Olivier Elemento's Top Recommendations

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	Exploration, normalization, and summaries of high density oligonucleotide array probe level data [My Copy] Biostat, Vol. 4, No. 2. (1 April 2003), pp. 249-264. by Rafael A. Irizarry, Bridget Hobbs, Francois Collin, et al.Yasmin D. Beazer-Barclay, Kristen J. Antonellis, Uwe Scherf, Terence P. Speed posted by 32 people jperkins VGreiff lwaldron shikin jfr YukaH huiminC robert85 emptyhb heliopais giovenko winterschlaefer miguel textoris Dax42 RMGraze fisherp tvdbulck dtc1 vpschulz rmk joepickrell ghattem bertelsen jo_davies MathBio Bioinformatics Computational_Systems_Biology Systems_Biology waszak bakakaj vertikalist
	Epigenomic Changes during Leukemia Cell Differentiation: Analysis of Histone Acetylation and Cytosine Methylation Using CpG Island Microarrays [My Copy] J Pharmacol Exp Ther, Vol. 311, No. 3. (1 December 2004), pp. 968-981. by M. Nouzova, N. Holtan, M. M. Oshiro, et al.R. B. Isett, J. L. Munoz-Rodriguez, A. F. List, M. L. Narro, S. J. Miller, N. C. Merchant, B. W. Futscher posted by 1 person huiminC
	Hypomethylation distinguishes genes of some human cancers from their normal counterparts [My Copy] Nature, Vol. 301, No. 5895. (6 January 1983), pp. 89-92. by Andrew P. Feinberg, Bert Vogelstein posted by 1 person huiminC
	DNA methylation and structural and functional bimodality of vertebrate promoters. [My Copy] Molecular biology and evolution, Vol. 25, No. 8. (August 2008), pp. 1602-1608. by N. Elango, S. V. Yi posted by 4 people huiminC aprasad djkt bpcusack
	Comparative analysis reveals signatures of differentiation amid genomic polymorphism in Lake Malawi cichlids [My Copy] Genome Biology, Vol. 9, No. 7. (10 July 2008), R113. by Yong H. Loh, Lee Katz, Meryl Mims, Thomas Kocher, Soojin Yi, J. Todd Streelman posted by 7 people lskatz druvus huiminC aprasad biomcgary Neeperando natstreet
	Nutritional Control of Reproductive Status in Honeybees via DNA Methylation [My Copy] Science, Vol. 319, No. 5871. (28 March 2008), pp. 1827-1830. by R. Kucharski, J. Maleszka, S. Foret, R. Maleszka posted by 12 people huiminC stevanspringer aprasad kengg djkt epigenetics aubinhon Integrative_biology_behavior faion kjglennie sunhwan stefanjanusz
	Comparative analysis of microarray normalization procedures: effects on reverse engineering gene networks. [My Copy] Bioinformatics (Oxford, England), Vol. 23, No. 13. (1 July 2007), pp. i282-288. by Wei Keat K. Lim, Kai Wang, Celine Lefebvre, Andrea Califano posted by 13 people jperkins jeremymiller lawraga bertelsen frohike huiminC dubhelix giovenko pengchy aramesh2 shigepong ghattem heliopais
	Discovery of novel epigenetic markers in non-Hodgkin's lymphoma [My Copy] Carcinogenesis, Vol. 28, No. 1. (January 2007), pp. 60-70. by Shi, Huidong, Guo, et al. Juyuan, Duff, J. Deiter, Rahmatpanah, Farahnaz, Chitima-Matsiga, Rebecca, Al-Kuhlani, Mufadhal, Taylor, H. Kristen, Sjahputera, Ozy, Andreski, Melinda, Wooldridge, E. James, Caldwell, W. Charles posted by 1 person huiminC
	Summaries of Affymetrix GeneChip probe level data [My Copy] Nucl. Acids Res., Vol. 31, No. 4. (15 February 2003), e15. by Rafael A. Irizarry, Benjamin M. Bolstad, Francois Collin, Leslie M. Cope, Bridget Hobbs, Terence P. Speed posted by 18 people jperkins daforerog lwaldron shikin dswan huiminC pcahan1 RMGraze aviad_work vplagnol ghattem talponer heliopais wirawan waszak rschulz bertelsen srp33
	A comparison of normalization methods for high density oligonucleotide array data based on variance and bias. [My Copy] Bioinformatics (Oxford, England), Vol. 19, No. 2. (22 January 2003), pp. 185-193. by B. M. Bolstad, R. A. Irizarry, M. Astrand, T. P. Speed posted by 23 people jperkins vplagnol brianb neils ipark-kaist shikin michaelbarton emptyhb noushin huiminC cassj Dax42 pcahan1 chad_davis RMGraze gjuggler filmsternchen qmwwallace joepickrell ghattem bertelsen vertikalist GeeSharpMinor
	The cancer genome [My Copy] Nature, Vol. 458, No. 7239. (9 April 2009), pp. 719-724. by Michael R. Stratton, Peter J. Campbell, P. Andrew Futreal posted by 14 people aviad_work jfr suizifish guhjy jessopher ilyashl frohike pkonings reyez Roswell Cancer Crosstalk Zephyrus rdiaz renatomilani kristen
	Cepred: Predicting the Co-Expression Patterns of the Human Intronic microRNAs with Their Host Genes [My Copy] PLoS ONE, Vol. 4, No. 2. (10 February 2009), e4421. by Dong Wang, Ming Lu, Jing Miao, Tingting Li, Edwin Wang, Qinghua Cui posted by 11 people Garamonfok guhjy suizifish jfr microRNA heliopais ealloza samgj pengchy daforerog mhamada
	The human colon cancer methylome shows similar hypo- and hypermethylation at conserved tissue-specific CpG island shores [My Copy] Nat Genet, Vol. 41, No. 2. (18 February 2009), pp. 178-186. by Rafael A. Irizarry, Christine Ladd-Acosta, Bo Wen, et al.Zhijin Wu, Carolina Montano, Patrick Onyango, Hengmi Cui, Kevin Gabo, Michael Rongione, Maree Webster, Hong Ji, James B. Potash, Sarven Sabunciyan, Andrew P. Feinberg posted by 6 people saravana jfr suizifish felsani wpuszyk misonneh
	An Analysis of Human MicroRNA and Disease Associations [My Copy] PLoS ONE, Vol. 3, No. 10. (15 October 2008), e3420. by Ming Lu, Qipeng Zhang, Min Deng, et al.Jing Miao, Yanhong Guo, Wei Gao, Qinghua Cui posted by 7 people suizifish daforerog qfwills microRNA jfr ealloza pengchy
	Integrative analysis reveals the direct and indirect interactions between DNA copy number aberrations and gene expression changes [My Copy] Bioinformatics, Vol. 24, No. 7. (1 April 2008), pp. 889-896. by Hyunju Lee, Sek W. Kong, Peter J. Park posted by 10 people yina rdiaz Zephyrus jfr jcaddy ealloza barriot ptrobajo frohike srp33
	Developmental programming of CpG island methylation profiles in the human genome [My Copy] Nat Struct Mol Biol, Vol. 16, No. 5. (19 May 2009), pp. 564-571. by Ravid Straussman, Deborah Nejman, Douglas Roberts, et al.Israel Steinfeld, Barak Blum, Nissim Benvenisty, Itamar Simon, Zohar Yakhini, Howard Cedar posted by 1 person suizifish
	Computational epigenetics [My Copy] Bioinformatics, Vol. 24, No. 1. (1 January 2008), pp. 1-10. by Christoph Bock, Thomas Lengauer posted by 20 people operon iris42 pawelsobko SIMR bioinformatics huali suizifish mmartin sebastien_vigneau ealloza djkt frohike timflutre cjeans epigenetics cabbagezs Bioinformatics barriot Ema Thomasah guhjy
	DNA methylation profiling of human chromosomes 6, 20 and 22. [My Copy] Nat Genet (29 October 2006) by Florian Eckhardt, Joern Lewin, Rene Cortese, et al.Vardhman K K. Rakyan, John Attwood, Matthias Burger, John Burton, Tony V V. Cox, Rob Davies, Thomas A A. Down, Carolina Haefliger, Roger Horton, Kevin Howe, David K K. Jackson, Jan Kunde, Christoph Koenig, Jennifer Liddle, David Niblett, Thomas Otto, Roger Pettett, Stefanie Seemann, Christian Thompson, Tony West, Jane Rogers, Alex Olek, Kurt Berlin, Stephan Beck posted by 5 people suizifish plofje shigepong epigenetics jo_davies
	Computational prediction of methylation status in human genomic sequences [My Copy] Proceedings of the National Academy of Sciences, Vol. 103, No. 28. (11 July 2006), pp. 10713-10716. by Rajdeep Das, Nevenka Dimitrova, Zhenyu Xuan, et al.Robert A. Rollins, Fatemah Haghighi, John R. Edwards, Jingyue Ju, Timothy H. Bestor, Michael Q. Zhang posted by 5 people iris42 suizifish eckart_bindewald olympos epigenetics
	Predicting methylation status of CpG islands in the human brain [My Copy] Bioinformatics, Vol. 22, No. 18. (15 September 2006), pp. 2204-2209. by Fang Fang, Shicai Fan, Xuegong Zhang, Michael Q. Zhang posted by 3 people iris42 suizifish kaarsinogen
	DNA Methylation Profiling of the Human Major Histocompatibility Complex: A Pilot Study for the Human Epigenome Project [My Copy] PLoS Biol, Vol. 2, No. 12. (23 November 2004), e405. by Vardhman K. Rakyan, Thomas Hildmann, Karen L. Novik, et al.Jörn Lewin, Jörg Tost, Antony V. Cox, T. Dan Andrews, Kevin L. Howe, Thomas Otto, Alexander Olek, Judith Fischer, Ivo G. Gut, Kurt Berlin, Stephan Beck posted by 7 people jmstat suizifish misonneh mc_hamming kaarsinogen tuck balicea
	The UCSC Cancer Genomics Browser. [My Copy] Nature methods, Vol. 6, No. 4. (April 2009), pp. 239-240. by Jingchun Zhu, J. Zachary Sanborn, Stephen Benz, et al.Christopher Szeto, Fan Hsu, Robert M. Kuhn, Donna Karolchik, John Archie, Marc E. Lenburg, Laura J. Esserman, W. James Kent, David Haussler, Ting Wang posted by 4 people jfr guhjy chrisamiller neils
	BioconductorBuntu - A Linux Distribution that Implements a Web-Based DNA Microarray Analysis Server [My Copy] Bioinformatics (23 March 2009), btp165. by Paul Geeleher, Dermot Morris, John P. Hinde, Aaron Golden posted by 10 people jfr guhjy Bioinformatics dswan djkt chrisamiller renatomilani phoenixzxl natstreet druvus
	KEGGgraph: a graph approach to KEGG PATHWAY in R and bioconductor. [My Copy] Bioinformatics (Oxford, England), Vol. 25, No. 11. (1 June 2009), pp. 1470-1471. by Jitao David D. Zhang, Stefan Wiemann posted by 17 people jfr Thaverkamp daforerog Vincent_Rouilly kiara coela guhjy dolchan neils VGreiff nuin chrisamiller renatomilani jmeppley natstreet phoenixzxl druvus
	Genome-wide functional synergy between amplified and mutated genes in human breast cancer. [My Copy] Cancer research, Vol. 68, No. 22. (15 November 2008), pp. 9532-9540. by Y. Nikolsky, E. Sviridov, J. Yao, et al.D. Dosymbekov, V. Ustyansky, V. Kaznacheev, Z. Dezso, L. Mulvey, L. E. Macconaill, W. Winckler, T. Serebryiskaya, T. Nikolskaya, K. Polyak posted by 7 people GeneGo shikin jfr ipark-kaist chrisamiller Breast Cancer Reading Club Zephyrus
	R/parallel - speeding up bioinformatics analysis with R [My Copy] BMC Bioinformatics, Vol. 9, No. 1. (22 September 2008), 390. by Gonzalo Vera, Ritsert Jansen, Remo Suppi posted by 28 people Zephyrus daveGerrard sotacam cassj walshtp dposada jfr Yanno siebert operon talponer guhjy dakelley chad_davis ptrobajo pengchy shikin robertlischke chrisamiller BergmanLab cisevol druvus renatomilani rdiaz nuin GeeSharpMinor neils jandot
	What are decision trees? [My Copy] Nature biotechnology, Vol. 26, No. 9. (September 2008), pp. 1011-1013. by Carl Kingsford, Steven L. Salzberg posted by 22 people guhjy megraw jwhitney daforerog svozil Yanno logics of knowledge A_Olympia jfr yzlab ptrobajo chrisamiller markusd druvus Roswell Cancer Crosstalk Zephyrus brianb dullhunk sjcockell zwang GeeSharpMinor neils
	Why Do Hubs in the Yeast Protein Interaction Network Tend To Be Essential: Reexamining the Connection between the Network Topology and Essentiality [My Copy] PLoS Comput Biol, Vol. 4, No. 8. (1 August 2008), e1000140. by Elena Zotenko, Julian Mestre, Dianne P. O'Leary, Teresa M. Przytycka posted by 14 people lawraga marti chrisamiller kaarsinogen jfr aramata jmjimenez srp33 maralena cabbagesofdoom shikin GeneGo cerca tmmurali
	Microarray data mining: A novel optimization-based approach to uncover biologically coherent structures [My Copy] BMC Bioinformatics, Vol. 9, No. 1. (2008) by Meng Tan, Erin Smith, James Broach, Christodoulos Floudas posted by 6 people carlk cswinburne jfr GeeSharpMinor chrisamiller guhjy
	Identification of somatically acquired rearrangements in cancer using genome-wide massively parallel paired-end sequencing. [My Copy] Nature genetics, Vol. 40, No. 6. (27 June 2008), pp. 722-729. by Peter J. Campbell, Philip J. Stephens, Erin D. Pleasance, et al.Sarah O'Meara, Heng Li, Thomas Santarius, Lucy A. Stebbings, Catherine Leroy, Sarah Edkins, Claire Hardy, Jon W. Teague, Andrew Menzies, Ian Goodhead, Daniel J. Turner, Christopher M. Clee, Michael A. Quail, Antony Cox, Clive Brown, Richard Durbin, Matthew E. Hurles, Paul A. Edwards, Graham R. Bignell, Michael R. Stratton, P. Andrew Futreal posted by 13 people chvlyl dakelley APRegier myzhang jessopher frohike smiddha xingxu daed matthewsuderman jfr caseybrown chrisamiller
	Comprehensive analysis of affymetrix exon arrays using BioConductor. [My Copy] PLoS computational biology, Vol. 4, No. 2. (February 2008) by M. J. Okoniewski, C. J. Miller posted by 8 people daveGerrard floatingpoint guhjy neils giovenko jfr chrisamiller eskay
	Mapping and sequencing of structural variation from eight human genomes [My Copy] Nature, Vol. 453, No. 7191. (01 May 2008), pp. 56-64. by Jeffrey M. Kidd, Gregory M. Cooper, William F. Donahue, et al.Hillary S. Hayden, Nick Sampas, Tina Graves, Nancy Hansen, Brian Teague, Can Alkan, Francesca Antonacci, Eric Haugen, Troy Zerr, N. Alice Yamada, Peter Tsang, Tera L. Newman, Eray Tuzun, Ze Cheng, Heather M. Ebling, Nadeem Tusneem, Robert David, Will Gillett, Karen A. Phelps, Molly Weaver, David Saranga, Adrianne Brand, Wei Tao, Erik Gustafson, Kevin McKernan, Lin Chen, Maika Malig, Joshua D. Smith, Joshua M. Korn, Steven A. McCarroll, David A. Altshuler, Daniel A. Peiffer, Michael Dorschner, John Stamatoyannopoulos, David Schwartz, Deborah A. Nickerson, James C. Mullikin, Richard K. Wilson, Laurakay Bruhn, Maynard V. Olson, Rajinder Kaul, Douglas R. Smith, Evan E. Eichler posted by 38 people hzoltan n00c daed fstrozzi sameersoi jonilaserson ilyashl rdiaz dakelley xingxu alweber APRegier Annab smiddha daforerog vkwn frohike waszak matthewsuderman jfr hpaces Ema bpb dchughes djkt balicea shikin GeneGo psique kintoki kaniko aprasad vplagnol maximilianh chrisamiller guhjy skoch3 Koch_Lab
	Variations in DNA elucidate molecular networks that cause disease. [My Copy] Nature, Vol. 452, No. 7186. (27 March 2008), pp. 429-435. by Yanqing Chen, Jun Zhu, Pek Yee Y. Lum, et al.Xia Yang, Shirly Pinto, Douglas J. MacNeil, Chunsheng Zhang, John Lamb, Stephen Edwards, Solveig K. Sieberts, Amy Leonardson, Lawrence W. Castellini, Susanna Wang, Marie-France F. Champy, Bin Zhang, Valur Emilsson, Sudheer Doss, Anatole Ghazalpour, Steve Horvath, Thomas A. Drake, Aldons J. Lusis, Eric E. Schadt posted by 25 people mnishimu Zephyrus biomcgary daforerog roys druvus 4th_floor_JC nicklynch semrich brianb jbsaltz djkt raiyar lp2 jo_davies shikin caseybrown GeneGo ptrobajo guhjy echinotrix natstreet sanchezbuelna jfr chrisamiller
	Merging microarray data from separate breast cancer studies provides a robust prognostic test [My Copy] BMC Bioinformatics, Vol. 9, No. 1. (27 February 2008), 125. by Lei Xu, Aik Tan, Raimond Winslow, Donald Geman posted by 7 people daforerog Zephyrus laral frohike jfr shigepong chrisamiller
	High expression of lymphocyte-associated genes in node-negative HER2+ breast cancers correlates with lower recurrence rates. [My Copy] Cancer Res, Vol. 67, No. 22. (15 November 2007), pp. 10669-10676. by G. Alexe, G. S. Dalgin, D. Scanfeld, et al.P. Tamayo, J. P. Mesirov, C. DeLisi, L. Harris, N. Barnard, M. Martel, A. J. Levine, S. Ganesan, G. Bhanot posted by 3 people jfr chrisamiller aviad_work
	A multidimensional analysis of genes mutated in breast and colorectal cancers [My Copy] Genome Res. (10 August 2007), gr.6431107. by Jimmy Lin, Christine M. Gan, Xiaosong Zhang, et al.Sian Jones, Tobias Sjoblom, Laura D. Wood, Williams D. Parsons, Nickolas Papadopoulos, Kenneth W. Kinzler, Bert Vogelstein, Giovanni Parmigiani, Victor E. Velculescu posted by 4 people chrisamiller jfr cerami xingxu
	Network modeling links breast cancer susceptibility and centrosome dysfunction [My Copy] Nature Genetics, Vol. 39, No. 11. (07 October 2007), pp. 1338-1349. by Miguel A. Pujana, Jing-Dong J. Han, Lea M. Starita, et al.Kristen N. Stevens, Muneesh Tewari, Jin S. Ahn, Gad Rennert, Victor Moreno, Tomas Kirchhoff, Bert Gold, Volker Assmann, Wael M. ElShamy, Jean-Francois Rual, Douglas Levine, Laura S. Rozek, Rebecca S. Gelman, Kristin C. Gunsalus, Roger A. Greenberg, Bijan Sobhian, Nicolas Bertin, Kavitha Venkatesan, Nono Ayivi-Guedehoussou, Xavier Sole, Pilar Hernandez, Conxi Lazaro, Katherine L. Nathanson, Barbara L. Weber, Michael E. Cusick, David E. Hill, Kenneth Offit, David M. Livingston, Stephen B. Gruber, Jeffrey D. Parvin, Marc Vidal posted by 13 people tonamswish ajbattle jaimie koller jmuhlich jfr ealloza cjeans nedwards BioinfoCIPF jdiezperezj phoenixzxl chrisamiller
	High-resolution array-CGH and expression profiling identifies a novel genomic subtype of ER negative breast cancer [My Copy] Genome Biology, Vol. 8 (09 October 2007), R215. by Suet F. Chin, Andrew E. Teschendorff, John C. Marioni, et al.Yanzhong Wang, Nuno L. Barbosa-Morais, Natalie P. Thorne, Jose L. Costa, Sarah E. Pinder, Mark A. van de Wiel, Andrew R. Green, Ian O. Ellis, Peggy L. Porter, Simon Tavare, James D. Brenton, Bauke Ylstra, Carlos Caldas posted by 4 people frohike jfr rdiaz chrisamiller
	PADGE: analysis of heterogeneous patterns of differential gene expression. [My Copy] Physiological genomics, Vol. 32, No. 1. (19 December 2007), pp. 154-159. by Li Li, Amitabha Chaudhuri, John Chant, Zhijun Tang posted by 3 people jfr guhjy chrisamiller
	Novel patterns of genome rearrangement and their association with survival in breast cancer. [My Copy] Genome Res, Vol. 16, No. 12. (December 2006), pp. 1465-1479. by J. Hicks, A. Krasnitz, B. Lakshmi, et al.N. E. Navin, M. Riggs, E. Leibu, D. Esposito, J. Alexander, J. Troge, V. Grubor, S. Yoon, M. Wigler, K. Ye, A. L. Børresen-Dale, B. Naume, E. Schlicting, L. Norton, T. Hägerström, L. Skoog, G. Auer, S. Månér, P. Lundin, A. Zetterberg posted by 3 people jfr cerami chrisamiller
	GO PaD: the Gene Ontology Partition Database. [My Copy] Nucleic Acids Res, Vol. 35, No. Database issue. (January 2007) by G. Alterovitz, M. Xiang, M. Mohan, M. F. Ramoni posted by 4 people hollandorange jfr macavity1g chrisamiller
	Integrated array-comparative genomic hybridization and expression array profiles identify clinically relevant molecular subtypes of glioblastoma. [My Copy] Cancer research, Vol. 65, No. 5. (1 March 2005), pp. 1678-1686. by Janice M. Nigro, Anjan Misra, Li Zhang, et al.Ivan Smirnov, Howard Colman, Chandi Griffin, Natalie Ozburn, Mingang Chen, Edward Pan, Dimpy Koul, Alfred K. Yung, Burt G. Feuerstein, Kenneth D. Aldape posted by 5 people aezrin srp33 chrisamiller jfr bioguru2000
	The Consensus Coding Sequences of Human Breast and Colorectal Cancers [My Copy] Science (7 September 2006), 1133427. by Tobias Sjoblom, Sian Jones, Laura D. Wood, et al.Williams D. Parsons, Jimmy Lin, Thomas Barber, Diana Mandelker, Rebecca J. Leary, Janine Ptak, Natalie Silliman, Steve Szabo, Phillip Buckhaults, Christopher Farrell, Paul Meeh, Sanford D. Markowitz, Joseph Willis, Dawn Dawson, James K. Willson, Adi F. Gazdar, James Hartigan, Leo Wu, Changsheng Liu, Giovanni Parmigiani, Ben H. Park, Kurtis E. Bachman, Nickolas Papadopoulos, Bert Vogelstein, Kenneth W. Kinzler, Victor E. Velculescu posted by 24 people backlin alessandrobrozzi wimufi aalibes bicko jfr tuck balajis nickluscombe rdiaz eisei jackjackjjj vicsta jtaylor emb51 ramensky massivemayhem cerami xingxu EBI-regulation mingzhi chrisamiller frohike gwenknight
	Breast tumor copy number aberration phenotypes and genomic instability. [My Copy] BMC Cancer, Vol. 6 (2006) by J. Fridlyand, A. M. Snijders, B. Ylstra, et al.H. Li, A. Olshen, R. Segraves, S. Dairkee, T. Tokuyasu, B. M. Ljung, A. N. Jain, J. McLennan, J. Ziegler, K. Chin, S. Devries, H. Feiler, J. W. Gray, F. Waldman, D. Pinkel, D. G. Albertson posted by 5 people jfr rdiaz Garamonfok frohike chrisamiller
	Gene set enrichment analysis: A knowledge-based approach for interpreting genome-wide expression profiles [My Copy] Proceedings of the National Academy of Sciences of the United States of America, Vol. 102, No. 43. (25 October 2005), pp. 15545-15550. by Aravind Subramanian, Pablo Tamayo, Vamsi K. Mootha, et al.Sayan Mukherjee, Benjamin L. Ebert, Michael A. Gillette, Amanda Paulovich, Scott L. Pomeroy, Todd R. Golub, Eric S. Lander, Jill P. Mesirov posted by 50 people gbloeb miskar giovenko greg dolchan pattersonee mhamidi jperkins zufar ptrobajo antonkratz yaredo tmmurali VGreiff daforerog paszkows ipark-kaist bertelsen ajbattle jessopher askrajiv idonaldson ihpark chrisamiller dragonrez jfr balajis maryee xwbcn hpiwowar aviad_work ealloza jdiggans jeremymiller frohike hawkeyehammer schuylrp natstreet Bioinformatics BioinfoCIPF GeschwindLab Indigene heliopais shikin waghsk roys ellakat srp33 sgoetz AbnerCYH
	A review of feature selection techniques in bioinformatics [My Copy] Bioinformatics, Vol. 23, No. 19. (1 October 2007), pp. 2507-2517. by Yvan Saeys, Inaki Inza, Pedro Larranaga posted by 29 people Shibby zufar stharward jjrodriguez briordan phoenixzxl ipark-kaist prerna svozil bertelsen VGreiff rsantana druvus jfr giovenko guhjy chad_davis aviad_work frohike grahamc shigepong lp2 cabbagezs ryanraaum Bioinformatics vietanh0 eacosta aaalxy srp33
	CpG island methylation pattern in different human tissues and its correlation with gene expression [My Copy] Biochemical and Biophysical Research Communications, Vol. 383, No. 4. (12 June 2009), pp. 421-425. by Shicai Fan, Xuegong Zhang posted by 1 person suizifish
	Crucial Roles of Sp1 and Epigenetic Modifications in the Regulation of the CLDN4 Promoter in Ovarian Cancer Cells [My Copy] J. Biol. Chem., Vol. 281, No. 30. (28 July 2006), pp. 21433-21444. by Hiroshi Honda, Michael J. Pazin, Hongxiu Ji, Roman P. Wernyj, Patrice J. Morin posted by 1 person suizifish
	Two Sp1/Sp3 Binding Sites in the Major Immediate-Early Proximal Enhancer of Human Cytomegalovirus Have a Significant Role in Viral Replication [My Copy] J. Virol., Vol. 79, No. 15. (1 August 2005), pp. 9597-9607. by Hiroki Isomura, Mark F. Stinski, Ayumi Kudoh, Tohru Daikoku, Noriko Shirata, Tatsuya Tsurumi posted by 1 person suizifish
	An Sp1-binding Silencer Element Is a Critical Negative Regulator of the Megakaryocyte-specific alpha IIb Gene [My Copy] J. Biol. Chem., Vol. 273, No. 10. (6 March 1998), pp. 5716-5726. by Yaping Shou, Shira Baron, Mortimer Poncz posted by 1 person suizifish
	The binding of the ubiquitous transcription factor Sp1 at the locus control region represses the expression of β-like globin genes [My Copy] Proceedings of the National Academy of Sciences of the United States of America, Vol. 102, No. 28. (12 July 2005), pp. 9896-9900. by Dongxiao Feng, Yuet W. Kan posted by 1 person suizifish
	Effects of methylation of non-CpG sequence in the promoter region on the expression of human synaptotagmin XI (syt11) [My Copy] Gene, Vol. 348 (28 March 2005), pp. 123-134. by Shinichi Inoue, Michio Oishi posted by 1 person suizifish
	The Sp-family of transcription factors [My Copy] Gene, Vol. 238, No. 2. (1 October 1999), pp. 291-300. by G. Suske posted by 1 person suizifish
	Putative Zinc Finger Protein Binding Sites Are Over-Represented in the Boundaries of Methylation-Resistant CpG Islands in the Human Genome [My Copy] PLoS ONE, Vol. 2, No. 11. (21 November 2007), e1184. by Shicai Fan, Fang Fang, Xuegong Zhang, Michael Q. Zhang posted by 1 person suizifish
	MEME SUITE: tools for motif discovery and searching [My Copy] Nucl. Acids Res., Vol. 37, No. suppl_2. (1 July 2009), pp. W202-208. by Timothy L. Bailey, Mikael Boden, Fabian A. Buske, et al.Martin Frith, Charles E. Grant, Luca Clementi, Jingyuan Ren, Wilfred W. Li, William S. Noble posted by 7 people suizifish jlike maximilianh natstreet idonaldson nuin cassj
	Hierarchical Clustering of Lung Cancer Cell Lines Using DNA Methylation Markers [My Copy] Cancer Epidemiol Biomarkers Prev, Vol. 11, No. 3. (1 March 2002), pp. 291-297. by Arvind K. Virmani, Jeffrey A. Tsou, Kimberly D. Siegmund, et al.Linda Y. Shen, Tiffany I. Long, Peter W. Laird, Adi F. Gazdar, Ite A. Laird-Offringa posted by 1 person suizifish
	LZAP, a Putative Tumor Suppressor, Selectively Inhibits NF-ºB [My Copy] Vol. 12, No. 3. (11 September 2007), pp. 239-251. by Jialiang Wang, Hanbing An, Marty W. Mayo, Albert S. Baldwin, Wendell G. Yarbrough posted by 1 person suizifish
	Identification and characterization of MARVELD1, a novel nuclear protein that is down-regulated in multiple cancers and silenced by DNA methylation [My Copy] Cancer Letters (11 April 2009) by Shan Wang, Yu Li, Fang Han, et al.Jianran Hu, Lei Yue, Youtao Yu, Yubao Zhang, Jie He, Hongxia Zheng, Shuliang Shi posted by 1 person suizifish
	CpG islands – ‘A rough guide’ [My Copy] FEBS Letters, Vol. 583, No. 11. (05 June 2009), pp. 1713-1720. by R. Illingworth posted by 3 people aprickett iris42 rschulz
	Transcriptional regulatory elements in the human genome. [My Copy] Annual review of genomics and human genetics, Vol. 7 (2006), pp. 29-59. by G. A. Maston, S. K. Evans, M. R. Green posted by 4 people suizifish gderwin maximilianh wowalz
	It Takes a PHD to Read the Histone Code [My Copy] Vol. 126, No. 1. (14 July 2006), pp. 22-24. by Jane Mellor posted by 1 person suizifish
	Genetic control of X chromosome inactivation in mice: definition of the Xce candidate interval. [My Copy] Genetics, Vol. 173, No. 4. (August 2006), pp. 2103-2110. by L. H. Chadwick, L. M. Pertz, K. W. Broman, M. S. Bartolomei, H. F. Willard posted by 1 person suizifish
	A skewed view of X chromosome inactivation. [My Copy] The Journal of clinical investigation, Vol. 118, No. 1. (January 2008), pp. 20-23. by J. Minks, W. P. Robinson, C. J. Brown posted by 1 person suizifish
	Chromatin remodeling and cancer, part II: ATP-dependent chromatin remodeling [My Copy] Trends in Molecular Medicine, Vol. 13, No. 9. (September 2007), pp. 373-380. by G. Wang, C. Allis, P. Chi posted by 1 person suizifish
	Polycomb/Trithorax response elements and epigenetic memory of cell identity [My Copy] Development, Vol. 134, No. 2. (15 January 2007), pp. 223-232. by Leonie Ringrose, Renato Paro posted by 1 person suizifish
	Chromatin remodeling and cancer, part I: covalent histone modifications [My Copy] Trends in Molecular Medicine, Vol. 13, No. 9. (September 2007), pp. 363-372. by G. Wang, C. Allis, P. Chi posted by 1 person suizifish
	Histone arginine methylation and its dynamic regulation. [My Copy] Frontiers in bioscience : a journal and virtual library, Vol. 11 (2006), pp. 344-355. by Joanna Wysocka, C. David Allis, Scott Coonrod posted by 2 people carlosjavierna suizifish
	Expression profile and transcription factor binding site exploration of imprinted genes in human and mouse. [My Copy] BMC genomics, Vol. 10 (31 March 2009), 144. by C. Steinhoff, M. Paulsen, S. Kielbasa, J. Walter, M. Vingron posted by 2 people suizifish reyez
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	Protease degradomics: mass spectrometry discovery of protease substrates and the CLIP-CHIP, a dedicated DNA microarray of all human proteases and inhibitors. [My Copy] Biological chemistry, Vol. 385, No. 6. (June 2004), pp. 493-504. by C. M. Overall, E. M. Tam, R. Kappelhoff, et al.A. Connor, T. Ewart, C. J. Morrison, X. Puente, C. López-Otín, A. Seth posted by 1 person suizifish
	Histone modifications at human enhancers reflect global cell-type-specific gene expression. [My Copy] Nature, Vol. 459, No. 7243. (7 May 2009), pp. 108-112. by Nathaniel D. Heintzman, Gary C. Hon, R. David Hawkins, et al.Pouya Kheradpour, Alexander Stark, Lindsey F. Harp, Zhen Ye, Leonard K. Lee, Rhona K. Stuart, Christina W. Ching, Keith A. Ching, Jessica E. Antosiewicz-Bourget, Hui Liu, Xinmin Zhang, Roland D. Green, Victor V. Lobanenkov, Ron Stewart, James A. Thomson, Gregory E. Crawford, Manolis Kellis, Bing Ren posted by 18 people suizifish RyuOgawa inesdesantiago gdb djkt tonamswish t08681mn akundaje leliavski scjparker fenghezi TRHvidsten humburg frohike idonaldson Epigenetics CTCF sebastien_vigneau
	Altered methylation patterns in cancer cell genomes: Cause or consequence? [My Copy] Cancer Cell, Vol. 1, No. 4. (May 2002), pp. 299-305. by S. Baylin posted by 2 people le-gal suizifish
	PRMT5-mediated methylation of histone H4R3 recruits DNMT3A, coupling histone and DNA methylation in gene silencing [My Copy] Nat Struct Mol Biol, Vol. 16, No. 3. (March 2009), pp. 304-311. by Quan Zhao, Gerhard Rank, Yuen T. Tan, et al.Haitao Li, Robert L. Moritz, Richard J. Simpson, Loretta Cerruti, David J. Curtis, Dinshaw J. Patel, C. David Allis, John M. Cunningham, Stephen M. Jane posted by 3 people ashkelon13 suizifish rjlawren
	DNA methylation profiles in monozygotic and dizygotic twins [My Copy] Nat Genet, Vol. 41, No. 2. (18 January 2009), pp. 240-245. by Zachary A. Kaminsky, Thomas Tang, Sun-Chong Wang, et al.Carolyn Ptak, Gabriel H. T. Oh, Albert H. C. Wong, Laura A. Feldcamp, Carl Virtanen, Jonas Halfvarson, Curt Tysk, Allan F. McRae, Peter M. Visscher, Grant W. Montgomery, Irving I. Gottesman, Nicholas G. Martin, Art Petronis posted by 11 people sf11 marywaye fenghezi jakekei suizifish felsani clearbluespring Zephyrus Roswell Cancer Crosstalk misonneh djkt
	Contribution of sialidase NEU1 to suppression of metastasis of human colon cancer cells through desialylation of integrin ²4 [My Copy] Oncogene, Vol. aop, No. current. by T. Uemura, K. Shiozaki, K. Yamaguchi, et al.S. Miyazaki, S. Satomi, K. Kato, H. Sakuraba, T. Miyagi posted by 1 person suizifish
	Quantitative DNA methylation analysis based on four-dye trace data from direct sequencing of PCR amplificates [My Copy] Bioinformatics, Vol. 20, No. 17. (22 November 2004), pp. 3005-3012. by Jorn Lewin, Armin O. Schmitt, Peter Adorjan, Thomas Hildmann, Christian Piepenbrock
	The DNA-encoded nucleosome organization of a eukaryotic genome. [My Copy] Nature, Vol. 458, No. 7236. (19 March 2009), pp. 362-366. by Noam Kaplan, Irene K. Moore, Yvonne Fondufe-Mittendorf, et al.Andrea J. Gossett, Desiree Tillo, Yair Field, Emily M. LeProust, Timothy R. Hughes, Jason D. Lieb, Jonathan Widom, Eran Segal posted by 12 people clearbluespring suizifish inesdesantiago gdb kshundyak absterga rschulz Koch_Lab skoch3 WanderingAengus dchughes maximilianh
	PcG Proteins, DNA Methylation, and Gene Repression by Chromatin Looping [My Copy] PLoS Biol, Vol. 6, No. 12. (2 December 2008), e306. by Vijay K. Tiwari, Kelly M. Mcgarvey, Julien D. F. Licchesi, et al.Joyce E. Ohm, James G. Herman, Dirk Schübeler, Stephen B. Baylin posted by 6 people gdb suizifish rjlawren inesdesantiago kengg clearbluespring
	Tumour cell survival signalling by the ERK1/2 pathway. [My Copy] Cell death and differentiation, Vol. 16, No. 3. (March 2009), pp. 368-377. by K. Balmanno, S. J. Cook posted by 2 people guhjy suizifish
	VOMBAT: prediction of transcription factor binding sites using variable order Bayesian trees. [My Copy] Nucleic acids research, Vol. 34, No. Web Server issue. (1 July 2006) by J. Grau, I. Ben-Gal, S. Posch, I. Grosse posted by 2 people suizifish mgledi
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	Epigenetic inheritance of cell differentiation status. [My Copy] Cell cycle (Georgetown, Tex.), Vol. 7, No. 9. (May 2008), pp. 1173-1177. by R. K. Ng, J. B. Gurdon posted by 2 people suizifish MSchipper
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	Genomic DNA methylation: the mark and its mediators [My Copy] Trends in Biochemical Sciences, Vol. 31, No. 2. (February 2006), pp. 89-97. by R. Klose, A. Bird posted by 3 people jmstat suizifish Pezda
	Intersection of the RNA interference and X-inactivation pathways. [My Copy] Science (New York, N.Y.), Vol. 320, No. 5881. (6 June 2008), pp. 1336-1341. by Y. Ogawa, B. K. Sun, J. T. Lee posted by 3 people suizifish sebastien_vigneau X-chromosome inactivation
	Inferring causal relationships among different histone modifications and gene expression [My Copy] Genome Research, Vol. 18, No. 8. (18 August 2008), pp. 1314-1324. by Hong Yu, Shanshan Zhu, Bing Zhou, Huiling Xue, Jing-Dong J. Han posted by 11 people daveGerrard mingzhi suizifish felsani fpattyn rschulz ptrobajo bootsy bcondon sharmapank klo
	Associating transcription factor-binding site motifs with target GO terms and target genes [My Copy] Nucl. Acids Res. (10 June 2008), gkn374. by Mikael Boden, Timothy L. Bailey posted by 6 people suizifish aramesh2 mikaelboden maximilianh guhjy dgroth
	Epigenetic mechanisms of gene regulation during mammalian spermatogenesis. [My Copy] Epigenetics : official journal of the DNA Methylation Society, Vol. 3, No. 1. (b 2008), pp. 21-28. by A. Khalil, C. Wahlestedt posted by 3 people suizifish stefanjanusz altotor
	Mechanisms regulating imprinted genes in clusters [My Copy] Current Opinion in Cell Biology, Vol. 19, No. 3. (June 2007), pp. 281-289. by C. Edwards, A. Fergusonsmith posted by 4 people aprickett suizifish coela sebastien_vigneau
	Epigenetics in cancer. [My Copy] N Engl J Med, Vol. 358, No. 11. (13 March 2008), pp. 1148-1159. by M. Esteller posted by 6 people tonamswish suizifish srp33 guhjy frohike Bioinformatics
	From The Cover: Epigenetic differences arise during the lifetime of monozygotic twins [My Copy] Proceedings of the National Academy of Sciences, Vol. 102, No. 30. (26 July 2005), pp. 10604-10609. by Mario F. Fraga, Esteban Ballestar, Maria F. Paz, et al.Santiago Ropero, Fernando Setien, Maria L. Ballestar, Damia Heine-Suner, Juan C. Cigudosa, Miguel Urioste, Javier Benitez, Manuel Boix-Chornet, Abel Sanchez-Aguilera, Charlotte Ling, Emma Carlsson, Pernille Poulsen, Allan Vaag, Zarko Stephan, Tim D. Spector, Yue-Zhong Wu, Christoph Plass, Manel Esteller posted by 4 people suizifish misonneh inesdesantiago fridjians32citations
	Genome regulation by polycomb and trithorax proteins. [My Copy] Cell, Vol. 128, No. 4. (23 February 2007), pp. 735-745. by Bernd Schuettengruber, Daniel Chourrout, Michel Vervoort, Benjamin Leblanc, Giacomo Cavalli posted by 4 people hkuhn kmbernt suizifish inesdesantiago
	Heterochromatin and RNAi are required to establish CENP-A chromatin at centromeres. [My Copy] Science, Vol. 319, No. 5859. (4 January 2008), pp. 94-97. by H. D. Folco, A. L. Pidoux, T. Urano, R. C. Allshire posted by 3 people suizifish sebastien_vigneau SciNika
	Genome-wide profiling of DNA methylation reveals a class of normally methylated CpG island promoters. [My Copy] PLoS Genet, Vol. 3, No. 10. (26 October 2007), pp. 2023-2036. by L. Shen, Y. Kondo, Y. Guo, et al.J. Zhang, L. Zhang, S. Ahmed, J. Shu, X. Chen, R. A. Waterland, J. P. Issa posted by 4 people iris42 suizifish sebastien_vigneau zwang
	Chromatin Modifications and Their Function [My Copy] Cell, Vol. 128, No. 4. (23 February 2007), pp. 693-705. by T. Kouzarides posted by 7 people galka8_diploma gderwin suizifish shazos MSchipper zhlei guhjy
	OSCAR: One-class SVM for Accurate Recognition of Cis-elements [My Copy] Bioinformatics (5 October 2007), btm473. by Bo Jiang, Michael Q. Zhang, Xuegong Zhang posted by 8 people suizifish cassj tmmurali chad_davis cabbagezs maximilianh idonaldson isimpson
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	Analysis of the Vertebrate Insulator Protein CTCF-Binding Sites in the Human Genome [My Copy] Cell, Vol. 128, No. 6. (23 March 2007), pp. 1231-1245. by T. Kim, Z. Abdullaev, A. Smith, et al.K. Ching, D. Loukinov, R. Green, M. Zhang, V. Lobanenkov, B. Ren posted by 7 people lusk suizifish clearbluespring caseybrown sebastien_vigneau rschulz xingxu