dima's Top Recommendations

These recommendations were last updated 37 minutes ago.

	A smooth particle mesh Ewald method [My Copy] The Journal of Chemical Physics, Vol. 103, No. 19. (1995), pp. 8577-8593. by Ulrich Essmann, Lalith Perera, Max L. Berkowitz, Tom Darden, Hsing Lee, Lee G. Pedersen posted by 18 people jmparks rpetrenko Structural Biology Group TorVergata A_Coletta_Thesis r2s2 charris5 pavanghatty baker-group sobolevnrm choonpeng lillekatt and_ped10 easybakemuffin RamuAnandakrishnan ashaytan mikaellund 6rheology jteyra
	Particle mesh Ewald: An N [center-dot] log(N) method for Ewald sums in large systems [My Copy] The Journal of Chemical Physics, Vol. 98, No. 12. (1993), pp. 10089-10092. by Tom Darden, Darrin York, Lee Pedersen posted by 12 people bmduggan rpetrenko r2s2 robertvacha A_Coletta_Thesis mleis and_ped10 allmensch easybakemuffin RamuAnandakrishnan tji ashaytan
	Molecular dynamics simulations of a fully hydrated dipalmitoylphosphatidylcholine bilayer with dioeerent macroscopic boundary conditions and parameters [My Copy] (1996) by E. Tieleman, D. Berendsen posted by 1 person easybakemuffin
	Parametrization of aliphatic CH<SUB><FONT SIZE='-1'><I>n</I></FONT></SUB> united atoms of GROMOS96 force field [My Copy] Journal of Computational Chemistry, Vol. 19, No. 5. (1998), pp. 535-547. by Xavier Daura, Alan E. Mark, Wilfred F. Van Gunsteren posted by 3 people peyamin marceavi easybakemuffin
	A computer perspective of membranes: molecular dynamics studies of lipid bilayer systems [My Copy] (1997) by D. Tieleman, S. Marrink, H. Berendsen posted by 1 person easybakemuffin
	An Improved Empirical Potential Energy Function for Molecular Simulations of Phospholipids [My Copy] J. Phys. Chem. B, Vol. 104, No. 31. (10 August 2000), pp. 7510-7515. by S. E. Feller, Jr Mackerell posted by 3 people Molecular dynamics in MSU Marine easybakemuffin
	Application of the multimolecule and multiconformational RESP methodology to biopolymers: Charge derivation for DNA, RNA, and proteins [My Copy] Journal of Computational Chemistry, Vol. 16, No. 11. (1995), pp. 1357-1377. by Piotr Cieplak, Wendy D. Cornell, Christopher Bayly, Peter A. Kollman posted by 4 people Lombardo_7 easybakemuffin RamuAnandakrishnan AndreaColetta
	How lipids affect the activities of integral membrane proteins. [My Copy] Biochim Biophys Acta, Vol. 1666, No. 1-2. (3 November 2004), pp. 62-87. by A. G. Lee posted by 1 person easybakemuffin
	The Lateral Pressure Profile in Membranes: A Physical Mechanism of General Anesthesia [My Copy] Biochemistry, Vol. 36, No. 9. (4 March 1997), pp. 2339-2344. by R. S. Cantor posted by 1 person easybakemuffin
	Structure and dynamics of phospholipid bilayers using recently developed general all-atom force fields [My Copy] Journal of Computational Chemistry, Vol. 9999, No. 9999. (2007), NA. by Lula Rosso, Ian R. Gould posted by 4 people daevans sobolevnrm easybakemuffin baker-group
	Mesoscopic Undulations and Thickness Fluctuations in Lipid Bilayers from Molecular Dynamics Simulations [My Copy] Biophys. J., Vol. 79, No. 1. (1 July 2000), pp. 426-433. by Erik Lindahl, Olle Edholm posted by 3 people sobolevnrm easybakemuffin baker-group
	Molecular dynamics simulations of gramicidin A in a lipid bilayer: From structure-function relations to force fields [My Copy] Chemistry and Physics of Lipids In Protein:Lipid Interactions - COST action D22 meeting, Vol. 141, No. 1-2. (June 2006), pp. 197-204. by Turgut Bastug, Swarna M. Patra, Serdar Kuyucak posted by 2 people somoney easybakemuffin
	Free Volume Properties of Sphingomyelin, DMPC, DPPC, and PLPC Bilayers [My Copy] Journal of Computational and Theoretical Nanoscience, Vol. 2, No. 3. (September 2005), pp. 401-413. by M. Kupiainen, E. Falck, S. Ollila, et al.P. Niemela, A. A. Gurtovenko, M. T. Hyvonen, M. Patra, M. Karttunen, I. Vattulainen posted by 1 person easybakemuffin
	Comparison of simple potential functions for simulating liquid water [My Copy] The Journal of Chemical Physics, Vol. 79, No. 2. (1983), pp. 926-935. by William L. Jorgensen, Jayaraman Chandrasekhar, Jeffry D. Madura, Roger W. Impey, Michael L. Klein posted by 19 people jmparks fralium bmduggan kulinskii ibuch Lombardo_7 paddydu dfgreen softsimu mleis ttjoseph ffranca easybakemuffin ashaytan RamuAnandakrishnan r2s2 CMB pavanghatty Diego_Prada
	Development and testing of a general amber force field. [My Copy] J Comput Chem, Vol. 25, No. 9. (15 July 2004), pp. 1157-1174. by J. Wang, R. M. Wolf, J. W. Caldwell, P. A. Kollman, D. A. Case posted by 12 people rdf paddydu nigham lillekatt xdeupi gane5h kazemi megs easybakemuffin LabCompMed AndreaColetta pavanghatty
	A computer perspective of membranes: molecular dynamics studies of lipid bilayer systems. [My Copy] Biochim Biophys Acta, Vol. 1331, No. 3. (21 November 1997), pp. 235-270. by D. P. Tieleman, S. J. Marrink, H. J. Berendsen posted by 2 people davidng easybakemuffin
	Identification of domains that control the heteromeric assembly of Kir5.1/Kir4.0 potassium channels. [My Copy] American journal of physiology. Cell physiology, Vol. 284, No. 4. (April 2003) by A. A. Konstas, C. Korbmacher, S. J. Tucker posted by 1 person jenni_p
	Inwardly rectifying potassium channels [My Copy] Current Opinion in Cell Biology, Vol. 11, No. 4. (August 1999), pp. 503-508. by Frank Reimann, Frances M. Ashcroft posted by 1 person jenni_p
	INWARD RECTIFIER POTASSIUM CHANNELS [My Copy] Annual Review of Physiology, Vol. 59, No. 1. (1997), pp. 171-191. by Nichols C. G. And, A. N. Lopatin posted by 1 person subhacom
	Control of pH and PIP2 gating in heteromeric Kir4.1/Kir5.1 channels by H-Bonding at the helix-bundle crossing. [My Copy] Channels (Austin, Tex.), Vol. 1, No. 5. (t 2007), pp. 327-330. by M. Rapedius, J. J. Paynter, P. W. Fowler, et al.L. Shang, M. S. Sansom, S. J. Tucker, T. Baukrowitz posted by 1 person jenni_p
	Structural analysis of four large plasmids harboring in a unicellular cyanobacterium, Synechocystis sp. PCC 6803. [My Copy] DNA Res, Vol. 10, No. 5. (31 October 2003), pp. 221-228. by T. Kaneko, Y. Nakamura, S. Sasamoto, et al.A. Watanabe, M. Kohara, M. Matsumoto, S. Shimpo, M. Yamada, S. Tabata posted by 1 person jenni_p
	Fluorescence dye as monitor of internal pH in Escherichia coli cells [My Copy] FEBS Letters, Vol. 139, No. 1. (8 March 1982), pp. 121-124. by Emanuel Shechter, Lucienne Letellier, Elisabeth R. Simons posted by 1 person jenni_p
	Measurement of yeast intracellular pH by image processing and the change it undergoes during growth phase [My Copy] Journal of Biotechnology, Vol. 38, No. 2. (15 January 1995), pp. 165-172. by Takeo Imai, Toshihiko Ohno posted by 1 person jenni_p
	How Does the W434F Mutation Block Current in Shaker Potassium Channels? [My Copy] J. Gen. Physiol., Vol. 109, No. 6. (1 June 1997), pp. 779-789. by Youshan Yang, Yangyang Yan, Fred J. Sigworth posted by 1 person jenni_p
	Voltage-Sensing Arginines in a Potassium Channel Permeate and Occlude Cation-Selective Pores [My Copy] Neuron, Vol. 45, No. 3. (3 February 2005), pp. 379-388. by Francesco Tombola, Medha M. Pathak, Ehud Y. Isacoff posted by 2 people starz1010101 jenni_p
	Voltage-Sensing Residues in the S2 and S4 Segments of the Shaker K+ Channel [My Copy] Neuron, Vol. 16, No. 6. (June 1996), pp. 1159-1167. by Sang-Ah Seoh, Daniel Sigg, Diane M. Papazian, Francisco Bezanilla posted by 1 person jenni_p
	Contribution of the S4 Segment to Gating Charge in the Shaker K+ Channel [My Copy] Neuron, Vol. 16, No. 6. (June 1996), pp. 1169-1177. by Sanjay K. Aggarwal, Roderick Mackinnon posted by 2 people starz1010101 jenni_p
	A neutral amino acid change in segment IIS4 dramatically alters the gating properties of the voltage-dependent sodium channel. [My Copy] Proc Natl Acad Sci U S A, Vol. 87, No. 1. (January 1990), pp. 323-327. by V. J. Auld, A. L. Goldin, D. S. Krafte, et al.W. A. Catterall, H. A. Lester, N. Davidson, R. J. Dunn posted by 1 person jenni_p
	Alteration of voltage-dependence of Shaker potassium channel by mutations in the S4 sequence [My Copy] Nature, Vol. 349, No. 6307. (24 January 1991), pp. 305-310. by Diane M. Papazian, Leslie C. Timpe, Yuh N. Jan, Lily Y. Jan posted by 1 person jenni_p
	Molecular Models of Voltage Sensing [My Copy] J. Gen. Physiol., Vol. 120, No. 4. (30 September 2002), pp. 455-463. by Chris S. Gandhi, Ehud Y. Isacoff posted by 1 person jenni_p
	CLONED POTASSIUM CHANNELS FROM EUKARYOTES AND PROKARYOTES [My Copy] Annual Review of Neuroscience, Vol. 20, No. 1. (1997), pp. 91-123. by Lily Y. Jan, Yuh N. Jan posted by 1 person jenni_p
	Functional analysis of an archaebacterial voltage-dependent K+ channel [My Copy] Nature, Vol. 422, No. 6928. (13 March 2003), pp. 180-185. by Vanessa Ruta, Youxing Jiang, Alice Lee, Jiayun Chen, Roderick Mackinnon posted by 1 person jenni_p
	The aromatic binding site for tetraethylammonium ion on potassium channels [My Copy] Neuron, Vol. 8, No. 3. (March 1992), pp. 483-491. by Lise Heginbotham, Roderick Mackinnon posted by 1 person jenni_p
	Mutations affecting internal TEA blockade identify the probable pore-forming region of a K+ channel. [My Copy] Science, Vol. 251, No. 4996. (22 February 1991), pp. 939-942. by G. Yellen, M. E. Jurman, T. Abramson, R. MacKinnon posted by 1 person jenni_p
	The open pore conformation of potassium channels [My Copy] Nature, Vol. 417, No. 6888. (30 May 2002), pp. 523-526. by Youxing Jiang, Alice Lee, Jiayun Chen, Martine Cadene, Brian T. Chait, Roderick Mackinnon posted by 1 person jenni_p
	Microbial energetics. [My Copy] Philos Trans R Soc Lond B Biol Sci, Vol. 290, No. 1040. (11 August 1980), pp. 329-339. by B. A. Haddock posted by 1 person jenni_p
	The lipid bilayer concept and its experimental realization: from soap bubbles, kitchen sink, to bilayer lipid membranes [My Copy] Journal of Membrane Science, Vol. 189, No. 1. (31 July 2001), pp. 83-117. by H. Tien posted by 2 people michaelhabig jenni_p
	Functional Reconstitution of a Prokaryotic K+ Channel [My Copy] J. Gen. Physiol., Vol. 111, No. 6. (1 June 1998), pp. 741-749. by Lise Heginbotham, Ludmila Kolmakova-Partensky, Christopher Miller posted by 1 person jenni_p
	Ion channel associated proteins [My Copy] Current Opinion in Neurobiology, Vol. 6, No. 5. (October 1996), pp. 602-608. by Morgan Sheng, Eunjoon Kim posted by 1 person jenni_p
	Insight into the selectivity and gating functions of Streptomyces lividans KcsA [My Copy] Proceedings of the National Academy of Sciences, Vol. 104, No. 11. (13 March 2007), pp. 4342-4346. by Alexander Negoda, Mo Xian, Rosetta N. Reusch posted by 1 person jenni_p
	The Barium Site in a Potassium Channel by X-Ray Crystallography [My Copy] J. Gen. Physiol., Vol. 115, No. 3. (14 February 2000), pp. 269-272. by Youxing Jiang, Roderick Mackinnon posted by 1 person jenni_p
	Structural Dynamics of the Streptomyces lividans K+ Channel (SKC1): Oligomeric Stoichiometry and Stability [My Copy] Biochemistry, Vol. 36, No. 33. (19 August 1997), pp. 10343-10352. by D. M. Cortes, E. Perozo posted by 1 person jenni_p
	A prokaryotic potassium ion channel with two predicted transmembrane segments from Streptomyces lividans. [My Copy] EMBO J, Vol. 14, No. 21. (1 November 1995), pp. 5170-5178. by H. Schrempf, O. Schmidt, R. Kümmerlen, et al.S. Hinnah, D. Müller, M. Betzler, T. Steinkamp, R. Wagner posted by 1 person jenni_p
	Molecular Architecture of Full-Length KcsA: Role of Cytoplasmic Domains in Ion Permeation and Activation Gating [My Copy] J. Gen. Physiol., Vol. 117, No. 2. (29 January 2001), pp. 165-180. by Marien D. Cortes, Luis G. Cuello, Eduardo Perozo posted by 1 person jenni_p
	Genetic screening for functionality of bacterial potassium channel mutants using K+ uptake-deficient Escherichia coli. [My Copy] Methods Mol Biol, Vol. 337 (2006), pp. 157-165. by L. V. Parfenova, B. S. Rothberg posted by 1 person jenni_p
	Single mutations convert an outward K+ channel into an inward K+ channel [My Copy] Proceedings of the National Academy of Sciences, Vol. 105, No. 8. (26 February 2008), pp. 2871-2876. by Legong Li, Kun Liu, Yong Hu, Dongping Li, Sheng Luan posted by 1 person jenni_p
	KcsA: It's a Potassium Channel [My Copy] J. Gen. Physiol., Vol. 118, No. 3. (27 August 2001), pp. 303-314. by Meredith Lemasurier, Lise Heginbotham, Christopher Miller posted by 1 person jenni_p
	Multiple mechanisms, roles and controls of K+ transport in Escherichia coli. [My Copy] Biochem Soc Trans, Vol. 21, No. 4. (November 1993), pp. 1006-1010. by W. Epstein, E. Buurman, D. McLaggan, J. Naprstek posted by 1 person jenni_p
	Yeast Screen for Constitutively Active Mutant G Protein-Activated Potassium Channels [My Copy] Neuron, Vol. 29, No. 3. (March 2001), pp. 657-667. by Alexander B. Yi, Yu-Fung Lin, Yuh N. Jan, Lily Y. Jan posted by 1 person jenni_p
	Coupling G[beta][gamma]-Dependent Activation to Channel Opening via Pore Elements in Inwardly Rectifying Potassium Channels [My Copy] Neuron, Vol. 29, No. 3. (March 2001), pp. 669-680. by Rona Sadja, Karine Smadja, Noga Alagem, Eitan Reuveny posted by 1 person jenni_p
	Transmembrane Structure of an Inwardly Rectifying Potassium Channel [My Copy] Cell, Vol. 96, No. 6. (19 March 1999), pp. 879-891. by Daniel L. Minor, Susan J. Masseling, Yuh N. Jan, Lily Y. Jan posted by 1 person jenni_p
	Random mutagenesis reveals a region important for gating of the yeast K+ channel Ykc1. [My Copy] EMBO J, Vol. 16, No. 16. (15 August 1997), pp. 4817-4825. by S. H. Loukin, B. Vaillant, X. L. Zhou, E. P. Spalding, C. Kung, Y. Saimi posted by 1 person jenni_p
	One face of a transmembrane helix is crucial in mechanosensitive channel gating [My Copy] Proceedings of the National Academy of Sciences, Vol. 95, No. 19. (15 September 1998), pp. 11471-11475. by Xiaorong Ou, Paul Blount, Robert J. Hoffman, Ching Kung posted by 1 person jenni_p
	Determination of Key Structural Requirements of a K+ Channel Pore [My Copy] J. Biol. Chem., Vol. 272, No. 2. (10 January 1997), pp. 1011-1018. by Robert L. Nakamura, Julie A. Anderson, Richard F. Gaber posted by 1 person jenni_p
	Functional expression of a probable Arabidopsis thaliana potassium channel in Saccharomyces cerevisiae. [My Copy] Proc Natl Acad Sci U S A, Vol. 89, No. 9. (1 May 1992), pp. 3736-3740. by J. A. Anderson, S. S. Huprikar, L. V. Kochian, W. J. Lucas, R. F. Gaber posted by 1 person jenni_p
	Pore mutations affecting tetrameric assembly and functioning of the potassium channel KcsA from Streptomyces lividans [My Copy] FEBS Letters, Vol. 472, No. 1. (21 April 2000), pp. 83-87. by Heiner Splitt, Dirk Meuser, Ilya Borovok, Michael Betzler, Hildgund Schrempf posted by 1 person jenni_p
	Mutations in the K+ channel signature sequence. [My Copy] Biophys. J., Vol. 66, No. 4. (1 April 1994), pp. 1061-1067. by L. Heginbotham, Z. Lu, T. Abramson, R. Mackinnon posted by 1 person jenni_p
	Tetrameric Stoichiometry of a Prokaryotic K+ Channel [My Copy] Biochemistry, Vol. 36, No. 33. (19 August 1997), pp. 10335-10342. by L. Heginbotham, E. Odessey, C. Miller posted by 1 person jenni_p
	Gated Access to the Pore of a Voltage-Dependent K+ Channel [My Copy] Neuron, Vol. 19, No. 1. (July 1997), pp. 175-184. by Yi Liu, Miguel Holmgren, Mark E. Jurman, Gary Yellen posted by 1 person jenni_p
	Single Streptomyces lividans K+ Channels: Functional Asymmetries and Sidedness of Proton Activation [My Copy] J. Gen. Physiol., Vol. 114, No. 4. (27 September 1999), pp. 551-560. by Lise Heginbotham, Meredith Lemasurier, Ludmilla Kolmakova-Partensky, Christopher Miller posted by 1 person jenni_p
	Energetic optimization of ion conduction rate by the K+ selectivity filter [My Copy] Nature, Vol. 414, No. 6859. (1 November 2001), pp. 37-42. by Joao H. Morais-Cabral, Yufeng Zhou, Roderick Mackinnon posted by 1 person jenni_p
	Opening the KcsA K<sup>+</sup> Channel: Tryptophan Scanning and Complementation Analysis Lead to Mutants with Altered Gating [My Copy] Biochemistry, Vol. 41, No. 46. (19 November 2002), pp. 13653-13662. by S. N. Irizarry, E. Kutluay, G. Drews, S. J. Hart, L. Heginbotham posted by 1 person jenni_p
	Structure of the KvAP voltage-dependent K+ channel and its dependence on the lipid membrane. [My Copy] Proc Natl Acad Sci U S A, Vol. 102, No. 43. (25 October 2005), pp. 15441-15446. by S. Y. Lee, A. Lee, J. Chen, R. MacKinnon posted by 4 people jwm Radiation_Damage Stressosome jenni_p
	The structure of the potassium channel: molecular basis of K+ conduction and selectivity. [My Copy] Science, Vol. 280, No. 5360. (3 April 1998), pp. 69-77. by D. A. Doyle, J. Morais Cabral, R. A. Pfuetzner, et al.A. Kuo, J. M. Gulbis, S. L. Cohen, B. T. Chait, R. MacKinnon posted by 7 people Copper_Calcio brocktice davidcsterratt jvf lenov TulaneCEP jenni_p
	X-ray structure of a voltage-dependent K+ channel [My Copy] Nature, Vol. 423, No. 6935. (1 May 2003), pp. 33-41. by Youxing Jiang, Alice Lee, Jiayun Chen, et al.Vanessa Ruta, Martine Cadene, Brian T. Chait, Roderick Mackinnon posted by 5 people starz1010101 brocktice davidcsterratt TulaneCEP jenni_p
	Genomic plasticity of the causative agent of melioidosis, Burkholderia pseudomallei. [My Copy] Proc Natl Acad Sci U S A, Vol. 101, No. 39. (28 September 2004), pp. 14240-14245. by M. T. Holden, R. W. Titball, S. J. Peacock, et al.A. M. Cerdeño-Tárraga, T. Atkins, L. C. Crossman, T. Pitt, C. Churcher, K. Mungall, S. D. Bentley, M. Sebaihia, N. R. Thomson, N. Bason, I. R. Beacham, K. Brooks, K. A. Brown, N. F. Brown, G. L. Challis, I. Cherevach, T. Chillingworth, A. Cronin, B. Crossett, P. Davis, D. DeShazer, T. Feltwell, A. Fraser, Z. Hance, H. Hauser, S. Holroyd, K. Jagels, K. E. Keith, M. Maddison, S. Moule, C. Price, M. A. Quail, E. Rabbinowitsch, K. Rutherford, M. Sanders, M. Simmonds, S. Songsivilai, K. Stevens, S. Tumapa, M. Vesaratchavest, S. Whitehead, C. Yeats, B. G. Barrell, P. C. Oyston, J. Parkhill posted by 3 people manzanita wenhan jenni_p
	Crystal structure of the potassium channel KirBac1.1 in the closed state. [My Copy] Science, Vol. 300, No. 5627. (20 June 2003), pp. 1922-1926. by A. Kuo, J. M. Gulbis, J. F. Antcliff, et al.T. Rahman, E. D. Lowe, J. Zimmer, J. Cuthbertson, F. M. Ashcroft, T. Ezaki, D. A. Doyle posted by 5 people jwm osman Radiation_Damage Stressosome jenni_p
	The principle of gating charge movement in a voltage-dependent K+ channel. [My Copy] Nature, Vol. 423, No. 6935. (1 May 2003), pp. 42-48. by Y. Jiang, V. Ruta, J. Chen, A. Lee, R. MacKinnon posted by 6 people jwm brocktice Radiation_Damage Stressosome TulaneCEP jenni_p
	Chemistry of ion coordination and hydration revealed by a K+ channel-Fab complex at 2.0[thinsp][angst] resolution [My Copy] Nature, Vol. 414, No. 6859. (1 November 2001), pp. 43-48. by Yufeng Zhou, Joao H. Morais-Cabral, Amelia Kaufman, Roderick Mackinnon posted by 6 people nickle jwm Radiation_Damage Stressosome chgjb jenni_p
	Molecular mechanism of voltage sensor movements in a potassium channel [My Copy] The EMBO Journal, Vol. aop, No. current. (02 December 2004) by David J. S. Elliott, Edward J. Neale, Qadeer Aziz, et al.James P. Dunham, Tim S. Munsey, Malcolm Hunter, Asipu Sivaprasadarao posted by 1 person jenni_p
	Isothermal-isobaric molecular dynamics using stochastic velocity rescaling. [My Copy] The Journal of chemical physics, Vol. 130, No. 7. (21 February 2009) by Giovanni Bussi, Tatyana Zykova-Timan, Michele Parrinello posted by 1 person arnaucordomi
	Structural rearrangements of rhodopsin subunits in a dimer complex: a molecular dynamics simulation study. [My Copy] Journal of biomolecular structure & dynamics, Vol. 27, No. 2. (October 2009), pp. 127-147. by Arnau Cordomí, Juan J. Perez posted by 1 person arnaucordomi
	Effect of Force Field Parameters on Sodium and Potassium Ion Binding to Dipalmitoyl Phosphatidylcholine Bilayers [My Copy] Journal of Chemical Theory and Computation, Vol. 0, No. 0. (0000) by Arnau Cordomí, Olle Edholm, Juan J. Perez posted by 1 person arnaucordomi
	New vistas in GPCR 3D structure prediction [My Copy] Journal of Molecular Modeling by Anwar Rayan posted by 2 people xdeupi arnaucordomi
	Long-chain formoterol analogues: an investigation into the effect of increasing amino-substituent chain length on the beta2-adrenoceptor activity. [My Copy] Bioorganic & medicinal chemistry letters, Vol. 14, No. 18. (20 September 2004), pp. 4705-4710. by V. Alikhani, D. Beer, D. Bentley, et al.I. Bruce, B. M. Cuenoud, R. A. Fairhurst, P. Gedeck, S. Haberthuer, C. Hayden, D. Janus, L. Jordan, C. Lewis, K. Smithies, E. Wissler posted by 1 person arnaucordomi
	The difference between the CB(1) and CB(2) cannabinoid receptors at position 5.46 is crucial for the selectivity of WIN55212-2 for CB(2). [My Copy] Molecular pharmacology, Vol. 56, No. 4. (October 1999), pp. 834-840. by Z. H. Song, C. A. Slowey, D. P. Hurst, P. H. Reggio posted by 1 person arnaucordomi
	A critical role for a tyrosine residue in the cannabinoid receptors for ligand recognition. [My Copy] Biochemical pharmacology, Vol. 63, No. 12. (15 June 2002), pp. 2121-2136. by S. D. McAllister, Q. Tao, J. Barnett-Norris, et al.K. Buehner, D. P. Hurst, F. Guarnieri, P. H. Reggio, K. W. Nowell Harmon, G. A. Cabral, M. E. Abood posted by 1 person arnaucordomi
	An aromatic microdomain at the cannabinoid CB(1) receptor constitutes an agonist/inverse agonist binding region. [My Copy] Journal of medicinal chemistry, Vol. 46, No. 24. (20 November 2003), pp. 5139-5152. by S. D. McAllister, G. Rizvi, S. Anavi-Goffer, et al.D. P. Hurst, J. Barnett-Norris, D. L. Lynch, P. H. Reggio, M. E. Abood posted by 1 person arnaucordomi
	Molecular dynamics simulations of rhodopsin point mutants at the cytoplasmic side of helices 3 and 6. [My Copy] Journal of biomolecular structure & dynamics, Vol. 25, No. 6. (June 2008), pp. 573-587. by A. Cordomí, E. Ramon, P. Garriga, J. J. Perez posted by 1 person arnaucordomi
	Structural characterization of a zinc high-affinity binding site in rhodopsin. [My Copy] Photochemistry and photobiology, Vol. 85, No. 2. (r 2009), pp. 479-484. by D. Toledo, A. Cordomí, M. G. Proietti, et al.M. Benfatto, L. J. del Valle, J. J. Pérez, P. Garriga, F. Sepulcre posted by 1 person arnaucordomi
	G-protein-coupled receptor structures were not built in a day [My Copy] Protein Science, Vol. 18, No. 7. (20 May 2009), pp. 1335-1342. by Tracy M. Blois, James U. Bowie posted by 4 people Orengo Group Journal Picks lees arnaucordomi xdeupi
	United Atom Lipid Parameters for Combination with the Optimized Potentials for Liquid Simulations All-Atom Force Field [My Copy] Journal of Chemical Theory and Computation, Vol. 5, No. 7. (14 July 2009), pp. 1803-1813. by Jakob P. Ulmschneider, Martin B. Ulmschneider posted by 2 people arnaucordomi sobolevnrm
	Thermodynamics of flip-flop and desorption for a systematic series of phosphatidylcholine lipids [My Copy] Soft Matter (2009) by Nicolas Sapay, Drew W. F. Bennett, Peter D. Tieleman posted by 3 people arnaucordomi baker-group sobolevnrm
	Observation of Ionic Lock Formation in Molecular Dynamics Simulations of Wild Type 1 and 2 Adrenergic Receptors. [My Copy] Biochemistry (20 April 2009) by Stefano Vanni, Marilisa Neri, Ivano Tavernelli, Ursula Rothlisberger posted by 5 people arnaucordomi McCammon jmccammon agrossfield xdeupi
	Conformational toggle switches implicated in basal constitutive and agonist-induced activated states of 5-hydroxytryptamine-4 receptors. [My Copy] Molecular pharmacology, Vol. 75, No. 4. (April 2009), pp. 982-990. by L. P. Pellissier, J. Sallander, M. Campillo, et al.F. Gaven, E. Queffeulou, M. Pillot, A. Dumuis, S. Claeysen, J. Bockaert, L. Pardo posted by 2 people arnaucordomi xdeupi
	Structure-based discovery of β2-adrenergic receptor ligands [My Copy] Proceedings of the National Academy of Sciences, Vol. 106, No. 16. (21 April 2009), pp. 6843-6848. by Peter Kolb, Daniel M. Rosenbaum, John J. Irwin, Juan J. Fung, Brian K. Kobilka, Brian K. Shoichet posted by 3 people npt11tpn arnaucordomi reyez
	The role of fatty acid unsaturation in minimizing biophysical changes on the structure and local effects of bilayer membranes. [My Copy] Biochimica et biophysica acta, Vol. 1788, No. 7. (14 July 2009), pp. 1508-1516. by Sukit Leekumjorn, Hyun Ju J. Cho, Yifei Wu, Neil T. Wright, Amadeu K. Sum, Christina Chan posted by 4 people arnaucordomi baker-group sobolevnrm paulschlesinger
	Effects of alkali cations and halide anions on the DOPC lipid membrane. [My Copy] The journal of physical chemistry. A, Vol. 113, No. 26. (2 July 2009), pp. 7235-7243. by Robert Vácha, Shirley W. Siu, Michal Petrov, et al.Rainer A. Böckmann, Justyna Barucha-Kraszewska, Piotr Jurkiewicz, Martin Hof, Max L. Berkowitz, Pavel Jungwirth posted by 4 people arnaucordomi baker-group sobolevnrm paulschlesinger
	On using a too large integration time step in molecular dynamics simulations of coarse-grained molecular models. [My Copy] Physical chemistry chemical physics : PCCP, Vol. 11, No. 12. (28 March 2009), pp. 1934-1941. by M. Winger, D. Trzesniak, R. Baron, W. F. van Gunsteren posted by 6 people arnaucordomi patvarilly baker-group sobolevnrm mbeeby flbarroso
	Amyloid Aggregation on Lipid Bilayers and Its Impact on Membrane Permeability [My Copy] Journal of Molecular Biology, Vol. 387, No. 2. (27 March 2009), pp. 407-415. by Ran Friedman, Riccardo Pellarin, Amedeo Caflisch posted by 2 people arnaucordomi paulschlesinger
	The effect of cholesterol on short- and long-chain monounsaturated lipid bilayers as determined by molecular dynamics simulations and X-ray scattering. [My Copy] Biophysical journal, Vol. 95, No. 6. (15 September 2008), pp. 2792-2805. by N. Kucerka, J. D. Perlmutter, J. Pan, S. Tristram-Nagle, J. Katsaras, J. N. Sachs posted by 2 people arnaucordomi paulschlesinger
	Acyl chain conformations in phospholipid bilayers: a comparative study of docosahexaenoic acid and saturated fatty acids. [My Copy] Chemistry and physics of lipids, Vol. 153, No. 1. (May 2008), pp. 76-80. by S. E. Feller posted by 3 people arnaucordomi sobolevnrm baker-group
	Molecular simulation of multistate peptide dynamics: A comparison between microsecond timescale sampling and multiple shorter trajectories [My Copy] Journal of Computational Chemistry, Vol. 29, No. 11. (August 2008), pp. 1740-1752. by Luca Monticelli, Eric J. Sorin, D. Peter Tieleman, Vijay S. Pande, Giorgio Colombo posted by 4 people bmduggan arnaucordomi sobolevnrm baker-group
	Conformational complexity of G-protein-coupled receptors [My Copy] Trends in Pharmacological Sciences In Special Issue on Allosterism and Collateral Efficacy, Vol. 28, No. 8. (August 2007), pp. 397-406. by Brian K. Kobilka, Xavier Deupi posted by 4 people arnaucordomi guhjy superpyrin psique
	Calculation of the free energy of solvation for neutral analogs of amino acid side chains [My Copy] Journal of Computational Chemistry, Vol. 23, No. 5. (2002), pp. 548-553. by Alessandra Villa, Alan E. Mark posted by 2 people arnaucordomi ashaytan
	Hydration Thermodynamic Properties of Amino Acid Analogues: A Systematic Comparison of Biomolecular Force Fields and Water Models [My Copy] The Journal of Physical Chemistry B, Vol. 110, No. 35. (1 September 2006), pp. 17616-17626. by Berk Hess, Nico F. A. van der Vegt posted by 8 people softsimu arnaucordomi krapnik flbarroso Diego_Prada Molecular dynamics in MSU Marine ashaytan
	Nonlinear scaling schemes for Lennard-Jones interactions in free energy calculations [My Copy] The Journal of Chemical Physics, Vol. 127, No. 21. (2007), 214108. by Thomas Steinbrecher, David L. Mobley, David A. Case posted by 4 people arnaucordomi sobolevnrm baker-group dmobley
	Molecular Dynamics Simulations of Rhodopsin in Different One-Component Lipid Bilayers. [My Copy] J Phys Chem B (27 May 2007) by Arnau Cordomí, Juan J. Perez posted by 2 people arnaucordomi softsimu
	Setting up and running molecular dynamics simulations of membrane proteins. [My Copy] Methods (San Diego, Calif.), Vol. 41, No. 4. (April 2007), pp. 475-488. by Christian Kandt, Walter L. Ash, D. Peter Tieleman posted by 6 people arnaucordomi choonpeng xdeupi sobolevnrm LabCompMed baker-group
	Critical role of electrostatic interactions of amino acids at the cytoplasmic region of helices 3 and 6 in rhodopsin conformational properties and activation. [My Copy] J Biol Chem (23 February 2007) by Eva Ramon, Arnau Cordomi, Laia Bosch, et al.Evgeni Yu Y. Zernii, Ivan I I. Senin, Joan Manyosa, Pavel P P. Philippov, Juan J J. Perez, Pere Garriga posted by 2 people patricia arnaucordomi