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	Fast Algorithm for Predicting the Secondary Structure of Single-Stranded RNA [My Copy] PNAS, Vol. 77, No. 11. (1 November 1980), pp. 6309-6313. by Ruth Nussinov, Ann B. Jacobson posted by 8 people agrobledo heliopais gzm55 idoerg arcticrasta condon Hosna beta
	Predicting RNA pseudoknot folding thermodynamics [My Copy] Nucleic Acids Research, Vol. 34, No. 9. (2006), pp. 2634-2652. by Cao, Song, Chen, Shi-Jie posted by 7 people gzm55 condon Hosna apop physics Kiarostami beta
	Dynamic programming algorithms for RNA secondary structure prediction with pseudoknots, [My Copy] Discrete Applied Mathematics, Vol. 104, No. 1-3. (15 August 2000), pp. 45-62. by Tatsuya Akutsu posted by 4 people gzm55 condon Hosna beta
	Statistical and Bayesian approaches to RNA secondary structure prediction. [My Copy] RNA (New York, N.Y.), Vol. 12, No. 3. (March 2006), pp. 323-331. by Y. Ding posted by 12 people rb_india toerst marcius arcticrasta penka condon Hosna physics Kiarostami beta BioinfoCIPF SGU-CIPF
	Pseudoknots: RNA structures with diverse functions. [My Copy] PLoS Biol, Vol. 3, No. 6. (June 2005) by D. W. Staple, S. E. Butcher posted by 9 people rb_india austin marcius arcticrasta condon Hosna beta BioinfoCIPF SGU-CIPF
	Beyond Mfold: recent advances in RNA bioinformatics. [My Copy] Journal of biotechnology, Vol. 124, No. 1. (25 June 2006), pp. 41-55. by Jens Reeder, Matthias Höchsmann, Marc Rehmsmeier, Björn Voss, Robert Giegerich posted by 25 people tonamswish heliopais daforerog danaiancu rb_india ellarond GustavoLacerda hrogers marcius eckart_bindewald tardigrade andersbj arcticrasta mtagaya condon Hosna Eonwe cthachuk stajich physics microRNA beta BioinfoCIPF SGU-CIPF reyez
	How RNA folds. [My Copy] J Mol Biol, Vol. 293, No. 2. (22 October 1999), pp. 271-281. by I. Tinoco, C. Bustamante posted by 14 people rb_india eskay dayjm marcius eckart_bindewald perrywoo arcticrasta condon Hosna apop physics beta BioinfoCIPF SGU-CIPF
	RNA folding and unfolding. [My Copy] Curr Opin Struct Biol, Vol. 14, No. 3. (June 2004), pp. 374-379. by B. Onoa, I. Tinoco posted by 11 people rb_india evaf marcius arcticrasta condon Hosna emidio_capriotti apop beta BioinfoCIPF SGU-CIPF
	The equilibrium partition function and base pair binding probabilities for RNA secondary structure. [My Copy] Biopolymers, Vol. 29, No. 6-7. (n 1990), pp. 1105-1119. by J. S. McCaskill posted by 13 people NicholasErho saunders rb_india ellarond evaf marcius arcticrasta condon Hosna Kiarostami beta BioinfoCIPF SGU-CIPF
	INFO-RNA--a fast approach to inverse RNA folding. [My Copy] Bioinformatics, Vol. 22, No. 15. (1 August 2006), pp. 1823-1831. by A. Busch, R. Backofen posted by 3 people gzm55 condon beta
	RNA Structure Prediction [My Copy] Annual Review of Biophysics and Biophysical Chemistry, Vol. 17, No. 1. (1988), pp. 167-192. by D. H. Turner, N. Sugimoto, S. M. Freier posted by 2 people Hosna gzm55
	Coaxial Stacking of Helixes Enhances Binding of Oligoribonucleotides and Improves Predictions of RNA Folding [My Copy] PNAS, Vol. 91, No. 20. (27 September 1994), pp. 9218-9222. by Ae Walter, Dh Turner, J. Kim, et al.Mh Lyttle, P. Muller, Dh Mathews, M. Zuker posted by 2 people gzm55 Hosna
	Thermodynamic Parameters for an Expanded Nearest-Neighbor Model for Formation of RNA Duplexes with Watson−Crick Base Pairs† [My Copy] Biochemistry, Vol. 37, No. 42. (1 October 1998), pp. 14719-14735. by Tianbing Xia, John Santalucia, Mark E. Burkard, et al.Ryszard Kierzek, Susan J. Schroeder, Xiaoqi Jiao, Christopher Cox, Douglas H. Turner posted by 5 people ellarond gzm55 allmensch svozil Hosna
	Predicting RNA secondary structure by free energy minimization [My Copy] Theoretical Chemistry Accounts: Theory, Computation, and Modeling (Theoretica Chimica Acta) (May 2006), pp. 1-9. by David Mathews posted by 10 people rb_india marcius condon Hosna hesam cthachuk apop beta BioinfoCIPF SGU-CIPF
	RNA folding causes secondary structure rearrangement. [My Copy] Proc Natl Acad Sci U S A, Vol. 95, No. 20. (29 September 1998), pp. 11555-11560. by M. Wu, I. Tinoco posted by 9 people rb_india austin marcius condon Hosna apop beta BioinfoCIPF SGU-CIPF
	Incorporating chemical modification constraints into a dynamic programming algorithm for prediction of RNA secondary structure. [My Copy] Proceedings of the National Academy of Sciences of the United States of America, Vol. 101, No. 19. (11 May 2004), pp. 7287-7292. by David H. Mathews, Matthew D. Disney, Jessica L. Childs, Susan J. Schroeder, Michael Zuker, Douglas H. Turner posted by 8 people haarcuba ellarond eckart_bindewald arcticrasta condon Hosna beta austin
	PseudoBase: a database with RNA pseudoknots [My Copy] Nucl. Acids Res., Vol. 28, No. 1. (1 January 2000), pp. 201-204. by F. H. D. van Batenburg, A. P. Gultyaev, C. W. A. Pleij, J. Ng, J. Oliehoek posted by 7 people marcius arcticrasta condon Hosna beta BioinfoCIPF SGU-CIPF
	The Ribonuclease P Database. [My Copy] Nucleic acids research, Vol. 27, No. 1. (1 January 1999), 314. by J. W. Brown posted by 4 people arcticrasta condon Hosna beta
	Prediction and statistics of pseudoknots in RNA structures using exactly clustered stochastic simulations. [My Copy] Proc Natl Acad Sci U S A, Vol. 100, No. 26. (23 December 2003), pp. 15310-15315. by A. Xayaphoummine, T. Bucher, F. Thalmann, H. Isambert posted by 10 people evaf austin marcius arcticrasta condon Hosna Kiarostami beta BioinfoCIPF SGU-CIPF
	An Iterated loop matching approach to the prediction of RNA secondary structures with pseudoknots [My Copy] Bioinformatics, Vol. 20, No. 1. (1 January 2004), pp. 58-66. by Jianhua Ruan, Gary D. Stormo, Weixiong Zhang posted by 6 people heliopais evaf arcticrasta condon Hosna beta
	Using an RNA secondary structure partition function to determine confidence in base pairs predicted by free energy minimization. [My Copy] RNA, Vol. 10, No. 8. (August 2004), pp. 1178-1190. by D. H. Mathews posted by 7 people evaf arcticrasta condon Hosna Kiarostami beta austin
	The FOLDALIGN web server for pairwise structural RNA alignment and mutual motif search [My Copy] Nucl. Acids Res., Vol. 33, No. suppl_2. (1 July 2005), pp. W650-653. by Jakob H. Havgaard, Rune B. Lyngso, Jan Gorodkin posted by 5 people rb_india reyez arcticrasta condon beta
	RNALOSS: a web server for RNA locally optimal secondary structures. [My Copy] Nucleic Acids Res, Vol. 33, No. Web Server issue. (1 July 2005) by P. Clote posted by 7 people rb_india marcius arcticrasta condon beta BioinfoCIPF SGU-CIPF
	Fast evaluation of internal loops in RNA secondary structure prediction [My Copy] Bioinformatics, Vol. 15, No. 6. (1 June 1999), pp. 440-445. by Rb Lyngso, M. Zuker, Cn Pedersen posted by 7 people rb_india marcius arcticrasta condon beta BioinfoCIPF SGU-CIPF
	A comprehensive comparison of comparative RNA structure prediction approaches. [My Copy] BMC bioinformatics, Vol. 5, No. 1. (30 September 2004) by Paul P. Gardner, Robert Giegerich posted by 14 people rb_india agrobledo heliopais evaf austin marcius andersbj arcticrasta penka Hosna Carnegie microRNA BioinfoCIPF SGU-CIPF
	RNA pseudoknots [My Copy] Current Opinion in Structural Biology, Vol. 2, No. 3. (June 1992), pp. 327-333. by E. Westhof, L. Jaeger posted by 1 person gzm55
	Rapid dynamic programming algorithms for RNA secondary structure [My Copy] Adv. Appl. Math., Vol. 7, No. 4. (1986), pp. 455-464. by Michael S. Waterman, Temple F. Smith posted by 1 person gzm55
	Computation of Generating Functions for Biological Molecules [My Copy] SIAM Journal on Applied Mathematics, Vol. 39, No. 1. (1980), pp. 119-133. by J. A. Howell, T. F. Smith, M. S. Waterman posted by 1 person gzm55
	Combinatorics of RNA hairpins and cloverleaves [My Copy] Studies Appl. Math, Vol. 60 (1978), pp. 91-96. by S. Waterman posted by 1 person gzm55
	RNA secondary structure: A complete mathematical analysis [My Copy] Math. Biosc, Vol. 42 (1978), pp. 257-266. by M. S. Waterman, T. F. Smith posted by 1 person gzm55
	Signal recognition particle contains a 7S RNA essential for protein translocation across the endoplasmic reticulum. [My Copy] Nature, Vol. 299, No. 5885. (21 October 1982), pp. 691-698. by P. Walter, G. Blobel posted by 1 person gzm55
	RNA structures with pseudo-knots: Graph-theoretical, combinatorial, and statistical properties [My Copy] Bulletin of Mathematical Biology, Vol. 61, No. 3. (1 May 1999), pp. 437-467. by Christian Haslinger, Peter Stadler posted by 1 person gzm55
	A combinatorial framework for RNA tertiary interaction [My Copy] (8 Dec 2007) by Jing Qin, Christian M. Reidys posted by 2 people CBPC@CFC gzm55
	Canonical RNA pseudoknot structures. [My Copy] Journal of computational biology : a journal of computational molecular cell biology, Vol. 15, No. 10. (December 2008), pp. 1257-1273. by G. Ma, C. M. Reidys posted by 2 people CBPC@CFC gzm55
	Folding 3-noncrossing RNA pseudoknot structures [My Copy] (29 Sep 2008) by Fenix W. D. Huang, Wade W. J. Peng, Christian M. Reidys posted by 2 people CBPC@CFC gzm55
	Combinatorics of RNA Structures with Pseudoknots [My Copy] Bulletin of Mathematical Biology, Vol. 70, No. 1. (1 January 2008), pp. 45-67. by Emma Jin, Jing Qin, Christian Reidys posted by 2 people CBPC@CFC gzm55
	An energy model that predicts the correct folding of both the tRNA and the 5S RNA molecules [My Copy] Nucl. Acids Res., Vol. 12, No. 1Part1. (11 January 1984), pp. 31-44. by Catherine Papanicolaou, Manolo Gouy, Jacques Ninio posted by 1 person gzm55
	RNA and the epigenetic regulation of X chromosome inactivation. [My Copy] Cell, Vol. 93, No. 3. (1 May 1998), pp. 305-308. by B. Panning, R. Jaenisch posted by 1 person gzm55
	An Efficient Implementation of Edmonds' Algorithm for Maximum Matching on Graphs [My Copy] J. ACM, Vol. 23, No. 2. (1976), pp. 221-234. by Harold N. Gabow posted by 1 person gzm55
	A comparison of thermodynamic foldings with comparatively derived structures of 16S and 16S-like rRNAs. [My Copy] RNA (New York, N.Y.), Vol. 1, No. 6. (August 1995), pp. 559-574. by D. A. Konings, R. R. Gutell posted by 1 person gzm55
	Domain structure of the ribozyme from eubacterial ribonuclease P. [My Copy] RNA (New York, N.Y.), Vol. 2, No. 6. (June 1996), pp. 551-563. by A. Loria, T. Pan posted by 1 person gzm55
	Statistics of canonical RNA pseudoknot structures [My Copy] Journal of Theoretical Biology, Vol. 253, No. 3. (07 August 2008), pp. 570-578. by F. Huang, C. Reidys posted by 2 people CBPC@CFC gzm55
	Inverse folding of RNA pseudoknot structures [My Copy] (6 May 2009) by James Z. M. Gao, Linda Y. M. Li, Christian M. Reidys posted by 2 people CBPC@CFC gzm55
	Prediction of RNA Secondary Structure [My Copy] Proceedings of the National Academy of Sciences of the United States of America, Vol. 68, No. 11. (November 1971), pp. 2682-2685. by Charles Delisi, Donald M. Crothers posted by 1 person gzm55
	Stability of ribonucleic acid double-stranded helices. [My Copy] Journal of molecular biology, Vol. 86, No. 4. (15 July 1974), pp. 843-853. by P. N. Borer, B. Dengler, I. Tinoco, O. C. Uhlenbeck posted by 1 person gzm55
	Combinatorial design of pseudoknot RNA [My Copy] Advances in Applied Mathematics, Vol. 42, No. 2. (February 2009), pp. 135-151. by E. Jin, C. Reidys posted by 2 people CBPC@CFC gzm55
	Local Connectivity of Neutral Networks [My Copy] Bulletin of Mathematical Biology by Christian Reidys posted by 2 people CBPC@CFC gzm55
	An expanding universe of noncoding RNAs. [My Copy] Science (New York, N.Y.), Vol. 296, No. 5571. (17 May 2002), pp. 1260-1263. by G. Storz posted by 3 people gzm55 reyez MuraLab
	Estimation of secondary structure in ribonucleic acids. [My Copy] Nature, Vol. 230, No. 5293. (9 April 1971), pp. 362-367. by I. Tinoco, O. C. Uhlenbeck, M. D. Levine posted by 2 people gzm55 allmensch
	Some molecular details of the secondary structure of ribonucleic acid. [My Copy] Nature, Vol. 188 (8 October 1960), pp. 98-101. by J. R. FRESCO, B. M. ALBERTS, P. DOTY posted by 2 people gzm55 elfar
	Paradigms for computational nucleic acid design [My Copy] Nucl. Acids Res., Vol. 32, No. 4. (27 February 2004), pp. 1392-1403. by Robert M. Dirks, Milo Lin, Erik Winfree, Niles A. Pierce posted by 3 people gzm55 Vincent_Rouilly stsaft
	An Abundant Class of Tiny RNAs with Probable Regulatory Roles in Caenorhabditis elegans [My Copy] Science, Vol. 294, No. 5543. (26 October 2001), pp. 858-862. by Nelson C. Lau, Lee P. Lim, Earl G. Weinstein, David P. Bartel posted by 11 people haarcuba thegoose2 gzm55 SaraNasser C. elegans / WormBase tharris tardigrade mtagaya microRNA heliopais elfar
	Identification of novel genes coding for small expressed RNAs. [My Copy] Science, Vol. 294, No. 5543. (26 October 2001), pp. 853-858. by M. Lagos-Quintana, R. Rauhut, W. Lendeckel, T. Tuschl posted by 10 people thegoose2 gzm55 daforerog SaraNasser C. elegans / WormBase tharris mtagaya microRNA heliopais elfar
	A new algorithm for RNA secondary structure design. [My Copy] J Mol Biol, Vol. 336, No. 3. (20 February 2004), pp. 607-624. by M. Andronescu, A. P. Fejes, F. Hutter, H. H. Hoos, A. Condon posted by 11 people gzm55 marcius eckart_bindewald gane5h cthachuk mgaldzic smallbadguy 18th-century_history_culture_and_society BioinfoCIPF SGU-CIPF CHIP
	The language of genes. [My Copy] Nature, Vol. 420, No. 6912. (14 November 2002), pp. 211-217. by D. B. Searls posted by 14 people daforerog gzm55 GEB gemammr garyfeng ataheri okarsligil bayesian vassilyl ReadingLab plant-development Bioinformatics soramame_0518 sconlan
	The Structural Basis of Ribosome Activity in Peptide Bond Synthesis [My Copy] Science, Vol. 289, No. 5481. (11 August 2000), pp. 920-930. by Poul Nissen, Jeffrey Hansen, Nenad Ban, Peter B. Moore, Thomas A. Steitz posted by 7 people Structural Biology Group TorVergata A_Coletta_Thesis gzm55 reyez jarasch ThomasBecker bratwurst
	Generic properties of combinatory maps: neutral networks of RNA secondary structures. [My Copy] Bull Math Biol, Vol. 59, No. 2. (March 1997), pp. 339-397. by C. Reidys, P. F. Stadler, P. Schuster posted by 4 people VGreiff gzm55 evaf alexisgallagher
	KnotSeeker: Heuristic pseudoknot detection in long RNA sequences [My Copy] RNA, Vol. 14, No. 4. (1 April 2008), pp. 630-640. by Jana Sperschneider, Amitava Datta posted by 3 people condon Hosna physics
	RNA SHAPE Chemistry Reveals Nonhierarchical Interactions Dominate Equilibrium Structural Transitions in tRNAAsp Transcripts [My Copy] Journal of the American Chemical Society, Vol. 127, No. 13. (1 April 2005), pp. 4659-4667. by Kevin A. Wilkinson, Edward J. Merino, Kevin M. Weeks posted by 3 people Hosna condon beta
	Crystal structure of a hepatitis delta virus ribozyme. [My Copy] Nature, Vol. 395, No. 6702. (8 October 1998), pp. 567-574. by A. R. Ferré-D'Amaré, K. Zhou, J. A. Doudna posted by 3 people condon Hosna beta
	Structure, stability and function of RNA pseudoknots involved in stimulating ribosomal frameshifting. [My Copy] J Mol Biol, Vol. 298, No. 2. (28 April 2000), pp. 167-185. by D. P. Giedroc, C. A. Theimer, P. L. Nixon posted by 5 people nikkiwithers condon Hosna physics beta
	Programmed ribosomal frameshifting: Much ado about knotting! [My Copy] PNAS, Vol. 96, No. 25. (7 December 1999), pp. 14177-14179. by S. L. Alam, J. F. Atkins, R. F. Gesteland posted by 3 people condon Hosna beta
	The brave new world of RNA. [My Copy] Nature, Vol. 418, No. 6894. (11 July 2002), pp. 122-124. by C. Dennis posted by 3 people condon Hosna beta
	PseudoViewer: automatic visualization of RNA pseudoknots. [My Copy] Bioinformatics, Vol. 18 Suppl 1 (2002) by K. Han, Y. Lee, W. Kim posted by 3 people condon Hosna beta
	Kissing of the two predominant hairpin loops in the coxsackie B virus 3' untranslated region is the essential structural feature of the origin of replication required for negative-strand RNA synthesis [My Copy] J. Virol., Vol. 71, No. 1. (1 January 1997), pp. 686-696. by Wj Melchers, Jg Hoenderop, Bruins, et al.Cw Pleij, Ev Pilipenko, Vi Agol, Jm Galama posted by 3 people condon Hosna beta
	PseudoBase: structural information on RNA pseudoknots. [My Copy] Nucleic Acids Res, Vol. 29, No. 1. (1 January 2001), pp. 194-195. by F. H. van Batenburg, A. P. Gultyaev, C. W. Pleij posted by 3 people condon Hosna beta
	Directed evolution of nucleic acid enzymes. [My Copy] Annu Rev Biochem, Vol. 73 (2004), pp. 791-836. by G. F. Joyce posted by 7 people rklancer marcius condon Hosna beta BioinfoCIPF SGU-CIPF
	One Sequence, Two Ribozymes: Implications for the Emergence of New Ribozyme Folds [My Copy] Science, Vol. 289, No. 5478. (21 July 2000), pp. 448-452. by Erik A. Schultes, David P. Bartel posted by 7 people marcius condon Hosna beta BioinfoCIPF SGU-CIPF austin
	Versatile and declarative dynamic programming using pair algebras. [My Copy] BMC Bioinformatics, Vol. 6, No. 1. (12 September 2005) by Peter Steffen, Robert Giegerich posted by 5 people BragilMassoud condon Hosna Kiarostami beta
	Co-transcriptional folding is encoded within RNA genes. [My Copy] BMC molecular biology, Vol. 5, No. 1. (6 August 2004) by Irmtraud M. Meyer, István Miklós posted by 9 people bpcusack evaf marcius condon Hosna raylim beta BioinfoCIPF SGU-CIPF
	The language of RNA: a formal grammar that includes pseudoknots [My Copy] Bioinformatics, Vol. 16, No. 4. (1 April 2000), pp. 334-340. by Elena Rivas, Sean R. Eddy posted by 8 people heliopais GEB gemammr evaf condon Hosna cthachuk beta
	Compilation of tRNA sequences and sequences of tRNA genes. [My Copy] Nucleic Acids Res, Vol. 26, No. 1. (1 January 1998), pp. 148-153. by M. Sprinzl, C. Horn, M. Brown, A. Ioudovitch, S. Steinberg posted by 4 people evaf condon Hosna beta
	The comparative RNA web (CRW) site: an online database of comparative sequence and structure information for ribosomal, intron, and other RNAs. [My Copy] BMC bioinformatics, Vol. 3, No. 1. (2002) by Jamie J. Cannone, Sankar Subramanian, Murray N. Schnare, et al.James R. Collett, Lisa M. D'Souza, Yushi Du, Brian Feng, Nan Lin, Lakshmi V. Madabusi, Kirsten M. Müller, Nupur Pande, Zhidi Shang, Nan Yu, Robin R. Gutell posted by 4 people Hosna evaf condon beta
	Complete probabilistic analysis of RNA shapes. [My Copy] BMC Biol, Vol. 4, No. 1. (15 February 2006) by Bjorn Voss, Robert Giegerich, Marc Rehmsmeier posted by 8 people rb_india marcius andersbj condon microRNA beta BioinfoCIPF SGU-CIPF
	Structural genomics of RNA. [My Copy] Nat Struct Biol, Vol. 7 Suppl (November 2000), pp. 954-956. by J. A. Doudna posted by 9 people marcius dchughes arcticrasta condon G4ID beta BioinfoCIPF SGU-CIPF Genetics-of-Gambling
	Non-coding RNAs: the architects of eukaryotic complexity. [My Copy] EMBO Rep, Vol. 2, No. 11. (November 2001), pp. 986-991. by J. S. Mattick posted by 3 people arcticrasta condon beta
	A bayesian statistical algorithm for RNA secondary structure prediction. [My Copy] Comput Chem, Vol. 23, No. 3-4. (15 June 1999), pp. 387-400. by Y. Ding, C. E. Lawrence posted by 7 people marcius eckart_bindewald arcticrasta condon beta BioinfoCIPF SGU-CIPF
	Secondary Structure Prediction of Interacting RNA Molecules [My Copy] Journal of Molecular Biology, Vol. 345, No. 5., pp. 987-1001. by Mirela Andronescu, Zhi C. Zhang, Anne Condon posted by 8 people rb_india marcius eckart_bindewald Hosna cthachuk physics BioinfoCIPF SGU-CIPF
	A statistical sampling algorithm for RNA secondary structure prediction [My Copy] Nucl. Acids Res., Vol. 31, No. 24. (15 December 2003), pp. 7280-7301. by Ye Ding, Charles E. Lawrence posted by 4 people puranjoy_b ellarond arcticrasta Hosna
	Complete suboptimal folding of RNA and the stability of secondary structures. [My Copy] Biopolymers, Vol. 49, No. 2. (February 1999), pp. 145-165. by S. Wuchty, W. Fontana, I. L. Hofacker, P. Schuster posted by 9 people rb_india heliopais alessandroparini marcius eckart_bindewald arcticrasta ilh BioinfoCIPF SGU-CIPF
	Identification and Classification of Conserved RNA Secondary Structures in the Human Genome [My Copy] PLoS Comput Biol, Vol. 2, No. 4. (21 April 2006), e33. by Jakob S. Pedersen, Gill Bejerano, Adam Siepel, et al.Kate Rosenbloom, Kerstin Lindblad-Toh, Eric S. Lander, Jim Kent, Webb Miller, David Haussler posted by 17 people rb_india guhjy NicholasErho marcius eckart_bindewald tardigrade arcticrasta tabu mtagaya Eonwe ilh djkt raylim tale BioinfoCIPF SGU-CIPF hpaces
	Thermodynamics of RNA-RNA Binding. [My Copy] Bioinformatics (29 January 2006) by Ulrike Mückstein, Hakim Tafer, Jörg Hackermüller, Stephan H H. Bernhart, Peter F F. Stadler, Ivo L L. Hofacker posted by 11 people rb_india marcius eckart_bindewald andersbj arcticrasta ilh mtw physics microRNA BioinfoCIPF SGU-CIPF
	Secondary structure alone is generally not statistically significant for the detection of noncoding RNAs [My Copy] Bioinformatics, Vol. 16, No. 7. (1 July 2000), pp. 583-605. by Elena Rivas, Sean R. Eddy posted by 19 people rb_india homonecloco NicholasErho thegoose2 C. elegans / WormBase tharris evaf marcius eckart_bindewald eweaver andersbj arcticrasta mtagaya dquest Eonwe ilh microRNA BioinfoCIPF SGU-CIPF
	Noncoding RNA genes. [My Copy] Curr Opin Genet Dev, Vol. 9, No. 6. (December 1999), pp. 695-699. by S. R. Eddy posted by 10 people rb_india evaf marcius arcticrasta mtagaya cmm FAB-lab BioinfoCIPF SGU-CIPF blobbybirdman
	Gideon, a program for design of structural dna nanotechnology [My Copy] (2006) by Jeffrey J. Birac posted by 2 people condon beta
	On the computational power of iterative auctions [My Copy] In EC '05: Proceedings of the 6th ACM conference on Electronic commerce (2005), pp. 29-43. by Liad Blumrosen, Noam Nisan posted by 2 people condon beta
	G-ribo: A new structural motif in ribosomal RNA [My Copy] RNA, Vol. 13, No. 4. (1 April 2007), pp. 549-554. by Sergey V. Steinberg, Yury I. Boutorine posted by 2 people condon beta
	Moments of the Boltzmann distribution for RNA secondary structures [My Copy] Bulletin of Mathematical Biology, Vol. 67, No. 5. (2005), pp. 1031-1047. by István Miklós, Irmtraud M. Meyer, Borbála Nagy posted by 3 people condon raylim beta
	Truth revelation in approximately efficient combinatorial auctions [My Copy] J. ACM, Vol. 49, No. 5. (September 2002), pp. 577-602. by Daniel Lehmann, Liadan I. O&\#263;allaghan, Yoav Shoham posted by 2 people condon beta
	First blueprint, now bricks: DNA as construction material on the nanoscale. [My Copy] Chemical Society reviews, Vol. 35, No. 11. (November 2006), pp. 1111-1121. by Sethuramasundaram Pitchiaya, Yamuna Krishnan posted by 5 people BjoernAlbrecht stsaft condon dna beta
	Pair stochastic tree adjoining grammars for aligning and predicting pseudoknot RNA structures [My Copy] Computational Systems Bioinformatics Conference, 2004. CSB 2004. Proceedings. 2004 IEEE (2004), pp. 290-299. by H. Matsui, K. Sato, Y. Sakakibara posted by 2 people condon beta
	Sequence, chemical, and structural variation of small interfering RNAs and short hairpin RNAs and the effect on mammalian gene silencing. [My Copy] Antisense Nucleic Acid Drug Dev, Vol. 13, No. 2. (April 2003), pp. 83-105. by J. Harborth, S. M. Elbashir, K. Vandenburgh, et al.H. Manninga, S. A. Scaringe, K. Weber, T. Tuschl posted by 2 people condon beta
	A set of nearest neighbor parameters for predicting the enthalpy change of RNA secondary structure formation [My Copy] Nucleic Acids Research, Vol. 34, No. 17. (October 2006), pp. 4912-4924. by Lu, Zhi John, Turner, H. Douglas, Mathews, H. David posted by 2 people condon beta
	RNA structure analysis at single nucleotide resolution by selective 2'-hydroxyl acylation and primer extension (SHAPE). [My Copy] J Am Chem Soc, Vol. 127, No. 12. (30 March 2005), pp. 4223-4231. by E. J. Merino, K. A. Wilkinson, J. L. Coughlan, K. M. Weeks posted by 3 people eckart_bindewald condon beta
	The importance of thermodynamic equilibrium for high throughput gene expression arrays. [My Copy] Biophys J, Vol. 84, No. 1. (January 2003), pp. 124-135. by G. Bhanot, Y. Louzoun, J. Zhu, C. DeLisi posted by 3 people stsaft condon beta
	Gene2Oligo: oligonucleotide design for in vitro gene synthesis. [My Copy] Nucleic Acids Res, Vol. 32, No. Web Server issue. (1 July 2004) by J. M. Rouillard, W. Lee, G. Truan, X. Gao, X. Zhou, E. Gulari posted by 3 people condon cthachuk beta
	CONTRAfold: RNA secondary structure prediction without physics-based models. [My Copy] Bioinformatics, Vol. 22, No. 14. (15 July 2006) by C. B. Do, D. A. Woods, S. Batzoglou posted by 11 people gulkur balajis marcius tardigrade penka condon beta BioinfoCIPF SGU-CIPF acarbo austin
	New insight into RNase P RNA structure from comparative analysis of the archaeal RNA. [My Copy] RNA, Vol. 7, No. 2. (February 2001), pp. 220-232. by J. K. Harris, E. S. Haas, D. Williams, D. N. Frank, J. W. Brown posted by 2 people condon beta
	Effects of Mg2+, K+, and H+ on an equilibrium between alternative conformations of an RNA pseudoknot [My Copy] Journal of Molecular Biology, Vol. 270, No. 3. (18 July 1997), pp. 451-463. by Thomas C. Gluick, Resi B. Gerstner, David E. Draper posted by 2 people condon beta
	An introduction to the mechanics of DNA. [My Copy] Philos Transact A Math Phys Eng Sci, Vol. 362, No. 1820. (15 July 2004), pp. 1265-1279. by A. A. Travers, J. M. Thompson posted by 3 people condon hirokiS beta