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	Real Lives and White Lies in the Funding of Scientific Research [My Copy] PLoS Biol, Vol. 7, No. 9. (15 September 2009), e1000197. by Peter A. Lawrence posted by 55 people danilov sfalsharif Geknitics Horduna ahmetbakan tsjipko Zephyrus JLab polivares ubcg08l Convention on Knowledge Commons ePortfolio jago Laurentjp pmcarlton nuin Yanno CulCog McCammon barry rodney dmnapolitano Caronte daveGerrard sobolevnrm cyounkin jshigh maren BergmanLab cisevol MurphysLab Khavkin's lab ArtemPankin ifiokoye jclau reyez lilith ngehlenborg eisdur tnhh antonkratz samjlord Torsten_Holmer ommachi rdiaz druvus Borelli pedromts renatomilani Mycology stajich chriswillmott dullhunk Journal picks ppgardne
	How To Choose a Good Scientific Problem [My Copy] Molecular Cell, Vol. 35, No. 6. (24 September 2009), pp. 726-728. by Uri Alon, posted by 142 people afcallender Journal picks cpeters tux2000 jdoconnell smichan meriemelkaroui leliavski eudominguezmartin janderz8 sdaehne artaban421 cefa gvdh penneyft welliegirl bertelsen thegoose Brain-like research group xawen chriswillmott nellapower ishiken andreff claudiushauptmann cermak bmoores karthikraman applebyb mordiano Gorzomagnificent Horduna ajaymalik mmwoodman dbikard toszko mthomure timflutre cyounkin marsl0am jmzhuo dmorti renatomilani ibre kevinemamy Sergey_gerbek huberse ddbb12 seneca mattbiehl mmborges GeeSharpMinor jjjpppfff zhangfh andreacapocci melo_mcr aaltenburger iannis jichok josephjose TorstenWaldminghaus kshameer rudalert kvalyi UWA Science Communication duel_jetty allaves milab@yzu rabit fercosber hax123 iskanbasal livingthingdan poojamaj gonzalez amynmoore ramalldf pvdg sfalsharif dill2009 singhsh rogermug aha jarekadam Jansen04 cgravlee lkakinami anuragsethi flips robfree kaliczp yyfwuhan luciensamary elsantosneto mgaldino daveGerrard sandfire tnhh lesandrop munzmarci pdpcosta Information Integration Architecture mxro wangngu myriasofo OliverHarriman AnthonySoprano robertlischke R_C_Cordeiro daforerog operon nandipati wenhaosparty jeffcrow leocmcheung fgibson snakehsu cisevol BergmanLab michaelbarton dna dullhunk danilov m_lew abellogin cxshang grahamc SantoshKalwar Xusheng leonardo roys benoitvalley zchen75 darshan druvus Asclepius Roswell Cancer Crosstalk Zephyrus songpku aalibes flieder pedromts
	Evaluation of next generation sequencing platforms for population targeted sequencing studies. [My Copy] Genome biology, Vol. 10, No. 3. (2009), R32. by Olivier Harismendy, Pauline C. Ng, Robert L. Strausberg, et al.Xiaoyun Wang, Timothy B. Stockwell, Karen Y. Beeson, Nicholas J. Schork, Sarah S. Murray, Eric J. Topol, Samuel Levy, Kelly A. Frazer posted by 30 people humburg dutilh heliopais jfr hzoltan dbensasson GustavoLacerda adijr agbiotec jgill darian jandot n00c jonilaserson maren inesdesantiago mlog Journal picks ppgardne kiekyon michaelbarton idoerg Mycology stajich skembel giovanni druvus lwaldron djkt natstreet
	Clickstream Data Yields High-Resolution Maps of Science [My Copy] PLoS ONE In PLoS ONE, Vol. 4, No. 3. (11 March 2009), e4803. by Johan Bollen, Herbert Van de Sompel, Aric Hagberg, et al.Luis Bettencourt, Ryan Chute, Marko A. Rodriguez, Lyudmila Balakireva posted by 44 people Schopfel antonkratz daforerog mawds pansapiens CameronNeylon alhoori bcjordan cobi dullhunk mgh-lcs hst-bmi carlblesius tfuji Scis0000002 jmchauvet ARTFL markymaypo social_navigation birukou nancydiana lmichan emayorga tnhh Convention on Knowledge Commons jago klamma yzhang hughesro idoerg OriginalLurch2 atphan rcrane Gaetan nojhan kh287 silberbauer psique fgibson druvus deanmalmgren ErikiLund Mycology stajich
	ABySS: a parallel assembler for short read sequence data. [My Copy] Genome research, Vol. 19, No. 6. (1 June 2009), pp. 1117-1123. by Jared T. Simpson, Kim Wong, Shaun D. Jackman, Jacqueline E. Schein, Steven J. Jones, Inanç Birol posted by 30 people darian jfr cthachuk hzoltan ramonvidal orzenil pachorip GustavoLacerda jonilaserson operon BergmanLab polivares reyez jasontsai n00c humburg dakelley jessopher idonaldson robsyme neils natstreet AaronDarling druvus rpatward dswan Mycology stajich jbhiatt erikarner
	Evolution of genes and genomes on the Drosophila phylogeny [My Copy] Nature, Vol. 450, No. 7167. (08 November 2007), pp. 203-218. posted by 43 people aaltenburger biomcgary nuttpo daveGerrard Anachff GustavoLacerda mqbphcw3 rpetrenko gwallau chica jlncdr aprasad gjuggler lizbiogen jbsaltz druvus pradiptaray pengchy operon tmmurali indigoviolet djkt timflutre stajich zwang Garamonfok lp2 Bioinformatics EisenLab CharlesM hpaces caseybrown emptyhb urgi Mycology noor PetrovLab isimpson balicea cisevol BergmanLab Drosophila-Genetics-Genomics-2008 hdopazo
	Gene-Boosted Assembly of a Novel Bacterial Genome from Very Short Reads [My Copy] PLoS Comput Biol In PLoS Comput Biol, Vol. 4, No. 9. (26 September 2008), e1000186. by Steven L. Salzberg, Daniel D. Sommer, Daniela Puiu, Vincent T. Lee posted by 23 people skembel n00c operon BergmanLab michaelbarton azazello Thaverkamp dakelley sconlan GustavoLacerda treangen natstreet antonkratz druvus Papers recommended by the Roscoff Plankton Group vaulot iSEEM djkt microbiology_nijmegen Katje Mycology stajich semrich
	Towards a cyberinfrastructure for the biological sciences: progress, visions and challenges [My Copy] Nat Rev Genet, Vol. 9, No. 9. (September 2008), pp. 678-688. by Lincoln D. Stein posted by 33 people lmichan artaban421 tomjad n00c PaoloRomano thegoose2 fisherp emayorga nuin rdiaz bmaust guhjy carolh12 ilya alaninmcr druvus srp33 dullhunk tharris stajich Mycology mrochman dansullivanblk neils jandot GustavoLacerda jago Integrative Expertise for Global Health Convention on Knowledge Commons Poverty Alleviation from Access to Knowledge fgibson thomaskelder sjcockell
	I am not a scientist, I am a number. [My Copy] PLoS computational biology, Vol. 4, No. 12. (26 December 2008), e1000247. by Philip E. Bourne, J. Lynn Fink posted by 39 people birukou tnhh Scis0000002 deanmalmgren pablog jrw dbmi-nlp henk-cul STS Academic Writing, Literacies and Discourse kaniko rschulz lesikv phreeza najwvandijk aberamanda pick600 siebert kevinemamy reyez VGreiff guano jcaddy mmarois Yanno GustavoLacerda allysonlister dswan nuin sebastien_vigneau Roswell Cancer Crosstalk Zephyrus thomaskelder rs dbk dullhunk kshameer Mycology stajich
	BioVenn - a web application for the comparison and visualization of biological lists using area-proportional Venn diagrams [My Copy] BMC Genomics, Vol. 9, No. 1. (2008) by Tim Hulsen, Jacob de Vlieg, Wynand Alkema posted by 25 people daveGerrard n00c jfr lscarafia jmeppley hessec GustavoLacerda Mycology stajich dswan polivares egonw ptrobajo guhjy jameswasmuth lptolik msampson pengchy natstreet druvus barriot Zephyrus BergmanLab cisevol thulsen
	Why Most Published Research Findings Are False [My Copy] PLoS Med, Vol. 2, No. 8. (30 August 2005), e124. by John P. A. Ioannidis posted by 121 people MurphysLab bpcusack isp tnhh chriswillmott freesci yujiangwang acockfield pvdg benoitvalley iskanbasal NicolasLescureux ulmer jphekman davebraze Sergey_gerbek cyounkin DavidG67 Horduna LIBrain sona lord_weldaan rubenroa aaltenburger lafuente alexhakkinen NIlz polivares yyfwuhan zzb3886 amargoli CulCog jenniferwilms Bioinformatics - CRUK Stew eshirdel ckai1 monkare scmelton LSK thegoose johntdelaney virolog olberd robertlischke cobi flieder arsyed mrt2k9 schoeband raftlondon steve3001 paleorthid pawelsobko mzkbnt memming mutesa donnachie apgaylard haloin bhengeveld yangjustinc STS Method_Engineering_Services Convention on Knowledge Commons jago Tomste Anesthesia and Acute Pain richardh daforerog UCD SILS IS40340 Research Practice kristinchapman FeltonM7675 pengchy ajaymalik gbodner neteler mixedman Roswell Cancer Crosstalk Zephyrus rklancer guhjy sebpaquet garyfeng monod Borelli jmeppley chad_davis Najamuddin irinas indigoviolet mwyarbro ddahlem dullhunk madhadron balabu jiyu msierk Imat lmi_swap chenlc03 biblio24 pratap kevinemamy cjeans feipan arne suizan jasonbobe austin lonettma buggle ReadingLab EisenLab Sciences_communication_societe dIEMoSIRIS dnugent Malc elsbury shoshin achinerarias
	De novo fragment assembly with short mate-paired reads: Does the read length matter? [My Copy] Genome research, Vol. 19, No. 2. (3 February 2009), pp. 336-346. by Mark J. Chaisson, Dumitru Brinza, Pavel A. Pevzner posted by 21 people claire_jubin darian n00c carlk APRegier jandot jonilaserson natstreet dakelley jessopher orzenil AaronDarling sphsmith jasontsai nmohelli jbhiatt druvus hpaces GustavoLacerda Mycology stajich
	RGG: a general GUI Framework for R scripts. [My Copy] BMC bioinformatics, Vol. 10, No. 1. (2009), 74. by Ilhami Visne, Erkan Dilaveroglu, Klemens Vierlinger, et al.Martin Lauss, Ahmet Yildiz, Andreas Weinhaeusel, Christa Noehammer, Friedrich Leisch, Albert Kriegner posted by 27 people ltitodem operon jfr daforerog natstreet guhjy lwaldron Yanno rdiaz siebert nuin trfield pengchy acj2109 Mycology stajich jmeppley fpattyn VGreiff renatomilani BergmanLab cisevol erexhepa Bioinformatics dswan jandot druvus
	Velvet: algorithms for de novo short read assembly using de Bruijn graphs. [My Copy] Genome research In Genome Research, Vol. 18, No. 5. (18 May 2008), pp. 821-829. by Daniel R. Zerbino, Ewan Birney posted by 49 people claire_jubin danbolser humburg ajsferreira vplagnol bedo jwhitney cthachuk hzoltan azazello ajbattle jmanning2k n00c carlk pachorip APRegier jbhiatt jonilaserson operon jahwa jsatkosk sandfire thegoose2 katholt robsyme djkt hpaces AaronDarling mhz idoerg jmcq Bioinformatics dswan dakelley jasontsai DeNovoAssembly-SIMR acn druvus natstreet nmohelli stajich Mycology farhat iris42 tharris Neeperando sharpton GustavoLacerda gdb
	A Quick Guide to Teaching R Programming to Computational Biology Students [My Copy] PLoS Comput Biol, Vol. 5, No. 8. (28 August 2009), e1000482. by Stephen J. Eglen posted by 69 people idonaldson bsamal nuin kaliczp maren sobolevnrm ltitodem zchen75 artaban421 natstreet jasonn tomhebbron psique Bioinformatics - CRUK Stew eshirdel guhjy polivares ajw fishtank diamantis fastjoe23 kshameer daveGerrard hrogers JoeBanks BergmanLab cisevol srijit hwright Ayest VGreiff welliegirl asadrahman rdiaz ptrobajo heliopais coffeerv Vincent_Rouilly marekrud tnhh barry ansobol Zephyrus walshtp bertelsen fgibson pkonings Borelli klauso dlizcano dswan skembel djkt jclau lwaldron phoenixzxl timhubbard eLearning in Leicester AJCann thegoose dullhunk brianb neils silberbauer daforerog Journal picks ppgardne druvus
	Local DNA topography correlates with functional noncoding regions of the human genome. [My Copy] Science (New York, N.Y.), Vol. 324, No. 5925. (17 April 2009), pp. 389-392. by Stephen C. Parker, Loren Hansen, Hatice Ozel O. Abaan, Thomas D. Tullius, Elliott H. Margulies posted by 47 people provero rsaito BergmanLab daveGerrard operon sujaikumar antonkratz pradiptaray roys gjuggler benjaminsb gdb hagechouchin443 tomtullius scjparker psique orzenil emptyhb ilyashl coela VGreiff APRegier myzhang pkonings akundaje athma absterga rpatward timflutre Mycology stajich bpcusack jbhiatt djkt structural_bioinformatics dhlbh friendpine RockmanLab EisenLab cis-regulatory-evolution dpollard inesdesantiago JustinCrocker aprasad maximilianh idonaldson kshundyak
	A Quick Guide to Organizing Computational Biology Projects [My Copy] PLoS Comput Biol In PLoS Comput Biol, Vol. 5, No. 7. (31 July 2009), e1000424. by William S. Noble posted by 83 people agomez songpku shikin kemamy2 chvlyl freesci dfdong dutilh leliavski dgront paulymer FAB-lab rvosa installe burak annakcroft brianb nuin skembel pekrau Sergey_gerbek mordiano remoteFuture Yanno Pedro Martinez EvoDevo lab Barcelona aaltenburger marekrud guhjy dolchan frohike operon Orengo Group Journal Picks CorinYeats artaban421 antonkratz tomhebbron maren bayesian daveGerrard JoeBanks jcaddy somak bertelsen ptrobajo nperoni daforerog mmwoodman charris5 GustavoLacerda pmendes fgibson rdiaz Zephyrus heliopais franklu310 lmichan silberbauer leemond31 jlangdon robfsouza Bioinformatics - CRUK Stew pmung reyez kshameer djkt pawelsobko jjray dswan apaydin renatomilani VGreiff cabbagesofdoom ccsbs wei_tang fenghezi BergmanLab cisevol structural_bioinformatics McCammon barry sdaehne druvus
	QSRA: a quality-value guided de novo short read assembler. [My Copy] BMC bioinformatics, Vol. 10, No. 1. (2009) by Douglas W. Bryant, Weng-Keen K. Wong, Todd C. Mockler posted by 14 people michaelbarton hzoltan GustavoLacerda GeeSharpMinor Bioinformatics jfr n00c dakelley pengchy natstreet Mycology stajich idoerg druvus
	Where Do Introns Come From? [My Copy] PLoS Biology, Vol. 6, No. 11. (1 November 2008), e283. by Francesco Catania, Michael Lynch posted by 17 people azazello GustavoLacerda Mycology stajich myzhang andreasapostolides alipi R.E.A.D Zephyrus natstreet druvus dchughes clearbluespring djkt McCammon barry xianjun
	ALLPATHS: De novo assembly of whole-genome shotgun microreads [My Copy] Genome Research, Vol. 18, No. 5. (13 May 2008), pp. 810-820. by Jonathan Butler, Iain MacCallum, Michael Kleber, et al.Ilya A. Shlyakhter, Matthew K. Belmonte, Eric S. Lander, Chad Nusbaum, David B. Jaffe posted by 25 people ajsferreira n00c carlk jmanning2k APRegier pachorip jonilaserson operon thegoose2 natstreet AaronDarling mhz dakelley druvus stajich azazello hpaces Mycology tharris jwhitney iris42 Neeperando sharpton GustavoLacerda GeeSharpMinor
	Sequencing of natural strains of Arabidopsis thaliana with short reads. [My Copy] Genome research, Vol. 18, No. 12. (29 December 2008), pp. 2024-2033. by Stephan Ossowski, Korbinian Schneeberger, Richard M. Clark, Christa Lanz, Norman Warthmann, Detlef Weigel posted by 14 people seninp n00c APRegier sameersoi dandaman jasontsai Mycology stajich xwbcn natstreet druvus GustavoLacerda Notre Dame Bioinformatics semrich
	Population Genetic Inference From Resequencing Data [My Copy] Genetics In Genetics, Vol. 181, No. 1. (1 January 2009), pp. 187-197. by Rong Jiang, Simon Tavare, Paul Marjoram posted by 16 people MarkFiers n00c scmelton taylor73 maren jbsaltz RockmanLab dpollard katholt natstreet iSEEM djkt abizar druvus Mycology stajich
	Ten Simple Rules for Choosing between Industry and Academia [My Copy] PLoS Computational Biology, Vol. 5, No. 6. (26 June 2009), e1000388. by David B. Searls posted by 45 people agomez druvus tux2000 leliavski jfr welliegirl Sergey_gerbek cyounkin Tomste Horduna aaltenburger Zephyrus CulCog thegoose Yanno timflutre tnhh PeteField MarcoAlvarez sobolevnrm Bioinformatics - CRUK Stew dbikard jasontsai casutton franklu310 kieran101 chrisamiller rdiaz daveGerrard reyez neils marekrud Borelli psique kshameer gjuggler sdaehne flips Journal picks ppgardne fgibson McCammon barry dullhunk
	MetaSim—A Sequencing Simulator for Genomics and Metagenomics [My Copy] PLoS ONE, Vol. 3, No. 10. (8 October 2008), e3373. by Daniel C. Richter, Felix Ott, Alexander F. Auch, Ramona Schmid, Daniel H. Huson posted by 15 people Mycology stajich jonilaserson BergmanLab polivares michaelbarton idoerg sriesenfeld iSEEM skembel guhjy azazello hpaces druvus nuin
	Strategic reading, ontologies, and the future of scientific publishing. [My Copy] Science (New York, N.Y.) In Science, Vol. 325, No. 5942. (14 August 2009), pp. 828-832. by Allen H. Renear, Carole L. Palmer posted by 62 people danilov provero gthorisson 8_01 lilith nancylongnecker BergmanLab cisevol aaltenburger radagabriel antonkratz Semantic networks in translation guhjy Orengo Group Journal Picks robertrentzsch artaban421 malkav30 conne262 clarabermudez jclau pick600 CulCog yuifu daforerog smuekusc robertlischke nperoni drevicko eisdur Ubicomp STS Convention on Knowledge Commons Integrative Expertise for Global Health jago dayjm sebpaquet tnhh rickl Tomste fheintz reyez biologyeditors fgibson lmichan moernerlab samjlord rdiaz polivares Journal picks jandot dullhunk deanmalmgren druvus modza emptyhb plosmedicine renatomilani Zephyrus applebyb newtekken rschulz PaperCollector
	SHARCGS, a fast and highly accurate short-read assembly algorithm for de novo genomic sequencing. [My Copy] Genome research, Vol. 17, No. 11. (November 2007), pp. 1697-1706. by J. C. Dohm, C. Lottaz, T. Borodina, H. Himmelbauer posted by 19 people operon n00c robsyme dakelley DeNovoAssembly-SIMR acn druvus nmohelli natstreet timflutre stajich ghattem azazello GustavoLacerda niallhaslam Mycology flexer jwhitney iris42
	How confident can we be that orthologs are similar, but paralogs differ? [My Copy] Trends in Genetics, Vol. 25, No. 5. (13 May 2009), pp. 210-216. by Romain A. Studer, Marc Robinson-Rechavi posted by 11 people aceol idoerg dchughes natstreet druvus kshameer GustavoLacerda kiekyon gjuggler Mycology stajich
	Whole genome assembly from 454 sequencing output via modified DNA graph concept [My Copy] Computational Biology and Chemistry, Vol. 33, No. 3. (04 June 2009), pp. 224-230. by Jacek Blazewicz, Marcin Bryja, Marek Figlerowicz, et al.Piotr Gawron, Marta Kasprzak, Edward Kirton, Darren Platt, Jakub Przybytek, Aleksandra Swiercz, Lukasz Szajkowski posted by 8 people darian n00c GustavoLacerda Mycology stajich orzenil natstreet druvus
	SHRiMP: Accurate Mapping of Short Color-space Reads [My Copy] PLoS Comput Biol, Vol. 5, No. 5. (22 May 2009), e1000386. by Stephen M. Rumble, Phil Lacroute, Adrian V. Dalca, Marc Fiume, Arend Sidow, Michael Brudno posted by 28 people idonaldson heliopais jfr cthachuk hzoltan bozdagd ilanc burak guhjy djkt trfield n00c natstreet adijr druvus Bioinformatics - CRUK Stew farhat humburg kshameer operon Mycology stajich GeeSharpMinor Journal picks AlexBateman Bioinformatics barry
	Genome sequence and analysis of the Irish potato famine pathogen Phytophthora infestans [My Copy] Nature, Vol. 461, No. 7262. (09 September 2009), pp. 393-398. by Brian J. Haas, Sophien Kamoun, Michael C. Zody, et al.Rays H. Y. Jiang, Robert E. Handsaker, Liliana M. Cano, Manfred Grabherr, Chinnappa D. Kodira, Sylvain Raffaele, Trudy Torto-Alalibo, Tolga O. Bozkurt, Audrey M. V. Ah-Fong, Lucia Alvarado, Vicky L. Anderson, Miles R. Armstrong, Anna Avrova, Laura Baxter, Jim Beynon, Petra C. Boevink, Stephanie R. Bollmann, Jorunn I. B. Bos, Vincent Bulone, Guohong Cai, Cahid Cakir, James C. Carrington, Megan Chawner, Lucio Conti, Stefano Costanzo, Richard Ewan, Noah Fahlgren, Michael A. Fischbach, Johanna Fugelstad, Eleanor M. Gilroy, Sante Gnerre, Pamela J. Green, Laura J. Grenville-Briggs, John Griffith, Niklaus J. Grunwald, Karolyn Horn, Neil R. Horner, Chia-Hui Hu, Edgar Huitema, Dong-Hoon Jeong, Alexandra M. E. Jones, Jonathan D. G. Jones, Richard W. Jones, Elinor K. Karlsson, Sridhara G. Kunjeti, Kurt Lamour, Zhenyu Liu, LiJun Ma, Daniel MacLean, Marcus C. Chibucos, Hayes McDonald, Jessica McWalters, Harold J. G. Meijer, William Morgan, Paul F. Morris, Carol A. Munro, Keith OâNeill, Manuel Ospina-Giraldo, Andres Pinzon, Leighton Pritchard, Bernard Ramsahoye, Qinghu Ren, Silvia Restrepo, Sourav Roy, Ari Sadanandom, Alon Savidor, Sebastian Schornack, David C. Schwartz, Ulrike D. Schumann, Ben Schwessinger, Lauren Seyer, Ted Sharpe, Cristina Silvar, Jing Song, David J. Studholme, Sean Sykes, Marco Thines, Peter J. I. van de Vondervoort, Vipaporn Phuntumart, Stephan Wawra, Rob Weide, Joe Win, Carolyn Young, Shiguo Zhou, William Fry, Blake C. Meyers, Pieter van West, Jean Ristaino, Francine Govers, Paul R. J. Birch, Stephen C. Whisson, Howard S. Judelson, Chad Nusbaum posted by 14 people Mycology stajich kiekyon diamantis bcondon Khavkin's lab ArtemPankin Journal picks ppgardne jmanning2k dbk tomhebbron danmaclean rschulz
	De novo genome sequence assembly of a filamentous fungus using Sanger, 454 and Illumina sequence data [My Copy] Genome Biology, Vol. 10, No. 9. (2009), R94. by Scott DiGuistini, Nancy Liao, Darren Platt, et al.Gordon Robertson, Michael Seidel, Simon Chan, T. Roderick Docking, Inanc Birol, Robert Holt, Martin Hirst, Elaine Mardis, Marco Marra, Richard Hamelin, Jorg Bohlmann, Colette Breuil, Steven Jones posted by 15 people darian n00c orzenil GustavoLacerda sotacam gillianturgeon natstreet druvus jamselem sujaikumar kiekyon Journal picks ppgardne Mycology stajich
	RNA-seq: An assessment of technical reproducibility and comparison with gene expression arrays [My Copy] Genome Research, Vol. 18, No. 9. (11 September 2008), pp. 1509-1517. by John C. Marioni, Christopher E. Mason, Shrikant M. Mane, Matthew Stephens, Yoav Gilad posted by 53 people sotacam CPI UU AndersI zufar cthachuk hzoltan jwfoley heliopais debasis maren mtagaya mkiyer stubrown woodson8 jonilaserson burak Ayest ThomasDOtto SIMR bioinformatics huali n00c natstreet bandrewfox daed dandaman slevy03 pengchy felsani coela shikin fhalbrit inesdesantiago jmcq lp2 caseybrown jfr dakelley Ema balicea vega lusk semrich vmarshal fpattyn stajich Mycology giovanni ela503 Stew guhjy kengg shurjo GustavoLacerda
	Gene prediction in novel fungal genomes using an ab initio algorithm with unsupervised training. [My Copy] Genome research (29 August 2008) by Vardges Ter-Hovhannisyan, Alexandre Lomsadze, Yury O O. Chernoff, Mark Borodovsky posted by 7 people kiekyon jmartin49 GustavoLacerda orzenil Mycology stajich bcondon
	Natural history and evolutionary principles of gene duplication in fungi [My Copy] Nature, Vol. 449, No. 7158. (06 September 2007), pp. 54-61. by Ilan Wapinski, Avi Pfeffer, Nir Friedman, Aviv Regev posted by 25 people Jporci bcondon GustavoLacerda biomcgary gdb schwartzjmc keb45 gjuggler aheilbut dpollard tny dchughes djkt stajich zwang lp2 tzhughes EisenLab G4ID Genetics-of-Gambling maximilianh Mycology pkm bpcusack dandaman
	LookSeq: A browser-based viewer for deep sequencing data [My Copy] Genome Research, Vol. 19, No. 11. (29 November 2009), pp. 2125-2132. by Heinrich M. Manske, Dominic P. Kwiatkowski posted by 31 people humburg hzoltan darian dakelley tonamswish inesdesantiago Thaverkamp BergmanLab idonaldson heliopais owhitney GustavoLacerda ngehlenborg sandfire fpattyn xianjun katholt stubrown orzenil operon guhjy kongl Mycology stajich n00c torfinnnome nuin kshameer neils druvus natstreet
	Biological principles of microRNA-mediated regulation: shared themes amid diversity [My Copy] Nat Rev Genet, Vol. 9, No. 11. (November 2008), pp. 831-842. by Alex S. Flynt, Eric C. Lai posted by 18 people qfwills jfr valeriehilgers microRNA database guhjy Roswell Cancer Crosstalk Zephyrus dakelley microRNA heliopais giovenko natstreet druvus Mycology stajich ealloza dchughes pengchy
	Bluejay 1.0: genome browsing and comparison with rich customization provision and dynamic resource linking. [My Copy] BMC bioinformatics, Vol. 9, No. 1. (2008) by J. Soh, P. M. Gordon, M. L. Taschuk, et al.A. Dong, A. C. Ah-Seng, A. L. Turinsky, C. W. Sensen posted by 12 people dcolosi treangen guhjy Mycology stajich barriot Roswell Cancer Crosstalk Zephyrus joaocarrico GeeSharpMinor neils druvus
	A Catalog of Neutral and Deleterious Polymorphism in Yeast [My Copy] PLoS Genet, Vol. 4, No. 8. (2008), e1000183. by Scott W. Doniger, Hyun S. Kim, Devjanee Swain, et al.Daniella Corcuera, Morgan Williams, Shiaw-Pyng Yang, Justin C. Fay posted by 8 people GustavoLacerda madreach druvus Mycology stajich emptyhb bpcusack caseybrown
	De novo bacterial genome sequencing: Millions of very short reads assembled on a desktop computer [My Copy] Genome Research, Vol. 18, No. 5. (10 May 2008), pp. 802-809. by David Hernandez, Patrice FranÃ§ois, Laurent Farinelli, Magne Ãsterã¥s, Jacques Schrenzel posted by 20 people n00c GeeSharpMinor pachorip operon druvus dakelley DeNovoAssembly-SIMR acn nmohelli GustavoLacerda jmeppley stajich azazello microbiology_nijmegen Katje Mycology gatech-compgenomics iris42 balicea Neeperando
	Comparative genomic analyses of the human fungal pathogens Coccidioides and their relatives. [My Copy] Genome research, Vol. 19, No. 10. (28 October 2009), pp. 1722-1731. by Thomas J. Sharpton, Jason E. Stajich, Steven D. Rounsley, et al.Malcolm J. Gardner, Jennifer R. Wortman, Vinita S. Jordar, Rama Maiti, Chinnappa D. Kodira, Daniel E. Neafsey, Qiandong Zeng, Chiung-Yu Y. Hung, Cody McMahan, Anna Muszewska, Marcin Grynberg, M. Alejandra Mandel, Ellen M. Kellner, Bridget M. Barker, John N. Galgiani, Marc J. Orbach, Theo N. Kirkland, Garry T. Cole, Matthew R. Henn, Bruce W. Birren, John W. Taylor posted by 7 people bcondon GustavoLacerda druvus ramonvidal kiekyon Mycology stajich
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	The power-law distribution of gene family size is driven by the pseudogenisation rate's heterogeneity between gene families. [My Copy] Gene (10 March 2008) by Timothy Hughes, David A A. Liberles posted by 5 people GustavoLacerda operon stajich Mycology klo
	Application of massively parallel sequencing to microRNA profiling and discovery in human embryonic stem cells. [My Copy] Genome research, Vol. 18, No. 4. (19 April 2008), pp. 610-621. by Ryan D. Morin, Michael D. O'Connor, Malachi Griffith, et al.Florian Kuchenbauer, Allen Delaney, Anna-Liisa L. Prabhu, Yongjun Zhao, Helen McDonald, Thomas Zeng, Martin Hirst, Connie J. Eaves, Marco A. Marra posted by 14 people hzoltan giovenko ealloza fishtank inesdesantiago GustavoLacerda microRNA heliopais stajich Mycology maralena jfr caseybrown gdb
	High-Resolution Analysis of the 5′-End Transcriptome Using a Next Generation DNA Sequencer [My Copy] PLoS ONE, Vol. 4, No. 1. (1 January 2009), e4108. by Shin-ichi Hashimoto, Wei Qu, Budrul Ahsan, et al.Katsumi Ogoshi, Atsushi Sasaki, Yoichiro Nakatani, Yongjun Lee, Masako Ogawa, Akio Ametani, Yutaka Suzuki, Sumio Sugano, Clarence C. Lee, Robert C. Nutter, Shinichi Morishita, Kouji Matsushima posted by 10 people jwfoley tprpip guhjy poschm jfr jasontsai GustavoLacerda Cortel Mycology stajich
	MetaMine - A tool to detect and analyse gene patterns in their environmental context [My Copy] BMC Bioinformatics, Vol. 9, No. 1. (28 October 2008), 459. by Uta Bohnebeck, Thierry Lombardot, Renzo Kottmann, Frank Glockner posted by 7 people idoerg guhjy iSEEM djkt Mycology stajich druvus
	Discovery of a sexual cycle in the opportunistic fungal pathogen Aspergillus fumigatus [My Copy] Nature (30 November 2008) by Céline M. Ogorman, Hubert T. Fuller, Paul S. Dyer posted by 3 people bcondon Mycology stajich
	Comparative and functional characterization of intragenic tandem repeats in 10 Aspergillus genomes. [My Copy] Molecular biology and evolution, Vol. 26, No. 3. (1 March 2009), pp. 591-602. by John G. Gibbons, Antonis Rokas posted by 5 people Mycology stajich operon Bio_Mike druvus
	VelB/VeA/LaeA complex coordinates light signal with fungal development and secondary metabolism. [My Copy] Science (New York, N.Y.), Vol. 320, No. 5882. (13 June 2008), pp. 1504-1506. by O. Bayram, S. Krappmann, M. Ni, et al.J. W. Bok, K. Helmstaedt, O. Valerius, S. Braus-Stromeyer, N. J. Kwon, N. P. Keller, J. H. Yu, G. H. Braus posted by 3 people bcondon stajich Mycology
	EnsemblCompara GeneTrees: Complete, duplication-aware phylogenetic trees in vertebrates [My Copy] Genome Research, Vol. 19, No. 2. (24 February 2009), pp. 327-335. by Albert J. Vilella, Jessica Severin, Abel Ureta-Vidal, Li Heng, Richard Durbin, Ewan Birney posted by 10 people Keywan druvus operon Jarman Lab alpae isimpson birney Mycology stajich gjuggler
	The Nuclear Protein Sge1 of Fusarium oxysporum Is Required for Parasitic Growth [My Copy] PLoS Pathog, Vol. 5, No. 10. (23 October 2009), e1000637. by Caroline B. Michielse, Ringo van Wijk, Linda Reijnen, et al.Erik M. M. Manders, Sonja Boas, Chantal Olivain, Claude Alabouvette, Martijn Rep posted by 3 people bcondon Mycology stajich
	Ab initio construction of a eukaryotic transcriptome by massively parallel mRNA sequencing [My Copy] Proceedings of the National Academy of Sciences, Vol. 106, No. 9. (3 March 2009), pp. 3264-3269. by Moran Yassour, Tommy Kaplan, Hunter B. Fraser, et al.Joshua Z. Levin, Jenna Pfiffner, Xian Adiconis, Gary Schroth, Shujun Luo, Irina Khrebtukova, Andreas Gnirke, Chad Nusbaum, Dawn-Anne Thompson, Nir Friedman, Aviv Regev posted by 10 people hzoltan fstrozzi GustavoLacerda stubrown jfr Mycology stajich GeeSharpMinor jmcq provero
	Automated eukaryotic gene structure annotation using EVidenceModeler and the Program to Assemble Spliced Alignments [My Copy] Genome Biology, Vol. 9 (11 January 2008), R7. by Brian J. Haas, Steven L. Salzberg, Wei Zhu, et al.Mihaela Pertea, Jonathan E. Allen, Joshua Orvis, Owen R. White, Robin C. Buell, Jennifer R. Wortman posted by 5 people druvus stajich GustavoLacerda Mycology mclarenv