Nathaniel Street's Top Recommendations

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	Human genomes as email attachments [My Copy] Bioinformatics, Vol. 25, No. 2. (15 January 2009), pp. 274-275. by Scott Christley, Yiming Lu, Chen Li, Xiaohui Xie posted by 30 people daforerog hzoltan idonaldson kshameer operon guhjy druvus n00c dnewburger djkt mmartin baker-group sobolevnrm jfr psique BergmanLab cisevol GeeSharpMinor neils Bioinformatics dswan dullhunk siebert hpiwowar nuin cthachuk rschulz treangen renatomilani jmeppley
	Bioinformatics challenges of new sequencing technology [My Copy] Trends in Genetics, Vol. 24, No. 3. (11 February 2008), pp. 142-149. by M. Pop, S. Salzberg posted by 37 people Jporci cthachuk hzoltan hpaces heliopais imaginatio operon daforerog n00c ptrobajo orzenil APRegier katholt michaelbarton kiekyon thegoose2 xingxu floatingpoint polivares yupu treangen jmcq delenickphd giovenko jmeppley dchughes djkt GustavoLacerda niallhaslam urgi Neeperando jfr tharris mariakmejia caseybrown yoonk druvus
	A Quick Guide to Organizing Computational Biology Projects [My Copy] PLoS Comput Biol, Vol. 5, No. 7. (31 July 2009), e1000424. by William S. Noble posted by 64 people pekrau Sergey_gerbek mordiano remoteFuture Yanno Pedro Martinez EvoDevo lab Barcelona aaltenburger marekrud guhjy dolchan frohike operon Orengo Group Journal Picks CorinYeats artaban421 antonkratz tomhebbron maren bayesian daveGerrard JoeBanks jcaddy somak bertelsen ptrobajo nperoni daforerog mmwoodman charris5 GustavoLacerda pmendes fgibson rdiaz Zephyrus heliopais franklu310 lmichan silberbauer leemond31 jlangdon robfsouza Bioinformatics - CRUK Stew pmung reyez kshameer djkt pawelsobko jjray dswan apaydin renatomilani VGreiff cabbagesofdoom ccsbs wei_tang fenghezi BergmanLab cisevol structural_bioinformatics McCammon barry sdaehne druvus
	Mapping and quantifying mammalian transcriptomes by RNA-Seq. [My Copy] Nature methods, Vol. 5, No. 7. (30 July 2008), pp. 621-628. by Ali Mortazavi, Brian A. Williams, Kenneth McCue, Lorian Schaeffer, Barbara Wold posted by 44 people cthachuk hzoltan jwfoley heliopais juokcho aktas debasis bertelsen idonaldson darian stubrown Bioinformatics dswan ewilban1 mtagaya woodson8 burak jonilaserson inesdesantiago ThomasDOtto n00c GustavoG SIMR bioinformatics ghattem vplagnol druvus cfvillalta vmsr poschm dandaman shikin jmcq rschulz lp2 tmcphillips jfr myourshaw megraw GeeSharpMinor caseybrown xingxu guhjy shurjo gdb
	Bioinformatics enrichment tools: paths toward the comprehensive functional analysis of large gene lists [My Copy] Nucl. Acids Res., Vol. 37, No. 1. (1 January 2009), pp. 1-13. by Da W. Huang, Brad T. Sherman, Richard A. Lempicki posted by 47 people darian chasmand hzoltan ipark-kaist giovenko lwaldron jcaddy antonkratz Zephyrus shikin yaredo tonamswish ddunbar robfsouza Keywan daforerog ptrobajo rdiaz bertelsen Bioinformatics - CRUK Stew inesdesantiago heliopais ConklinLab AlexanderPico aviad_work ekotelnikova frohike aramesh2 jfr zufar ilyashl dolchan paszkows lptolik thomaskelder AbnerCYH neils tmmurali ealloza barriot druvus renatomilani pengchy phoenixzxl guhjy sjcockell
	Evolution of genes and genomes on the Drosophila phylogeny [My Copy] Nature, Vol. 450, No. 7167. (08 November 2007), pp. 203-218. posted by 42 people biomcgary nuttpo daveGerrard Anachff GustavoLacerda mqbphcw3 rpetrenko gwallau chica jlncdr aprasad gjuggler lizbiogen jbsaltz druvus pradiptaray pengchy operon tmmurali indigoviolet djkt timflutre stajich zwang Garamonfok lp2 Bioinformatics EisenLab CharlesM hpaces caseybrown emptyhb urgi Mycology noor PetrovLab isimpson balicea cisevol BergmanLab Drosophila-Genetics-Genomics-2008 hdopazo
	R/parallel - speeding up bioinformatics analysis with R [My Copy] BMC Bioinformatics, Vol. 9, No. 1. (22 September 2008), 390. by Gonzalo Vera, Ritsert Jansen, Remo Suppi posted by 28 people Zephyrus daveGerrard sotacam cassj walshtp dposada jfr Yanno siebert operon talponer guhjy dakelley chad_davis ptrobajo pengchy shikin robertlischke chrisamiller BergmanLab cisevol druvus renatomilani rdiaz nuin GeeSharpMinor neils jandot
	Biopython: freely available Python tools for computational molecular biology and bioinformatics [My Copy] Bioinformatics, Vol. 25, No. 11. (1 June 2009), pp. 1422-1423. by Peter J. A. Cock, Tiago Antao, Jeffrey T. Chang, et al.Brad A. Chapman, Cymon J. Cox, Andrew Dalke, Iddo Friedberg, Thomas Hamelryck, Frank Kauff, Bartek Wilczynski, Michiel J. L. de Hoon posted by 47 people Geknitics pekrau Systems_Biology Computational_Systems_Biology Sergey_gerbek hwright jfr karinaecomp applebyb klexa rdiaz FabienneGranier thegoose Structural Biology Group TorVergata oteri cmzmasek jwm guhjy Journal picks AlexBateman daforerog ltitodem Thaverkamp baker-group sobolevnrm psique Bioinformatics dswan neils dullhunk bertelsen Vincent_Rouilly gwallau brianb jorisslob svenrahmann jmeppley VGreiff sjcockell druvus Software-Architecture OER_Open_Educational_Resources Method_Engineering_Services jago kshameer operon svozil
	Support Vector Machines and Kernels for Computational Biology [My Copy] PLoS Comput Biol, Vol. 4, No. 10. (31 October 2008), e1000173. by Asa Ben-Hur, Cheng S. Ong, Sören Sonnenburg, Bernhard Schölkopf, Gunnar Rätsch posted by 36 people guhjy VGreiff tomhebbron ucbcjbm thegoose Zephyrus phoenixzxl winterschlaefer kshameer Bioinformatics svozil mmartin jfr MarcoAlvarez baker-group sobolevnrm Yanno Scis0000002 srp33 GustavoLacerda nuin rdiaz dakelley rschulz Borelli taguchi VisionLab kristina bayesian chad_davis mdstobbe tny giovenko markchen druvus GeeSharpMinor
	Microarray-based gene set analysis: a comparison of current methods [My Copy] BMC Bioinformatics, Vol. 9, No. 1. (2008), 502. by Sarah Song, Michael Black posted by 28 people bertelsen giovenko dipenps holecm lwaldron jfr ptrobajo ekotelnikova zufar buyske guhjy heliopais fhalbrit lptolik balicea daforerog Roswell Cancer Crosstalk Zephyrus irinamohorianu dswan shikin nuin hersh006 behindtherabbit colinDotAIBN druvus barriot GeeSharpMinor
	BayesCall: A model-based base-calling algorithm for high-throughput short-read sequencing [My Copy] Genome Research, Vol. 19, No. 10. (6 October 2009), pp. 1884-1895. by Wei-Chun Kao, Kristian Stevens, Yun S. Song posted by 16 people heliopais dakelley lp2 megraw rdiaz torfinnnome djkt n00c farhat druvus BergmanLab polivares Mycology stajich fpattyn jbhiatt
	Strategic Reading, Ontologies, and the Future of Scientific Publishing [My Copy] Science, Vol. 325, No. 5942. (14 August 2009), pp. 828-832. by Allen H. Renear, Carole L. Palmer posted by 56 people BergmanLab cisevol aaltenburger radagabriel antonkratz Semantic networks in translation guhjy Orengo Group Journal Picks robertrentzsch artaban421 malkav30 conne262 clarabermudez jclau pick600 CulCog yuifu daforerog smuekusc robertlischke nperoni drevicko eisdur Ubicomp STS Convention on Knowledge Commons Integrative Expertise for Global Health jago dayjm sebpaquet tnhh rickl Tomste fheintz reyez biologyeditors fgibson lmichan moernerlab samjlord rdiaz polivares Journal picks jandot dullhunk deanmalmgren druvus modza emptyhb plosmedicine renatomilani Zephyrus applebyb newtekken rschulz PaperCollector
	Towards a cyberinfrastructure for the biological sciences: progress, visions and challenges [My Copy] Nat Rev Genet, Vol. 9, No. 9. (September 2008), pp. 678-688. by Lincoln D. Stein posted by 33 people lmichan artaban421 tomjad n00c PaoloRomano thegoose2 fisherp emayorga nuin rdiaz bmaust guhjy carolh12 ilya alaninmcr druvus srp33 dullhunk tharris stajich Mycology mrochman dansullivanblk neils jandot GustavoLacerda jago Integrative Expertise for Global Health Convention on Knowledge Commons Poverty Alleviation from Access to Knowledge fgibson thomaskelder sjcockell
	Widespread changes in protein synthesis induced by microRNAs [My Copy] Nature, Vol. 455, No. 7209. (30 July 2008), pp. 58-63. by Matthias Selbach, Bjorn Schwanhausser, Nadine Thierfelder, Zhuo Fang, Raya Khanin, Nikolaus Rajewsky posted by 29 people dandaman framancuso inesdesantiago lwaldron danaiancu fishtank dswan TRHvidsten pengchy valeriehilgers druvus guhjy martin-novak cajunsushi microRNA heliopais BTS-PT-AS-CS vertikalist jfr caizhiqiang psique megraw neils j_rodriguez erel10 maralena reyez mtagaya gdb
	Accurate whole human genome sequencing using reversible terminator chemistry. [My Copy] Nature, Vol. 456, No. 7218. (6 November 2008), pp. 53-59. by David R. Bentley, Shankar Balasubramanian, Harold P. Swerdlow, et al.Geoffrey P. Smith, John Milton, Clive G. Brown, Kevin P. Hall, Dirk J. Evers, Colin L. Barnes, Helen R. Bignell, Jonathan M. Boutell, Jason Bryant, Richard J. Carter, R. Keira Cheetham, Anthony J. Cox, Darren J. Ellis, Michael R. Flatbush, Niall A. Gormley, Sean J. Humphray, Leslie J. Irving, Mirian S. Karbelashvili, Scott M. Kirk, Heng Li, Xiaohai Liu, Klaus S. Maisinger, Lisa J. Murray, Bojan Obradovic, Tobias Ost, Michael L. Parkinson, Mark R. Pratt, Isabelle M. Rasolonjatovo, Mark T. Reed, Roberto Rigatti, Chiara Rodighiero, Mark T. Ross, Andrea Sabot, Subramanian V. Sankar, Aylwyn Scally, Gary P. Schroth, Mark E. Smith, Vincent P. Smith, Anastassia Spiridou, Peta E. Torrance, Svilen S. Tzonev, Eric H. Vermaas, Klaudia Walter, Xiaolin Wu, Lu Zhang, Mohammed D. Alam, Carole Anastasi, Ify C. Aniebo, David M. Bailey, Iain R. Bancarz, Saibal Banerjee, Selena G. Barbour, Primo A. Baybayan, Vincent A. Benoit, Kevin F. Benson, Claire Bevis, Phillip J. Black, Asha Boodhun, Joe S. Brennan, John A. Bridgham, Rob C. Brown, Andrew A. Brown, Dale H. Buermann, Abass A. Bundu, James C. Burrows, Nigel P. Carter, Nestor Castillo, Maria Chiara E Catenazzi, Simon Chang, R. Neil Cooley, Natasha R. Crake, Olubunmi O. Dada, Konstantinos D. Diakoumakos, Belen Dominguez-Fernandez, David J. Earnshaw, Ugonna C. Egbujor, David W. Elmore, Sergey S. Etchin, Mark R. Ewan, Milan Fedurco, Louise J. Fraser, Karin V. Fuentes Fajardo, W. Scott Furey, David George, Kimberley J. Gietzen, Colin P. Goddard, George S. Golda, Philip A. Granieri, David E. Green, David L. Gustafson, Nancy F. Hansen, Kevin Harnish, Christian D. Haudenschild, Narinder I. Heyer, Matthew M. Hims, Johnny T. Ho, Adrian M. Horgan, Katya Hoschler, Steve Hurwitz, Denis V. Ivanov, Maria Q. Johnson, Terena James, T. A. Huw Jones, Gyoung-Dong D. Kang, Tzvetana H. Kerelska, Alan D. Kersey, Irina Khrebtukova, Alex P. Kindwall, Zoya Kingsbury, Paula I. Kokko-Gonzales, Anil Kumar, Marc A. Laurent, Cynthia T. Lawley, Sarah E. Lee, Xavier Lee, Arnold K. Liao, Jennifer A. Loch, Mitch Lok, Shujun Luo, Radhika M. Mammen, John W. Martin, Patrick G. McCauley, Paul McNitt, Parul Mehta, Keith W. Moon, Joe W. Mullens, Taksina Newington, Zemin Ning, Bee Ling Ng, Sonia M. Novo, Michael J. O'Neill, Mark A. Osborne, Andrew Osnowski, Omead Ostadan, Lambros L. Paraschos, Lea Pickering, Andrew C. Pike, Alger C. Pike, D. Chris Pinkard, Daniel P. Pliskin, Joe Podhasky, Victor J. Quijano, Come Raczy, Vicki H. Rae, Stephen R. Rawlings, Ana Chiva Rodriguez, Phyllida M. Roe, John Rogers, Maria C. Rogert Bacigalupo, Nikolai Romanov, Anthony Romieu, Rithy K. Roth, Natalie J. Rourke, Silke T. Ruediger, Eli Rusman, Raquel M. Sanches-Kuiper, Martin R. Schenker, Josefina M. Seoane, Richard J. Shaw, Mitch K. Shiver, Steven W. Short, Ning L. Sizto, Johannes P. Sluis, Melanie A. Smith, Jean Ernest Sohna Sohna, Eric J. Spence, Kim Stevens, Neil Sutton, Lukasz Szajkowski, Carolyn L. Tregidgo, Gerardo Turcatti, Stephanie Vandevondele, Yuli Verhovsky, Selene M. Virk, Suzanne Wakelin, Gregory C. Walcott, Jingwen Wang, Graham J. Worsley, Juying Yan, Ling Yau, Mike Zuerlein, Jane Rogers, James C. Mullikin, Matthew E. Hurles, Nick J. McCooke, John S. West, Frank L. Oaks, Peter L. Lundberg, David Klenerman, Richard Durbin, Anthony J. Smith posted by 31 people hzoltan rshe pst gbenson giovenko n00c clearbluespring xingxu dna austin jessopher daforerog vmsr jfr azazello nuin usagi-kirin Archaeogenetics SIMR bioinformatics malcook psique tsherig jbhiatt pengchy reyez jmcq inesdesantiago ojabado caseybrown pkonings djkt
	The Systems Biology Graphical Notation [My Copy] Nature Biotechnology, Vol. 27, No. 8. (07 August 2009), pp. 735-741. by Nicolas L. Novere, Michael Hucka, Huaiyu Mi, et al.Stuart Moodie, Falk Schreiber, Anatoly Sorokin, Emek Demir, Katja Wegner, Mirit I. Aladjem, Sarala M. Wimalaratne, Frank T. Bergman, Ralph Gauges, Peter Ghazal, Hideya Kawaji, Lu Li, Yukiko Matsuoka, Alice Villeger, Sarah E. Boyd, Laurence Calzone, Melanie Courtot, Ugur Dogrusoz, Tom C. Freeman, Akira Funahashi, Samik Ghosh, Akiya Jouraku, Sohyoung Kim, Fedor Kolpakov, Augustin Luna, Sven Sahle, Esther Schmidt, Steven Watterson, Guanming Wu, Igor Goryanin, Douglas B. Kell, Chris Sander, Herbert Sauro, Jacky L. Snoep, Kurt Kohn, Hiroaki Kitano posted by 42 people singhsh greg tonamswish pablocarb josepe abc623 daforerog abhishek_tiwari Orengo Group Journal Picks robertrentzsch ngehlenborg pekrau thegoose bertelsen fgibson Borelli thomaskelder pmendes dullhunk polivares chasmand brianb roys torfinnnome guhjy Zephyrus lenov reyez allysonlister apocapoc renatomilani VGreiff druvus sjcockell Journal picks jandot megraw leliavski frohike Neuroblastoma fpattyn jhyang
	Most mammalian mRNAs are conserved targets of microRNAs [My Copy] Genome Research, Vol. 19, No. 1. (27 January 2009), pp. 92-105. by Robin C. Friedman, Kyle K. Farh, Christopher B. Burge, David P. Bartel posted by 20 people hzoltan giovenko gbloeb sterovetta gdb guhjy jfr qfwills pengchy druvus felsani microRNA heliopais dchughes valeriehilgers Bioinformatics - CRUK Stew fpattyn MSchipper samgj
	Local DNA topography correlates with functional noncoding regions of the human genome. [My Copy] Science (New York, N.Y.), Vol. 324, No. 5925. (17 April 2009), pp. 389-392. by Stephen C. Parker, Loren Hansen, Hatice Ozel O. Abaan, Thomas D. Tullius, Elliott H. Margulies posted by 45 people BergmanLab daveGerrard operon sujaikumar antonkratz pradiptaray roys gjuggler benjaminsb gdb hagechouchin443 tomtullius scjparker psique orzenil emptyhb ilyashl coela VGreiff APRegier myzhang pkonings akundaje athma absterga rpatward timflutre Mycology stajich bpcusack jbhiatt djkt structural_bioinformatics dhlbh friendpine RockmanLab EisenLab cis-regulatory-evolution dpollard inesdesantiago JustinCrocker aprasad maximilianh idonaldson kshundyak
	Metagenome Annotation Using a Distributed Grid of Undergraduate Students [My Copy] PLoS Biol, Vol. 6, No. 11. (25 November 2008), e296. by Pascal Hingamp, Céline Brochier, Emmanuel Talla, Daniel Gautheret, Denis Thieffry, Carl Herrmann posted by 21 people daforerog operon azazello Bioinformatics - CRUK Stew JustinCrocker nuin jmeppley xingxu guhjy nitiniitk Centre de Recherches Interdisciplinaires dbikard dchughes druvus neils iSEEM djkt ptrobajo dullhunk treangen
	A Bioinformatician's Guide to Metagenomics [My Copy] Microbiol. Mol. Biol. Rev., Vol. 72, No. 4. (1 December 2008), pp. 557-578. by Victor Kunin, Alex Copeland, Alla Lapidus, Konstantinos Mavromatis, Philip Hugenholtz posted by 48 people Orengo Group Journal Picks CorinYeats sconlan jasontsai Shared Literature Resource of the Microbial Fitness Group - MPI Bremen halinat hwright michaelbarton taylor73 esyoun bluto idoerg hpaces iSEEM skembel inquil EKotlarska anphony stajich sharpton vrich Papers recommended by the Roscoff Plankton Group Microbial-Ecology vaulot adgrativol Translational Bioinformatics jakechen balicea dbk GustavoLacerda guhjy hessec fhalbrit Roswell Cancer Crosstalk Zephyrus anazhu dswan sjcockell Borelli druvus azazello kinestetika jmeppley neils microbiology_nijmegen Katje allysonlister skato_toyaku
	Discovery of functional elements in 12 Drosophila genomes using evolutionary signatures. [My Copy] Nature, Vol. 450, No. 7167. (8 November 2007), pp. 219-232. by A. Stark, M. F. Lin, P. Kheradpour, et al.J. S. Pedersen, L. Parts, J. W. Carlson, M. A. Crosby, M. D. Rasmussen, S. Roy, A. N. Deoras, J. G. Ruby, J. Brennecke, , , E. Hodges, A. S. Hinrichs, A. Caspi, B. Paten, S. W. Park, M. V. Han, M. L. Maeder, B. J. Polansky, B. E. Robson, S. Aerts, J. van Helden, B. Hassan, D. G. Gilbert, D. A. Eastman, M. Rice, M. Weir, M. W. Hahn, Y. Park, C. N. Dewey, L. Pachter, W. J. Kent, D. Haussler, E. C. Lai, D. P. Bartel, G. J. Hannon, T. C. Kaufman, M. B. Eisen, A. G. Clark, D. Smith, S. E. Celniker, W. M. Gelbart, M. Kellis posted by 25 people microRNA heliopais anphony kieran101 Neeperando pradiptaray rouault druvus operon tmmurali djkt timflutre stajich lp2 cabbagezs nklee hpaces roys caseybrown gjuggler Mycology shuzhens PetrovLab cisevol Drosophila-Genetics-Genomics-2008
	ProbeMatch: rapid alignment of oligonucleotides to genome allowing both gaps and mismatches. [My Copy] Bioinformatics (Oxford, England), Vol. 25, No. 11. (1 June 2009), pp. 1424-1425. by You Jung J. Kim, Nikhil Teletia, Victor Ruotti, et al.Christopher A. Maher, Arul M. Chinnaiyan, Ron Stewart, James A. Thomson, Jignesh M. Patel posted by 15 people Bioinformatics jfr mmartin n00c guhjy nuin idonaldson Journal picks AlexBateman bmajoros humburg Thaverkamp druvus svenrahmann djkt
	Use and misuse of the gene ontology annotations [My Copy] Nature Reviews Genetics, Vol. 9, No. 7. (13 May 2008), pp. 509-515. by Seung Yon Rhee, Valerie Wood, Kara Dolinski, Sorin Draghici posted by 44 people singhsh epigenetics davidmam Thaverkamp druvus dullhunk 8_01 suizan dolchan Borelli Zephyrus VGreiff klo thomaskelder ilyashl phoenixzxl MarcoAlvarez isakemal bertelsen daforerog jfr djkt guhjy aheilbut mariakmejia cmzmasek A_Olympia logics of knowledge realzhang carlk roys gjuggler fpattyn RamuAnandakrishnan ptrobajo giovenko cabbagesofdoom tmmurali renatomilani capitall marck rvosa FAB-lab bpcusack
	Repeatability of published microarray gene expression analyses [My Copy] Nature Genetics, Vol. 41, No. 2. (28 January 2008), pp. 149-155. by John P. A. Ioannidis, David B. Allison, Catherine A. Ball, et al.Issa Coulibaly, Xiangqin Cui, Aedin C. Culhane, Mario Falchi, Cesare Furlanello, Laurence Game, Giuseppe Jurman, Jon Mangion, Tapan Mehta, Michael Nitzberg, Grier P. Page, Enrico Petretto, Vera van Noort posted by 23 people hzoltan Roswell Cancer Crosstalk heliopais ericrpaquet guhjy greg frohike TRHvidsten giovenko jfr rdiaz zufar ptrobajo floatingpoint felsani nuin daforerog cabbagesofdoom dswan Zephyrus inesdesantiago djkt paszkows
	An active registry for bioinformatics web services. [My Copy] Bioinformatics (Oxford, England), Vol. 25, No. 16. (15 August 2009), pp. 2090-2091. by S. Pettifer, D. Thorne, P. McDermott, et al.T. Attwood, J. Baran, J. C. Bryne, T. Hupponen, D. Mowbray, G. Vriend posted by 17 people pekrau joachimbaran pkonings Bioinformatics dswan Journal picks niallhaslam n00c druvus guhjy flipip23 chrisamiller nuin dbk kshameer dullhunk neils
	Mapping and sequencing of structural variation from eight human genomes [My Copy] Nature, Vol. 453, No. 7191. (01 May 2008), pp. 56-64. by Jeffrey M. Kidd, Gregory M. Cooper, William F. Donahue, et al.Hillary S. Hayden, Nick Sampas, Tina Graves, Nancy Hansen, Brian Teague, Can Alkan, Francesca Antonacci, Eric Haugen, Troy Zerr, N. Alice Yamada, Peter Tsang, Tera L. Newman, Eray Tuzun, Ze Cheng, Heather M. Ebling, Nadeem Tusneem, Robert David, Will Gillett, Karen A. Phelps, Molly Weaver, David Saranga, Adrianne Brand, Wei Tao, Erik Gustafson, Kevin McKernan, Lin Chen, Maika Malig, Joshua D. Smith, Joshua M. Korn, Steven A. McCarroll, David A. Altshuler, Daniel A. Peiffer, Michael Dorschner, John Stamatoyannopoulos, David Schwartz, Deborah A. Nickerson, James C. Mullikin, Richard K. Wilson, Laurakay Bruhn, Maynard V. Olson, Rajinder Kaul, Douglas R. Smith, Evan E. Eichler posted by 38 people hzoltan n00c daed fstrozzi sameersoi jonilaserson ilyashl rdiaz dakelley xingxu alweber APRegier Annab smiddha daforerog vkwn frohike waszak matthewsuderman jfr hpaces Ema bpb dchughes djkt balicea shikin GeneGo psique kintoki kaniko aprasad vplagnol maximilianh chrisamiller guhjy skoch3 Koch_Lab
	Alignment Uncertainty and Genomic Analysis [My Copy] Science, Vol. 319, No. 5862. (25 January 2008), pp. 473-476. by Karen M. Wong, Marc A. Suchard, John P. Huelsenbeck posted by 36 people Jporci operon walshtp darian ptrobajo friendpine skembel druvus treangen bpb aprasad dayjm pradiptaray dpollard tny djkt cjeans zwang lisa1 cactus biomcgary lilou EisenLab microbiology_nijmegen dandaman gjuggler renatomilani mclarenv youdon bpcusack guhjy jdelcampo adacier gracio timflutre jfr
	Comparison of small n statistical tests of differential expression applied to microarrays. [My Copy] BMC bioinformatics, Vol. 10, No. 1. (2009) by Carl Murie, Owen Woody, Anna Y. Lee, Robert Nadon posted by 13 people hzoltan zufar guhjy daforerog rdiaz renatomilani Bioinformatics dswan Zephyrus behindtherabbit SIMR bioinformatics ghattem druvus
	Advanced Genomic Data Mining [My Copy] PLoS Comput Biol, Vol. 4, No. 9. (2008), e1000121. by Xosé M. Fernández-Suárez, Ewan Birney posted by 21 people Zephyrus mhamada daforerog kshameer jfr guhjy taguchi giovenko inesdesantiago usagi-kirin fgibson BergmanLab cisevol rdiaz aramesh2 sunhwan druvus mitko jandot jameswasmuth dullhunk
	The automation of science. [My Copy] Science (New York, N.Y.), Vol. 324, No. 5923. (3 April 2009), pp. 85-89. by Ross D. King, Jem Rowland, Stephen G. Oliver, et al.Michael Young, Wayne Aubrey, Emma Byrne, Maria Liakata, Magdalena Markham, Pinar Pir, Larisa N. Soldatova, Andrew Sparkes, Kenneth E. Whelan, Amanda Clare posted by 59 people singhsh Sergey_gerbek schwartzjmc yyfwuhan antonkratz CulCog ckai1 jcaddy thegoose tommcdonagh tonamswish qwermish axeltan ocs TobiasAbenius CameronNeylon guhjy davidcsterratt bcondon Scis0000002 kevinemamy TRHvidsten emiko Zephyrus arne muraken vagoskar katiehumphry NaCTeM Effie robertknight acrmartins psique dbikard tyrell_turing Tomste renatomilani subhacom druvus ramanuja sen_cheng coela VGreiff hagechouchin443 Benja austin stober rdiaz Fortran napvasconcelos mikel_egana allysonlister dullhunk fgibson pkonings MetabolicModeling JeremyZucker jbhiatt tmmurali
	Short read fragment assembly of bacterial genomes [My Copy] Genome Research, Vol. 18, No. 2. (1 February 2008), pp. 324-330. by Mark J. Chaisson, Pavel A. Pevzner posted by 18 people n00c pachorip APRegier thegoose2 dakelley Neeperando hpaces idoerg druvus jasontsai acn orzenil azazello GustavoLacerda dandaman caseybrown iris42 tharris
	De novo bacterial genome sequencing: Millions of very short reads assembled on a desktop computer [My Copy] Genome Research, Vol. 18, No. 5. (10 May 2008), pp. 802-809. by David Hernandez, Patrice FranÃ§ois, Laurent Farinelli, Magne Ãsterã¥s, Jacques Schrenzel posted by 20 people n00c GeeSharpMinor pachorip operon druvus dakelley DeNovoAssembly-SIMR acn nmohelli GustavoLacerda jmeppley stajich azazello microbiology_nijmegen Katje Mycology gatech-compgenomics iris42 balicea Neeperando
	Web services at the European Bioinformatics Institute-2009 [My Copy] Nucl. Acids Res., Vol. 37, No. suppl_2. (1 July 2009), pp. W6-10. by Hamish Mcwilliam, Franck Valentin, Mickael Goujon, et al.Weizhong Li, Menaka Narayanasamy, Jenny Martin, Teresa Miyar, Rodrigo Lopez posted by 16 people jeargle artaban421 n00c daforerog Bioinformatics dswan guhjy cassj hryk fgibson operon fisherp druvus alaninmcr dullhunk neils
	Geometric interpretation of gene coexpression network analysis. [My Copy] PLoS computational biology, Vol. 4, No. 8. (15 August 2008), e1000117. by Steve Horvath, Jun Dong posted by 23 people jeremymiller zufar dolchan sficklin isimpson rdiaz guhjy cswinburne jfr ptrobajo pengchy nolodie druvus aramesh2 kengg roys Ema tmmurali Borelli Totobox AbnerCYH davidchavalarias caseybrown
	Insights from genomic profiling of transcription factors [My Copy] Nature Reviews Genetics, Vol. 10, No. 9. (11 August 2009), pp. 605-616. by Peggy J. Farnham posted by 20 people heliopais inesdesantiago fenghezi nklee samanthacooper fpattyn druvus frohike stubrown Journal picks qayub megraw TRHvidsten Chinnaiyan Lab mkiyer ericrpaquet ilyashl jbhiatt idonaldson danmaclean
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	Detecting SNPs and estimating allele frequencies in clonal bacterial populations by sequencing pooled DNA. [My Copy] Bioinformatics (Oxford, England), Vol. 25, No. 16. (15 August 2009), pp. 2074-2075. by Kathryn E. Holt, Yik Y. Teo, Heng Li, et al.Satheesh Nair, Gordon Dougan, John Wain, Julian Parkhill posted by 10 people jsatkosk jandot Mycology stajich iSEEM djkt guhjy farhat sandfire druvus
	PineSAP--sequence alignment and SNP identification pipeline [My Copy] Bioinformatics, Vol. 25, No. 19. (1 October 2009), pp. 2609-2610. by Jill L. Wegrzyn, Jennifer M. Lee, John Liechty, David B. Neale posted by 8 people jasontsai jsatkosk daforerog djkt operon nuin n00c druvus
	Bluejay 1.0: genome browsing and comparison with rich customization provision and dynamic resource linking. [My Copy] BMC bioinformatics, Vol. 9, No. 1. (2008) by J. Soh, P. M. Gordon, M. L. Taschuk, et al.A. Dong, A. C. Ah-Seng, A. L. Turinsky, C. W. Sensen posted by 12 people dcolosi treangen guhjy Mycology stajich barriot Roswell Cancer Crosstalk Zephyrus joaocarrico GeeSharpMinor neils druvus
	Evolution of Regulatory Sequences in 12 Drosophila Species [My Copy] PLoS Genet, Vol. 5, No. 1. (January 2009), e1000330. by Jaebum Kim, Xin He, Saurabh Sinha posted by 16 people daveGerrard kevinemamy RockmanLab dpollard caseybrown druvus WanderingAengus BergmanLab JustinCrocker cis-regulatory-evolution cisevol cajunsushi djkt emptyhb cabbagesofdoom Stew
	Alignment and Prediction of cis-Regulatory Modules Based on a Probabilistic Model of Evolution [My Copy] PLoS Comput Biol, Vol. 5, No. 3. (13 March 2009), e1000299. by Xin He, Xu Ling, Saurabh Sinha posted by 10 people roys megraw lusk TRHvidsten kieran101 nuin djkt mhamada maximilianh druvus
	Web API for biology with a workflow navigation system [My Copy] Nucl. Acids Res., Vol. 37, No. suppl_2. (1 July 2009), pp. W11-16. by Yeondae Kwon, Yasumasa Shigemoto, Yoshikazu Kuwana, Hideaki Sugawara posted by 10 people pekrau tprpip Bioinformatics dswan nuin cassj druvus dullhunk guhjy daforerog
	Getting Started in Text Mining: Part Two [My Copy] PLoS Comput Biol, Vol. 5, No. 7. (31 July 2009), e1000411. by Andrey Rzhetsky, Michael Seringhaus, Mark B. Gerstein posted by 16 people artaban421 sobolevnrm daforerog fgibson dullhunk guhjy kiekyon lmichan NIlz dbmi-nlp henk-cul reyez dswan devindrown nuin druvus
	Probabilistic Phylogenetic Inference with Insertions and Deletions [My Copy] PLoS Comput Biol, Vol. 4, No. 9. (2008), e1000172. by Elena Rivas, Sean R. Eddy posted by 13 people BioNica mhamada treangen iSEEM pradiptaray zwang nuin timflutre druvus djkt aprasad gjuggler emptyhb
	Rapid and Accurate Large-Scale Coestimation of Sequence Alignments and Phylogenetic Trees [My Copy] Science, Vol. 324, No. 5934. (19 June 2009), pp. 1561-1564. by Kevin Liu, Sindhu Raghavan, Serita Nelesen, C. Randal Linder, Tandy Warnow posted by 31 people gjuggler parnell kinestetika Orengo Group Journal Picks robertrentzsch xianjun gdb jbhiatt Mycology stajich operon biomcgary kieran101 zwang michaelbarton vingron tatman303 hryk lizbiogen pkonings Journal picks ppgardne dokky aprasad timflutre inquil TRHvidsten iSEEM djkt fenghezi phoenixzxl
	F-Seq: a feature density estimator for high-throughput sequence tags [My Copy] Bioinformatics, Vol. 24, No. 21. (1 November 2008), pp. 2537-2538. by Alan P. Boyle, Justin Guinney, Gregory E. Crawford, Terrence S. Furey posted by 21 people hzoltan n00c darian idonaldson michaelbarton inesdesantiago gdb ewilban1 tonamswish JLab BergmanLab guhjy kmdaily cassj fhalbrit jfr rschulz polivares cthachuk zhouyu aprasad
	The impact of microRNAs on protein output. [My Copy] Nature, Vol. 455, No. 7209. (4 September 2008), pp. 64-71. by Daehyun Baek, Judit Villén, Chanseok Shin, Fernando D. Camargo, Steven P. Gygi, David P. Bartel posted by 27 people framancuso danaiancu fishtank gderwin pengchy valeriehilgers guhjy kmdaily martin-novak samgj microRNA heliopais askrajiv natsdorf jfr frohike giovenko mtagaya megraw djkt brianb emptyhb erel10 maralena ajaymalik caizhiqiang gdb
	Relative Impact of Nucleotide and Copy Number Variation on Gene Expression Phenotypes [My Copy] Science, Vol. 315, No. 5813. (9 February 2007), pp. 848-853. by Barbara E. Stranger, Matthew S. Forrest, Mark Dunning, et al.Catherine E. Ingle, Claude Beazley, Natalie Thorne, Richard Redon, Christine P. Bird, Anna de Grassi, Charles Lee, Chris Tyler-Smith, Nigel Carter, Stephen W. Scherer, Simon Tavare, Panagiotis Deloukas, Matthew E. Hurles, Emmanouil T. Dermitzakis posted by 38 people biovils lp2 daveGerrard sameersoi timhubbard Roswell Cancer Crosstalk Zephyrus ajbattle jonilaserson ilyashl emptyhb buyske zufar koller Visiting Position waszak daed psique jo_davies srp33 guhjy jfr dpollard balicea rdiaz qfwills djkt vplagnol shigepong jlangdon xingxu Bioinformatics EisenLab cisevol cis-regulatory-evolution caseybrown frohike jandot