Uwe Schmitt's Top Recommendations

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	Extracting interactions between proteins from the literature. [My Copy] Journal of biomedical informatics, Vol. 41, No. 2. (15 April 2008), pp. 393-407. by D. Zhou, Y. He posted by 7 people robert85 liblab Bioinformatics svozil satre gmonce guhjy
	What is a hidden Markov model? [My Copy] Nature Biotechnology, Vol. 22, No. 10. (01 October 2004), pp. 1315-1316. by Sean R. Eddy posted by 17 people dfdong orzenil Yanno flips hpaces mjoach svozil skumagai gulkur brian aprasad indigoviolet timflutre berthoums EisenLab mailund dullhunk
	SYMBIOmatics: synergies in Medical Informatics and Bioinformatics--exploring current scientific literature for emerging topics. [My Copy] BMC Bioinformatics, Vol. 8 Suppl 1 (2007) by D. Rebholz-Schuhman, G. Cameron, D. Clark, et al.E. van Mulligen, J. L. Coatrieux, E. Del Hoyo Barbolla, F. Martin-Sanchez, L. Milanesi, I. Porro, F. Beltrame, I. Tollis, J. Van der Lei posted by 5 people Bioinformatics svozil guhjy hpiwowar waghsk
	Biopython: freely available Python tools for computational molecular biology and bioinformatics [My Copy] Bioinformatics, Vol. 25, No. 11. (1 June 2009), pp. 1422-1423. by Peter J. A. Cock, Tiago Antao, Jeffrey T. Chang, et al.Brad A. Chapman, Cymon J. Cox, Andrew Dalke, Iddo Friedberg, Thomas Hamelryck, Frank Kauff, Bartek Wilczynski, Michiel J. L. de Hoon posted by 47 people Geknitics pekrau Systems_Biology Computational_Systems_Biology Sergey_gerbek hwright jfr karinaecomp applebyb klexa rdiaz FabienneGranier thegoose Structural Biology Group TorVergata oteri cmzmasek jwm guhjy Journal picks AlexBateman daforerog ltitodem Thaverkamp baker-group sobolevnrm psique Bioinformatics dswan neils dullhunk bertelsen Vincent_Rouilly gwallau brianb jorisslob svenrahmann jmeppley VGreiff sjcockell druvus Software-Architecture OER_Open_Educational_Resources Method_Engineering_Services jago kshameer operon svozil
	A survey of available tools and web servers for analysis of protein-protein interactions and interfaces [My Copy] Brief Bioinform, Vol. 10, No. 3. (1 May 2009), pp. 217-232. by Nurcan Tuncbag, Gozde Kar, Ozlem Keskin, Attila Gursoy, Ruth Nussinov posted by 16 people dfdong jinghu_fandm daforerog qluo SaraNasser mikaellund reyez diamantis apaydin structural_bioinformatics McCammon Bioinformatics barry semin renatomilani svozil
	Using machine learning to extract drug and gene relationships from text [My Copy] (2004) by Jeffrey T. Chang posted by 2 people Bioinformatics svozil
	Beyond TFIDF weighting for text categorization in the vector space model [My Copy] In In Proceedings of the Proceedings of the 19th International Joint Conference on Artificial Intelligence (IJCAI 2005 (2005), pp. 1130-1135. by Pascal Soucy posted by 2 people Bioinformatics svozil
	Fundamentals of Data Mining in Genomics and Proteomics [My Copy] (19 December 2006) posted by 2 people imrchen svozil
	What is principal component analysis? [My Copy] Nature Biotechnology, Vol. 26, No. 3. (01 March 2008), pp. 303-304. by Markus Ringner posted by 73 people singhsh Jporci tnhh ruvido ucbcjbm daforerog Diego_Prada abellogin nguizard thegoose2 arsyed Zephyrus flips svozil VGreiff kaniko ssgong Yanno guhjy operon barry baaic dullhunk Bevan_Weir zeji gareth massivemayhem zwang GustavoLacerda GeeSharpMinor bmaust zambujo mingzhi starz1010101 maralena wchannels sunhwan jennifermbui kdelavega zhouyu rsantana sobolevnrm baker-group fryanpan kengg rvosa FAB-lab dekay23 adacier Bioinformatics hpaces waghsk rchauhan pavanghatty kristgy jfr bibay2004 xingxu quianominorleo craigwilson06 ashko markusd dayjm dimka i-stevenson chrissp100 tharris ale mjoach HugoMarcelo jdiezperezj rrbarb Nici
	Experience using web services for biological sequence analysis. [My Copy] Briefings in bioinformatics, Vol. 9, No. 6. (11 November 2008), pp. 493-505. by Heinz Stockinger, Teresa Attwood, Shahid Nadeem N. Chohan, et al.Richard Côté, Philippe Cudré-Mauroux, Laurent Falquet, Pedro Fernandes, Robert D. Finn, Taavi Hupponen, Eija Korpelainen, Alberto Labarga, Aurelie Laugraud, Tania Lima, Evangelos Pafilis, Marco Pagni, Steve Pettifer, Isabelle Phan, Nazim Rahman posted by 15 people daforerog pekrau svozil behindtherabbit Bioinformatics dswan allysonlister alaninmcr jmeppley Cortel kshameer guhjy druvus dullhunk nuin
	Medical informatics and bioinformatics: a bibliometric study. [My Copy] IEEE transactions on information technology in biomedicine : a publication of the IEEE Engineering in Medicine and Biology Society, Vol. 11, No. 3. (May 2007), pp. 237-243. by J. Y. Bansard, D. Rebholz-Schuhmann, G. Cameron, et al.D. Clark, E. van Mulligen, E. Beltrame, E. Barbolla, Del Hoyo d. e. l. . H. Martin-Sanchez, L. Milanesi, I. Tollis, J. van der Lei, J. L. Coatrieux posted by 7 people artaban421 lmichan Bioinformatics svozil dullhunk hpiwowar Gaetan
	Theoretical Comparison between the Gini Index and Information Gain Criteria [My Copy] Annals of Mathematics and Artificial Intelligence, Vol. 41 (2000), pp. 77-93. by Laura E. Raileanu, Kilian Stoffel posted by 2 people Bioinformatics svozil
	An analysis of statistical term strength and its use in the indexing and retrieval of molecular biology texts. [My Copy] Computers in biology and medicine, Vol. 26, No. 3. (May 1996), pp. 209-222. by W. J. Wilbur, Y. Yang posted by 2 people Bioinformatics svozil
	Dissecting protein-RNA recognition sites [My Copy] Nucl. Acids Res., Vol. 36, No. 8. (19 March 2008), pp. gkn102-2716. by Ranjit P. Bahadur, Martin Zacharias, Joel Janin posted by 8 people balewis aditi9783 Bioinformatics svozil dfgreen zhouyu marck inesdesantiago
	Extraction of semantic biomedical relations from text using conditional random fields [My Copy] BMC Bioinformatics, Vol. 9, No. 1. (2008), 207. by Markus Bundschus, Mathaeus Dejori, Martin Stetter, Volker Tresp, Hans P. Kriegel posted by 12 people artaban421 Scis0000002 NaCTeM Effie Bioinformatics svozil ogenex yas guhjy bundschu naegele TheresaNiederberger
	BioRAT: extracting biological information from full-length papers [My Copy] Bioinformatics, Vol. 20, No. 17. (22 November 2004), pp. 3206-3213. by David P. A. Corney, Bernard F. Buxton, William B. Langdon, David T. Jones posted by 21 people robert85 Bioinformatics svozil BergmanLab cisevol arafalov camster snuppepuppan irenas Enro guhjy A_Olympia helliontroy massivemayhem Philosophy_of_Information dbk-lab Blog_and_Wiki_Research biomedical-nlp sobolevnrm baker-group satre
	A roadmap of clustering algorithms: finding a match for a biomedical application [My Copy] Brief Bioinform, Vol. 10, No. 3. (1 May 2009), pp. 297-314. by Bill Andreopoulos, Aijun An, Xiaogang Wang, Michael Schroeder posted by 17 people jfr mhamidi eliasman Gorzomagnificent reyez brianb nuin m509396 jmeppley tmmurali tonamswish VGreiff baker-group sobolevnrm Bioinformatics barry svozil
	Artificial intelligence techniques for bioinformatics. [My Copy] Appl Bioinformatics, Vol. 1, No. 4. (2002), pp. 191-222. by A. Narayanan, E. C. Keedwell, B. Olsson posted by 3 people Bioinformatics svozil gpalidwor
	Scalable sequential pattern mining for biological sequences [My Copy] In CIKM '04: Proceedings of the thirteenth ACM international conference on Information and knowledge management (2004), pp. 178-187. by Ke Wang, Yabo Xu, Jeffrey X. Yu posted by 2 people svozil imrchen
	HBexplore--a new tool for identifying and analysing hydrogen bonding patterns in biological macromolecules. [My Copy] Computer applications in the biosciences : CABIOS, Vol. 12, No. 4. (August 1996), pp. 281-289. by K. Lindauer, C. Bendic, J. Sühnel posted by 2 people Bioinformatics svozil
	Automated motif extraction and classification in RNA tertiary structures. [My Copy] RNA (New York, N.Y.), Vol. 14, No. 12. (December 2008), pp. 2489-2497. by M. Djelloul, A. Denise posted by 3 people Bioinformatics svozil mhamada
	Classification algorithms for phenotype prediction in genomics and proteomics. [My Copy] Frontiers in bioscience : a journal and virtual library, Vol. 13 (2008), pp. 691-708. by Habtom W. Ressom, Rency S. Varghese, Zhen Zhang, Jianhua Xuan, Robert Clarke posted by 8 people zufar Bioinformatics svozil bertelsen shikin akastrin guhjy giovenko
	Support Vector Machines and Kernels for Computational Biology [My Copy] PLoS Comput Biol, Vol. 4, No. 10. (31 October 2008), e1000173. by Asa Ben-Hur, Cheng S. Ong, Sören Sonnenburg, Bernhard Schölkopf, Gunnar Rätsch posted by 36 people guhjy VGreiff tomhebbron ucbcjbm thegoose Zephyrus phoenixzxl winterschlaefer kshameer Bioinformatics svozil mmartin jfr MarcoAlvarez baker-group sobolevnrm Yanno Scis0000002 srp33 GustavoLacerda nuin rdiaz dakelley rschulz Borelli taguchi VisionLab kristina bayesian chad_davis mdstobbe tny giovenko markchen druvus GeeSharpMinor
	The Ant Colony Optimization Metaheuristic: Algorithms, Applications, and Advances [My Copy] Handbook of Metaheuristics (2003), pp. 250-285. by Marco Dorigo, Thomas Stützle posted by 4 people Bioinformatics svozil Scout/Leader Systems andreud
	Nonnegative Matrix Factorization: An Analytical and Interpretive Tool in Computational Biology [My Copy] PLoS Comput Biol, Vol. 4, No. 7. (25 July 2008), e1000029. by Karthik Devarajan posted by 14 people kshameer bertelsen svozil rdiaz ptrobajo jfr aramesh2 roys bayesian bpcusack cabbagesofdoom luispedro guhjy mikaelhuss
	A Perspective View And Survey Of Meta-Learning [My Copy] Artificial Intelligence Review, Vol. 18 (2002), pp. 77-95. by Ricardo Vilalta, Youssef Drissi posted by 2 people Bioinformatics svozil
	Ant Colony Optimization – Artificial Ants as a Computational Intelligence Technique [My Copy] IEEE Comput. Intell. Mag, Vol. 1 (2006), pp. 28-39. by Marco Dorigo, Mauro Birattari, Thomas Stützle, Université Libre, De Bruxelles, Av F. D. Roosevelt posted by 2 people Bioinformatics svozil
	Hidden Markov models. [My Copy] Curr Opin Struct Biol, Vol. 6, No. 3. (June 1996), pp. 361-365. by S. R. Eddy posted by 6 people svozil gulkur bayesian chad_davis rabio suizan
	A Review on the Ant Colony Optimization Metaheuristic: Basis, Models and New Trends [My Copy] Mathware & Soft Computing, Vol. 9 (2002), pp. 141-175. by Oscar Cordon, Francisco Herrera, Thomas Stützle posted by 2 people Bioinformatics svozil
	Better Bioinformatics Through Usability Analysis. [My Copy] Bioinformatics (Oxford, England) (9 December 2008) by Davide Bolchini, Anthony Finkelstein, Vito Perrone, Sylvia Nagl posted by 23 people pekrau FabienneGranier guhjy svozil pkonings dbk rmhirsk niallhaslam renatomilani chrisamiller Yanno fgibson zimbo1 druvus allysonlister Bioinformatics dswan behindtherabbit neils dullhunk sjcockell nuin jmeppley
	The use of domain-specific concepts in biomedical text summarization [My Copy] Information Processing & Management, Vol. 43, No. 6. (November 2007), pp. 1765-1776. by L. Reeve, H. Han, A. Brooks posted by 2 people Bioinformatics svozil
	ANGLOR: A Composite Machine-Learning Algorithm for Protein Backbone Torsion Angle Prediction [My Copy] PLoS ONE, Vol. 3, No. 10. (15 October 2008), e3400. by Sitao Wu, Yang Zhang posted by 3 people structural_bioinformatics Bioinformatics svozil
	Discovering the interaction propensities of amino acids and nucleotides from protein-RNA complexes. [My Copy] Molecules and cells, Vol. 16, No. 2. (31 October 2003), pp. 161-167. by E. Jeong, H. Kim, S. W. Lee, K. Han posted by 3 people balewis Bioinformatics svozil
	Fast and accurate short read alignment with Burrows-Wheeler transform. [My Copy] Bioinformatics (Oxford, England), Vol. 25, No. 14. (15 July 2009), pp. 1754-1760. by Heng Li, Richard Durbin posted by 38 people lianping hzoltan cthachuk maren bozdagd adijr heliopais jmanning2k GustavoLacerda stubrown jessopher guhjy katholt mkiyer jmcq idonaldson michaelbarton BergmanLab polivares darian orzenil cassj inesdesantiago TRHvidsten djkt operon SIMR bioinformatics ghattem n00c Bioinformatics danmaclean Journal picks ppgardne nuin rschulz natstreet druvus humburg
	The thermodynamics of DNA structural motifs. [My Copy] Annu Rev Biophys Biomol Struct, Vol. 33 (2004), pp. 415-440. by J. SantaLucia, D. Hicks posted by 4 people Vincent_Rouilly svozil balajis stsaft
	Databases, models, and algorithms for functional genomics: a bioinformatics perspective. [My Copy] Molecular biotechnology, Vol. 29, No. 2. (February 2005), pp. 165-183. by G. B. Singh, H. Singh posted by 2 people Bioinformatics svozil
	Knowledge discovery in biology and biotechnology texts: a review of techniques, evaluation strategies, and applications. [My Copy] Critical reviews in biotechnology, Vol. 25, No. 1-2. (n 2005), pp. 31-52. by J. Natarajan, D. Berrar, C. J. Hack, W. Dubitzky posted by 4 people mitko Bioinformatics svozil lmichan
	Frontiers of biomedical text mining: current progress [My Copy] Brief Bioinform (30 October 2007), bbm045. by Pierre Zweigenbaum, Dina Demner-Fushman, Hong Yu, Kevin B. Cohen posted by 24 people artaban421 Effie Bioinformatics svozil eitanla1 junehlee Keywan arafalov henk-cul Waderoad vkwn farzanehs bqchinh BergmanLab cisevol guhjy yas dullhunk hpiwowar dbmi-nlp wchapman yggdrasil TheresaNiederberger irenas
	Accessing and integrating data and knowledge for biomedical research. [My Copy] Yearbook of medical informatics (2008), pp. 91-101. by A. Burgun, O. Bodenreider posted by 12 people mitko rogerioFabbrini Bioinformatics svozil STS Method_Engineering_Services Convention on Knowledge Commons Integrative Expertise for Global Health jago nudai dansullivanblk Gaetan
	Evaluation of biomedical text-mining systems: lessons learned from information retrieval. [My Copy] Briefings in bioinformatics, Vol. 6, No. 4. (December 2005), pp. 344-356. by William Hersh posted by 8 people artaban421 daforerog lmichan Bioinformatics svozil henk-cul aheilbut hpiwowar
	Biological entity recognition with conditional random fields. [My Copy] AMIA ... Annual Symposium proceedings / AMIA Symposium. AMIA Symposium (2008), pp. 293-297. by Y. He, M. Kayaalp posted by 2 people Bioinformatics svozil
	Pattern Matching in RNA Structures [My Copy] Bioinformatics Research and Applications (2008), pp. 317-330. by Kejie Li, Reazur Rahman, Aditi Gupta, Prasad Siddavatam, Michael Gribskov posted by 2 people Bioinformatics svozil
	PuReD-MCL: a graph-based PubMed document clustering methodology [My Copy] Bioinformatics, Vol. 24, No. 17. (1 September 2008), pp. 1935-1941. by T. Theodosiou, N. Darzentas, L. Angelis, C. A. Ouzounis posted by 10 people calderonv Bioinformatics svozil coela guhjy druvus Gaetan mitko rabio dullhunk
	Identifying gene and protein mentions in text using conditional random fields [My Copy] BMC Bioinformatics, Vol. 6, No. Suppl 1. (2005), S6. by Ryan Mcdonald, Fernando Pereira posted by 9 people robert85 Bioinformatics svozil yas bundschu bhaddow johnkork gmonce generif_paper
	Structural Alphabets for Protein Structure Classification: A Comparison Study [My Copy] Journal of Molecular Biology (25 December 2008) by Q. Le, G. Pollastri, P. Koehl posted by 7 people zwang svozil idoerg structural_bioinformatics Bioinformatics barry reyez
	The limits of protein sequence comparison? [My Copy] Current opinion in structural biology, Vol. 15, No. 3. (June 2005), pp. 254-260. by William R. Pearson, Michael L. Sierk posted by 5 people Bioinformatics svozil richardbickerton yylin BioNica
	Gene name ambiguity of eukaryotic nomenclatures. [My Copy] Bioinformatics, Vol. 21, No. 2. (15 January 2005), pp. 248-256. by L. Chen, H. Liu, C. Friedman posted by 9 people Bioinformatics svozil BergmanLab cisevol snuppepuppan irenas yas dbk-lab T_lab
	Graph-based methods for analysing networks in cell biology. [My Copy] Briefings in bioinformatics, Vol. 7, No. 3. (1 September 2006), pp. 243-255. by Tero Aittokallio, Benno Schwikowski posted by 14 people daforerog abhishek_tiwari svozil ajbattle cswinburne yaredo barry tmmurali aswin grahamc jmarcelino structural_bioinformatics Bioinformatics iris_2001
	ROC analysis: applications to the classification of biological sequences and 3D structures [My Copy] Brief Bioinform (11 January 2008), bbm064. by Paolo Sonego, Andras Kocsor, Sandor Pongor posted by 5 people svozil cjeans neils nklee spsdigest
	Genome sequencing in microfabricated high-density picolitre reactors [My Copy] Nature, Vol. 437, No. 7057. (31 July 2005), pp. 376-380. by Marcel Margulies, Michael Egholm, William E. Altman, et al.Said Attiya, Joel S. Bader, Lisa A. Bemben, Jan Berka, Michael S. Braverman, Yi-Ju Chen, Zhoutao Chen, Scott B. Dewell, Lei Du, Joseph M. Fierro, Xavier V. Gomes, Brian C. Godwin, Wen He, Scott Helgesen, Chun H. Ho, Gerard P. Irzyk, Szilveszter C. Jando, Maria L. I. Alenquer, Thomas P. Jarvie, Kshama B. Jirage, Jong-Bum Kim, James R. Knight, Janna R. Lanza, John H. Leamon, Steven M. Lefkowitz, Ming Lei, Jing Li, Kenton L. Lohman, Hong Lu, Vinod B. Makhijani, Keith E. McDade, Michael P. McKenna, Eugene W. Myers, Elizabeth Nickerson, John R. Nobile, Ramona Plant, Bernard P. Puc, Michael T. Ronan, George T. Roth, Gary J. Sarkis, Jan F. Simons, John W. Simpson, Maithreyan Srinivasan, Karrie R. Tartaro, Alexander Tomasz, Kari A. Vogt, Greg A. Volkmer, Shally H. Wang, Yong Wang, Michael P. Weiner, Pengguang Yu, Richard F. Begley, Jonathan M. Rothberg posted by 44 people n00c rshe seb1 pachorip katiehumphry jonilaserson michaelbarton sandfire natstreet daforerog idoerg mmartin azazello jbhiatt alessandrobrozzi leechuck bjorns dayjm jmeppley arve RMGraze JAShapiro balajis cdawson AaronDarling treangen usagi-kirin beatrizfernandez wenhan xingxu erbon Microbial-Ecology GIG gatech-compgenomics tpreeprem farhat carpi bpb mcox GustavoLacerda jlgreen Green Lab iSEEM kieran101
	A comprehensive evaluation of multicategory classification methods for microarray gene expression cancer diagnosis [My Copy] Bioinformatics, Vol. 21, No. 5. (1 March 2005), pp. 631-643. by Alexander Statnikov, Constantin F. Aliferis, Ioannis Tsamardinos, Douglas Hardin, Shawn Levy posted by 9 people svozil aviad_work chad_davis archroad dimatura kallberg srp33 slevy03 vmsr
	The Text Mining Handbook: Advanced Approaches in Analyzing Unstructured Data [My Copy] (11 December 2006) by Ronen Feldman, James Sanger posted by 12 people cmalek robert85 RandolphCarter vlasto Information Retrieval fly51fly dullhunk gunv imrchen akastrin markymaypo ARTFL
	RNA and protein folding: common themes and variations. [My Copy] Biochemistry, Vol. 44, No. 13. (5 April 2005), pp. 4957-4970. by D. Thirumalai, C. Hyeon posted by 1 person svozil
	Bayesian probabilistic approach for predicting backbone structures in terms of protein blocks. [My Copy] Proteins, Vol. 41, No. 3. (15 November 2000), pp. 271-287. by A. G. de Brevern, C. Etchebest, S. Hazout posted by 2 people svozil dgront
	Computational intelligence approaches for pattern discovery in biological systems [My Copy] Brief Bioinform (5 May 2008), bbn021. by Gary B. Fogel posted by 8 people pablocarb kshameer svozil druvus operon guhjy maximilianh renatomilani
	Status of text-mining techniques applied to biomedical text [My Copy] Drug Discovery Today, Vol. 11, No. 7-8. (April 2006), pp. 315-325. by R. Erhardt, R. Schneider, C. Blaschke posted by 21 people holopoj mitko fisherp liblab Bioinformatics svozil Zephyrus ogenex lesikv henk-cul bqchinh Enro guhjy hpiwowar ibuch mroos AID TheresaNiederberger akastrin aliekens irenas
	A vector space model for automatic indexing [My Copy] Commun. ACM, Vol. 18, No. 11. (November 1975), pp. 613-620. by G. Salton, A. Wong, C. S. Yang posted by 41 people fer eabait minshady meikipp gavinhoran Bioinformatics svozil fordparsons pcchang85 gerold baaic fisherp gilsonline ssn pdlug ville jcampos k12u yas mthomure ianturton taho naufraghi frohike noa codex chirayu_kong ransombriggs tomrowlands Nien diogomartins markymaypo thesis2007 T_lab Adaptive-Web ARTFL Wurlitzer Tronhus mediallo takeha-e jaychoo
	Comprehensive structural classification of ligand-binding motifs in proteins. [My Copy] Structure (London, England : 1993), Vol. 17, No. 2. (13 February 2009), pp. 234-246. by Akira R. Kinjo, Haruki Nakamura posted by 2 people tprpip svozil
	Ant colony optimization: Introduction and recent trends [My Copy] Physics of Life Reviews, Vol. 2, No. 4. (December 2005), pp. 353-373. by Christian Blum posted by 7 people pverstra Bioinformatics svozil balicea hkaruna lop macc
	Optimization in computational systems biology [My Copy] BMC Systems Biology, Vol. 2, No. 1. (2008), 47. by Julio Banga posted by 11 people druvus jvb svozil mazloom guhjy tmmurali reyez jrbanga biehl balicea phoenixzxl
	Machine learning in bioinformatics: A brief survey and recommendations for practitioners [My Copy] Computers in Biology and Medicine In Intelligent Technologies in Medicine and Bioinformatics, Vol. 36, No. 10. (October 2006), pp. 1104-1125. by Harish Bhaskar, David C. Hoyle, Sameer Singh posted by 4 people svozil drmabuse rsantana xili03
	Protein folding: from the levinthal paradox to structure prediction. [My Copy] J Mol Biol, Vol. 293, No. 2. (22 October 1999), pp. 283-293. by B. Honig posted by 3 people newton1234 svozil wouterboomsma
	Frequency and isostericity of RNA base pairs [My Copy] Nucl. Acids Res. (24 February 2009), gkp011. by Jesse Stombaugh, Craig L. Zirbel, Eric Westhof, Neocles B. Leontis posted by 3 people reyez samgj svozil
	Prediction of Protein Secondary Structure at Better than 70% Accuracy [My Copy] Journal of Molecular Biology, Vol. 232, No. 2. (20 July 1993), pp. 584-599. by Burkhard Rost, Chris Sander posted by 3 people kgutwin svozil chad_davis
	Global reconstruction of the human metabolic network based on genomic and bibliomic data. [My Copy] Proceedings of the National Academy of Sciences of the United States of America, Vol. 104, No. 6. (6 February 2007), pp. 1777-1782. by N. C. Duarte, S. A. Becker, N. Jamshidi, et al.I. Thiele, M. L. Mo, T. D. Vo, R. Srivas, B. Ø. Palsson posted by 11 people vpenelle peterli schwartzjmc michaelbarton dullhunk guhjy balajis alexg raiyar noby steinmetzlab
	A literature network of human genes for high-throughput analysis of gene expression. [My Copy] Nature genetics, Vol. 28, No. 1. (May 2001), pp. 21-28. by T. K. Jenssen, A. Laegreid, J. Komorowski, E. Hovig posted by 18 people vkwn biblio24 guhjy robert85 irenas miguel okarsligil lfriedl yas balajis benny dullhunk dbk-lab kdl Bioinformatics T_lab adoms TheresaNiederberger
	Advanced Analysis of Gene Expression Microarray Data (Science, Engineering, and Biology Informatics) [My Copy] (27 June 2006) by Aidong Zhang posted by 2 people svozil akastrin
	The systems biology markup language (SBML): a medium for representation and exchange of biochemical network models [My Copy] Bioinformatics, Vol. 19, No. 4. (1 March 2003), pp. 524-531. by M. Hucka, A. Finney, H. M. Sauro, et al.H. Bolouri, J. C. Doyle, H. Kitano, and the rest of the SBML Forum:, A. P. Arkin, B. J. Bornstein, D. Bray, A. Cornish-Bowden, A. A. Cuellar, S. Dronov, E. D. Gilles, M. Ginkel, V. Gor, I. I. Goryanin, W. J. Hedley, T. C. Hodgman, J. H. Hofmeyr, P. J. Hunter, N. S. Juty, J. L. Kasberger, A. Kremling, U. Kummer, N. Le Novere, L. M. Loew, D. Lucio, P. Mendes, E. Minch, E. D. Mjolsness, Y. Nakayama, M. R. Nelson, P. F. Nielsen, T. Sakurada, J. C. Schaff, B. E. Shapiro, T. S. Shimizu, H. D. Spence, J. Stelling, K. Takahashi, M. Tomita, J. Wagner, J. Wang posted by 23 people jporternj daforerog Jiang Research Group whitead antonkratz michaelbarton allysonlister rh020 shikin subhacom irenas husain easr balajis wnpx jbchang lenov dbk-lab nicholasflann pmendes csanford AlexanderPico dullhunk
	Identifying protein-coding genes in genomic sequences [My Copy] Genome Biology, Vol. 10, No. 1. (30 January 2009), 201. by Jennifer Harrow, Alinda Nagy, Alexandre Reymond, et al.Tyler Alioto, Laszlo Patthy, Stylianos Antonarakis, Roderic Guigo posted by 17 people Bioinformatics jfr antonkratz robfsouza nlapalu renatomilani Khavkin's lab ArtemPankin hpaces guhjy michaelbarton idoerg jm12 pawelszczesny natstreet barriot druvus
	Statistical analysis of atomic contacts at RNA-protein interfaces. [My Copy] J Mol Recognit, Vol. 14, No. 4. (g 2001), pp. 199-214. by M. Treger, E. Westhof posted by 5 people balewis Bioinformatics svozil lillekatt medic0747
	An introduction to hidden Markov models. [My Copy] Current protocols in bioinformatics / editoral board, Andreas D. Baxevanis ... [et al.], Vol. Appendix 3 (June 2007) by B. Schuster-Böckler, A. Bateman posted by 3 people flips hpaces svozil
	Position-Dependent Motif Characterization Using Nonnegative Matrix Factorization. [My Copy] Bioinformatics (Oxford, England) (13 October 2008) by Lucie N N. Hutchins, Sean M M. Murphy, Priyam Singh, Joel H H. Graber posted by 3 people bio_dataminer svozil nuin
	Object tracking: A survey [My Copy] ACM Comput. Surv., Vol. 38, No. 4. (2006), 13. by Alper Yilmaz, Omar Javed, Mubarak Shah posted by 27 people rabit bedieber gavin1332 attilaachenbach erensoyak jmmartinez varung AnzaA emailhy jrodriguez pqnga egozi axin pwais mzabidi qwermish thsant e_sommerlade ElQuijote42 quam fommil ThinkTank maelp disimitusimi cbeltran alucchi CRAFT
	Gene set enrichment analysis: A knowledge-based approach for interpreting genome-wide expression profiles [My Copy] Proceedings of the National Academy of Sciences of the United States of America, Vol. 102, No. 43. (25 October 2005), pp. 15545-15550. by Aravind Subramanian, Pablo Tamayo, Vamsi K. Mootha, et al.Sayan Mukherjee, Benjamin L. Ebert, Michael A. Gillette, Amanda Paulovich, Scott L. Pomeroy, Todd R. Golub, Eric S. Lander, Jill P. Mesirov posted by 50 people gbloeb miskar giovenko greg dolchan pattersonee mhamidi jperkins zufar ptrobajo antonkratz yaredo tmmurali VGreiff daforerog paszkows ipark-kaist bertelsen ajbattle jessopher askrajiv idonaldson ihpark chrisamiller dragonrez jfr balajis maryee xwbcn hpiwowar aviad_work ealloza jdiggans jeremymiller frohike hawkeyehammer schuylrp natstreet Bioinformatics BioinfoCIPF GeschwindLab Indigene heliopais shikin waghsk roys ellakat srp33 sgoetz AbnerCYH
	Protein-nucleic acid recognition: statistical analysis of atomic interactions and influence of DNA structure. [My Copy] Proteins, Vol. 61, No. 2. (1 November 2005), pp. 258-271. by D. Lejeune, N. Delsaux, B. Charloteaux, A. Thomas, R. Brasseur posted by 5 people kaarsinogen Bioinformatics svozil aalibes medic0747
	CDD: a Conserved Domain Database for protein classification. [My Copy] Nucleic Acids Res, Vol. 33, No. Database issue. (1 January 2005) by A. Marchler-Bauer, J. B. Anderson, P. F. Cherukuri, et al.C. DeWeese-Scott, L. Y. Geer, M. Gwadz, S. He, D. I. Hurwitz, J. D. Jackson, Z. Ke, C. J. Lanczycki, C. A. Liebert, C. Liu, F. Lu, G. H. Marchler, M. Mullokandov, B. A. Shoemaker, V. Simonyan, J. S. Song, P. A. Thiessen, R. A. Yamashita, J. J. Yin, D. Zhang, S. H. Bryant posted by 4 people balajis cjeans rabio gulkur
	The role of water in protein-DNA recognition. [My Copy] Annu Rev Biophys Biomol Struct, Vol. 33 (2004), pp. 343-361. by B. Jayaram, T. Jain posted by 3 people svozil yoonk medic0747
	Inferring functional information from domain co-evolution. [My Copy] Bioinformatics, Vol. 22, No. 1. (1 January 2006), pp. 40-49. by Y. Kim, M. Koyutürk, U. Topkara, A. Grama, S. Subramaniam posted by 3 people balajis cjeans gulkur
	Machine Learning and Its Applications to Biology [My Copy] PLoS Comput Biol, Vol. 3, No. 6. (29 June 2007), e116. by Adi L. Tarca, Vincent J. Carey, Xue-wen Chen, Roberto Romero, Sorin Drăghici posted by 18 people colm rwst winterschlaefer Bioinformatics svozil aviad_work druvus giovenko Borelli skhadar julius cjeans asddd ciga nklee kmdaily SysbioMPI-TCells Computational_Information_Geometry
	Statistical pattern recognition for macromolecular crystallographers [My Copy] Acta Crystallographica Section D: Biological Crystallography, Vol. 60, No. 1. (01 December 2004), pp. 2133-2143. by Morris, R.J. posted by 2 people svozil martainn
	Protein-RNA interactions: structural analysis and functional classes. [My Copy] Proteins, Vol. 66, No. 4. (1 March 2007), pp. 903-911. by J. J. Ellis, M. Broom, S. Jones posted by 8 people morrislab balewis Bioinformatics svozil jarasch medic0747 winterschlaefer marck
	A primer on gene expression and microarrays for machine learning researchers [My Copy] Journal of Biomedical Informatics, Vol. 37, No. 4. (August 2004), pp. 293-303. by W. Kuo, E. Kim, J. Trimarchi, T. Jenssen, S. Vinterbo, L. Ohnomachado posted by 2 people stharward svozil
	Discovering semantic features in the literature: a foundation for building functional associations [My Copy] BMC Bioinformatics, Vol. 7, No. 1. (26 January 2006), 41. by Monica Chagoyen, Pedro C. Saez, Hagit Shatkay, Jose Carazo, Alberto P. Montano posted by 11 people artaban421 ImagCom - Biomedical Text Computing eesruiz svozil yas caporaso oannes helliontroy T_lab biomedical-nlp Regulomics_UCHSC
	Probabilistic Modelling in Bioinformatics and Medical Informatics [My Copy] (01 December 2004) by D. Husmeier, R. Dybowski, S. Roberts posted by 3 people svozil wnpx naegele
	CONTRAfold: RNA secondary structure prediction without physics-based models. [My Copy] Bioinformatics, Vol. 22, No. 14. (15 July 2006) by C. B. Do, D. A. Woods, S. Batzoglou posted by 11 people gulkur balajis marcius tardigrade penka condon beta BioinfoCIPF SGU-CIPF acarbo austin
	Singular Value Decomposition and Principal Component Analysis [My Copy] (3 Mar 2003) by Michael E. Wall, Andreas Rechtsteiner, Luis M. Rocha posted by 13 people hjayaweera rramirezp svozil pdlug elsantosneto stanley mystery sdvillal sugarexpletive kklo rspeer zambujo AbnerCYH
	Pathguide: a pathway resource list. [My Copy] Nucleic Acids Res, Vol. 34, No. Database issue. (1 January 2006) by G. D. Bader, M. P. Cary, C. Sander posted by 9 people robert85 behindtherabbit psique fgibson yas balajis blackbart T_lab AlexanderPico
	An overview of the structures of protein-DNA complexes [My Copy] Genome Biology, Vol. 1, No. 1. (2000) by Nicholas M. Luscombe, Susan E. Austin, Helen M. Berman, Janet M. Thornton posted by 7 people agustinarce svozil kaarsinogen indigoviolet medic0747 EisenLab emptyhb
	Structural principles from large RNAs. [My Copy] Annual review of biophysics, Vol. 37, No. 1. (2008), pp. 445-464. by Stephen R. Holbrook posted by 4 people balewis mhamada svozil zwang
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	Basic local alignment search tool. [My Copy] Journal of molecular biology, Vol. 215, No. 3. (5 October 1990), pp. 403-410. by S. F. Altschul, W. Gish, W. Miller, E. W. Myers, D. J. Lipman posted by 84 people VGreiff richter80 krapnik azazello rshe mtaschuk sjcockell niallhaslam djohnson thegoose humburg timhubbard pachorip n00c maria_hauser rpetrenko parnell yylin esyoun APRegier idoerg Neeperando robert85 thegoose2 daforerog mcbla coela alessandroparini bertelsen Blackbeard florisbuijzen laurabailey treangen pwais mmartin C. elegans / WormBase tharris dmp camster davidng evaf dragonrez jwm jmeppley Ayest RMGraze ea yas balajis alexg indigoviolet moborg arcticrasta dullhunk dgront caporaso michC myui BioNica CitoJam rabio timflutre lusk cjeans incovoma beatrizfernandez wenhan jtomasch GustavoLacerda sgoetz siebertm ichbins81 jofiel dbk-lab EisenLab T_lab biomedical-nlp Microbial-Ecology Thaverkamp shung marti ashaytan benwei granujilla
	Object Recognition from Local Scale-Invariant Features [My Copy] Computer Vision, IEEE International Conference on In Computer Vision, 1999. The Proceedings of the Seventh IEEE International Conference on, Vol. 2 (06 August 1999), pp. 1150-1157 vol.2. by David G. Lowe posted by 22 people simogasp mzabidi quam jmarkow haiyeong etidey flordepapel georgeb axin pick600 austinreiter inayatkh kittipat weiweiguo m0ta ferryzhou egozi hawesie CAVIAR tshr doubleshow miyaki
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	Data clustering: a review [My Copy] ACM Comput. Surv., Vol. 31, No. 3. (September 1999), pp. 264-323. by A. K. Jain, M. N. Murty, P. J. Flynn posted by 78 people emailhy erikv thegoose elan urvoy stharward thefillm operon avoregnitiv fer votis pick600 pbk nhoussos qwermish svozil takeha-e eabait mthomure mercutio egh ericyu karbak dgruiz pdlug thsant mapio mhay davidbrooks imouthesmp dfrankow rahul marcius stagediver sterovetta sangeetha chadhogg sdvillal dgront styliani alexhofmann gane5h ianturton bigbossman perceptron allmensch aviad_work julianpan atbrew sugarexpletive KillianKay mkolar sajan dvisoin theodora jcsilva furykerry koles video_retrieval kdl GroupLens Bioinformatics SRL insilicodrug BioinfoCIPF SGU-CIPF MScResearchRessources NDSiTransitRessources NDS106ProjectRessources NDSIntraVehicularResearch ahat Community_SSTZ paulovn AbnerCYH tnhh flaviovdf dragonrez iraklis
	Mining the posterior cingulate: Segregation between memory and pain components [My Copy] NeuroImage, Vol. 27, No. 3. (September 2005), pp. 520-532. by Finn A. Nielsen, Daniela Balslev, Lars K. Hansen posted by 3 people svozil pbellec xinian
	The RNA structure alignment ontology [My Copy] RNA, Vol. 15, No. 9. (21 September 2009), pp. 1623-1631. by James W. Brown, Amanda Birmingham, Paul E. Griffiths, et al.Fabrice Jossinet, Rym Kachouri-Lafond, Rob Knight, B. Franz Lang, Neocles Leontis, Gerhard Steger, Jesse Stombaugh, Eric Westhof posted by 6 people chrisvanlang Bioinformatics svozil Journal picks ppgardne samgj
	A survey of current work in biomedical text mining [My Copy] Brief Bioinform, Vol. 6, No. 1. (1 January 2005), pp. 57-71. by Aaron M. Cohen, William R. Hersh posted by 40 people artaban421 lmichan daforerog guelke eesruiz Bioinformatics svozil blogbrain fitzgeraldp2 henk-cul lauras mitko vkwn BergmanLab cisevol irenas carlblesius route145 yas natsu t11 hpiwowar fisherp biblio24 bhaddow johnkork c061978 kkaiser benfqt dbk-lab Blog_and_Wiki_Research mgh-lcs hst-bmi T_lab Evidence-based-medicine IEG farzanehs satre lillejul TheresaNiederberger
	Top 10 algorithms in data mining [My Copy] Knowledge and Information Systems, Vol. 14, No. 1. (20 January 2008), pp. 1-37. by Xindong Wu, Vipin Kumar, Ross, et al.Joydeep Ghosh, Qiang Yang, Hiroshi Motoda, Geoffrey Mclachlan, Angus Ng, Bing Liu, Philip Yu, Zhi-Hua Zhou, Michael Steinbach, David Hand, Dan Steinberg posted by 18 people singhsh mzabidi pprett karipuf guhjy aviad_work rsantana yuju imrchen EmreSevinc votis haiyeong dquercia pmendes udamahan akastrin Mohan-S eddymier
	Statistical Analysis of Interface Similarity in Crystals of Homologous Proteins. [My Copy] Journal of molecular biology (7 June 2008) by Qifang Xu, Adrian A A. Canutescu, Guoli Wang, Maxim Shapovalov, Zoran Obradovic, Roland L L. Dunbrack posted by 5 people robfsouza svozil kintoki bicko chad_davis
	Geometric hashing: an overview [My Copy] Computational Science and Engineering, IEEE [see also Computing in Science & Engineering], Vol. 4, No. 4. (1997), pp. 10-21. by H. J. Wolfson, I. Rigoutsos posted by 8 people varung paddydu algorithmic mzabidi ima hurricane cgoldfed object detection