mariakmejia's Top Recommendations

These recommendations were last updated about 3 hours ago.

	Basic local alignment search tool. [My Copy] Journal of molecular biology, Vol. 215, No. 3. (5 October 1990), pp. 403-410. by S. F. Altschul, W. Gish, W. Miller, E. W. Myers, D. J. Lipman posted by 84 people VGreiff richter80 krapnik azazello rshe mtaschuk sjcockell niallhaslam djohnson thegoose humburg timhubbard pachorip n00c maria_hauser rpetrenko parnell yylin esyoun APRegier idoerg Neeperando robert85 thegoose2 daforerog mcbla coela alessandroparini bertelsen Blackbeard florisbuijzen laurabailey treangen pwais mmartin C. elegans / WormBase tharris dmp camster davidng evaf dragonrez jwm jmeppley Ayest RMGraze ea yas balajis alexg indigoviolet moborg arcticrasta dullhunk dgront caporaso michC myui BioNica CitoJam rabio timflutre lusk cjeans incovoma beatrizfernandez wenhan jtomasch GustavoLacerda sgoetz siebertm ichbins81 jofiel dbk-lab EisenLab T_lab biomedical-nlp Microbial-Ecology Thaverkamp shung marti ashaytan benwei granujilla
	Gene Ontology: tool for the unification of biology [My Copy] Nature Genetics, Vol. 25, No. 1. (01 May 2000), pp. 25-29. by Michael Ashburner, Catherine A. Ball, Judith A. Blake, et al.David Botstein, Heather Butler, J. Michael Cherry, Allan P. Davis, Kara Dolinski, Selina S. Dwight, Janan T. Eppig, Midori A. Harris, David P. Hill, Laurie Issel-Tarver, Andrew Kasarskis, Suzanna Lewis, John C. Matese, Joel E. Richardson, Martin Ringwald, Gerald M. Rubin, Gavin Sherlock posted by 85 people 8_01 suizan sanchezbuelna Jporci artaban421 mtaschuk niallhaslam Zephyrus nicklynch mauriceccy pmendes jperkins timhubbard ipark-kaist jeremymiller vkwn MarcoAlvarez humburg mqbphcw3 kiekyon karinlag ocs marti robert85 allysonlister daforerog chasmand lawraga jorisslob bertelsen mshossain ajbattle paszkows coela fbristow kshameer anthropomorphism nolodie dagmar Robinder verdicchio raistrick BTS-PT-AS-CS vertikalist aalibes miguel dragonrez lfriedl chad_davis yas balajis indigoviolet benny dullhunk nirfriedman fisherp caporaso helliontroy zlu gurkanbebek djkt massivemayhem incovoma leechuck aconesa sgoetz javamint bootsy PunkRock natstreet naegele kdl Bioinformatics EisenLab T_lab biomedical-nlp CitoJam pablomendes carlk marck dgront roys rvosa FAB-lab fongenae
	BLAT--the BLAST-like alignment tool. [My Copy] Genome research, Vol. 12, No. 4. (1 April 2002), pp. 656-664. by W. James Kent posted by 41 people azazello rshe dchughes rdowell LabDros gwallau druvus aprasad maria_hauser n00c sficklin Thaverkamp cpwardell BergmanLab daveGerrard coela daforerog pwais umit mmartin paszkows operon miguel pcahan1 Ayest indigoviolet mtagaya treangen michC djkt timflutre olympos cjeans wenhan natstreet antonkratz EisenLab yoanjacquemin talponer bozdagd gpappas
	Velvet: Algorithms for de novo short read assembly using de Bruijn graphs [My Copy] Genome Research, Vol. 18, No. 5. (18 May 2008), pp. 821-829. by Daniel R. Zerbino, Ewan Birney posted by 46 people ajsferreira vplagnol bedo jwhitney cthachuk hzoltan azazello ajbattle jmanning2k n00c carlk pachorip APRegier jbhiatt jonilaserson operon jahwa jsatkosk sandfire thegoose2 katholt robsyme djkt hpaces AaronDarling mhz idoerg jmcq Bioinformatics dswan dakelley jasontsai DeNovoAssembly-SIMR acn druvus natstreet nmohelli stajich Mycology farhat iris42 tharris Neeperando sharpton GustavoLacerda gdb
	Genetics of global gene expression [My Copy] Nature Reviews Genetics, Vol. 7, No. 11., pp. 862-872. by Matthew V. Rockman, Leonid Kruglyak posted by 28 people roys dpollard tardigrade balicea dchughes nickluscombe neveaire aswin qfwills ealloza giovanni mlovell grahamc lp2 emarker natstreet mimulus_99 Biostatistics Computational-Genomics Bioinformatics EisenLab Neuroscience G4ID EBI-regulation BioinfoCIPF GeschwindLab Genetics-of-Gambling guhjy
	PhyloGibbs: a Gibbs sampling motif finder that incorporates phylogeny. [My Copy] PLoS computational biology, Vol. 1, No. 7. (December 2005) by Rahul Siddharthan, Eric D. Siggia, Erik van Nimwegen posted by 21 people farhat wowalz aprasad cajunsushi treangen druvus ana postrational dquest AaronDarling nickluscombe noano adsmitty lusk lilou structural_bioinformatics Bioinformatics EBI-regulation idonaldson yevishere isimpson
	Evolution of genes and genomes on the Drosophila phylogeny [My Copy] Nature, Vol. 450, No. 7167. (08 November 2007), pp. 203-218. posted by 43 people aaltenburger biomcgary nuttpo daveGerrard Anachff GustavoLacerda mqbphcw3 rpetrenko gwallau chica jlncdr aprasad gjuggler lizbiogen jbsaltz druvus pradiptaray pengchy operon tmmurali indigoviolet djkt timflutre stajich zwang Garamonfok lp2 Bioinformatics EisenLab CharlesM hpaces caseybrown emptyhb urgi Mycology noor PetrovLab isimpson balicea cisevol BergmanLab Drosophila-Genetics-Genomics-2008 hdopazo
	Network biology: understanding the cell's functional organization. [My Copy] Nature reviews. Genetics, Vol. 5, No. 2. (February 2004), pp. 101-113. by Albert-László L. Barabási, Zoltán N. Oltvai posted by 51 people schwartzjmc daforerog fastjoe23 arsyed thepogoman mtagaya camster snuppepuppan dbk greg guhjy LeightonP hununu felciano mague kuhn textoris rhem1224 lfriedl balajis alexg wnpx jknabe adepace nickluscombe bundschu awooga jdiggans jeremymiller uprock timflutre mikaelhuss gcalda grahamc fishtank jayster4 naegele streptomyces dbk-lab kdl EisenLab TCR_Signaling EBI-regulation SysbioMPI-TCells GeschwindLab generif_paper Evangelia heliopais shikin GeneGo hryk
	Genome-wide Prediction of Mammalian Enhancers Based on Analysis of Transcription-Factor Binding Affinity [My Copy] Cell, Vol. 124, No. 1. (13 January 2006), pp. 47-59. by O. Hallikas, K. Palin, N. Sinjushina, et al.R. Rautiainen, J. Partanen, E. Ukkonen, J. Taipale posted by 22 people absterga xingxu cisstem Terkko kaarsinogen tuck brant xwbcn dchughes nickluscombe olympos cabbagezs karfunkel Bioinformatics EisenLab G4ID EBI-regulation Genetics-of-Gambling maximilianh heliopais oelemento emptyhb
	Error bars in experimental biology [My Copy] J. Cell Biol., Vol. 177, No. 1. (9 April 2007), pp. 7-11. by Geoff Cumming, Fiona Fidler, David L. Vaux posted by 62 people Jporci pjmaybank inbetweener tt srmblack abhishek_tiwari druvus bangyuzhou schoeband brianb cambray dbikard rec3141 ajaymalik Gorzomagnificent daforerog sen_cheng yangjustinc maximilianh qwermish bayesian ntakano flips inesdesantiago brian ana batallah manduca kuhn Borelli dayjm kristina chad_davis tny dullhunk rabu lechristophe nelmor jdelcampo fishtank emmahe lisa1 Daria_G devender bmaust cabbagezs natstreet winterschlaefer krokicki loopback007 structural_bioinformatics Bioinformatics VisionLab FlowCytometry Microbial-Ecology wilbur tdmckee renatomilani delenca arindrartow guhjy mjoach
	Gene set enrichment analysis: A knowledge-based approach for interpreting genome-wide expression profiles [My Copy] Proceedings of the National Academy of Sciences of the United States of America, Vol. 102, No. 43. (25 October 2005), pp. 15545-15550. by Aravind Subramanian, Pablo Tamayo, Vamsi K. Mootha, et al.Sayan Mukherjee, Benjamin L. Ebert, Michael A. Gillette, Amanda Paulovich, Scott L. Pomeroy, Todd R. Golub, Eric S. Lander, Jill P. Mesirov posted by 50 people gbloeb miskar giovenko greg dolchan pattersonee mhamidi jperkins zufar ptrobajo antonkratz yaredo tmmurali VGreiff daforerog paszkows ipark-kaist bertelsen ajbattle jessopher askrajiv idonaldson ihpark chrisamiller dragonrez jfr balajis maryee xwbcn hpiwowar aviad_work ealloza jdiggans jeremymiller frohike hawkeyehammer schuylrp natstreet Bioinformatics BioinfoCIPF GeschwindLab Indigene heliopais shikin waghsk roys ellakat srp33 sgoetz AbnerCYH
	Defrosting the Digital Library: Bibliographic Tools for the Next Generation Web [My Copy] PLoS Comput Biol, Vol. 4, No. 10. (31 October 2008), e1000204. by Duncan Hull, Steve R. Pettifer, Douglas B. Kell posted by 224 people Parenting 2.0 hughesro gbouma welliegirl Dentistry suribe mordiano operon Horduna cyrille IgorP sachingarg claudiushauptmann ianturton tech4trainers radagabriel mfenner Zotero en español jalonsoarevalo StemCellWorkstation martica840527 agbiotec LinaMelo claudine acabezas aaltenburger sarelfa Anita13 Dannycoutinho tmar lucybuykx ltitodem dcombe christianholz schoeband dgovoni maren antonkratz mzkbnt girabbit mawds tlb56 sstose klexa n00c slr52 Journal picks jandot applebyb timhubbard yangjustinc CameronNeylon heliopais sarabatts aldra Prlwrlczkwsky CPAP amyfyn vellino ulrichs malkav30 cristiangutierrez rockrescue victorantoniomtz Tita NancyAbigail Nembrod jclau clarabermudez tanyacovi6 Health_Informatics jmohan polivares artaban421 nperoni eudominguezmartin nhoussos MARCOUNAM carelcad euanlawson furlong stevepettifer flipip23 virolog ZoeThomas pawelsobko tnhh kbkbk8 rickl nellapower mcentyre wujastyk beanformer msanchof2009 Herramientas20 dmaweb bhengeveld jpgrolle wsumthai daforerog Semantic-Social-Networks INK-SSCI-SCI@CiteuLike.org INK-SSCI-SCI quianominorleo tux2000 cogs eLearning in Leicester AJCann robsyme anthrogeek lmichan sainsworth hkimura western4uk cybob10 kevinemamy akriesch williamgunn mgh-lcs carlblesius NaCTeM Effie alhoori mikel_egana tilanka coldmeadow yas Tomste mseyfang fitzgeraldp2 fungal eduardod5 DavidG67 chenlc03 stempvoort lesikv jmueller17 sirexkat Koh akraemer thegoose kharke niallhaslam rdmagnuson JuanGiarrizzo pkonings jennialp lgibson rmasur GJNauta puchu rrbarb amarois mneeley MEHTRadiology dr_lee_xray IRTADOC zilvlan curthh mount_misery narroyo rdiaz treangen hpaces bumatic BerndBerndsen Département Hypermédia - Master NET esterhasz phreeza dbk rempeljl teachingaging cs02 joseph_x_zhou continea Rosetta fletchad Betelgeuse60 tomroper 1971biblio timrwatkins rschulz JLab BergmanLab cisevol ryan smithrise silberbauer natstreet pick600 xjlibod ukppdadsr robertlischke bookwormzz NIlz junwang4 taguchi tag McCammon barry kristgy caseybrown Gaetan bcondon lynnefox marekrud nuin sdgsilvana ckai1 guhjy neils norris Poverty Alleviation from Access to Knowledge jago druvus emayorga GeeSharpMinor fgibson structural_bioinformatics chad_davis Roswell Cancer Crosstalk Zephyrus leonardo dullhunk
	Genome sequencing in microfabricated high-density picolitre reactors [My Copy] Nature, Vol. 437, No. 7057. (31 July 2005), pp. 376-380. by Marcel Margulies, Michael Egholm, William E. Altman, et al.Said Attiya, Joel S. Bader, Lisa A. Bemben, Jan Berka, Michael S. Braverman, Yi-Ju Chen, Zhoutao Chen, Scott B. Dewell, Lei Du, Joseph M. Fierro, Xavier V. Gomes, Brian C. Godwin, Wen He, Scott Helgesen, Chun H. Ho, Gerard P. Irzyk, Szilveszter C. Jando, Maria L. I. Alenquer, Thomas P. Jarvie, Kshama B. Jirage, Jong-Bum Kim, James R. Knight, Janna R. Lanza, John H. Leamon, Steven M. Lefkowitz, Ming Lei, Jing Li, Kenton L. Lohman, Hong Lu, Vinod B. Makhijani, Keith E. McDade, Michael P. McKenna, Eugene W. Myers, Elizabeth Nickerson, John R. Nobile, Ramona Plant, Bernard P. Puc, Michael T. Ronan, George T. Roth, Gary J. Sarkis, Jan F. Simons, John W. Simpson, Maithreyan Srinivasan, Karrie R. Tartaro, Alexander Tomasz, Kari A. Vogt, Greg A. Volkmer, Shally H. Wang, Yong Wang, Michael P. Weiner, Pengguang Yu, Richard F. Begley, Jonathan M. Rothberg posted by 44 people n00c rshe seb1 pachorip katiehumphry jonilaserson michaelbarton sandfire natstreet daforerog idoerg mmartin azazello jbhiatt alessandrobrozzi leechuck bjorns dayjm jmeppley arve RMGraze JAShapiro balajis cdawson AaronDarling treangen usagi-kirin beatrizfernandez wenhan xingxu erbon Microbial-Ecology GIG gatech-compgenomics tpreeprem farhat carpi bpb mcox GustavoLacerda jlgreen Green Lab iSEEM kieran101
	Robustness can evolve gradually in complex regulatory gene networks with varying topology. [My Copy] PLoS computational biology, Vol. 3, No. 2. (2 February 2007), e15. by S. Ciliberti, O. C. Martin, A. Wagner posted by 22 people chica biomcgary kaarsinogen eldan ccots indigoviolet emilyhare entropy nickluscombe aswin kengg dolhuis timflutre grahamc shigepong kynn carneiro EisenLab EBI-regulation SNE Plantandetc phoenixzxl
	RNA-seq: an assessment of technical reproducibility and comparison with gene expression arrays. [My Copy] Genome research, Vol. 18, No. 9. (11 September 2008), pp. 1509-1517. by John C. Marioni, Christopher E. Mason, Shrikant M. Mane, Matthew Stephens, Yoav Gilad posted by 49 people cthachuk hzoltan jwfoley heliopais debasis maren mtagaya mkiyer stubrown woodson8 jonilaserson burak Ayest ThomasDOtto SIMR bioinformatics huali n00c natstreet bandrewfox daed dandaman slevy03 pengchy felsani coela shikin fhalbrit inesdesantiago jmcq lp2 caseybrown jfr dakelley Ema balicea vega lusk semrich vmarshal fpattyn stajich Mycology giovanni ela503 Stew guhjy kengg shurjo GustavoLacerda
	Genome-wide analysis of mammalian promoter architecture and evolution. [My Copy] Nature genetics, Vol. 38, No. 6. (28 June 2006), pp. 626-635. by Piero Carninci, Albin Sandelin, Boris Lenhard, et al.Shintaro Katayama, Kazuro Shimokawa, Jasmina Ponjavic, Colin A. Semple, Martin S. Taylor, Pär G. Engström, Martin C. Frith, Alistair R. Forrest, Wynand B. Alkema, Sin Lam L. Tan, Charles Plessy, Rimantas Kodzius, Timothy Ravasi, Takeya Kasukawa, Shiro Fukuda, Mutsumi Kanamori-Katayama, Yayoi Kitazume, Hideya Kawaji, Chikatoshi Kai, Mari Nakamura, Hideaki Konno, Kenji Nakano, Salim Mottagui-Tabar, Peter Arner, Alessandra Chesi, Stefano Gustincich, Francesca Persichetti, Harukazu Suzuki, Sean M. Grimmond, Christine A. Wells, Valerio Orlando, Claes Wahlestedt, Edison T. Liu, Matthias Harbers, Jun Kawai, Vladimir B. Bajic, David A. Hume, Yoshihide Hayashizaki posted by 24 people rsaito guhjy antonkratz athma inesdesantiago rpatward hagechouchin443 nklee djkt jfr xwbcn dchughes tabu samal nickluscombe xiaobeizhao G4ID EBI-regulation Genetics-of-Gambling cisevol cis-regulatory-evolution eviledv gjuggler jasonflannick
	ARACNE: an algorithm for the reconstruction of gene regulatory networks in a mammalian cellular context. [My Copy] BMC Bioinformatics, Vol. 7 Suppl 1 (2006) by A. A. Margolin, I. Nemenman, K. Basso, et al.C. Wiggins, G. Stolovitzky, R. Dalla Favera, A. Califano posted by 19 people frohike dolchan tonamswish Neeperando akraemer APRegier verdicchio behindtherabbit kaarsinogen mbehbah1 druvus giovenko ptrobajo kentsis tmmurali jfr shigepong natstreet heliopais
	A comparison of common programming languages used in bioinformatics [My Copy] BMC Bioinformatics, Vol. 9, No. 1. (2008), 82. by Mathieu Fourment, Michael Gillings posted by 21 people reyez antonkratz daforerog treangen natstreet nlapalu druvus jamselem dullhunk laughcry ibuch urgi sci91078 renatomilani xili03 phoenixzxl guhjy chad_davis barry Bioinformatics structural_bioinformatics
	Bioinformatics enrichment tools: paths toward the comprehensive functional analysis of large gene lists [My Copy] Nucl. Acids Res., Vol. 37, No. 1. (1 January 2009), pp. 1-13. by Da W. Huang, Brad T. Sherman, Richard A. Lempicki posted by 47 people darian chasmand hzoltan ipark-kaist giovenko lwaldron jcaddy antonkratz Zephyrus shikin yaredo tonamswish ddunbar robfsouza Keywan daforerog ptrobajo rdiaz bertelsen Bioinformatics - CRUK Stew inesdesantiago heliopais ConklinLab AlexanderPico aviad_work ekotelnikova frohike aramesh2 jfr zufar ilyashl dolchan paszkows lptolik thomaskelder AbnerCYH neils tmmurali ealloza barriot druvus renatomilani pengchy phoenixzxl guhjy sjcockell
	Literature mining for the biologist: from information retrieval to biological discovery [My Copy] Nature Reviews Genetics, Vol. 7, No. 2. (01 February 2006), pp. 119-129. by Lars J. Jensen, Jasmin Saric, Peer Bork posted by 52 people tanyacovi6 MARCOUNAM eudominguezmartin sm-rush LEONRANGEL artaban421 rocling bertelsen virolog dipenps druvus Zephyrus fgibson psique lmichan BergmanLab cisevol ilyashl henk-cul daforerog isimpson dansullivanblk yggdrasil Enro guhjy kuhn yas dullhunk hpiwowar dgront caporaso zlu jacky957 lynnefox jdiggans cjeans ghattem michaelmampaey dejori jandot T_lab biomedical-nlp ADMiRes mircea farzanehs larsjuhljensen adoms skumagai TheresaNiederberger satre akastrin ibuch
	What is principal component analysis? [My Copy] Nature Biotechnology, Vol. 26, No. 3. (01 March 2008), pp. 303-304. by Markus Ringner posted by 73 people singhsh Jporci tnhh ruvido ucbcjbm daforerog Diego_Prada abellogin nguizard thegoose2 arsyed Zephyrus flips svozil VGreiff kaniko ssgong Yanno guhjy operon barry baaic dullhunk Bevan_Weir zeji gareth massivemayhem zwang GustavoLacerda GeeSharpMinor bmaust zambujo mingzhi starz1010101 maralena wchannels sunhwan jennifermbui kdelavega zhouyu rsantana sobolevnrm baker-group fryanpan kengg rvosa FAB-lab dekay23 adacier Bioinformatics hpaces waghsk rchauhan pavanghatty kristgy jfr bibay2004 xingxu quianominorleo craigwilson06 ashko markusd dayjm dimka i-stevenson chrissp100 tharris ale mjoach HugoMarcelo jdiezperezj rrbarb Nici
	Discovery of functional elements in 12 Drosophila genomes using evolutionary signatures. [My Copy] Nature, Vol. 450, No. 7167. (8 November 2007), pp. 219-232. by A. Stark, M. F. Lin, P. Kheradpour, et al.J. S. Pedersen, L. Parts, J. W. Carlson, M. A. Crosby, M. D. Rasmussen, S. Roy, A. N. Deoras, J. G. Ruby, J. Brennecke, , , E. Hodges, A. S. Hinrichs, A. Caspi, B. Paten, S. W. Park, M. V. Han, M. L. Maeder, B. J. Polansky, B. E. Robson, S. Aerts, J. van Helden, B. Hassan, D. G. Gilbert, D. A. Eastman, M. Rice, M. Weir, M. W. Hahn, Y. Park, C. N. Dewey, L. Pachter, W. J. Kent, D. Haussler, E. C. Lai, D. P. Bartel, G. J. Hannon, T. C. Kaufman, M. B. Eisen, A. G. Clark, D. Smith, S. E. Celniker, W. M. Gelbart, M. Kellis posted by 25 people microRNA heliopais anphony kieran101 Neeperando pradiptaray rouault druvus operon tmmurali djkt timflutre stajich lp2 cabbagezs nklee hpaces roys caseybrown gjuggler Mycology shuzhens PetrovLab cisevol Drosophila-Genetics-Genomics-2008
	Linking DNA-binding proteins to their recognition sequences by using protein microarrays. [My Copy] Proc Natl Acad Sci U S A (19 June 2006) by Su-Wen W. Ho, Ghil Jona, Christina T L T. Chen, Mark Johnston, Michael Snyder posted by 8 people emilyhare samal nickluscombe kengg koller EisenLab EBI-regulation Plantandetc
	Ultrafast and memory-efficient alignment of short DNA sequences to the human genome [My Copy] Genome Biology, Vol. 10, No. 3. (2009), R25. by Ben Langmead, Cole Trapnell, Mihai Pop, Steven Salzberg posted by 41 people jfr hzoltan cthachuk darshan fstrozzi adijr debasis bozdagd BergmanLab polivares torfinnnome n00c talponer jmcq rschulz SIMR bioinformatics ghattem operon humburg idonaldson mmartin iSEEM skembel dquest heliopais djkt GeeSharpMinor bertelsen darian Notre Dame Bioinformatics semrich dakelley idoerg vmsr hpaces admash pdexheimer mhamada fpattyn natstreet druvus
	ALLPATHS: De novo assembly of whole-genome shotgun microreads [My Copy] Genome Research, Vol. 18, No. 5. (13 May 2008), pp. 810-820. by Jonathan Butler, Iain MacCallum, Michael Kleber, et al.Ilya A. Shlyakhter, Matthew K. Belmonte, Eric S. Lander, Chad Nusbaum, David B. Jaffe posted by 25 people ajsferreira n00c carlk jmanning2k APRegier pachorip jonilaserson operon thegoose2 natstreet AaronDarling mhz dakelley druvus stajich azazello hpaces Mycology tharris jwhitney iris42 Neeperando sharpton GustavoLacerda GeeSharpMinor
	Variations in DNA elucidate molecular networks that cause disease. [My Copy] Nature, Vol. 452, No. 7186. (27 March 2008), pp. 429-435. by Yanqing Chen, Jun Zhu, Pek Yee Y. Lum, et al.Xia Yang, Shirly Pinto, Douglas J. MacNeil, Chunsheng Zhang, John Lamb, Stephen Edwards, Solveig K. Sieberts, Amy Leonardson, Lawrence W. Castellini, Susanna Wang, Marie-France F. Champy, Bin Zhang, Valur Emilsson, Sudheer Doss, Anatole Ghazalpour, Steve Horvath, Thomas A. Drake, Aldons J. Lusis, Eric E. Schadt posted by 25 people mnishimu Zephyrus biomcgary daforerog roys druvus 4th_floor_JC nicklynch semrich brianb jbsaltz djkt raiyar lp2 jo_davies shikin caseybrown GeneGo ptrobajo guhjy echinotrix natstreet sanchezbuelna jfr chrisamiller
	Finishing the euchromatic sequence of the human genome. [My Copy] Nature, Vol. 431, No. 7011. (21 October 2004), pp. 931-945. by International Human Genome Sequencing Consortium posted by 21 people rshe ThomasDOtto timhubbard daforerog ilyashl winterschlaefer mirkocortese setar Cortel aprasad dullhunk hdopazo caporaso nickluscombe joshuashen tvdbulck antonkratz biomedical-nlp EBI-regulation shikin blackm0k
	Genetics of gene expression and its effect on disease [My Copy] Nature, Vol. 452, No. 7186. (27 March 2008), pp. 423-428. by Valur Emilsson, Gudmar Thorleifsson, Bin Zhang, et al.Amy S. Leonardson, Florian Zink, Jun Zhu, Sonia Carlson, Agnar Helgason, G. Bragi Walters, Steinunn Gunnarsdottir, Magali Mouy, Valgerdur Steinthorsdottir, Gudrun H. Eiriksdottir, Gyda Bjornsdottir, Inga Reynisdottir, Daniel Gudbjartsson, Anna Helgadottir, Aslaug Jonasdottir, Adalbjorg Jonasdottir, Unnur Styrkarsdottir, Solveig Gretarsdottir, Kristinn P. Magnusson, Hreinn Stefansson, Ragnheidur Fossdal, Kristleifur Kristjansson, Hjortur G. Gislason, Tryggvi Stefansson, Bjorn G. Leifsson, Unnur Thorsteinsdottir, John R. Lamb, Jeffrey R. Gulcher, Marc L. Reitman, Augustine Kong, Eric E. Schadt, Kari Stefansson posted by 22 people Zephyrus greg daforerog athma zufar druvus 4th_floor_JC brianb djkt lp2 jo_davies shikin caseybrown GeneGo ptrobajo vplagnol smbe2008 echinotrix natstreet sanchezbuelna guhjy Borelli
	How to write consistently boring scientific literature [My Copy] Oikos, Vol. 116, No. 5. (May 2007), pp. 723-727. by Kaj Sand-Jensen posted by 216 people sdaehne fjanoos eudominguezmartin jaspervoskuilen gvdh kimbatchelor welliegirl DavidG67 nellapower jimo75 sachingarg claudiushauptmann jmzhuo Horduna toszko chriswillmott mthomure Thaverkamp ibre sfalsharif lafuente Sergey_gerbek Torsten_Holmer aaltenburger tminze mmborges Dannycoutinho soniapereira Anita13 simonhearne rudalert ulrichs UWA Science Communication duel_jetty nmsx TVB timsenior livingthingdan alhoori poojamaj letillett christianholz amynmoore pvdg leonardo Med Anthro @ UF cgravlee bhengeveld ansobol jrw proportional wendygarnica jsatkosk eumelus pdpcosta AnthonySoprano wasteland93 buchgeher lmichan NIlz sxs732 artaban421 kieranhood rabit pauljhurtado SantoshKalwar aldra zchen75 nbawia Zephyrus jgebbie lanmuzi amadeusstevenson akuhn metatheory Fneesen hkimura beete CamilleH luciensamary jcreed R_C_Cordeiro thenose cyounkin robertlischke bspackman lyss Scholarly Communication sebpaquet c_hughes klauso kaiserm tomhebbron tarokiritani nGrenier girabbit jaia CulCog alexander_bauer Gaetan cjhall mdwelsh231 sniklas polivares MurphysLab ckai1 tux2000 petko_bogdanov carelcad Tomste yangjustinc thegoose michaelbanks mrt2k9 marekrud ibuch pawelsobko klexa tunheim Elley AJCann amoreno operon McCammon barry jod999 guhjy pick600 leliavski ombamawu mjoach Publicase Thermaneutist gwallau tnhh signori birte bertelsen mmuecke Mohan-S Dori2008 konstantinos charoy flips arsyed sjefarrar rohanlowe syah jjray zzh1986 brownstudy abellogin fungal sgeuter jkglenn psique anphony ajaymalik jjrohal markusd conradlee mschmer gkoenig natstreet BergmanLab cisevol silberbauer Khavkin's lab ArtemPankin druvus allysonlister dullhunk VGreiff dbk ultrascichick ahaeusler rickl brian toomash orca Borelli cmunson lfriedl sterovetta maike echinotrix awooga yEvb0 scpeters jford pratap williamdwalker sjones pseudopharm cjeans sensesublime TaqSys soumitri GeeSharpMinor tumo rebeccamancy ascharle suizan kaniko erklaerbaer boosda kdl Neuroscience STS ColDyn feminist_technoscience OrganizationResearch Enactment Academic Writing, Literacies and Discourse hejibo randomname
	Protein networks in disease. [My Copy] Genome research, Vol. 18, No. 4. (1 April 2008), pp. 644-652. by Trey Ideker, Roded Sharan posted by 28 people shikin carlk isimpson chica saket zufar kaarsinogen giovenko guhjy balicea tmmurali Borelli jwdietrich frohike bootsy nedwards roys mclarenv phoenixzxl brianb schuylrp jfr paolomarcatili gracio thomaskelder ptrobajo raiyar zwang
	Alignment Uncertainty and Genomic Analysis [My Copy] Science, Vol. 319, No. 5862. (25 January 2008), pp. 473-476. by Karen M. Wong, Marc A. Suchard, John P. Huelsenbeck posted by 36 people Jporci operon walshtp darian ptrobajo friendpine skembel druvus treangen bpb aprasad dayjm pradiptaray dpollard tny djkt cjeans zwang lisa1 cactus biomcgary lilou EisenLab microbiology_nijmegen dandaman gjuggler renatomilani mclarenv youdon bpcusack guhjy jdelcampo adacier gracio timflutre jfr
	Comprehensive curation and analysis of global interaction networks in Saccharomyces cerevisiae [My Copy] Journal of Biology, Vol. 5, No. 4. (08 June 2006), 11. by Teresa Reguly, Ashton Breitkreutz, Lorrie Boucher, et al.Bobby J. Breitkreutz, Gary Hon, Chad Myers, Ainslie Parsons, Helena Friesen, Rose Oughtred, Amy Tong, Chris Stark, Yuen Ho, David Botstein, Brenda Andrews, Charles Boone, Olga Troyanskya, Trey Ideker, Kara Dolinski, Nizar Batada, Mike Tyers posted by 22 people carlk snuppepuppan tmmurali lfriedl balajis wnpx nickluscombe egralla citecat noano koller grahamc iris_2001 sgoetz kdl EBI-regulation shikin s041629 GeneGo pmendes mtruksa chasmand
	Probabilistic model of the human protein-protein interaction network [My Copy] Nature Biotechnology, Vol. 23, No. 8., pp. 951-959. by Daniel R. Rhodes, Scott A. Tomlins, Sooryanarayana Varambally, et al.Vasudeva Mahavisno, Terrence Barrette, Shanker Kalyana-Sundaram, Debashis Ghosh, Akhilesh Pandey, Arul M. Chinnaiyan posted by 21 people snow_dragon Borelli tonamswish ilyashl aelef cswinburne kentsis lfriedl balajis opheliav wnpx nickluscombe eukfn iris_2001 antonkratz kdl EBI-regulation mingzhi maralena phoenixzxl penpen926
	Systematic interpretation of genetic interactions using protein networks [My Copy] Nat Biotech, Vol. 23, No. 5. (05 May 2005), pp. 561-566. by Ryan Kelley, Trey Ideker posted by 24 people colmryan nzm dakelley chasmand ajbattle mtaschuk benjaminsb lptolik nedwards okarsligil tuck balajis wnpx nirfriedman nickluscombe mmt koller massivemayhem patrycjam patrycja_missiuro Bioinformatics EBI-regulation mingzhi carlk
	Assessing computational tools for the discovery of transcription factor binding sites [My Copy] Nat Biotech, Vol. 23, No. 1. (06 January 2005), pp. 137-144. by Martin Tompa, Nan Li, Timothy L. Bailey, et al.George M. Church, Bart De Moor, Eleazar Eskin, Alexander V. Favorov, Martin C. Frith, Yutao Fu, W. James Kent, Vsevolod J. Makeev, Andrei A. Mironov, William S. Noble, Giulio Pavesi, Graziano Pesole, Mireille Regnier, Nicolas Simonis, Saurabh Sinha, Gert Thijs, Jacques van Helden, Mathias Vandenbogaert, Zhiping Weng, Christopher Workman, Chun Ye, Zhou Zhu posted by 45 people mpizbioinfo megraw Dulce farhat wowalz mhofree jasontsai heliopais pengchy daforerog yylin cambray emptyhb bryankr icases ana barry aalibes aprasad jfr tuck chad_davis lyongu tabu dquest neveaire ranb johncumbers noano xiaobeizhao olympos GustavoLacerda nklee mdimon structural_bioinformatics Biostatistics Computational-Genomics Bioinformatics Neuroscience TNT dandaman vietanh0 ep161302 nuin Stew
	Structural variation in the human genome [My Copy] Nature Reviews Genetics, Vol. 7, No. 2. (01 February 2006), pp. 85-97. by Lars Feuk, Andrew R. Carson, Stephen W. Scherer posted by 37 people ajbattle bertelsen baizhang APRegier Neeperando xingxu daforerog psique Zephyrus GEB dlobo jandot cgreal balajis bala balicea dchughes tabu darcyduke adepace AaronDarling rdiaz massivemayhem cat_worth jmrivort ccr Lip CGREL structural_bioinformatics Bioinformatics EisenLab SFX-Verde-team-MITLibraries G4ID G-quadruplex Supramolecular DictyosteliumGroup Genetics-of-Gambling
	Practical Strategies for Discovering Regulatory DNA Sequence Motifs [My Copy] PLoS Comput Biol, Vol. 2, No. 4. (28 April 2006), e36. by Kenzie D. MacIsaac, Ernest Fraenkel posted by 20 people Jporci leemond31 Dulce maximilianh heliopais daforerog natstreet druvus giovenko nuin bryankr ana chad_davis balicea hggr GustavoLacerda structural_bioinformatics Bioinformatics svdate kristallreiner
	Genome-wide transcription and the implications for genomic organization [My Copy] Nature Reviews Genetics, Vol. 8, No. 6. (08 May 2007), pp. 413-423. by Philipp Kapranov, Aarron T. Willingham, Thomas R. Gingeras posted by 29 people Jporci bartjacobse bertelsen daforerog coela hagechouchin443 emptyhb pengchy guhjy balicea xico dchughes kengg sebastien_vigneau zwang ajgentles Ema asddd hanansh antonkratz Bioinformatics WetBiology G4ID Plantandetc Genetics-of-Gambling vietanh0 maximilianh GeeSharpMinor inesdesantiago
	Genomic analysis of human microRNA transcripts [My Copy] Proceedings of the National Academy of Sciences, Vol. 104, No. 45. (6 November 2007), pp. 17719-17724. by Harpreet K. Saini, Sam Griffiths-Jones, Anton J. Enright posted by 20 people danaiancu tonamswish daforerog druvus microRNA heliopais jfr guhjy tmmurali dchughes AbnerCYH ealloza bootsy lp2 cabbagezs maximilianh RedmondSmyth gracio maralena tolot27
	Expression profiling in primates reveals a rapid evolution of human transcription factors. [My Copy] Nature, Vol. 440, No. 7081. (9 March 2006), pp. 242-245. by Yoav Gilad, Alicia Oshlack, Gordon K. Smyth, Terence P. Speed, Kevin P. White posted by 22 people gderwin athma stevanspringer ccots eckart_bindewald dchughes tabu nirfriedman nickluscombe ranb johncumbers djkt nicg mikaelhuss JeffR100 candypmcg emarker FAB-lab G4ID EBI-regulation Genetics-of-Gambling emptyhb
	Eukaryotic transcription factor binding sites--modeling and integrative search methods. [My Copy] Bioinformatics (Oxford, England), Vol. 24, No. 11. (1 June 2008), pp. 1325-1331. by Sridhar Hannenhalli posted by 15 people fenghezi isimpson wowalz cassj druvus nklee oannes hplatero maximilianh heliopais bootsy Ema sameetmehta guhjy chad_davis
	Integrated analysis of regulatory and metabolic networks reveals novel regulatory mechanisms in Saccharomyces cerevisiae. [My Copy] Genome Res, Vol. 16, No. 5. (May 2006), pp. 627-635. by M. J. Herrgård, B. S. Lee, V. Portnoy, B. Ø. Palsson posted by 12 people michaelbarton JeremyZucker nickluscombe aswin kengg koller raiyar cjeans edwardmorrissey EBI-regulation steinmetzlab Plantandetc
	Ten Simple Rules for Getting Published [My Copy] PLoS Comput Biol, Vol. 1, No. 5. (28 October 2005), e57. by Philip E. Bourne posted by 42 people Sergey_gerbek aaltenburger mattbiehl reconnie daforerog lesikv msampson monkare robertlischke schlady abellogin kimbellanderson misonneh Roswell Cancer Crosstalk Zephyrus marcius eckart_bindewald eweaver leonardo dullhunk cmm ewmoore nickluscombe paulclinger ucbcjbm danilov rgb linhailue kevinemamy rodney FAB-lab EBI-regulation SigsitLab BioinfoCIPF SGU-CIPF pileWorks Kopelman_Group Torsten_Holmer elvinado mattions kristina VisionLab
	Global landscape of protein complexes in the yeast Saccharomyces cerevisiae [My Copy] Nature, Vol. 440, No. 7084. (22 March 2006), pp. 637-643. by Nevan J. Krogan, Gerard Cagney, Haiyuan Yu, et al.Gouqing Zhong, Xinghua Guo, Alexandr Ignatchenko, Joyce Li, Shuye Pu, Nira Datta, Aaron P. Tikuisis, Thanuja Punna, JosÃ© M. PeregrÃn-Alvarez, Michael Shales, Xin Zhang, Michael Davey, Mark D. Robinson, Alberto Paccanaro, James E. Bray, Anthony Sheung, Bryan Beattie, Dawn P. Richards, Veronica Canadien, Atanas Lalev, Frank Mena, Peter Wong, Andrei Starostine, Myra M. Canete, James Vlasblom, Samuel Wu, Chris Orsi, Sean R. Collins, Shamanta Chandran, Robin Haw, Jennifer J. Rilstone, Kiran Gandi, Natalie J. Thompson, Gabe Musso, Peter St Onge, Shaun Ghanny, Mandy H. Y. Lam, Gareth Butland, Amin M. Altaf-Ul, Shigehiko Kanaya, Ali Shilatifard, Erin O'Shea, Jonathan S. Weissman, C. James Ingles, Timothy R. Hughes, John Parkinson, Mark Gerstein, Shoshana J. Wodak, Andrew Emili, Jack F. Greenblatt posted by 36 people aceol mpotamias Paccanaro Lab paccanarolab ajbattle mgomes jxl bicko cerca jiny Borelli lfriedl chad_davis balajis marcius tardigrade nirfriedman balabu j3xucite nickluscombe koller raiyar cjeans nicoleq kdl EBI-regulation BioinfoCIPF SGU-CIPF Evangelia csaveanu frohike carlk hplatero chasmand mapplab ethkim
	Genetic reconstruction of a functional transcriptional regulatory network. [My Copy] Nat Genet (8 April 2007) by Zhanzhi Hu, Patrick J J. Killion, Vishwanath R R. Iyer posted by 22 people sergiun TheresaNiederberger akraemer behindtherabbit ptrobajo dpollard xico nickluscombe zwang lizabeth dejori xingxu naegele Bioinformatics EisenLab WetBiology EBI-regulation ic4 generif_paper czeller mapplab siebert
	Predicting gene expression from sequence. [My Copy] Cell, Vol. 117, No. 2. (16 April 2004), pp. 185-198. by M. A. Beer, S. Tavazoie posted by 19 people rsaito thegoose2 TranscriptionalRegulationWithThermodynamicModels winterschlaefer C. elegans / WormBase tharris ana xwbcn adepace nickluscombe noano koller structural_bioinformatics Bioinformatics EisenLab EBI-regulation jrest phoenixzxl klo
	Regulatory element detection using correlation with expression. [My Copy] Nat Genet, Vol. 27, No. 2. (February 2001), pp. 167-171. by H. J. Bussemaker, H. Li, E. D. Siggia posted by 7 people dpollard nickluscombe EisenLab EBI-regulation heliopais tvdbulck isimpson
	Controlling the False Discovery Rate: A Practical and Powerful Approach to Multiple Testing [My Copy] Journal of the Royal Statistical Society. Series B (Methodological), Vol. 57, No. 1. (1995), pp. 289-300. by Yoav Benjamini, Yosef Hochberg posted by 43 people Biostatistics ctacmo abrentnall jperkins CulCog jlorent zufar bertelsen Zephyrus fisherp michaelbarton dakelley lwaldron polivares brianb ucbcjbm jfr xingxu emptyhb renewang Yanno sdvillal druvus natstreet czeller guhjy RMGraze oannes vplagnol frohike grahamc shigepong ccr axelon ugengma amsantos Bioinformatics Regulomics_UCHSC rschulz dragonrez isimpson vertikalist BTS-PT-AS-CS
	What is a gene, post-ENCODE? History and updated definition [My Copy] Genome Research, Vol. 17, No. 6. (June 2007), pp. 669-681. by Mark B. Gerstein, Can Bruce, Joel S. Rozowsky, et al.Deyou Zheng, Jiang Du, Jan O. Korbel, Olof Emanuelsson, Zhengdong D. Zhang, Sherman Weissman, Michael Snyder posted by 40 people daveGerrard Yanno inesdesantiago kentz ddcttrl bertelsen tmarscha thegoose2 burak guhjy carolh12 eweaver dpollard balicea dchughes dullhunk madhadron cottrell grahamc egonw ghattem sujaikumar Garamonfok PunkRock jasonbobe PredictER cabbagezs Jporci kmdaily krokicki antonkratz Bioinformatics EisenLab G4ID Genetics-of-Gambling Minty hpaces tharris altotor mjoach
	Genomic analysis of regulatory network dynamics reveals large topological changes. [My Copy] Nature, Vol. 431, No. 7006. (16 September 2004), pp. 308-312. by N. M. Luscombe, M. M. Babu, H. Yu, M. Snyder, S. A. Teichmann, M. Gerstein posted by 33 people bioNetwork_sysBio joseph_x_zhou kentz behindtherabbit BTS-PT-AS-CS vertikalist camster snuppepuppan hununu icases lna lfriedl alexg nirfriedman dgront nickluscombe kairita comb kengg gespim koller timflutre fishtank cjeans rebeccamancy dbk-lab kdl EBI-regulation TNT ColDyn Plantandetc faion carlk
	Ten Simple Rules for Getting Grants [My Copy] PLoS Comput Biol, Vol. 2, No. 2. (24 February 2006), e12. by Philip E. Bourne, Leo M. Chalupa posted by 27 people danilov tminze aaltenburger daforerog guhjy pengchy monkare schlady stancari abellogin Roswell Cancer Crosstalk Zephyrus marcius eweaver dullhunk cmm nickluscombe ucbcjbm rodney FAB-lab EBI-regulation BioinfoCIPF SGU-CIPF Kopelman_Group Torsten_Holmer elvinado fgibson
	A gene atlas of the mouse and human protein-encoding transcriptomes. [My Copy] Proceedings of the National Academy of Sciences of the United States of America, Vol. 101, No. 16. (20 April 2004), pp. 6062-6067. by Andrew I. Su, Tim Wiltshire, Serge Batalov, et al.Hilmar Lapp, Keith A. Ching, David Block, Jie Zhang, Richard Soden, Mimi Hayakawa, Gabriel Kreiman, Michael P. Cooke, John R. Walker, John B. Hogenesch posted by 21 people sjcockell daveGerrard harel_shein suizifish lawraga frohike daforerog dragonrez nickluscombe jeremymiller eukfn usagi-kirin cjeans asu EBI-regulation GeschwindLab shikin jdiezperezj caseybrown maralena gjuggler
	A chromatin-mediated mechanism for specification of conditional transcription factor targets [My Copy] Nat Genet, Vol. 38, No. 12. (12 December 2006), pp. 1446-1451. by Michael J. Buck, Jason D. Lieb posted by 6 people roys nickluscombe kengg olympos EBI-regulation Plantandetc
	Quantitative phylogenetic assessment of microbial communities in diverse environments. [My Copy] Science (New York, N.Y.), Vol. 315, No. 5815. (23 February 2007), pp. 1126-1130. by C. von Mering, P. Hugenholtz, J. Raes, et al.S. G. Tringe, T. Doerks, L. J. Jensen, N. Ward, P. Bork posted by 27 people hwright pkm michaelbarton idoerg sriesenfeld skembel kozo-ni ana nickluscombe michC bluto agg19954 TaqSys azazello structural_bioinformatics Bioinformatics EBI-regulation Microbial-Ecology Thaverkamp larsjuhljensen rvgomes mjetten microbiology_nijmegen jlgreen Green Lab iSEEM djkt
	A genomic code for nucleosome positioning [My Copy] Nature, Vol. 442, No. 7104. (17 August 2006), pp. 772-778. by Eran Segal, Yvonne Fondufe-Mittendorf, Lingyi Chen, et al.Annchristine Thastrom, Yair Field, Irene K. Moore, Ji-Ping Z. Wang, Jonathan Widom posted by 30 people TRHvidsten hagechouchin443 natstreet dakelley kentsis aalibes alokm marcius indigoviolet dchughes cconboy neveaire kengg johncumbers joshuashen joepickrell GustavoLacerda Biostatistics Computational-Genomics Bioinformatics EisenLab Neuroscience G4ID BioinfoCIPF SGU-CIPF Plantandetc Genetics-of-Gambling rschulz inesdesantiago sonjadaniela
	The Evolution of Transcriptional Regulation in Eukaryotes [My Copy] Mol Biol Evol, Vol. 20, No. 9. (1 September 2003), pp. 1377-1419. by Gregory A. Wray, Matthew W. Hahn, Ehab Abouheif, et al.James P. Balhoff, Margaret Pizer, Matthew V. Rockman, Laura A. Romano posted by 17 people athma provero wrowell ana dpollard adepace nickluscombe anatiferous mimulus_99 structural_bioinformatics Bioinformatics EisenLab EBI-regulation cisevol cis-regulatory-evolution emptyhb emmahe
	Geometric interpretation of gene coexpression network analysis. [My Copy] PLoS computational biology, Vol. 4, No. 8. (15 August 2008), e1000117. by Steve Horvath, Jun Dong posted by 23 people jeremymiller zufar dolchan sficklin isimpson rdiaz guhjy cswinburne jfr ptrobajo pengchy nolodie druvus aramesh2 kengg roys Ema tmmurali Borelli Totobox AbnerCYH davidchavalarias caseybrown
	Next-generation DNA sequencing. [My Copy] Nature biotechnology, Vol. 26, No. 10. (09 October 2008), pp. 1135-1145. by Jay Shendure, Hanlee Ji posted by 50 people Jporci daforerog dchughes hzoltan cthachuk giovenko heliopais seb1 installe niallhaslam Vincent_Rouilly rschulz fishtank bluto Annab katholt jmcq michaelbarton n00c jfr dna nzm farhat idoerg mhz mmartin antonkratz jbhiatt yupu Bioinformatics behindtherabbit guhjy Pascalichouchou frohike dakelley ptrobajo zwang Roswell Cancer Crosstalk Zephyrus psique natstreet druvus nuin alexknight reyez dbk Oxford Virology wsjames pengchy GeeSharpMinor
	Mapping and quantifying mammalian transcriptomes by RNA-Seq. [My Copy] Nature methods, Vol. 5, No. 7. (30 July 2008), pp. 621-628. by Ali Mortazavi, Brian A. Williams, Kenneth McCue, Lorian Schaeffer, Barbara Wold posted by 45 people manduca cthachuk hzoltan jwfoley heliopais juokcho aktas debasis bertelsen idonaldson darian stubrown Bioinformatics dswan ewilban1 mtagaya woodson8 burak jonilaserson inesdesantiago ThomasDOtto n00c GustavoG SIMR bioinformatics ghattem vplagnol druvus cfvillalta vmsr poschm dandaman shikin jmcq rschulz lp2 tmcphillips jfr myourshaw megraw GeeSharpMinor caseybrown xingxu guhjy shurjo gdb
	Network-based global inference of human disease genes. [My Copy] Molecular systems biology, Vol. 4 (6 May 2008) by X. Wu, R. Jiang, M. Q. Zhang, S. Li posted by 14 people carlk daforerog ilyashl saket tmmurali diamantis jfr maralena bootsy biomcgary guhjy zwang ptrobajo Borelli
	EagleView: A genome assembly viewer for next-generation sequencing technologies [My Copy] Genome Research, Vol. 18, No. 9. (11 September 2008), pp. 1538-1543. by Weichun Huang, Gabor Marth posted by 16 people Thaverkamp imaginatio hpaces darian n00c xingxu natstreet abizar druvus balicea bcondon fpattyn APRegier Neeperando GustavoLacerda guhjy
	Integrating large-scale functional genomic data to dissect the complexity of yeast regulatory networks. [My Copy] Nature genetics, Vol. 40, No. 7. (15 July 2008), pp. 854-861. by Jun Zhu, Bin Zhang, Erin N. Smith, et al.Becky Drees, Rachel B. Brem, Leonid Kruglyak, Roger E. Bumgarner, Eric E. Schadt posted by 21 people JoeBanks arider1 megraw TRHvidsten siebert Jarman Lab ggallone jo_davies suteedee burak realzhang kengg maralena ptrobajo tmmurali guhjy roys marck caseybrown djkt srp33
	Systematic determination of genetic network architecture. [My Copy] Nature genetics, Vol. 22, No. 3. (July 1999), pp. 281-285. by S. Tavazoie, J. D. Hughes, M. J. Campbell, R. J. Cho, G. M. Church posted by 13 people matted biblio24 rsaito senseable-urb adepace nickluscombe karfunkel EisenLab EBI-regulation maralena ellakat isimpson jo_davies
	An efficient algorithm for large-scale detection of protein families [My Copy] Nucl. Acids Res., Vol. 30, No. 7. (1 April 2002), pp. 1575-1584. by A. J. Enright, S. Van Dongen, C. A. Ouzounis posted by 25 people jperkins calderonv nedwards dakelley druvus treangen carlk cgaugain johanviklund chad_davis camster operon knaseanka indigoviolet skhadar nirfriedman dgront entropy gcalda GustavoLacerda dbk-lab EisenLab hpaces RebeccaHamer Borelli
	Computational discovery of gene modules and regulatory networks [My Copy] Nat Biotech, Vol. 21, No. 11. (12 October 2003), pp. 1337-1342. by Ziv Bar-Joseph, Georg K. Gerber, Tong I. Lee, et al.Nicola J. Rinaldi, Jane Y. Yoo, Francois Robert, D. Benjamin Gordon, Ernest Fraenkel, Tommi S. Jaakkola, Richard A. Young, David K. Gifford posted by 18 people stharward myzhang wangbo Borelli ggrot dragonrez bayesian wnpx nickluscombe koller frohike karfunkel EBI-regulation roys dquest balicea carlk tvdbulck
	Transcription factor and microRNA motif discovery: The Amadeus platform and a compendium of metazoan target sets [My Copy] Genome Research, Vol. 18, No. 7. (14 July 2008), pp. 1180-1189. by Chaim Linhart, Yonit Halperin, Ron Shamir posted by 15 people roys dolchan akshayk wowalz natstreet valeriehilgers jfr ealloza idonaldson maralena BergmanLab fpattyn isimpson tmmurali maximilianh
	The Connectivity Map: Using Gene-Expression Signatures to Connect Small Molecules, Genes, and Disease [My Copy] Science, Vol. 313, No. 5795. (29 September 2006), pp. 1929-1935. by Justin Lamb, Emily D. Crawford, David Peck, et al.Joshua W. Modell, Irene C. Blat, Matthew J. Wrobel, Jim Lerner, Jean-Philippe Brunet, Aravind Subramanian, Kenneth N. Ross, Michael Reich, Haley Hieronymus, Guo Wei, Scott A. Armstrong, Stephen J. Haggarty, Paul A. Clemons, Ru Wei, Steven A. Carr, Eric S. Lander, Todd R. Golub posted by 39 people gbloeb zufar ipark-kaist bertelsen mingzhi AbnerCYH Dulcinea dansullivanblk BragilMassoud guhjy kuhn jfr yas balajis marcius lhonigberg neveaire kengg ealloza koller mlovell jdiggans ezra jeremymiller frohike massivemayhem lp2 pablomendes Biostatistics Computational-Genomics Bioinformatics Neuroscience T_lab BioinfoCIPF SGU-CIPF GeschwindLab Plantandetc jdiezperezj askrajiv
	SOAP: short oligonucleotide alignment program [My Copy] Bioinformatics, Vol. 24, No. 5. (1 March 2008), pp. 713-714. by Ruiqiang Li, Yingrui Li, Karsten Kristiansen, Jun Wang posted by 27 people cthachuk hzoltan antonkratz adijr jmanning2k pachorip jmcq jsatkosk jasontsai n00c hpaces skembel maren natstreet druvus orzenil pengchy umit guhjy ghattem GustavoLacerda niallhaslam mdimon caseybrown urgi bozdagd waszak
	Ten Simple Rules for a Successful Collaboration [My Copy] PLoS Comput Biol, Vol. 3, No. 3. (30 March 2007), e44. by Quentin Vicens, Philip E. Bourne posted by 17 people danilov PaperCollector angelicabtto daforerog guhjy monkare abellogin Roswell Cancer Crosstalk Zephyrus leonardo dullhunk nickluscombe rodney EBI-regulation Kopelman_Group jfr ymel72
	Automated Querying of Genome Databases [My Copy] PLoS Computational Biology, Vol. 3, No. 1. (1 January 2007), e1. by Peter Schattner posted by 13 people natstreet bertelsen urgi daforerog polivares giovenko inesdesantiago druvus BergmanLab cisevol guhjy jfr Ayest
	Arabidopsis Transcription Factors: Genome-Wide Comparative Analysis Among Eukaryotes [My Copy] Science, Vol. 290, No. 5499. (15 December 2000), pp. 2105-2110. by J. L. Riechmann, J. Heard, G. Martin, et al.L. Reuber, -Z, Jiang, J. Keddie, L. Adam, O. Pineda, O. J. Ratcliffe, R. R. Samaha, R. Creelman, M. Pilgrim, P. Broun, J. Z. Zhang, D. Ghandehari, B. K. Sherman, -L posted by 9 people mlog megraw tny nickluscombe kengg Hummel EBI-regulation Plantandetc hplatero
	E-mail decay rates among corresponding authors in MEDLINE. The ability to communicate with and request materials from authors is being eroded by the expiration of e-mail addresses. [My Copy] EMBO reports, Vol. 7, No. 2. (February 2006), pp. 122-127. by Jonathan D. Wren, Joe E. Grissom, Tyrrell Conway posted by 5 people druvus daforerog hpiwowar nickluscombe EBI-regulation
	High-throughput sequence alignment using Graphics Processing Units [My Copy] BMC Bioinformatics, Vol. 8, No. 1. (2007), 474. by Michael Schatz, Cole Trapnell, Arthur Delcher, Amitabh Varshney posted by 24 people cthachuk aheilbut druvus BergmanLab polivares naoya n00c natstreet KCL & UCL Bioinformatics rschulz operon orzenil Yanno guhjy sephy lusk laughcry nedwards mdimon cndewey heliopais urgi gatech-compgenomics tpreeprem
	ZOOM! Zillions of oligos mapped [My Copy] Bioinformatics, Vol. 24, No. 21. (1 November 2008), pp. 2431-2437. by Hao Lin, Zefeng Zhang, Michael Q. Zhang, Bin Ma, Ming Li posted by 21 people hzoltan gbenson bozdagd adijr gdb n00c GeeSharpMinor inesdesantiago GustavoLacerda cthachuk guhjy abizar APRegier natstreet druvus caseybrown djkt wisdom_love umit Neeperando Stew
	Global Mapping of the Yeast Genetic Interaction Network [My Copy] Science, Vol. 303, No. 5659. (6 February 2004), pp. 808-813. by Amy H. Tong, Guillaume Lesage, Gary D. Bader, et al.Huiming Ding, Hong Xu, Xiaofeng Xin, James Young, Gabriel F. Berriz, Renee L. Brost, Michael Chang, YiQun Chen, Xin Cheng, Gordon Chua, Helena Friesen, Debra S. Goldberg, Jennifer Haynes, Christine Humphries, Grace He, Shamiza Hussein, Lizhu Ke, Nevan Krogan, Zhijian Li, Joshua N. Levinson, Hong Lu, Patrice Menard, Christella Munyana, Ainslie B. Parsons, Owen Ryan, Raffi Tonikian, Tania Roberts, Anne-Marie Sdicu, Jesse Shapiro, Bilal Sheikh, Bernhard Suter, Sharyl L. Wong, Lan V. Zhang, Hongwei Zhu, Christopher G. Burd, Sean Munro, Chris Sander, Jasper Rine, Jack Greenblatt, Matthias Peter, Anthony Bretscher, Graham Bell, Frederick P. Roth, Grant W. Brown, Brenda Andrews, Howard Bussey, Charles Boone posted by 33 people kentz colmryan meanerelk rdowell TheresaNiederberger dakelley kinop nzm roys ajbattle czeller ldfu pcahan1 lfriedl lyongu luispedro opheliav tabu Chue nirfriedman nickluscombe koller raiyar patrycjam patrycja_missiuro kdl EBI-regulation jiny chasmand tresch Takayuki ksiek carlk
	Characterization and Identification of MicroRNA Core Promoters in Four Model Species [My Copy] PLoS Comput Biol, Vol. 3, No. 3. (9 March 2007), e37. by Xuefeng Zhou, Jianhua Ruan, Guandong Wang, Weixiong Zhang posted by 18 people thegoose2 daforerog rpatward natstreet druvus C. elegans / WormBase tharris heliopais jfr tardigrade andersbj cdawson microRNA GIG ale maralena bootsy xili03
	Revealing modular organization in the yeast transcriptional network. [My Copy] Nat Genet, Vol. 31, No. 4. (August 2002), pp. 370-377. by J. Ihmels, G. Friedlander, S. Bergmann, O. Sarig, Y. Ziv, N. Barkai posted by 8 people adepace nickluscombe natstreet karfunkel EisenLab EBI-regulation ellakat siebert
	The Bioperl Toolkit: Perl Modules for the Life Sciences [My Copy] Genome Res., Vol. 12, No. 10. (1 October 2002), pp. 1611-1618. by Jason E. Stajich, David Block, Kris Boulez, et al.Steven E. Brenner, Stephen A. Chervitz, Chris Dagdigian, Georg Fuellen, James G. Gilbert, Ian Korf, Hilmar Lapp, Heikki Lehvaslaiho, Chad Matsalla, Chris J. Mungall, Brian I. Osborne, Matthew R. Pocock, Peter Schattner, Martin Senger, Lincoln D. Stein, Elia Stupka, Mark D. Wilkinson, Ewan Birney posted by 29 people ludaesch jsatkosk kiekyon Thaverkamp Cortel brdwilde daforerog GustavoLacerda krapnik jmeppley chad_davis rvosa indigoviolet skhadar dullhunk dgront stajich noby incovoma glycine tyrosine threonine valine nklee EisenLab FAB-lab hpaces sekmi ninch
	Global analysis of protein phosphorylation in yeast [My Copy] Nature, Vol. 438, No. 7068., pp. 679-684. by Jason Ptacek, Geeta Devgan, Gregory Michaud, et al.Heng Zhu, Xiaowei Zhu, Joseph Fasolo, Hong Guo, Ghil Jona, Ashton Breitkreutz, Richelle Sopko, Rhonda R. Mccartney, Martin C. Schmidt, Najma Rachidi, Soo-Jung Lee, Angie S. Mah, Lihao Meng, Michael J. R. Stark, David F. Stern, Claudio De Virgilio, Mike Tyers, Brenda Andrews, Mark Gerstein, Barry Schweitzer, Paul F. Predki, Michael Snyder posted by 13 people rsaito nedwards coela nzm MarcJungbluth tmmurali tuck balabu nickluscombe koller EBI-regulation carlk neils
	Principles of transcriptional control in the metabolic network of Saccharomyces cerevisiae. [My Copy] Nat Biotechnol, Vol. 22, No. 1. (January 2004), pp. 86-92. by J. Ihmels, R. Levy, N. Barkai posted by 12 people icases adepace nickluscombe koller arne EisenLab EBI-regulation TNT dIEMoSIRIS shung hryk siebert
	Accuracy and quality of massively parallel DNA pyrosequencing [My Copy] Genome Biology, Vol. 8, No. 7. (20 July 2007), R143. by Susan Huse, Julie Huber, Hilary Morrison, Mitchell Sogin, David Welch posted by 21 people nfparrish druvus n00c iSEEM jlgreen Thaverkamp orzenil mmartin floatingpoint Huub_odc gpappas jmeppley mblwhoi grahamc azazello GustavoLacerda Bioinformatics blobbybirdman gatech-compgenomics Olaf_Ilzins bozdagd
	Global variation in copy number in the human genome [My Copy] Nature, Vol. 444, No. 7118. (23 November 2006), pp. 444-454. by Richard Redon, Shumpei Ishikawa, Karen R. Fitch, et al.Lars Feuk, George H. Perry, T. Daniel Andrews, Heike Fiegler, Michael H. Shapero, Andrew R. Carson, Wenwei Chen, Eun K. Cho, Stephanie Dallaire, Jennifer L. Freeman, Juan R. Gonzalez, Monica Gratacos, Jing Huang, Dimitrios Kalaitzopoulos, Daisuke Komura, Jeffrey R. MacDonald, Christian R. Marshall, Rui Mei, Lyndal Montgomery, Kunihiro Nishimura, Kohji Okamura, Fan Shen, Martin J. Somerville, Joelle Tchinda, Armand Valsesia, Cara Woodwark, Fengtang Yang, Junjun Zhang, Tatiana Zerjal, Jane Zhang, Lluis Armengol, Donald F. Conrad, Xavier Estivill, Chris Tyler-Smith, Nigel P. Carter, Hiroyuki Aburatani, Charles Lee, Keith W. Jones, Stephen W. Scherer, Matthew E. Hurles posted by 49 people sameersoi lp2 ilyashl ajbattle darian jonilaserson jrvalcourt turnersd guhjy daforerog noushin Glires ivanek waszak jo_davies parkinson's disease references psique bpb jfr balajis pradiptaray dpollard mtagaya adepace aswin rdiaz qfwills ealloza vplagnol giovanni jeremymiller frohike vpschulz raiyar ramensky ccr azazello dbgrant colinveal xingxu Bioinformatics EisenLab BioinfoCIPF GeschwindLab steinmetzlab MBLAB srp33 Ema daed
	Using expression profiling data to identify human microRNA targets [My Copy] Nature Methods, Vol. 4, No. 12. (18 November 2007), pp. 1045-1049. by Jim C. Huang, Tomas Babak, Timothy W. Corson, et al.Gordon Chua, Sofia Khan, Brenda L. Gallie, Timothy R. Hughes, Benjamin J. Blencowe, Brendan J. Frey, Quaid D. Morris posted by 18 people danaiancu tonamswish daforerog megraw capitall askrajiv BenosLab gracio jfr tmmurali cjeans lp2 fpattyn Alexander_Kanitz guhjy heliopais microRNA giovenko
	A genetic signature of interspecies variations in gene expression. [My Copy] Nature genetics, Vol. 38, No. 7. (18 July 2006), pp. 830-834. by Itay Tirosh, Adina Weinberger, Miri Carmi, Naama Barkai posted by 13 people roys BergmanLab daveGerrard cabbagezs cis-regulatory-evolution cisevol adepace nickluscombe aswin cjeans EisenLab EBI-regulation caseybrown
	A Quick Guide to Organizing Computational Biology Projects [My Copy] PLoS Comput Biol, Vol. 5, No. 7. (31 July 2009), e1000424. by William S. Noble posted by 68 people annakcroft brianb nuin skembel pekrau Sergey_gerbek mordiano remoteFuture Yanno Pedro Martinez EvoDevo lab Barcelona aaltenburger marekrud guhjy dolchan frohike operon Orengo Group Journal Picks CorinYeats artaban421 antonkratz tomhebbron maren bayesian daveGerrard JoeBanks jcaddy somak bertelsen ptrobajo nperoni daforerog mmwoodman charris5 GustavoLacerda pmendes fgibson rdiaz Zephyrus heliopais franklu310 lmichan silberbauer leemond31 jlangdon robfsouza Bioinformatics - CRUK Stew pmung reyez kshameer djkt pawelsobko jjray dswan apaydin renatomilani VGreiff cabbagesofdoom ccsbs wei_tang fenghezi BergmanLab cisevol structural_bioinformatics McCammon barry sdaehne druvus
	Short read fragment assembly of bacterial genomes [My Copy] Genome Research, Vol. 18, No. 2. (1 February 2008), pp. 324-330. by Mark J. Chaisson, Pavel A. Pevzner posted by 18 people n00c pachorip APRegier thegoose2 dakelley Neeperando hpaces idoerg druvus jasontsai acn orzenil azazello GustavoLacerda dandaman caseybrown iris42 tharris
	Hawkeye: an interactive visual analytics tool for genome assemblies [My Copy] Genome Biology, Vol. 8, No. 3. (09 March 2007), R34. by Michael Schatz, Adam Phillippy, Ben Shneiderman, Steven Salzberg posted by 14 people darian n00c joule Thaverkamp hpaces orzenil GustavoLacerda natstreet druvus stajich azazello Mycology gatech-compgenomics Neeperando
	The Increasing Dominance of Teams in Production of Knowledge [My Copy] Science, Vol. 316, No. 5827. (18 May 2007), pp. 1036-1039. by Stefan Wuchty, Benjamin F. Jones, Brian Uzzi posted by 14 people NaCTeM Effie Parenting 2.0 hughesro dartar thor_bjarnason hpiwowar cmmorel dullhunk nickluscombe MariaChiaraP franzkurfess EBI-regulation fisherp
	Orthologous Transcription Factors in Bacteria Have Different Functions and Regulate Different Genes [My Copy] PLoS Comput Biol, Vol. 3, No. 9. (7 September 2007), e175. by Morgan N. Price, Paramvir S. Dehal, Adam P. Arkin posted by 15 people Jporci druvus treangen carlk operon dpollard dquest djkt zwang cabbagezs EisenLab heliopais blobbybirdman cis-regulatory-evolution Myxo group
	Transcription regulation and animal diversity [My Copy] Nature, Vol. 424, No. 6945. (10 July 2003), pp. 147-151. by Michael Levine, Robert Tjian posted by 14 people maximilianh provero GEB dlobo Lauren_Jones xico nickluscombe djkt lusk Jporci WetBiology EBI-regulation heliopais brant
	Mapping short DNA sequencing reads and calling variants using mapping quality scores. [My Copy] Genome research, Vol. 18, No. 11. (19 November 2008), pp. 1851-1858. by Heng Li, Jue Ruan, Richard Durbin posted by 42 people Julien_Fayolle seninp heliopais hzoltan cthachuk darshan adijr darian bozdagd jmanning2k stubrown APRegier SIMR bioinformatics ghattem jbhiatt mmartin michaelbarton BergmanLab polivares jonilaserson humburg n00c jessopher maren GeeSharpMinor vmsr vplagnol natstreet poschm jfr druvus dandaman xingxu rschulz jmcq inesdesantiago Neeperando nmohelli matthewsuderman bpb gdb farhat
	The impact of next-generation sequencing technology on genetics [My Copy] Trends in Genetics, Vol. 24, No. 3. (11 February 2008), pp. 133-141. by E. Mardis posted by 27 people rshe jasontsai n00c kiekyon jessopher daforerog psique idoerg jameswasmuth floatingpoint brdwilde neils jmcq jbsaltz guhjy dchughes djkt niallhaslam urgi zerojinx hpaces jlgreen Green Lab iSEEM cybaer1 giovenko druvus
	Clustering by passing messages between data points. [My Copy] Science (New York, N.Y.), Vol. 315, No. 5814. (16 February 2007), pp. 972-976. by Brendan J. Frey, Delbert Dueck posted by 39 people wxvrqs singhsh gavin1332 dgront babakap sen_cheng davidecellai zibuyu ilyashl trutat1 sfuniak doitian kuhn xtizon jfr jmeppley stevedebacker arjen sterovetta sdvillal nickluscombe rdiaz ianturton macle bluto rsantana grahamc ccr hexuming worldsun dimatura EBI-regulation paulovn daniel51 matjes johnkork XIANG iris_2001 soundray
	A Bayesian Networks Approach for Predicting Protein-Protein Interactions from Genomic Data [My Copy] Science, Vol. 302, No. 5644. (17 October 2003), pp. 449-453. by Ronald Jansen, Haiyuan Yu, Dov Greenbaum, et al.Yuval Kluger, Nevan J. Krogan, Sambath Chung, Andrew Emili, Michael Snyder, Jack F. Greenblatt, Mark Gerstein posted by 25 people cerca hagechouchin443 aelef Robinder lfriedl balajis opheliav yuval wnpx nickluscombe ruvido raiyar massivemayhem kdang dbgrant nedwards karfunkel kdl EBI-regulation Evangelia shung phoenixzxl penpen926 carlk frohike
	Aggressive assembly of pyrosequencing reads with mates [My Copy] Bioinformatics, Vol. 24, No. 24. (15 December 2008), pp. 2818-2824. by Jason R. Miller, Arthur L. Delcher, Sergey Koren, et al.Eli Venter, Brian P. Walenz, Anushka Brownley, Justin Johnson, Kelvin Li, Clark Mobarry, Granger Sutton posted by 20 people GustavoLacerda n00c APRegier jonilaserson dakelley idoerg orzenil ela503 natstreet druvus azazello acn jasontsai jmeppley BergmanLab cisevol SIMR bioinformatics malcook Neeperando djkt
	The Consensus Coding Sequences of Human Breast and Colorectal Cancers [My Copy] Science (7 September 2006), 1133427. by Tobias Sjoblom, Sian Jones, Laura D. Wood, et al.Williams D. Parsons, Jimmy Lin, Thomas Barber, Diana Mandelker, Rebecca J. Leary, Janine Ptak, Natalie Silliman, Steve Szabo, Phillip Buckhaults, Christopher Farrell, Paul Meeh, Sanford D. Markowitz, Joseph Willis, Dawn Dawson, James K. Willson, Adi F. Gazdar, James Hartigan, Leo Wu, Changsheng Liu, Giovanni Parmigiani, Ben H. Park, Kurtis E. Bachman, Nickolas Papadopoulos, Bert Vogelstein, Kenneth W. Kinzler, Victor E. Velculescu posted by 24 people backlin alessandrobrozzi wimufi aalibes bicko jfr tuck balajis nickluscombe rdiaz eisei jackjackjjj vicsta jtaylor emb51 ramensky massivemayhem cerami xingxu EBI-regulation mingzhi chrisamiller frohike gwenknight
	Neutral and adaptive variation in gene expression [My Copy] PNAS, Vol. 103, No. 14. (4 April 2006), pp. 5425-5430. by Andrew Whitehead, Douglas L. Crawford posted by 10 people cmm nickluscombe RowanBarrett knightjar natstreet FAB-lab EBI-regulation cisevol cis-regulatory-evolution klo
	Network motif-based identification of transcription factor-target gene relationships by integrating multi-source biological data [My Copy] BMC Bioinformatics, Vol. 9, No. 1. (2008) by Yuji Zhang, Jianhua Xuan, Benildo, Robert Clarke, Habtom Ressom posted by 8 people natstreet druvus heliopais dquest kengg bootsy bertelsen guhjy
	The synthetic genetic interaction spectrum of essential genes [My Copy] Nat Genet, Vol. 37, No. 10. (October 2005), pp. 1147-1152. by Armaity P. Davierwala, Jennifer Haynes, Zhijian Li, et al.Renee L. Brost, Mark D. Robinson, Lisa Yu, Sanie Mnaimneh, Huiming Ding, Hongwei Zhu, Yiqun Chen, Xin Cheng, Grant W. Brown, Charles Boone, Brenda J. Andrews, Timothy R. Hughes posted by 10 people tmmurali textoris okarsligil nirfriedman nickluscombe koller patrycjam patrycja_missiuro Bioinformatics EBI-regulation
	Large-Scale Mapping and Validation of Escherichia coli Transcriptional Regulation from a Compendium of Expression Profiles [My Copy] PLoS Biol, Vol. 5, No. 1. (9 January 2007), e8. by Jeremiah J. Faith, Boris Hayete, Joshua T. Thaden, et al.Ilaria Mogno, Jamey Wierzbowski, Guillaume Cottarel, Simon Kasif, James J. Collins, Timothy S. Gardner posted by 11 people frohike icases jfr teuder nickluscombe aswin EBI-regulation TNT heliopais austin roys