 5 people schwartzjmc camster Borelli dbk-lab pmendes
	The large-scale organization of metabolic networks [My Copy] Nature, Vol. 407, No. 6804. (05 October 2000), pp. 651-654. by H. Jeong, B. Tombor, R. Albert, Z. N. Oltvai, A. L. Barabasi posted by 34 people jmenche tomhebbron asadrahman sergiun GEB dlobo schwartzjmc muraken kentz camster snuppepuppan jpmague mague alexisgallagher bjorns Borelli shivaram lfriedl cmmorel alexg Shirakawa ddahlem gcalda grahamc jrbanga karfunkel dbk-lab kdl Evangelia shung pmendes stefanoallesina shikin dylanwalker
	Artificial gene networks for objective comparison of analysis algorithms [My Copy] Bioinformatics In Bioinformatics, Vol. 19, No. suppl_2. (27 September 2003), pp. ii122-129. by Pedro Mendes, Wei Sha, Keying Ye posted by 12 people meanerelk fastjoe23 poirel tonamswish kaarsinogen camster tmmurali dragonrez lfriedl dbk-lab kdl pmendes
	Modelling Bacterial Degradation of Organic Compounds with Genetic Networks [My Copy] J Theor Biol, Vol. 189, No. 1. (7 November 1997), pp. 107-119. by R. Serra, M. Villani posted by 3 people camster rmj001 dbk-lab
	Complexity, Self-Organization and Selection [My Copy] Biology and Philosophy, Vol. 16, No. 5. (November 2001), pp. 653-682. by R. C. Richardson posted by 15 people camster betainverse korakot sccook karbak rmj001 PiersYoung nathanielvirgo livingthingdan nicg kray Philosophy_of_Information dbk-lab Blog_and_Wiki_Research livingthing
	The Pareto Archived Evolution Strategy: A New Baseline Algorithm for Pareto Multiobjective Optimisation [My Copy] In Proceedings of the Congress on Evolutionary Computation, Vol. 1 (June-September 1999), pp. 98-105. by Joshua Knowles, David Corne edited by Peter J. Angeline, Zbyszek Michalewicz, Marc Schoenauer, Xin Yao, Ali Zalzala posted by 3 people camster rmj001 dbk-lab
	Problems with Fitting to the Power-Law Distribution [My Copy] (13 August 2004) by Michel L. Goldstein, Steven A. Morris, Gary G. Yen posted by 18 people jfelipe camster snuppepuppan nettraq pboothe korakot sccook rmj001 brian elsantosneto lfriedl proportional tuttle Philosophy_of_Information dbk-lab Blog_and_Wiki_Research kdl Minty
	The segment polarity network is a robust developmental module [My Copy] Nature, Vol. 406, No. 6792. (13 July 2000), pp. 188-192. by George von Dassow, Eli Meir, Edwin M. Munro, Garrett M. Odell posted by 12 people fastjoe23 joseph_x_zhou GEB dlobo lenov camster rklancer rmj001 mrm adepace dbk-lab EisenLab
	Enzyme kinetic studies from progress curves. [My Copy] The Biochemical journal, Vol. 233, No. 2. (15 January 1986), pp. 599-605. by E. I. Canela, R. Franco posted by 2 people pmendes biblio24
	Enzyme inhibition in open systems. Superiority of uncompetitive agents. [My Copy] The Journal of biological chemistry, Vol. 271, No. 10. (8 March 1996), pp. 5347-5352. by A. M. Westley, J. Westley posted by 1 person pmendes
	Why is uncompetitive inhibition so rare? A possible explanation, with implications for the design of drugs and pesticides. [My Copy] FEBS letters, Vol. 203, No. 1. (14 July 1986), pp. 3-6. by A. Cornish-Bowden posted by 1 person pmendes
	Estimation of the initial velocity of enzyme-catalysed reactions by non-linear regression analysis of progress curves. [My Copy] The Biochemical journal, Vol. 228, No. 1. (15 May 1985), pp. 55-60. by R. G. Duggleby posted by 1 person pmendes
	The kinetics of coupled enzyme reactions. Applications to the assay of glucokinase, with glucose 6-phosphate dehydrogenase as coupling enzyme. [My Copy] The Biochemical journal, Vol. 141, No. 1. (July 1974), pp. 205-209. by A. C. Storer, A. Cornish-Bowden posted by 1 person pmendes
	The nature of experimental error in enzyme kinetic measurments. [My Copy] The Biochemical journal, Vol. 151, No. 2. (November 1975), pp. 361-367. by A. C. Storer, M. G. Darlison, A. Cornish-Bowden posted by 1 person pmendes
	Actor-Critic Algorithms [My Copy] In SIAM Journal on Control and Optimization, Vol. 42 (2001), pp. 1008-1014. by Vijay R. Konda, John, John N. Tsitsiklis posted by 1 person pmendes
	The Systems Biology Graphical Notation [My Copy] Nature Biotechnology, Vol. 27, No. 8. (07 August 2009), pp. 735-741. by Nicolas L. Novere, Michael Hucka, Huaiyu Mi, et al.Stuart Moodie, Falk Schreiber, Anatoly Sorokin, Emek Demir, Katja Wegner, Mirit I. Aladjem, Sarala M. Wimalaratne, Frank T. Bergman, Ralph Gauges, Peter Ghazal, Hideya Kawaji, Lu Li, Yukiko Matsuoka, Alice Villeger, Sarah E. Boyd, Laurence Calzone, Melanie Courtot, Ugur Dogrusoz, Tom C. Freeman, Akira Funahashi, Samik Ghosh, Akiya Jouraku, Sohyoung Kim, Fedor Kolpakov, Augustin Luna, Sven Sahle, Esther Schmidt, Steven Watterson, Guanming Wu, Igor Goryanin, Douglas B. Kell, Chris Sander, Herbert Sauro, Jacky L. Snoep, Kurt Kohn, Hiroaki Kitano posted by 45 people heliopais kshameer nuin singhsh greg tonamswish pablocarb josepe abc623 daforerog abhishek_tiwari Orengo Group Journal Picks robertrentzsch ngehlenborg pekrau thegoose bertelsen fgibson Borelli thomaskelder pmendes dullhunk polivares chasmand brianb roys torfinnnome guhjy Zephyrus lenov reyez allysonlister apocapoc renatomilani VGreiff druvus sjcockell Journal picks jandot megraw leliavski frohike Neuroblastoma fpattyn jhyang
	A quick guide to organizing computational biology projects. [My Copy] PLoS computational biology, Vol. 5, No. 7. (31 July 2009), e1000424. by William Stafford S. Noble posted by 75 people leliavski dgront paulymer FAB-lab rvosa installe burak annakcroft brianb nuin skembel pekrau Sergey_gerbek mordiano remoteFuture Yanno Pedro Martinez EvoDevo lab Barcelona aaltenburger marekrud guhjy dolchan frohike operon Orengo Group Journal Picks CorinYeats artaban421 antonkratz tomhebbron maren bayesian daveGerrard JoeBanks jcaddy somak bertelsen ptrobajo nperoni daforerog mmwoodman charris5 GustavoLacerda pmendes fgibson rdiaz Zephyrus heliopais franklu310 lmichan silberbauer leemond31 jlangdon robfsouza Bioinformatics - CRUK Stew pmung reyez kshameer djkt pawelsobko jjray dswan apaydin renatomilani VGreiff cabbagesofdoom ccsbs wei_tang fenghezi BergmanLab cisevol structural_bioinformatics McCammon barry sdaehne druvus
	Searching NCBI databases using Entrez. [My Copy] Current protocols in bioinformatics / editoral board, Andreas D. Baxevanis ... [et al.], Vol. Chapter 1 (December 2008) by A. D. Baxevanis posted by 1 person pmendes
	The NCBI data model. [My Copy] Methods of biochemical analysis, Vol. 39 (1998), pp. 121-144. by J. M. Ostell, J. A. Kans posted by 1 person pmendes
	The use of the direct linear plot for determining initial velocities. [My Copy] The Biochemical journal, Vol. 149, No. 2. (August 1975), pp. 305-312. by A. Cornish-Bowden posted by 2 people pmendes biblio24
	Progress being made on standards for use in data sharing [My Copy] Nature, Vol. 456, No. 7218. (05 November 2008), pp. 29-29. by Douglas B. Kell posted by 4 people pmendes applebyb druvus dullhunk
	How can biochemical reactions within cells differ from those in test tubes? [My Copy] J Cell Sci, Vol. 119, No. 14. (15 July 2006), pp. 2863-2869. by Allen P. Minton posted by 3 people pmendes raik ocs
	Dynamic simulation and metabolic re-design of a branched pathway using linlog kinetics. [My Copy] Metabolic engineering, Vol. 5, No. 3. (July 2003), pp. 164-176. by D. Visser, J. J. Heijnen posted by 1 person pmendes
	Mathematical modeling identifies Smad nucleocytoplasmic shuttling as a dynamic signal-interpreting system. [My Copy] Proceedings of the National Academy of Sciences of the United States of America, Vol. 105, No. 18. (6 May 2008), pp. 6608-6613. by B. Schmierer, A. L. Tournier, P. A. Bates, C. S. Hill posted by 3 people heliopais guhjy pmendes
	Composing Globally Consistent Pathway Parameter Estimates Through Belief Propagation [My Copy] Algorithms in Bioinformatics (2007), pp. 420-430. by Geoffrey Koh, Lisa Tucker-Kellogg, David Hsu, P. Thiagarajan posted by 1 person pmendes
	Macromolecular crowding: an important but neglected aspect of the intracellular environment [My Copy] Current Opinion in Structural Biology, Vol. 11, No. 1. (1 February 2001), pp. 114-119. by John R. Ellis posted by 3 people pmendes ras csanford
	Extraction of elementary rate constants from global network analysis of E. coli central metabolism [My Copy] BMC Systems Biology, Vol. 2, No. 1. (2008) by Jiao Zhao, Douglas Ridgway, Gordon Broderick, Andriy Kovalenko, Michael Ellison posted by 2 people pmendes jrbanga
	Algorithms for Minimisation Without Derivatives (Automatic Computation) [My Copy] by Richard P. Brent posted by 2 people chrisatcite pmendes
	Discrete stochastic simulation of cell signaling: comparison of computational tools [My Copy] Engineering in Medicine and Biology Society, 2006. EMBS '06. 28th Annual International Conference of the IEEE In Engineering in Medicine and Biology Society, 2006. EMBS '06. 28th Annual International Conference of the IEEE (2006), pp. 2013-2016. by Tiina Manninen, Eeva Makiraatikka, Antti Ylipaa, Antti Pettinen, Kalle Leinonen, Marja-Leena Linne posted by 1 person pmendes
	Synthesis of dihydropyridines and pyridines from imines and alkynes via C-H activation. [My Copy] Journal of the American Chemical Society, Vol. 130, No. 11. (19 March 2008), pp. 3645-3651. by D. A. Colby, R. G. Bergman, J. A. Ellman posted by 1 person pmendes
	A connectionist model of development. [My Copy] Journal of theoretical biology, Vol. 152, No. 4. (21 October 1991), pp. 429-453. by E. Mjolsness, D. H. Sharp, J. Reinitz posted by 1 person pmendes
	A mathematical framework for describing and analysing gene regulatory networks. [My Copy] Journal of theoretical biology, Vol. 176, No. 2. (21 September 1995), pp. 291-300. by T. Mestl, E. Plahte, S. W. Omholt posted by 1 person pmendes
	Modeling gene expression with differential equations. [My Copy] Pacific Symposium on Biocomputing. Pacific Symposium on Biocomputing (1999), pp. 29-40. by T. Chen, H. L. He, G. M. Church posted by 3 people schwartzjmc nicholasflann pmendes
	A computational algebra approach to the reverse engineering of gene regulatory networks. [My Copy] Journal of theoretical biology, Vol. 229, No. 4. (21 August 2004), pp. 523-537. by R. Laubenbacher, B. Stigler posted by 1 person pmendes
	Homeostasis and differentiation in random genetic control networks. [My Copy] Nature, Vol. 224, No. 5215. (11 October 1969), pp. 177-178. by S. Kauffman posted by 1 person pmendes
	The large scale structure and dynamics of gene control circuits: an ensemble approach. [My Copy] Journal of theoretical biology, Vol. 44, No. 1. (March 1974), pp. 167-190. by S. Kauffman posted by 1 person pmendes
	Insights into Zn2+ homeostasis in neurons from experimental and modeling studies. [My Copy] American journal of physiology. Cell physiology, Vol. 294, No. 3. (March 2008) by R. A. Colvin, A. I. Bush, I. Volitakis, et al.C. P. Fontaine, D. Thomas, K. Kikuchi, W. R. Holmes posted by 1 person pmendes
	Metabolic control mechanisms. 5. A solution for the equations representing interaction between glycolysis and respiration in ascites tumor cells. [My Copy] The Journal of biological chemistry, Vol. 235 (August 1960), pp. 2426-2439. by B. CHANCE, D. GARFINKEL, J. HIGGINS, B. HESS posted by 1 person pmendes
	A HYBRID COMPUTER FOR THE INVESTIGATION OF CHEMICAL REACTIONS: THE JOHNSON FOUNDATION ELECTRONIC COMPUTER, MARK II. [My Copy] Annals of the New York Academy of Sciences, Vol. 115 (31 July 1964), pp. 1025-1037. by J. J. HIGGINS posted by 1 person pmendes
	CYCLIC AND OSCILLATORY RESPONSES OF METABOLIC PATHWAYS INVOLVING CHEMICAL FEEDBACK AND THEIR COMPUTER REPRESENTATIONS. [My Copy] Annals of the New York Academy of Sciences, Vol. 115 (31 July 1964), pp. 1010-1024. by B. CHANCE, A. GHOSH, J. J. HIGGINS, P. K. MAITRA posted by 1 person pmendes
	Analogue and digital computer representations of biochemical processes. [My Copy] Federation proceedings, Vol. 21 (b 1962), pp. 75-86. by B. CHANCE, J. J. HIGGINS, D. GARFINKEL posted by 1 person pmendes
	Role of substrate inhibition kinetics in enzymatic chemical oscillations. [My Copy] Biophysical journal, Vol. 67, No. 4. (October 1994), pp. 1414-1428. by P. Shen, R. Larter posted by 1 person pmendes
	Parameter optimization in S-system models. [My Copy] BMC systems biology, Vol. 2, No. 1. (2008) by Marco Vilela, I-Chun C. Chou, Susana Vinga, Ana Tereza T. Vasconcelos, Eberhard O. Voit, Jonas S. Almeida posted by 1 person pmendes
	State of the nation in data integration for bioinformatics [My Copy] Journal of Biomedical Informatics, Vol. 41, No. 5. (5 October 2008), pp. 687-693. by C. Goble, R. Stevens posted by 12 people pmendes mtaschuk druvus simonmcbride agbiotec fgibson guhjy dullhunk cjhall alanrw winterschlaefer dansullivanblk
	Hybrid optimization method with general switching strategy for parameter estimation [My Copy] BMC Systems Biology, Vol. 2, No. 1. (2008) by Eva B. Canto, Martin Peifer, Julio Banga, Jens Timmer, Christian Fleck posted by 3 people biehl xili03 pmendes
	Global parameter search reveals design principles of the mammalian circadian clock [My Copy] BMC Systems Biology, Vol. 2, No. 1. (2008), 22. by James Locke, Pal Westermark, Achim Kramer, Hanspeter Herzel posted by 3 people jaia agomez pmendes
	Parallel analysis of transcript and metabolic profiles: a new approach in systems biology. [My Copy] EMBO Rep, Vol. 4, No. 10. (October 2003), pp. 989-993. by E. Urbanczyk-Wochniak, A. Luedemann, J. Kopka, et al.J. Selbig, U. Roessner-Tunali, L. Willmitzer, A. R. Fernie posted by 1 person pmendes
	A study of particle swarm optimization particle trajectories [My Copy] Information Sciences, Vol. 176, No. 8. (22 April 2006), pp. 937-971. by F. van den Bergh, A. P. Engelbrecht posted by 2 people pmendes laura_prada
	Gene dosage balance in cellular pathways: implications for dominance and gene duplicability. [My Copy] Genetics, Vol. 168, No. 1. (September 2004), pp. 569-574. by Reiner A. Veitia posted by 3 people sbottani bpcusack pmendes
	The molecular basis of dominance. [My Copy] Genetics, Vol. 97, No. 3-4. (r 1981), pp. 639-666. by H. Kacser, J. A. Burns posted by 2 people bpcusack pmendes
	The control of flux. [My Copy] Symp Soc Exp Biol, Vol. 27 (1973), pp. 65-104. by H. Kacser, J. A. Burns posted by 1 person pmendes
	Making cells work--metabolic engineering for everyone. [My Copy] Trends Biotechnol, Vol. 15, No. 1. (January 1997), pp. 6-7. by P. Mendes, D. Kell posted by 1 person pmendes
	Bioinformatics for rice resources. [My Copy] Novartis Found Symp, Vol. 236 (2001) by B. W. Sobral, H. Mangalam, A. Siepel, P. Mendes, R. Pecherer, G. McLaren posted by 1 person pmendes
	In situ kinetic analysis of glyoxalase I and glyoxalase II in Saccharomyces cerevisiae. [My Copy] Eur J Biochem, Vol. 268, No. 14. (July 2001), pp. 3930-3936. by A. M. Martins, P. Mendes, C. Cordeiro, A. P. Freire posted by 1 person pmendes
	Metabolic control in integrated biochemical systems. [My Copy] Eur J Biochem, Vol. 269, No. 18. (September 2002), pp. 4399-4408. by A. de la Fuente, J. L. Snoep, H. V. Westerhoff, P. Mendes posted by 1 person pmendes
	Quantifying gene networks with regulatory strengths. [My Copy] Mol Biol Rep, Vol. 29, No. 1-2. (2002), pp. 73-77. by A. de la Fuente, P. Mendes posted by 1 person pmendes
	Gene networks: how to put the function in genomics. [My Copy] Trends Biotechnol, Vol. 20, No. 11. (November 2002), pp. 467-472. by P. Brazhnik, A. de la Fuente, P. Mendes posted by 2 people pmendes frohike
	myo-inositol oxygenase offers a possible entry point into plant ascorbate biosynthesis. [My Copy] Plant Physiol, Vol. 134, No. 3. (March 2004), pp. 1200-1205. by A. Lorence, B. I. Chevone, P. Mendes, C. L. Nessler posted by 1 person pmendes
	Integrative modelling of gene expression and cell metabolism. [My Copy] Appl Bioinformatics, Vol. 2, No. 2. (2003), pp. 79-90. by A. de la Fuente, P. Mendes posted by 1 person pmendes
	Metabolic profiling of Medicago truncatula cell cultures reveals the effects of biotic and abiotic elicitors on metabolism. [My Copy] J Exp Bot, Vol. 56, No. 410. (January 2005), pp. 323-336. by C. D. Broeckling, D. V. Huhman, M. A. Farag, et al.J. T. Smith, G. D. May, P. Mendes, R. A. Dixon, L. W. Sumner posted by 1 person pmendes
	Methyl jasmonate and yeast elicitor induce differential transcriptional and metabolic re-programming in cell suspension cultures of the model legume Medicago truncatula. [My Copy] Planta, Vol. 220, No. 5. (March 2005), pp. 696-707. by H. Suzuki, M. S. Reddy, M. Naoumkina, et al.N. Aziz, G. D. May, D. V. Huhman, L. W. Sumner, J. W. Blount, P. Mendes, R. A. Dixon posted by 1 person pmendes
	A two-dimensional electrophoresis proteomic reference map and systematic identification of 1367 proteins from a cell suspension culture of the model legume Medicago truncatula. [My Copy] Mol Cell Proteomics, Vol. 4, No. 11. (November 2005), pp. 1812-1825. by Z. Lei, A. M. Elmer, B. S. Watson, R. A. Dixon, P. J. Mendes, L. W. Sumner posted by 1 person pmendes
	Modelling and simulation for metabolomics data analysis. [My Copy] Biochem Soc Trans, Vol. 33, No. Pt 6. (December 2005), pp. 1427-1429. by P. Mendes, D. Camacho, A. de la Fuente posted by 1 person pmendes
	Metabolomics and the challenges ahead. [My Copy] Brief Bioinform, Vol. 7, No. 2. (June 2006) by P. Mendes posted by 2 people pmendes katerinakal
	Metabolic footprinting: a new approach to identify physiological changes in complex microbial communities upon exposure to toxic chemicals. [My Copy] Environ Sci Technol, Vol. 41, No. 11. (1 June 2007), pp. 3945-3951. by I. D. Henriques, D. S. Aga, P. Mendes, S. K. O'Connor, N. G. Love posted by 1 person pmendes
	A systems approach to delineate functions of paralogous transcription factors: role of the Yap family in the DNA damage response. [My Copy] Proceedings of the National Academy of Sciences of the United States of America, Vol. 105, No. 8. (26 February 2008), pp. 2934-2939. by K. Tan, H. Feizi, C. Luo, S. H. Fan, T. Ravasi, T. G. Ideker posted by 4 people HawkinsJohnC tmmurali djkt pmendes
	Full-scale model of glycolysis in Saccharomyces cerevisiae [My Copy] Biophysical Chemistry, Vol. 94, No. 1-2. (11 December 2001), pp. 121-163. by F. Hynne, S. Dano, P. G. Sorensen posted by 5 people schwartzjmc smac tlse65 westoll pmendes
	The metabolomics standards initiative. [My Copy] Nat Biotechnol, Vol. 25, No. 8. (August 2007), pp. 846-848. by , S. A. Sansone, T. Fan, et al.R. Goodacre, J. L. Griffin, N. W. Hardy, R. Kaddurah-Daouk, B. S. Kristal, J. Lindon, P. Mendes, N. Morrison, B. Nikolau, D. Robertson, L. W. Sumner, C. Taylor, M. van der Werf, B. van Ommen, O. Fiehn posted by 3 people guhjy pmendes katerinakal
	Modular cell biology: retroactivity and insulation [My Copy] Mol Syst Biol, Vol. 4 (12 February 2008) by Domitilla Del Vecchio, Alexander J. Ninfa, Eduardo D. Sontag posted by 7 people lillo80 austin margaritis rsantana pmendes roys AbnerCYH
	Gene regulation networks: a theory for their global structure and behaviors. [My Copy] Curr Top Dev Biol, Vol. 6, No. 6. (1971), pp. 145-182. by S. Kauffman posted by 1 person pmendes
	Can yeast glycolysis be understood in terms of in vitro kinetics of the constituent enzymes? Testing biochemistry. [My Copy] European journal of biochemistry / FEBS, Vol. 267, No. 17. (September 2000), pp. 5313-5329. by B. Teusink, J. Passarge, C. A. Reijenga, et al.E. Esgalhado, C. C. van der Weijden, M. Schepper, M. C. Walsh, B. M. Bakker, K. van Dam, H. V. Westerhoff, J. L. Snoep posted by 7 people dadiamah schwartzjmc peterli dullhunk pmendes marcio michaelbarton
	Metabolic Control Analysis of Glycerol Synthesis in Saccharomyces cerevisiae [My Copy] Appl. Environ. Microbiol., Vol. 68, No. 9. (1 September 2002), pp. 4448-4456. by Garth R. Cronwright, Johann M. Rohwer, Bernard A. Prior posted by 2 people athleem pmendes
	Comparison of sampling techniques for parallel analysis of transcript and metabolite levels in Saccharomyces cerevisiae. [My Copy] Yeast, Vol. 24, No. 3. (March 2007), pp. 181-188. by A. M. Martins, W. Sha, C. Evans, S. Martino-Catt, P. Mendes, V. Shulaev posted by 1 person pmendes
	The reversible Hill equation: how to incorporate cooperative enzymes into metabolic models [My Copy] Comput. Appl. Biosci., Vol. 13, No. 4. (1 August 1997), pp. 377-385. by Jan-Hendrik S. Hofmeyr, Hofmeyr Cornish-Bowden posted by 3 people JJJ athleem pmendes
	Metabolic control analysis of moiety-conserved cycles [My Copy] European Journal of Biochemistry, Vol. 155, No. 3. (1986), pp. 631-640. by Jan, Henrik Kacser, Kirsten J. Merwe posted by 2 people athleem pmendes
	LibSBML: an API library for SBML. [My Copy] Bioinformatics (Oxford, England), Vol. 24, No. 6. (15 March 2008), pp. 880-881. by Benjamin J. Bornstein, Sarah M. Keating, Akiya Jouraku, Michael Hucka posted by 11 people bertelsen silverballer47 jvb allysonlister schwartzjmc agomez guhjy dullhunk lenov maralena pmendes
	Top 10 algorithms in data mining [My Copy] Knowledge and Information Systems, Vol. 14, No. 1. (20 January 2008), pp. 1-37. by Xindong Wu, Vipin Kumar, Ross, et al.Joydeep Ghosh, Qiang Yang, Hiroshi Motoda, Geoffrey Mclachlan, Angus Ng, Bing Liu, Philip Yu, Zhi-Hua Zhou, Michael Steinbach, David Hand, Dan Steinberg posted by 18 people singhsh mzabidi pprett karipuf guhjy aviad_work rsantana yuju imrchen EmreSevinc votis haiyeong dquercia pmendes udamahan akastrin Mohan-S eddymier
	Review: on the analysis and interpretation of correlations in metabolomic data. [My Copy] Brief Bioinform, Vol. 7, No. 2. (June 2006), pp. 151-158. by R. Steuer posted by 4 people guhjy Borelli frohike pmendes
	The markup is the model: Reasoning about systems biology models in the Semantic Web era [My Copy] Journal of Theoretical Biology, Vol. 252, No. 3. (07 June 2008), pp. 538-543. by Douglas B. Kell, Pedro Mendes posted by 6 people dagmar guhjy dullhunk fisherp pmendes alanrw
	On the killing of mycobacteria by macrophages [My Copy] Cellular Microbiology, Vol. 10, No. 2. (February 2008), pp. 529-548. by Jordao, Luisa, Bleck, et al.K. E. Christopher, Mayorga, Luis, Griffiths, Gareth, Anes, Elsa posted by 1 person pmendes
	ISYS: a decentralized, component-based approach to the integration of heterogeneous bioinformatics resources. [My Copy] Bioinformatics, Vol. 17, No. 1. (January 2001), pp. 83-94. by A. Siepel, A. Farmer, A. Tolopko, et al.M. Zhuang, P. Mendes, W. Beavis, B. Sobral posted by 2 people dullhunk pmendes
	Dynamic rerouting of the carbohydrate flux is key to counteracting oxidative stress [My Copy] Journal of Biology, Vol. 6 (21 December 2007), 10. by Markus Ralser, Mirjam M. Wamelink, Axel Kowald, et al.Birgit Gerisch, Gino Heeren, Eduard A. Struys, Edda Klipp, Cornelis Jakobs, Michael Breitenbach, Hans Lehrach, Sylvia Krobitsch posted by 6 people bertelsen thegoose2 guhjy C. elegans / WormBase tharris pmendes
	Comparison of Reverse-Engineering Methods Using an in Silico Network [My Copy] Annals of the New York Academy of Sciences, Vol. 1115, No. 1. (December 2007), pp. 73-89. by Diogo Camacho, V. E. R. A. Licona, A. Paol, Pedro Mendes, Reinhard Laubenbacher posted by 3 people bertelsen guhjy pmendes
	Biochemical Pathways: An Atlas of Biochemistry and Molecular Biology [My Copy] (14 December 1998) by Gerhard Michal posted by 2 people fishtank pmendes
	Metabolic Flux Balancing: Basic Concepts, Scientific and Practical Use [My Copy] Nat Biotech, Vol. 12, No. 10. (October 1994), pp. 994-998. by Amit Varma, Bernhard O. Palsson posted by 5 people winterstream yonatanf roys Ema pmendes
	Non-linear optimization of biochemical pathways: applications to metabolic engineering and parameter estimation [My Copy] Bioinformatics (Oxford, England) In Bioinformatics, Vol. 14, No. 10. (1 November 1998), pp. 869-883. by P. Mendes, D. Kell posted by 8 people nicholasflann peterli yujiangwang dullhunk dagmar csgillespie compneur pmendes
	Enzyme Kinetics: Behavior and Analysis of Rapid Equilibrium and Steady-State Enzyme Systems (Wiley Classics Library) [My Copy] (06 July 1993) by Irwin H. Segel posted by 3 people jporternj fishtank pmendes
	Kinetic model of sucrose accumulation in maturing sugarcane culm tissue [My Copy] Phytochemistry In Dynamic Metabolic Networks, Vol. 68, No. 16-18. ( 2007), pp. 2375-2392. by Lafras Uys, Frederik C. Botha, Jan-Hendrik S. Hofmeyr, Johann M. Rohwer posted by 2 people lafras pmendes
	Approximative kinetic formats used in metabolic network modeling. [My Copy] Biotechnology and bioengineering, Vol. 91, No. 5. (5 September 2005), pp. 534-545. by Joseph J. Heijnen posted by 3 people bertelsen fishtank pmendes
	DNA sequence- and conformation-directed positioning of nucleosomes by chromatin-remodeling complexes [My Copy] Proceedings of the National Academy of Sciences (24 September 2007), 0702430104. by Karsten Rippe, Anna Schrader, Philipp Riede, Ralf Strohner, Elisabeth Lehmann, Gernot Langst posted by 3 people dchughes epigenetics pmendes
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	Multiscale stochastic simulation algorithm with stochastic partial equilibrium assumption for chemically reacting systems [My Copy] J. Comput. Phys., Vol. 206, No. 2. (2005), pp. 395-411. by Yang Cao, Dan Gillespie, Linda Petzold posted by 3 people ptupper LarryT pmendes
	The Regulation Of Cellular Systems [My Copy] (31 August 1996) by Reinhart Heinrich, Stefan Schuster posted by 2 people jrbanga pmendes
	Stochastic simulation of chemical kinetics. [My Copy] Annual review of physical chemistry, Vol. 58, No. 1. (2007), pp. 35-55. by Daniel T. Gillespie posted by 13 people gabe_rosser timflutre fierykylin devinli cannin jlidmar carmaus dIEMoSIRIS MoSi-Rostock dbikard Centre de Recherches Interdisciplinaires pmendes jjray
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	Simulation of biochemical networks using COPASI: a complex pathway simulator [My Copy] In WSC '06: Proceedings of the 37th conference on Winter simulation (2006), pp. 1698-1706. by Sven Sahle, Ralph Gauges, J&\#252;rgen Pahle, et al.Natalia Simus, Ursula Kummer, Stefan Hoops, Christine Lee, Mudita Singhal, Liang Xu, Pedro Mendes posted by 4 people carmaus dIEMoSIRIS MoSi-Rostock pmendes
	Automatic Selection of Methods for Solving Stiff and Nonstiff Systems of Ordinary Differential Equations [My Copy] SIAM Journal on Scientific and Statistical Computing, Vol. 4, No. 1. (1983), pp. 136-148. by Linda Petzold posted by 5 people jjray muraken dagmar compneur pmendes