robfsouza's profile

About me

Username:	robfsouza
Name:	Not specified
Job title:	Not specified
Affiliation:	Not specified
Web page:	Not specified
Joined:	2009-04-21

What I do

Not specified

Interests

Not specified

Recent Activity

2009-11-24

18:04: posted Evolution by leaps: gene duplication in bacteria
15:17: posted Low conservation of gene content in the Drosophila Y chromosome
15:17: posted The power of phylogenetic comparison in revealing protein function
15:17: posted Neutral and adaptive variation in gene expression
15:17: posted Structure-guided recombination creates an artificial family of cytochromes P450
15:17: posted MinJ (YvjD) is a topological determinant of cell division inBacillus subtilis
15:17: posted Massive horizontal gene transfer in bdelloid rotifers
15:17: posted Selectionism and neutralism in molecular evolution
15:17: posted Alignment uncertainty and genomic analysis
15:17: posted Accuracy and quality of massively parallel DNA pyrosequencing
15:17: posted The hidden universal distribution of amino acid biosynthetic networks: a genomic perspective on their origins and evolution
15:17: posted A GENEALOGICAL APPROACH TO QUANTIFYING LINEAGE DIVERGENCE
15:17: posted Prospects for inferring very large phylogenies by using the neighbor-joining method
15:17: posted Small silencing RNAs
15:17: posted Mutation-selection models of codon substitution and their use to estimate selective strengths on codon usage
15:17: posted The evolution of genome compression and genomic novelty in RNA viruses
15:17: posted Surface sites for engineering allosteric control in proteins
15:17: posted Protein meta-functional signatures from combining sequence, structure, evolution, and amino acid property information
15:17: posted Evolution of hormone-receptor complexity by molecular exploitation
15:17: posted metabolic_networks_05
15:17: posted Phylogenetic profiles reveal evolutionary relationships within the "twilight zone" of sequence similarity
15:17: posted A unified classification system for eukaryotic transposable elements should reflect their phylogeny
15:17: posted hla_popgen.dvi
15:17: posted Inferring genomic flux in bacteria
15:17: posted Unraveling the genomic mosaic of a ubiquitous genus of marine cyanobacteria
15:17: posted Big data: Distilling meaning from data
15:17: posted Artigo_Final_v228_jul_2006
15:17: posted Modular decomposition of protein-protein interaction networks
15:17: posted Large-scale assignment of orthology: back to phylogenetics?
15:17: posted Emergence of diverse biochemical activities in evolutionarily conserved structural scaffolds of proteins
15:17: posted Evolutionary patterns in prokaryotic genomes
15:17: posted An in vivo map of the yeast protein interactome
15:17: posted A specificity map for the PDZ domain family
15:17: posted Using ESTs for phylogenomics: can one accurately infer a phylogenetic tree from a gappy alignment?
15:17: posted Evolution of taxis responses in virtual bacteria: non-adaptive dynamics
15:17: posted Mapping translocation breakpoints by next-generation sequencing
15:17: posted Loss of genes implicated in gastric function during platypus evolution
15:17: posted The genome of the choanoflagellate Monosiga brevicollis and the origin of metazoans
15:17: posted Automated protein subfamily identification and classification
15:17: posted Metagenomics: genomic analysis of microbial communities
15:17: posted Assessing the evolutionary impact of amino acid mutations in the human genome
15:17: posted Biological Organizations
15:17: posted The descent of the antibody-based immune system by gradual evolution
15:17: posted Large-Scale Structural Analysis of the Classical Human Protein Tyrosine Phosphatome
15:17: posted Molecular signatures of ribosomal evolution
15:17: posted Evolutionarily conserved pathways of energetic connectivity in protein families
15:17: posted Sequence-based prediction of protein-protein interactions by means of codon usage
15:17: posted Adaptation in the env gene of HIV-1 and evolutionary theories of disease progression
15:17: posted Development and application of a phylogenomic toolkit: resolving the evolutionary history of Madagascar's lemurs
15:17: posted Sequence similarity network reveals common ancestry of multidomain proteins
15:17: posted Prediction of novel families of enzymes involved in oxidative and other complex modifications of bases in nucleic acids
15:17: posted Recombination speeds adaptation by reducing competition between beneficial mutations in populations of Escherichia coli
15:17: posted uDENN, DENN, and dDENN: indissociable domains in Rab and MAP kinases signaling pathways
15:17: posted Phylogenetic evidence for deleterious mutation load in RNA viruses and its contribution to viral evolution
15:17: posted Gene conversion and purifying selection of a placenta-specific ERV-V envelope gene during simian evolution
15:17: posted Phylogeny-Aware Gap Placement Prevents Errors in Sequence Alignment and Evolutionary Analysis
15:17: posted A novel component of the division-site selection system ofBacillus subtilisand a new mode of action for the division inhibitor MinCD
15:17: posted Lasting impressions: motifs in protein-protein maps may provide footprints of evolutionary events
15:17: posted Molecular architecture and functional model of the complete yeast ESCRT-I heterotetramer
15:17: posted Molecular evolution of a primate-specific microRNA family
15:17: posted Efficient restraints for protein-protein docking by comparison of observed amino acid substitution patterns with those predicted from local environment
15:17: posted Ch{\\ae}tognath transcriptome reveals ancestral and unique features among bilaterians

2009-11-23

03:14: posted Computational Approaches for Protein Function Prediction

2009-11-20

23:52: posted MUSTANG: A multiple structural alignment algorithm

2009-11-19

20:53: posted Comparative genomics and structural biology of the molecular innovations of eukaryotes

2009-11-18

19:47: posted uDENN, DENN, and dDENN: Indissociable Domains in Rab and MAP Kinases Signaling Pathways