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	Dynamic personalities of proteins [My Copy] Nature, Vol. 450, No. 7172. (12 December 2007), pp. 964-972. by Katherine Henzler-Wildman, Dorothee Kern posted by 20 people saravan Diego_Prada xdeupi viktor21614 ruvido barry pavanghatty chad_davis allmensch choonpeng rsantana cjeans sobolevnrm baker-group wilbur mijam kjell phoenixzxl higueruelo GeeSharpMinor
	High-resolution structure prediction and the crystallographic phase problem [My Copy] Nature, Vol. 450, No. 7167. (14 October 2007), pp. 259-264. by Bin Qian, Srivatsan Raman, Rhiju Das, et al.Philip Bradley, Airlie J. McCoy, Randy J. Read, David Baker posted by 19 people bmduggan newton1234 apaydin aheilbut jwm eckart_bindewald ffranca dgront massivemayhem cjeans zwang cactus sobolevnrm baker-group boris_aguilar Ema chenway ardalby OPIG
	The Protein Data Bank [My Copy] Nucl. Acids Res., Vol. 28, No. 1. (1 January 2000), pp. 235-242. by Helen M. Berman, John Westbrook, Zukang Feng, et al.Gary Gilliland, T. N. Bhat, Helge Weissig, Ilya N. Shindyalov, Philip E. Bourne posted by 50 people krapnik barmak7282 viktor21614 badi ucbcjbm TLVincent maria_hauser Martin8223 tomjad Diego_Prada flbarroso Taguan oceanwind dsmueller fisherp semin MarcoAlvarez kumar_physics References for 3DSim paper LamBras RamuAnandakrishnan nlapalu reyez nigham lillekatt thaliana dimka kuhn jwm vavi bicko itmeson dgront caporaso condon aengisch debatebob massivemayhem gisle girschick selrac Radiation_Damage Stressosome biomedical-nlp beta tji higueruelo boris_aguilar sebk timg
	Comparative protein modelling by satisfaction of spatial restraints. [My Copy] Journal of molecular biology, Vol. 234, No. 3. (5 December 1993), pp. 779-815. by A. Sali, T. L. Blundell posted by 17 people bmduggan pjcite newton1234 viktor21614 mijam dimka vavi bicko chad_davis ttjoseph skhadar dgront rabio massivemayhem medic0747 sebk granujilla
	Dictionary of protein secondary structure: Pattern recognition of hydrogen-bonded and geometrical features [My Copy] Biopolymers, Vol. 22, No. 12. (December 1983), pp. 2577-2637. by Wolfgang Kabsch, Christian Sander posted by 33 people barmak7282 Vadikus j3xucite scampos TLVincent maria_hauser pablocarb rpetrenko carlosjavierna mijam wqia007 dsmueller niallhaslam saunders jwm sebk Diego_Prada pjcite kaarsinogen lna chad_davis wouterboomsma penka ffranca dgront choonpeng rabio gisle medic0747 martainn chgjb mschofie marti
	Structure of a protein determined by solid-state magic-angle-spinning NMR spectroscopy. [My Copy] Nature, Vol. 420, No. 6911. (7 November 2002), pp. 98-102. by Federica Castellani, Barth van Rossum, Annette Diehl, Mario Schubert, Kristina Rehbein, Hartmut Oschkinat posted by 6 people aip dgront cychen_cite InesLehner viktor21614 yxue
	Nothing about protein structure classification makes sense except in the light of evolution [My Copy] Current Opinion in Structural Biology, Vol. 19, No. 3. (24 June 2009), pp. 329-334. by Ruben E. Valas, Song Yang, Philip E. Bourne posted by 16 people mkotlyar skywalkerus02 dgront nyyu robfsouza apaydin structural_bioinformatics barry coela R.E.A.D Zephyrus baker-group sobolevnrm zwang friendpine paulschlesinger
	Gapped BLAST and PSI-BLAST: a new generation of protein database search programs. [My Copy] Nucleic acids research, Vol. 25, No. 17. (1 September 1997), pp. 3389-3402. by S. F. Altschul, T. L. Madden, A. A. Schäffer, et al.J. Zhang, Z. Zhang, W. Miller, D. J. Lipman posted by 74 people rshe niallhaslam ucbcjbm timhubbard parnell tfuji maria_hauser jbhiatt yylin mgomes BioNica idoerg pjcite swp09 kgutwin mcbla cpwardell References for 3DSim paper johanviklund daforerog nlapalu sebk tjimenez shung pwais dakelley knaseanka setar iakes miguel kaarsinogen bjorns bicko jmeppley chad_davis balajis nuke2005 eweaver david_parsons indigoviolet dullhunk robert dgront happy_manatee caporaso treangen kengg manzanita CitoJam jdelcampo aengisch rabio massivemayhem mirzazadeh azazello sujaikumar beatrizfernandez GustavoLacerda siebertm adijr viktor21614 EisenLab biomedical-nlp Microbial-Ecology Plantandetc mijam grottenolm bandrewfox edvin newton1234 mariakmejia granujilla marti CharlesM
	Investigation of structure and dynamics in membrane proteins using site-directed spin labeling [My Copy] Current Opinion in Structural Biology, Vol. 4, No. 4. (1994), pp. 566-573. by W. Hubbell, C. Altenbach posted by 4 people yxue leocmcheung EvaKaltenborn viktor21614
	Intrinsic disorder as a mechanism to optimize allosteric coupling in proteins [My Copy] Proceedings of the National Academy of Sciences, Vol. 104, No. 20. (15 May 2007), pp. 8311-8315. by Vincent J. Hilser, E. Brad Thompson posted by 10 people guhjy apaydin barry choonpeng cursonivel1 cactus structural_bioinformatics Bioinformatics cursonivel1 allmensch
	A simple method to predict protein flexibility using secondary chemical shifts. [My Copy] Journal of the American Chemical Society, Vol. 127, No. 43. (2 November 2005), pp. 14970-14971. by Mark V. Berjanskii, David S. Wishart posted by 8 people laurabailey rpetrenko viktor21614 dsekaran apaydin yongzhao allmensch TSRI_MGL
	Long-timescale molecular dynamics simulations of protein structure and function. [My Copy] Current opinion in structural biology, Vol. 19, No. 2. (08 April 2009), pp. 120-127. by John L. Klepeis, Kresten Lindorff-Larsen, Ron O. Dror, David E. Shaw posted by 13 people xdeupi agrossfield allmensch bmduggan r2s2 apaydin kiekyon Borelli idoerg baker-group sobolevnrm edws paulschlesinger
	Lipids and membrane protein structures [My Copy] Current Opinion in Structural Biology, Vol. In Press, Corrected Proof by Carola Hunte, Sebastian Richers posted by 5 people ARobson leocmcheung CameronNeylon paulschlesinger viktor21614
	Lipopeptide detergents for membrane protein studies [My Copy] Current Opinion in Structural Biology, Vol. 19, No. 4. (12 August 2009), pp. 379-385. by Gilbert G. Privé posted by 4 people pjkiley leocmcheung viktor21614 paulschlesinger
	Lipid bilayer structure determined by the simultaneous analysis of neutron and x-ray scattering data [My Copy] Biophys. J. (23 May 2008), biophysj.108.132662. by Norbert Kucerka, John F. Nagle, Jonathan N. Sachs, et al.Scott Feller, Jeremy Pencer, Andrew J. Jackson, John Katsaras posted by 5 people viktor21614 paulschlesinger sobolevnrm baker-group agrossfield
	TALOS+: a hybrid method for predicting protein backbone torsion angles from NMR chemical shifts. [My Copy] Journal of biomolecular NMR, Vol. 44, No. 4. (August 2009), pp. 213-223. by Yang Shen, Frank Delaglio, Gabriel Cornilescu, Ad Bax posted by 5 people dgront laurabailey viktor21614 anna_yershova apaydin
	De Novo Computational Design of Retro-Aldol Enzymes [My Copy] Science, Vol. 319, No. 5868. (7 March 2008), pp. 1387-1391. by Lin Jiang, Eric A. Althoff, Fernando R. Clemente, et al.Lindsey Doyle, Daniela Rothlisberger, Alexandre Zanghellini, Jasmine L. Gallaher, Jamie L. Betker, Fujie Tanaka, Carlos F. Barbas, Donald Hilvert, Kendall N. Houk, Barry L. Stoddard, David Baker posted by 22 people barmak7282 baiaixi fralium Biocatalysis and Biotransformation qbin1304 alexknight barry aalibes jwm aprasad dgront zwang sobolevnrm structural_bioinformatics baker-group davidlott msuarezdiez scienbox ucbcjbm McCammon joseph_x_zhou cambray
	Reassessing a sparse energetic network within a single protein domain [My Copy] Proceedings of the National Academy of Sciences, Vol. 105, No. 12. (25 March 2008), pp. 4679-4684. by Celestine N. Chi, Lisa ElfstrÃ¶m, Yao Shi, Tord SnÃ¤ll, Ãke EngstrÃ¶m, Per Jemth posted by 8 people choonpeng barry apaydin cjeans cactus sunhwan sobolevnrm baker-group
	Transmembrane passage of hydrophobic compounds through a protein channel wall [My Copy] Nature (01 February 2009) by Elizabeth M. Hearn, Dimki R. Patel, Bryan W. Lepore, Mridhu Indic, Bert van den Berg posted by 4 people bratwurst kshundyak paulschlesinger viktor21614
	Structure and Dynamics of Membrane Proteins by Magic Angle Spinning Solid-State NMR [My Copy] Annual Review of Biophysics, Vol. 38, No. 1. (2009), pp. 385-403. by Ann McDermott posted by 5 people agrossfield andreasauerwein leocmcheung zwang viktor21614
	The CCPN data model for NMR spectroscopy: Development of a software pipeline [My Copy] Proteins: Structure, Function, and Bioinformatics, Vol. 59, No. 4. (1 June 2005), pp. 687-696. by Wim F. Vranken, Wayne Boucher, Tim J. Stevens, et al.Rasmus H. Fogh, Anne Pajon, Miguel Llinas, Eldon L. Ulrich, John L. Markley, John Ionides, Ernest D. Laue posted by 3 people viktor21614 leocmcheung laurabailey
	Biophysical characterization of intrinsically disordered proteins. [My Copy] Current opinion in structural biology, Vol. 19, No. 1. (21 February 2009), pp. 23-30. by D. Eliezer posted by 7 people sobolevnrm girayenkavi flbarroso laurenm baker-group paulschlesinger viktor21614
	Atomic-level characterization of disordered protein ensembles [My Copy] Current Opinion in Structural Biology In Folding and binding / Protein-nucleic interactions, Vol. 17, No. 1. (February 2007), pp. 3-14. by Tanja Mittag, Julie D. Forman-Kay posted by 8 people yxue flbarroso apaydin xdeupi cactus LabCompMed biehl allmensch
	Protein-protein interactions: a review of protein dimer structures. [My Copy] Prog Biophys Mol Biol, Vol. 63, No. 1. (1995), pp. 31-65. by S. Jones, J. M. Thornton posted by 10 people viktor21614 bicko barry chad_davis joergkurtwegner structural_bioinformatics Bioinformatics Molecular-Modelling Drug-Design Cheminformatics
	Protein Side-Chain Dynamics As Observed by Solution- and Solid-State NMR Spectroscopy: A Similarity Revealed [My Copy] Journal of the American Chemical Society, Vol. 130, No. 49. (10 December 2008), pp. 16611-16621. by Vipin Agarwal, Yi Xue, Bernd Reif, Nikolai R. Skrynnikov posted by 3 people yxue mkrishna viktor21614
	T-Coffee: A novel method for fast and accurate multiple sequence alignment. [My Copy] Journal of molecular biology, Vol. 302, No. 1. (8 September 2000), pp. 205-217. by C. Notredame, D. G. Higgins, J. Heringa posted by 19 people bratwurst viktor21614 tomjad robert laurabailey medic0747 BioNica sebk miguel dayjm indigoviolet ffranca treangen Haggan siebertm adijr EisenLab marti newton1234
	Predicting Allosteric Communication in Myosin via a Pathway ofConserved Residues [My Copy] Journal of Molecular Biology, Vol. In Press, Accepted Manuscript by Susan Tang, Jung-Chi Liao, Alexander R. Dunn, Russ B. Altman, James A. Spudich, Jeanette P. Schmidt posted by 8 people barry choonpeng cactus sobolevnrm jlh64 structural_bioinformatics baker-group melting
	Discovering High-Affinity Ligands for Proteins: SAR by NMR [My Copy] Science, Vol. 274, No. 5292. (29 November 1996), pp. 1531-1534. by Suzanne B. Shuker, Philip J. Hajduk, Robert P. Meadows, Stephen W. Fesik posted by 8 people ubcg08l mkrishna dgruiz apaydin caporaso cjeans viktor21614 biomedical-nlp
	Open source tools and toolkits for bioinformatics: significance, and where are we? [My Copy] Brief Bioinform, Vol. 7, No. 3. (September 2006), pp. 287-296. by J. E. Stajich, H. Lapp posted by 18 people kiekyon kshameer Cortel Vincent_Rouilly daforerog druvus viktor21614 krapnik Ayest yas eweaver indigoviolet moborg dgront stajich george_g EisenLab T_lab
	A Systematic Methodology for Defining Coarse-Grained Sites in Large Biomolecules [My Copy] Biophysical Journal, Vol. 95, No. 11. (01 December 2008), pp. 5073-5083. by Z. Zhang, L. Lu, W. Noid, V. Krishna, J. Pfaendtner, G. Voth posted by 8 people okapi structural_bioinformatics McCammon barry sobolevnrm choonpeng agrossfield paulschlesinger
	CONFORMATIONAL TRANSITION PATHWAYS EXPLORED BY MONTE CARLO SIMULATION INTEGRATED WITH COLLECTIVE MODES [My Copy] Biophys. J. (1 August 2008), biophysj.107.128447. by Nigar Kantarci-Carsibasi, Turkan Haliloglu, Pemra Doruker posted by 7 people baker-group sobolevnrm paulschlesinger oteri viktor21614 sunhwan aqeel
	Oligomeric Structure, Dynamics, and Orientation of Membrane Proteins from Solid-State NMR [My Copy] Structure, Vol. 14, No. 12. (December 2006), pp. 1731-1740. by Mei Hong posted by 4 people girayenkavi dgront viktor21614 EvaKaltenborn
	Allostery: Absence of a Change in Shape Does Not Imply that Allostery Is Not at Play. [My Copy] J Mol Biol (29 February 2008) by Chung-Jung J. Tsai, Antonio Del Sol, Ruth Nussinov posted by 11 people pablocarb barry choonpeng cactus sobolevnrm CameronNeylon structural_bioinformatics higueruelo McCammon Chang group cchang
	Intrinsic dynamics of enzymes in the unbound state and relation to allosteric regulation [My Copy] Current Opinion in Structural Biology In Catalysis and regulation / Proteins, Vol. 17, No. 6. (December 2007), pp. 633-640. by Ivet Bahar, Chakra Chennubhotla, Dror Tobi posted by 15 people allmensch jrperillaj barry aqeel ruvido cactus sobolevnrm structural_bioinformatics Bioinformatics baker-group jennifermbui higueruelo LamBras jmccammon McCammon
	Comparison of multiple Amber force fields and development of improved protein backbone parameters. [My Copy] Proteins, Vol. 65, No. 3. (15 November 2006), pp. 712-725. by Viktor Hornak, Robert Abel, Asim Okur, Bentley Strockbine, Adrian Roitberg, Carlos Simmerling posted by 11 people arnaucordomi Vadikus bmduggan baaden lna allmensch choonpeng kazemi barry GermanErlenkamp RamuAnandakrishnan
	Structural and dynamic studies of proteins by solid-state NMR spectroscopy: rapid movement forward [My Copy] Current Opinion in Structural Biology, Vol. 14, No. 5. (October 2004), pp. 554-561. by Ann E. Mcdermott posted by 2 people viktor21614 yxue
	Statistical coil model of the unfolded state: Resolving the reconciliation problem [My Copy] Proceedings of the National Academy of Sciences of the United States of America, Vol. 102, No. 37. (13 September 2005), pp. 13099-13104. by Abhishek K. Jha, Andrés Colubri, Karl F. Freed, Tobin R. Sosnick posted by 4 people yxue apaydin choonpeng allmensch
	Scalable molecular dynamics with NAMD [My Copy] Journal of Computational Chemistry, Vol. 26, No. 16. (December 2005), pp. 1781-1802. by James C. Phillips, Rosemary Braun, Wei Wang, et al.James Gumbart, Emad Tajkhorshid, Elizabeth Villa, Christophe Chipot, Robert D. Skeel, Laxmikant Kalé, Klaus Schulten posted by 26 people krapnik pjkiley flbarroso yxue r2s2 grondina rpetrenko oteri oceanwind dfgreen vahmurk gisle dimka jwm ttjoseph sangeetha yoel_rf bilab wilsoros sobolevnrm Radiation_Damage Stressosome Bioinformatics insilicodrug baker-group ibuch
	Large-scale allosteric conformational transitions of adenylate kinase appear to involve a population-shift mechanism. [My Copy] Proceedings of the National Academy of Sciences of the United States of America, Vol. 104, No. 47. (20 November 2007), pp. 18496-18501. by Karunesh Arora, Charles L. Brooks posted by 10 people xdeupi jrperillaj barry allmensch cactus sobolevnrm jlh64 structural_bioinformatics baker-group karunesh
	The structure and function of G-protein-coupled receptors [My Copy] Nature, Vol. 459, No. 7245. (20 May 2009), pp. 356-363. by Daniel M. Rosenbaum, Soren G. F. Rasmussen, Brian K. Kobilka posted by 9 people diod guhjy viktor21614 agrossfield patricia xdeupi akundaje hsekiguc barry
	The Mechanism of Detergent Solubilization of Liposomes and Protein-Containing Membranes [My Copy] Biophys. J., Vol. 75, No. 6. (1 December 1998), pp. 2932-2946. by Ulrich Kragh-Hansen, Le, Jesper V. Moller posted by 3 people paulschlesinger viktor21614 EvaKaltenborn
	Intrinsic motions along an enzymatic reaction trajectory. [My Copy] Nature, Vol. 450, No. 7171. (6 December 2007), pp. 838-844. by Katherine A. Henzler-Wildman, Vu Thai, Ming Lei, et al.Maria Ott, Magnus Wolf-Watz, Tim Fenn, Ed Pozharski, Mark A. Wilson, Gregory A. Petsko, Martin Karplus, Christian G. Hübner, Dorothee Kern posted by 14 people saravan ahmetbakan xdeupi ubcg08l ruvido barry aqeel ebeutler cactus sobolevnrm paulschlesinger jlh64 baker-group yalexeev
	Fragment Ranking in Modelling of Protein Structure : Conformationally Constrained Environmental Amino Acid Substitution Tables [My Copy] Journal of Molecular Biology, Vol. 229, No. 1. (5 January 1993), pp. 194-220. by Christopher M. Topham, Alasdair Mcleod, Frank Eisenmenger, John P. Overington, Mark S. Johnson, Tom L. Blundell posted by 6 people viktor21614 bicko vavi dgront medic0747 sebk
	Protein Dynamism and Evolvability [My Copy] Science, Vol. 324, No. 5924. (10 April 2009), pp. 203-207. by Nobuhiko Tokuriki, Dan S. Tawfik posted by 23 people tomhebbron anuragsethi ahmetbakan kevinchannon klexa lauresultan dbikard ibuch ramiro2k structural_bioinformatics McCammon barry pablocarb ramanuja baker-group sobolevnrm biomcgary hsekiguc VGreiff phoenixzxl zwang jdoconnell paulschlesinger
	Dynamic energy landscape view of coupled binding and protein conformational change: Induced-fit versus population-shift mechanisms [My Copy] Proceedings of the National Academy of Sciences, Vol. 105, No. 32. (12 August 2008), pp. 11182-11187. by Kei-ichi Okazaki, Shoji Takada posted by 11 people oteri bmduggan xdeupi okapi aqeel raik ruvido structural_bioinformatics McCammon barry zwang
	REACH Coarse-Grained Biomolecular Simulation: Transferability between Different Protein Structural Classes [My Copy] Biophys. J. (9 May 2008), biophysj.108.131714. by Kei Moritsugu, Jeremy C. Smith posted by 10 people barry baker-group sobolevnrm A_Coletta_Thesis paulschlesinger choonpeng aqeel jmccammon McCammon rok
	The 13C Chemical-Shift Index: A simple method for the identification of protein secondary structure using 13C chemical-shift data [My Copy] Journal of Biomolecular NMR, Vol. 4, No. 2. (1 March 1994), pp. 171-180. by David S. Wishart, Brian D. Sykes posted by 3 people viktor21614 laurenm apaydin
	How intramembrane proteases bury hydrolytic reactions in the membrane [My Copy] Nature, Vol. 459, No. 7245. (20 May 2009), pp. 371-378. by Elinor Erez, Deborah Fass, Eitan Bibi posted by 3 people viktor21614 hsekiguc paulschlesinger
	Tuning Escherichia coli for membrane protein overexpression. [My Copy] Proceedings of the National Academy of Sciences of the United States of America, Vol. 105, No. 38. (23 September 2008), pp. 14371-14376. by Samuel Wagner, Mirjam M. Klepsch, Susan Schlegel, et al.Ansgar Appel, Roger Draheim, Michael Tarry, Martin Högbom, Klaas J. van Wijk, Dirk J. Slotboom, Jan O. Persson, Jan-Willem W. de Gier posted by 3 people martainn leocmcheung viktor21614
	Characterization of Ligand Binding by Saturation Transfer Difference NMR Spectroscopy [My Copy] Angewandte Chemie International Edition, Vol. 38, No. 12. (1999), pp. 1784-1788. by Moriz Mayer, Bernd Meyer posted by 2 people bmduggan viktor21614
	Group Epitope Mapping by Saturation Transfer Difference NMR To Identify Segments of a Ligand in Direct Contact with a Protein Receptor [My Copy] J. Am. Chem. Soc., Vol. 123, No. 25. (27 June 2001), pp. 6108-6117. by M. Mayer, B. Meyer posted by 2 people bmduggan viktor21614
	Allosteric Communication Occurs via Networks of Tertiary and Quaternary Motions in Proteins [My Copy] PLoS Comput Biol, Vol. 5, No. 2. (20 February 2009), e1000293. by Michael D. Daily, Jeffrey J. Gray posted by 13 people anuragsethi skywalkerus02 baker-group sobolevnrm pablocarb AngelB eallain allmensch gane5h apaydin structural_bioinformatics McCammon barry
	Multidimensional solid state NMR of anisotropic interactions in peptides and proteins [My Copy] The Journal of Chemical Physics, Vol. 128, No. 5. (2008) by Benjamin J. Wylie, Chad M. Rienstra posted by 2 people dgront viktor21614
	Cα and Cβ Carbon-13 Chemical Shifts in Proteins From an Empirical Database [My Copy] Journal of Biomolecular NMR, Vol. 13, No. 3. (1 March 1999), pp. 199-211. by Mitsuo Iwadate, Tetsuo Asakura, Michael P. Williamson posted by 2 people apaydin viktor21614
	CheckShift improved: fast chemical shift reference correction with high accuracy [My Copy] Journal of Biomolecular NMR by Simon Ginzinger, Marko Skočibušić, Volker Heun posted by 2 people viktor21614 apaydin
	X-ray solution scattering (SAXS) combined with crystallography and computation: defining accurate macromolecular structures, conformations and assemblies in solution [My Copy] Quarterly Reviews of Biophysics, Vol. 40, No. 03. (14 August 2007), pp. 191-285. by Christopher D. Putnam, Michal Hammel, Greg L. Hura, John A. Tainer posted by 5 people paulschlesinger dgront bratwurst birte ColumbusLabs
	GeNMR: a web server for rapid NMR-based protein structure determination. [My Copy] Nucleic acids research, Vol. 37, No. Web Server issue. (1 July 2009) by M. Berjanskii, P. Tang, J. Liang, et al.J. A. Cruz, J. Zhou, Y. Zhou, E. Bassett, C. MacDonell, P. Lu, G. Lin, D. S. Wishart posted by 3 people nuin viktor21614 apaydin
	Auto-induction medium for the production of [U-15N]- and [U-13C, U-15N]-labeled proteins for NMR screening and structure determination. [My Copy] Protein expression and purification, Vol. 40, No. 2. (April 2005), pp. 268-278. by Robert C. Tyler, Hassan K. Sreenath, Shanteri Singh, et al.David J. Aceti, Craig A. Bingman, John L. Markley, Brian G. Fox posted by 3 people viktor21614 Aqua bmduggan
	Core principles of intramembrane proteolysis: comparison of rhomboid and site-2 family proteases [My Copy] Current Opinion in Structural Biology, Vol. In Press, Corrected Proof by Sinisa Urban, Yigong Shi posted by 3 people tomhebbron paulschlesinger viktor21614
	Solution NMR of membrane proteins in bilayer mimics: Small is beautiful, but sometimes bigger is better [My Copy] Biochimica et Biophysica Acta (BBA) - Biomembranes, Vol. 1768, No. 12. (20 December 2007), pp. 3098-3106. by S. Poget, M. Girvin posted by 2 people leocmcheung viktor21614
	Surface Sites for Engineering Allosteric Control in Proteins [My Copy] Science, Vol. 322, No. 5900. (17 October 2008), pp. 438-442. by Jeeyeon Lee, Madhusudan Natarajan, Vishal C. Nashine, et al.Michael Socolich, Tina Vo, William P. Russ, Stephen J. Benkovic, Rama Ranganathan posted by 12 people baker-group sobolevnrm jbhiatt lflorez cactus marck i000 structural_bioinformatics McCammon Bioinformatics barry paulschlesinger
	Chain-melting phase transition and short-range molecular interactions in phospholipid foam bilayers [My Copy] Advances in Colloid and Interface Science, Vol. 96, No. 1-3. (25 February 2002), pp. 75-100. by Dotchi Exerowa posted by 2 people paulschlesinger viktor21614
	Recent advances in site-directed spin labeling of proteins [My Copy] Current Opinion in Structural Biology, Vol. 8, No. 5. (October 1998), pp. 649-656. by Wayne L. Hubbell, Adrian Gross, Ralf Langen, Michael A. Lietzow posted by 2 people leocmcheung viktor21614
	Mixing and Matching Detergents for Membrane Protein NMR Structure Determination [My Copy] Journal of the American Chemical Society, Vol. 131, No. 21. (3 June 2009), pp. 7320-7326. by Linda Columbus, Jan Lipfert, Kalyani Jambunathan, et al.Daniel A. Fox, Adelene Y. L. Sim, Sebastian Doniach, Scott A. Lesley posted by 2 people ColumbusLabs viktor21614
	Long-range distance determinations in biomacromolecules by EPR spectroscopy [My Copy] Quarterly Reviews of Biophysics, Vol. 40, No. 01. (2007), pp. 1-53. by Olav Schiemann, Thomas F. Prisner posted by 2 people viktor21614 ColumbusLabs
	Association energetics of membrane spanning [alpha]-helices [My Copy] Current Opinion in Structural Biology, Vol. In Press, Corrected Proof by Kevin R. Mackenzie, Karen G. Fleming posted by 2 people paulschlesinger viktor21614
	The assembly of membrane proteins into complexes [My Copy] Current Opinion in Structural Biology, Vol. In Press, Corrected Proof by Daniel O. Daley posted by 2 people paulschlesinger viktor21614
	Isotropic Bicelles Stabilize the Functional Form of a Small Multidrug-Resistance Pump for NMR Structural Studies [My Copy] Journal of the American Chemical Society, Vol. 129, No. 9. (1 March 2007), pp. 2432-2433. by Sebastien F. Poget, Sean M. Cahill, Mark E. Girvin posted by 3 people leocmcheung MarkBostock viktor21614
	Nitrogen-14 solid-state NMR spectroscopy of aligned phospholipid bilayers to probe peptide-lipid interaction and oligomerization of membrane associated peptides. [My Copy] Journal of the American Chemical Society, Vol. 130, No. 33. (20 August 2008), pp. 11023-11029. by A. Ramamoorthy, D. K. Lee, J. S. Santos, K. A. Henzler-Wildman posted by 2 people viktor21614 paulschlesinger
	Mapping protein–protein interaction by 13C′-detected heteronuclear NMR spectroscopy [My Copy] Journal of Biomolecular NMR, Vol. 36, No. 2. (1 October 2006), pp. 111-122. by Ivano Bertini, Isabella Felli, Leonardo Gonnelli, Roberta Pierattelli, Zinovia Spyranti, Georgios Spyroulias posted by 2 people ColumbusLabs viktor21614
	Voltage-gated proton channels and other proton transfer pathways. [My Copy] Physiological reviews, Vol. 83, No. 2. (1 April 2003), pp. 475-579. by Thomas E. Decoursey posted by 3 people paulschlesinger viktor21614 skukolja
	Protein folding: lessons learned and new frontiers [My Copy] Phys. Biol., Vol. 6, No. 1. (March 2009), 010301. by Rohit V. Pappu, Ruth Nussinov posted by 5 people barry VGreiff baker-group sobolevnrm viktor21614
	Principles of docking: An overview of search algorithms and a guide to scoring functions. [My Copy] Proteins, Vol. 47, No. 4. (1 June 2002), pp. 409-443. by Inbal Halperin, Buyong Ma, Haim Wolfson, Ruth Nussinov posted by 30 people rabio ucbcjbm flbarroso csrocha Structural Biology Group TorVergata oteri timg dgruiz cantupaz apaydin bicko chad_davis yongzhao ttjoseph nickolay ima sangeetha dgront blackbart gane5h mmuecke kazemi bpagano massivemayhem cjeans Bioinformatics TSRI_MGL insilicodrug Evangelia nigham
	Automated structure determination from NMR spectra [My Copy] European Biophysics Journal, Vol. 38, No. 2. (1 February 2009), pp. 129-143. by Peter Güntert posted by 4 people dgront lna bmduggan apaydin
	Structural systems biology: modelling protein interactions. [My Copy] Nature reviews. Molecular cell biology, Vol. 7, No. 3. (March 2006), pp. 188-197. by Patrick Aloy, Robert B. Russell posted by 28 people flbarroso timg chica Scis0000002 ubcg08l ana aalibes bicko xico dgront drastic choonpeng henschel ruvido massivemayhem cat_worth fishtank iris_2001 gvuister lpfernandes structural_bioinformatics Bioinformatics WetBiology Evangelia andreas_foersch higueruelo chad_davis jteyra
	A minimalist network model for coarse-grained normal mode analysis and its application to biomolecular x-ray crystallography. [My Copy] Proceedings of the National Academy of Sciences of the United States of America (1 October 2008) by Mingyang Lu, Jianpeng Ma posted by 12 people baker-group sobolevnrm aqeel apaydin ruvido agrossfield Nielsen group skoddet structural_bioinformatics McCammon Bioinformatics barry
	BIND: the Biomolecular Interaction Network Database. [My Copy] Nucleic acids research, Vol. 31, No. 1. (1 January 2003), pp. 248-250. by Gary D. Bader, Doron Betel, Christopher W. Hogue posted by 12 people bertelsen web03 viktor21614 okarsligil lfriedl chad_davis dullhunk gurkanbebek kdl Bioinformatics dragonrez bicko
	Protein backbone angle restraints from searching a database for chemical shift and sequence homology [My Copy] Journal of Biomolecular NMR, Vol. 13, No. 3. (1 March 1999), pp. 289-302. by Gabriel Cornilescu, Frank Delaglio, Ad Bax posted by 3 people kumar_physics viktor21614 laurabailey
	Structural symmetry and protein function. [My Copy] Annu Rev Biophys Biomol Struct, Vol. 29 (2000), pp. 105-153. by D. S. Goodsell, A. J. Olson posted by 3 people viktor21614 bicko cactus
	Emerging roles for lipids in shaping membrane-protein function [My Copy] Nature, Vol. 459, No. 7245. (20 May 2009), pp. 379-385. by Rob Phillips, Tristan Ursell, Paul Wiggins, Pierre Sens posted by 9 people girayenkavi viktor21614 agrossfield cjryan kevinchannon hsekiguc baker-group sobolevnrm nelfarargy
	Investigating protein dynamics in collective coordinate space [My Copy] Current Opinion in Structural Biology, Vol. 9, No. 2. (April 1999), pp. 164-169. by A. Kitao, N. Go posted by 8 people bmduggan Scis0000002 ttjoseph ffranca barry choonpeng sobolevnrm baker-group
	GROMACS 4: Algorithms for Highly Efficient, Load-Balanced, and Scalable Molecular Simulation [My Copy] Journal of Chemical Theory and Computation, Vol. 4, No. 3. (1 March 2008), pp. 435-447. by Berk Hess, Carsten Kutzner, David van der Spoel, Erik Lindahl posted by 25 people softsimu parnell rabio oteri krapnik robertvacha rodrigofaccioli pavanghatty janneb ZhangYinhe okapi flbarroso marceavi Structural Biology Group TorVergata A_Coletta_Thesis choonpeng Lombardo_7 jwm daevans mmuecke sobolevnrm baker-group r2s2 middledomain loison
	Transition networks for modeling the kinetics of conformational change in macromolecules [My Copy] Current Opinion in Structural Biology In Theory and simulation / Macromolecular assemblages, Vol. 18, No. 2. (April 2008), pp. 154-162. by Frank Noé, Stefan Fischer posted by 9 people Diego_Prada aqeel barry sobolevnrm structural_bioinformatics baker-group paulschlesinger McCammon toerst
	Is There a Preferential Interaction between Cholesterol and Tryptophan Residues in Membrane Proteins? [My Copy] Biochemistry, Vol. 47, No. 8. (26 February 2008), pp. 2638-2649. by A. Holt, R. F. M. Dealmeida, T. K. M. Nyholm, et al.L. M. S. Loura, A. E. Daily, R. W. H. M. Staffhorst, D. T. S. Rijkers, R. E. Koeppe, M. Prieto, J. A. Killian posted by 3 people sobolevnrm baker-group viktor21614
	Wordom: a program for efficient analysis of molecular dynamics simulations [My Copy] Bioinformatics, Vol. 23, No. 19. (1 October 2007), pp. 2625-2627. by Michele Seeber, Marco Cecchini, Francesco Rao, Giovanni Settanni, Amedeo Caflisch posted by 9 people guhjy barry tmmurali choonpeng hmk sobolevnrm structural_bioinformatics baker-group LamBras
	Basic local alignment search tool. [My Copy] Journal of molecular biology, Vol. 215, No. 3. (5 October 1990), pp. 403-410. by S. F. Altschul, W. Gish, W. Miller, E. W. Myers, D. J. Lipman posted by 84 people VGreiff richter80 krapnik azazello rshe mtaschuk sjcockell niallhaslam djohnson thegoose humburg timhubbard pachorip n00c maria_hauser rpetrenko parnell yylin esyoun APRegier idoerg Neeperando robert85 thegoose2 daforerog mcbla coela alessandroparini bertelsen Blackbeard florisbuijzen laurabailey treangen pwais mmartin C. elegans / WormBase tharris dmp camster davidng evaf dragonrez jwm jmeppley Ayest RMGraze ea yas balajis alexg indigoviolet moborg arcticrasta dullhunk dgront caporaso michC myui BioNica CitoJam rabio timflutre lusk cjeans incovoma beatrizfernandez wenhan jtomasch GustavoLacerda sgoetz siebertm ichbins81 jofiel dbk-lab EisenLab T_lab biomedical-nlp Microbial-Ecology Thaverkamp shung marti ashaytan benwei granujilla
	Structure validation by Calpha geometry: &phis;,psi and Cbeta deviation [My Copy] Proteins: Structure, Function, and Genetics, Vol. 50, No. 3. (15 February 2003), pp. 437-450. by Simon C. Lovell, Ian W. Davis, W. Bryan Arendall, et al.Paul I. W. de Bakker, J. Michael Word, Michael G. Prisant, Jane S. Richardson, David C. Richardson posted by 12 people Diego_Prada bmduggan aqeel jwm robert dgront xiaobeizhao martainn Radiation_Damage Stressosome mijam pavanghatty
	Improved sampling methods for molecular simulation. [My Copy] Curr Opin Struct Biol, Vol. 17, No. 2. (April 2007), pp. 187-191. by H. Lei, Y. Duan posted by 4 people viktor21614 aqeel BragilMassoud allmensch
	Progress in Modeling of Protein Structures and Interactions [My Copy] Science, Vol. 310, No. 5748. (28 October 2005), pp. 638-642. by Ora Schueler-Furman, Chu Wang, Phil Bradley, Kira Misura, David Baker posted by 22 people krapnik rabio ucbcjbm paddydu flbarroso thaliana jwm vavi bicko KyuhoLee marcius eweaver tny nickolay dgront rsantana mirzazadeh insectopalo BioinfoCIPF SGU-CIPF barry structural_bioinformatics
	Kemp elimination catalysts by computational enzyme design [My Copy] Nature, Vol. 453, No. 7192. (19 March 2008), pp. 190-195. by Daniela Rothlisberger, Olga Khersonsky, Andrew M. Wollacott, et al.Lin Jiang, Jason DeChancie, Jamie Betker, Jasmine L. Gallaher, Eric A. Althoff, Alexandre Zanghellini, Orly Dym, Shira Albeck, Kendall N. Houk, Dan S. Tawfik, David Baker posted by 16 people barmak7282 baiaixi Jiang Research Group whitead Biocatalysis and Biotransformation qbin1304 fralium Diego_Prada apaydin jwm msuarezdiez austin cactus neils sobolevnrm baker-group
	Characterization of Protein Conformational States by Normal-Mode Frequencies [My Copy] J. Am. Chem. Soc. (23 August 2007) by B. A. Hall, S. L. Kaye, A. Pang, R. Perera, P. C. Biggin posted by 11 people Diego_Prada Scis0000002 ubcg08l barry aqeel choonpeng sobolevnrm structural_bioinformatics Bioinformatics baker-group LamBras
	Structural specificity in coiled-coil interactions [My Copy] Current Opinion in Structural Biology, Vol. In Press, Corrected Proof by Gevorg Grigoryan, Amy E. Keating posted by 9 people martainn kgutwin LOX-1 Receptor oteri markchen phoenixzxl marck zwang viktor21614
	An integrated cell-free metabolic platform for protein production and synthetic biology. [My Copy] Molecular systems biology, Vol. 4 (14 October 2008) by Michael C. Jewett, Kara A. Calhoun, Alexei Voloshin, Jessica J. Wuu, James R. Swartz posted by 5 people raik pengchy grahamc viktor21614 zwang
	Quantifying allosteric effects in proteins [My Copy] Proteins: Structure, Function, and Bioinformatics, Vol. 59, No. 4. (01 June 2005), pp. 697-707. by Dengming Ming, Michael E. Wall posted by 7 people edws apaydin lna aqeel choonpeng ruvido cactus
	New Tools Provide New Insights in NMR Studies of Protein Dynamics [My Copy] Science, Vol. 312, No. 5771. (14 April 2006), pp. 224-228. by Anthony Mittermaier, Lewis E. Kay posted by 6 people xdeupi bmduggan apaydin lna aqeel laurabailey
	Convergence and combination of methods in protein–protein docking [My Copy] Current Opinion in Structural Biology, Vol. 19, No. 2. (25 April 2009), pp. 164-170. by Sandor Vajda, Dima Kozakov posted by 5 people bmduggan reyez barry zwang paulschlesinger
	Membrane proteins, lipids and detergents: not just a soap opera. [My Copy] Biochimica et biophysica acta In Lipid-Protein Interactions, Vol. 1666, No. 1-2. (3 November 2004), pp. 105-117. by A. M. Seddon, P. Curnow, P. J. Booth posted by 3 people MuraLab Odi viktor21614
	Ten thousand interactions for the molecular biologist [My Copy] Nature Biotechnology, Vol. 22, No. 10. (06 October 2004), pp. 1317-1321. by Patrick Aloy, Robert B. Russell posted by 17 people krapnik ucbcjbm flbarroso mikaellund baaden jwm bicko chad_davis dullhunk dgront drastic ruvido Radiation_Damage Stressosome Evangelia higueruelo timg
	Intrinsically unstructured proteins and their functions [My Copy] Nature Reviews Molecular Cell Biology, Vol. 6, No. 3. (01 March 2005), pp. 197-208. by H. Jane Dyson, Peter E. Wright posted by 6 people danieladirndorfer yxue hsekiguc cactus paulschlesinger Evangelia
	Investigating transport proteins by solid state NMR. [My Copy] Naunyn Schmiedebergs Arch Pharmacol (28 February 2006) by Daniel Basting, Ines Lehner, Mark Lorch, Clemens Glaubitz posted by 3 people laurabailey InesLehner viktor21614