rpsimmonsin's Top Recommendations

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	Antibody-dependent cell-mediated cytotoxic responses in participants enrolled in a phase III ALVAC-HIVAIDSVAX B/E prime-boost HIV-1 vaccine trial in Thailand [My Copy] Vaccine, Vol. 23, No. 19. (31 March 2005), pp. 2522-2529. by C KARNASUTA,, R PARIS,, J COX,, et al.S NITAYAPHAN,, P PITISUTTITHUM,, P THONGCHAROEN,, A BROWN,, S GURUNATHAN,, J TARTAGLIA,, W HEYWARD, posted by 1 person peterbgilbert
	Predicting Protein-Peptide Binding Affinity by Learning Peptide-Peptide Distance Functions [My Copy] Research in Computational Molecular Biology (2005), pp. 456-471. by Chen Yanover, Tomer Hertz posted by 1 person peterbgilbert
	Vaccines: Correlates of Vaccine‐Induced Immunity [My Copy] Clinical Infectious Diseases, Vol. 47, No. 3. (1 August 2008), pp. 401-409. by Stanley a Plotkin posted by 1 person peterbgilbert
	Effective, low-titer antibody protection against low-dose repeated mucosal SHIV challenge in macaques [My Copy] Nat Med, Vol. 15, No. 8. (August 2009), pp. 951-954. by Ann J. Hessell, Pascal Poignard, Meredith Hunter, et al.Lars Hangartner, David M. Tehrani, Wim K. Bleeker, Paul W. H. I. Parren, Preston A. Marx, Dennis R. Burton posted by 2 people pineapple peterbgilbert
	KIR-HLA intercourse in HIV disease [My Copy] Trends in Microbiology, Vol. 16, No. 12. (December 2008), pp. 620-627. by M. Carrington, M. Martin, J. Vanbergen posted by 1 person peterbgilbert
	The emerging role of innate immunity in protection against HIV-1 infection. [My Copy] Vaccine, Vol. 26, No. 24. (6 June 2008), pp. 2997-3001. by T. Lehner, Y. Wang, J. Pido-Lopez, T. Whittall, L. A. Bergmeier, K. Babaahmady posted by 1 person peterbgilbert
	Mucosal immunity and protection against HIV/SIV infection: strategies and challenges for vaccine design. [My Copy] International reviews of immunology, Vol. 28, No. 1. (2009), pp. 20-48. by Thorsten Demberg, Marjorie Robert-Guroff posted by 1 person peterbgilbert
	Variable Fitness Impact of HIV-1 Escape Mutations to Cytotoxic T Lymphocyte (CTL) Response [My Copy] PLoS Pathog, Vol. 5, No. 4. (3 April 2009), e1000365. by Ryan M. Troyer, John Mcnevin, Yi Liu, et al.Shao C. Zhang, Randall W. Krizan, Awet Abraha, Denis M. Tebit, Hong Zhao, Santiago Avila, Michael A. Lobritz, M. Juliana Mcelrath, Sylvie Le Gall, James I. Mullins, Eric J. Arts posted by 1 person peterbgilbert
	Marked Epitope- and Allele-Specific Differences in Rates of Mutation in Human Immunodeficiency Type 1 (HIV-1) Gag, Pol, and Nef Cytotoxic T-Lymphocyte Epitopes in Acute/Early HIV-1 Infection [My Copy] J. Virol., Vol. 82, No. 18. (15 September 2008), pp. 9216-9227. by Zabrina L. Brumme, Chanson J. Brumme, Jonathan Carlson, et al.Hendrik Streeck, Mina John, Quentin Eichbaum, Brian L. Block, Brett Baker, Carl Kadie, Martin Markowitz, Heiko Jessen, Anthony D. Kelleher, Eric Rosenberg, John Kaldor, Yuko Yuki, Mary Carrington, Todd M. Allen, Simon Mallal, Marcus Altfeld, David Heckerman, Bruce D. Walker posted by 1 person peterbgilbert
	Selective Escape from CD8+ T-Cell Responses Represents a Major Driving Force of Human Immunodeficiency Virus Type 1 (HIV-1) Sequence Diversity and Reveals Constraints on HIV-1 Evolution [My Copy] J. Virol., Vol. 79, No. 21. (1 November 2005), pp. 13239-13249. by Todd M. Allen, Marcus Altfeld, Shaun C. Geer, et al.Elizabeth T. Kalife, Corey Moore, Kristin M. O'Sullivan, Ivna Desouza, Margaret E. Feeney, Robert L. Eldridge, Erica L. Maier, Daniel E. Kaufmann, Matthew P. Lahaie, Laura Reyor, Giancarlo Tanzi, Mary N. Johnston, Christian Brander, Rika Draenert, Jurgen K. Rockstroh, Heiko Jessen, Eric S. Rosenberg, Simon A. Mallal, Bruce D. Walker posted by 1 person peterbgilbert
	Escape from the Dominant HLA-B27-Restricted Cytotoxic T-Lymphocyte Response in Gag Is Associated with a Dramatic Reduction in Human Immunodeficiency Virus Type 1 Replication [My Copy] J. Virol., Vol. 81, No. 22. (15 November 2007), pp. 12382-12393. by Arne Schneidewind, Mark A. Brockman, Ruifeng Yang, et al.Rahma I. Adam, Bin Li, Sylvie Le Gall, Charles R. Rinaldo, Sharon L. Craggs, Rachel L. Allgaier, Karen A. Power, Thomas Kuntzen, Chang-Shung Tung, Montiago X. Labute, Sandra M. Mueller, Thomas Harrer, Andrew J. Mcmichael, Philip J. R. Goulder, Christopher Aiken, Christian Brander, Anthony D. Kelleher, Todd M. Allen posted by 1 person peterbgilbert
	Fitness Cost of Escape Mutations in p24 Gag in Association with Control of Human Immunodeficiency Virus Type 1 [My Copy] J. Virol., Vol. 80, No. 7. (1 April 2006), pp. 3617-3623. by Javier Martinez-Picado, Julia G. Prado, Elizabeth E. Fry, et al.Katja Pfafferott, Alasdair Leslie, Senica Chetty, Christina Thobakgale, Isobel Honeyborne, Hayley Crawford, Philippa Matthews, Tilly Pillay, Christine Rousseau, James I. Mullins, Christian Brander, Bruce D. Walker, David I. Stuart, Photini Kiepiela, Philip Goulder posted by 1 person peterbgilbert
	Extensive HLA class I allele promiscuity among viral CTL epitopes [My Copy] European Journal of Immunology, Vol. 37, No. 9. (2007), pp. 2419-2433. by Nicole Frahm, Karina Yusim, Todd j, et al.Sharon Adams, John Sidney, Peter Hraber, Hannah s, Caitlyn h, Daniel g, Tonia Woodberry, Leah m, Kellie Faircloth, Jennifer Listgarten, Carl Kadie, Nebojsa Jojic, Kaori Sango, Nancy v, Eunice Pae, M. . Tauheed Zaman, Florian Bihl, Ashok Khatri, Mina John, Simon Mallal, Francesco m, Bruce d, Alessandro Sette, David Heckerman, Bette t, Christian Brander posted by 1 person peterbgilbert
	Comprehensive analysis of T cell epitope discovery strategies using 17DD yellow fever virus structural proteins and BALB/c (H2d) mice model [My Copy] Virology, Vol. 378, No. 1. (15 August 2008), pp. 105-117. by M. Macieljr posted by 1 person peterbgilbert
	On goodness-of-fit for the linear transformation and frailty models [My Copy] Statistics & Probability Letters, Vol. 47, No. 2. (1 April 2000), pp. 177-188. by V. Bagdonavicius posted by 1 person peterbgilbert
	Differential neutralization of human immunodeficiency virus (HIV) replication in autologous CD4 T cells by HIV-specific cytotoxic T lymphocytes. [My Copy] Journal of virology, Vol. 83, No. 7. (1 April 2009), pp. 3138-3149. by Huabiao Chen, Alicja Piechocka-Trocha, Toshiyuki Miura, et al.Mark A. Brockman, Boris D. Julg, Brett M. Baker, Alissa C. Rothchild, Brian L. Block, Arne Schneidewind, Tomohiko Koibuchi, Florencia Pereyra, Todd M. Allen, Bruce D. Walker posted by 3 people peterbgilbert Oxford Virology wsjames
	Immunomic analysis of the repertoire of T-cell specificities for influenza A virus in humans. [My Copy] Journal of virology, Vol. 82, No. 24. (15 December 2008), pp. 12241-12251. by E. Assarsson, H. H. Bui, J. Sidney, et al.Q. Zhang, J. Glenn, C. Oseroff, I. N. Mbawuike, J. Alexander, M. J. Newman, H. Grey, A. Sette posted by 2 people peterbgilbert zwang
	Lytic granule loading of CD8+ T cells is required for HIV-infected cell elimination associated with immune control. [My Copy] Immunity, Vol. 29, No. 6. (19 December 2008), pp. 1009-1021. by Stephen A. Migueles, Christine M. Osborne, Cassandra Royce, et al.Alex A. Compton, Rohan P. Joshi, Kristin A. Weeks, Julia E. Rood, Amy M. Berkley, Jonah B. Sacha, Nancy A. Cogliano-Shutta, Margaret Lloyd, Gregg Roby, Richard Kwan, Mary McLaughlin, Sara Stallings, Catherine Rehm, Marie A. O'Shea, JoAnn Mican, Beverly Z. Packard, Akira Komoriya, Sarah Palmer, Ann P. Wiegand, Frank Maldarelli, John M. Coffin, John W. Mellors, Claire W. Hallahan, Dean A. Follman, Mark Connors posted by 2 people peterbgilbert atphan
	The failed HIV Merck vaccine study: a step back or a launching point for future vaccine development? [My Copy] J. Exp. Med., Vol. 205, No. 1. (21 January 2008), pp. 7-12. by Rafick-Pierre Sekaly posted by 3 people peterbgilbert cyberwulf alwinpremanand
	Selection on the Human Immunodeficiency Virus Type 1 Proteome following Primary Infection [My Copy] J. Virol., Vol. 80, No. 19. (1 October 2006), pp. 9519-9529. by Yi Liu, John Mcnevin, Jianhong Cao, et al.Hong Zhao, Indira Genowati, Kim Wong, Sherry Mclaughlin, Matthew D. Mcsweyn, Kurt Diem, Claire E. Stevens, Janine Maenza, Hongxia He, David C. Nickle, Daniel Shriner, Sarah E. Holte, Ann C. Collier, Lawrence Corey, M. Juliana Mcelrath, James I. Mullins posted by 3 people peterbgilbert gokhan bmaust
	A consensus epitope prediction approach identifies the breadth of murine TCD8+-cell responses to vaccinia virus [My Copy] Nat Biotech, Vol. 24, No. 7. (11 July 2006), pp. 817-819. by Magdalini Moutaftsi, Bjoern Peters, Valerie Pasquetto, et al.David C. Tscharke, John Sidney, Huynh-Hoa Bui, Howard Grey, Alessandro Sette posted by 1 person peterbgilbert
	Sensitive quantitative predictions of peptide-MHC binding by a 'Query by Committee' artificial neural network approach. [My Copy] Tissue antigens, Vol. 62, No. 5. (November 2003), pp. 378-384. by S. Buus, S. L. Lauemøller, P. Worning, et al.C. Kesmir, T. Frimurer, S. Corbet, A. Fomsgaard, J. Hilden, A. Holm, S. Brunak posted by 1 person peterbgilbert
	The changing face of infective endocarditis [My Copy] Heart, Vol. 92, No. 10. (1 October 2006), pp. 1365-1366. by E. Cecchi, M. Imazio, R. Trinchero posted by 1 person drjohanrizwal
	Echocardiographic risk stratification for early surgery with endocarditis: a cost-effectiveness analysis [My Copy] Heart, Vol. 94, No. 5. (1 May 2008), e18. by L. Liao, D. F. Kong, Z. Samad, et al.P. A. Pappas, J. G. Jollis, S. S. Lin, A. Wang, V. G. Fowler, V. H. Chu, D. J. Sexton, G. R. Corey, C. H. Cabell posted by 1 person drjohanrizwal
	Infective endocarditis: determinants of long term outcome [My Copy] Heart, Vol. 88, No. 1. (1 July 2002), pp. 61-66. by R. O. M. Netzer, S. C. Altwegg, E. Zollinger, M. Tauber, T. Carrel, C. Seiler posted by 1 person drjohanrizwal
	Risk factors and time delay associated with cardiac device infections: Leiden device registry [My Copy] Heart, Vol. 95, No. 9. (1 May 2009), pp. 715-720. by J. C. Lekkerkerker, C. van Nieuwkoop, S. A. Trines, et al.J. G. van der Bom, A. Bernards, E. T. van de Velde, M. Bootsma, K. Zeppenfeld, J. W. Jukema, J. W. Borleffs, M. J. Schalij, L. van Erven posted by 1 person drjohanrizwal
	THE HUMAN PACEMAKER AND ITS PATHOLOGY [My Copy] Br. Heart J., Vol. 22, No. 2. (1 April 1960), pp. 153-167. by Reginald E. B. Hudson posted by 1 person drjohanrizwal
	VALVE DISEASE: Endocarditis: basics [My Copy] Heart, Vol. 86, No. 4. (1 October 2001), pp. 476-480. by S. J. Eykyn posted by 1 person drjohanrizwal
	Clinical and bacteriological characteristics of infective endocarditis in the elderly. [My Copy] Heart, Vol. 77, No. 3. (1 March 1997), pp. 260-263. by C. Selton-Suty, B. Hoen, A. Grentzinger, et al.P. Houplon, M. Maignan, Y. Juilliere, N. Danchin, P. Canton, F. Cherrier posted by 1 person drjohanrizwal
	Late complications following permanent pacemaker implantation or elective unit replacement [My Copy] Heart, Vol. 80, No. 3. (1 September 1998), pp. 240-244. by A. A. Harcombe, S. A. Newell, P. F. Ludman, et al.T. E. Wistow, L. D. Sharples, P. M. Schofield, D. L. Stone, L. M. Shapiro, T. Cole, M. C. Petch posted by 1 person drjohanrizwal
	Long term results of mechanical prostheses for treatment of active infective endocarditis [My Copy] Heart, Vol. 86, No. 1. (1 July 2001), pp. 63-68. by J. M. Guerra, M. P. Tornos, G. Permanyer-Miralda, B. Almirante, M. Murtra, J. Soler-Soler posted by 1 person drjohanrizwal
	The changing face of infective endocarditis [My Copy] Heart, Vol. 92, No. 7. (1 July 2006), pp. 879-885. by B. D. Prendergast posted by 1 person drjohanrizwal
	Pacemaker lead complications: when is extraction appropriate and what can we learn from published data? [My Copy] Heart, Vol. 85, No. 3. (1 March 2001), pp. 254-259. by F. A. Bracke, A. Meijer, L. M. van Gelder posted by 1 person drjohanrizwal
	Mortality from infective endocarditis: clinical predictors of outcome [My Copy] Heart, Vol. 88, No. 1. (1 July 2002), pp. 53-60. by S. M. Wallace, B. I. Walton, R. K. Kharbanda, R. Hardy, A. P. Wilson, R. H. Swanton posted by 1 person drjohanrizwal
	Clinical criteria and the appropriate use of transthoracic echocardiography for the exclusion of infective endocarditis [My Copy] Heart, Vol. 89, No. 3. (1 March 2003), pp. 273-275. by K. Greaves, D. Mou, A. Patel, D. S. Celermajer posted by 1 person drjohanrizwal
	Local symptoms at the site of pacemaker implantation indicate latent systemic infection [My Copy] Heart, Vol. 90, No. 8. (1 August 2004), pp. 882-886. by D. Klug, F. Wallet, D. Lacroix, et al.C. Marquie, C. Kouakam, S. Kacet, R. Courcol posted by 1 person drjohanrizwal
	Pacemaker lead infection: echocardiographic features, management, and outcome [My Copy] Heart, Vol. 81, No. 1. (1 January 1999), pp. 82-87. by F. Victor, C. De Place, C. Camus, et al.H. Le Breton, C. Leclercq, D. Pavin, P. Mabo, C. Daubert posted by 1 person drjohanrizwal
	Pacemaker lead infection: report of three cases and review of the literature [My Copy] Heart, Vol. 81, No. 1. (1 January 1999), pp. 88-91. by J. G. Voet, Y. R. Vandekerckhove, L. L. Muyldermans, L. H. Missault, L. J. Matthys posted by 1 person drjohanrizwal
	Diagnostic criteria and problems in infective endocarditis [My Copy] Heart, Vol. 90, No. 6. (1 June 2004), pp. 611-613. by B. D. Prendergast posted by 2 people drjohanrizwal roboonya
	Dendritic cells in innate immune responses against HIV. [My Copy] Current molecular medicine, Vol. 2, No. 8. (December 2002), pp. 739-756. by C. Servet, L. Zitvogel, A. Hosmalin posted by 1 person arjunrustagi
	IRF3 mediates a TLR3/TLR4-specific antiviral gene program. [My Copy] Immunity, Vol. 17, No. 3. (September 2002), pp. 251-263. by Sean Doyle, Sagar Vaidya, Ryan O'Connell, et al.Hajir Dadgostar, Paul Dempsey, Ting Wu, Govinda Rao, Ren Sun, Margaret Haberland, Robert Modlin, Genhong Cheng posted by 1 person arjunrustagi
	HIV, Restriction Factors, and Interferon [My Copy] Journal of Interferon & Cytokine Research (20 August 2009), 090820125849046. by Stuart Neil, Paul Bieniasz posted by 1 person arjunrustagi
	Polymorphisms in IRF-1 associated with resistance to HIV-1 infection in highly exposed uninfected Kenyan sex workers. [My Copy] AIDS (London, England), Vol. 21, No. 9. (31 May 2007), pp. 1091-1101. by T. B. Ball, H. Ji, J. Kimani, et al.P. McLaren, C. Marlin, A. V. Hill, F. A. Plummer posted by 1 person arjunrustagi
	HIV-1 activates macrophages independent of Toll-like receptors. [My Copy] PloS one, Vol. 3, No. 12. (2008) by J. N. Brown, J. J. Kohler, C. R. Coberley, J. W. Sleasman, M. M. Goodenow posted by 1 person arjunrustagi
	Type I interferons and interferon regulatory factors regulate TNF-related apoptosis-inducing ligand (TRAIL) in HIV-1-infected macrophages. [My Copy] PloS one, Vol. 4, No. 4. (2009) by Y. Huang, A. Walstrom, L. Zhang, et al.Y. Zhao, M. Cui, L. Ye, J. C. Zheng posted by 1 person arjunrustagi
	Development of monoclonal antibodies against human IRF-5 and their use in identifying the binding of IRF-5 to nuclear import proteins karyopherin-alpha1 and -beta1. [My Copy] Yonsei medical journal, Vol. 49, No. 6. (31 December 2008), pp. 1023-1031. by S. I. Yeon, J. H. Youn, M. H. Lim, et al.H. J. Lee, Y. M. Kim, J. E. Choi, J. M. Lee, J. S. Shin posted by 1 person arjunrustagi
	Poly (I:C) induced immune response in lymphoid tissues involves three sequential waves of type I IFN expression. [My Copy] Virology, Vol. 386, No. 2. (10 April 2009), pp. 225-236. by T. Démoulins, M. L. Baron, N. Kettaf, A. Abdallah, E. Sharif-Askari, R. P. Sékaly posted by 1 person arjunrustagi
	Differential regulation of human interferon A gene expression by interferon regulatory factors 3 and 7. [My Copy] Molecular and cellular biology, Vol. 29, No. 12. (June 2009), pp. 3435-3450. by P. Génin, R. Lin, J. Hiscott, A. Civas posted by 1 person arjunrustagi
	Functional characterization of murine interferon regulatory factor 5 (IRF-5) and its role in the innate antiviral response. [My Copy] The Journal of biological chemistry, Vol. 283, No. 21. (23 May 2008), pp. 14295-14308. by A. Paun, J. T. Reinert, Z. Jiang, et al.C. Medin, M. Y. Balkhi, K. A. Fitzgerald, P. M. Pitha posted by 1 person arjunrustagi
	IRF-5 is a mediator of the death receptor-induced apoptotic signaling pathway. [My Copy] The Journal of biological chemistry, Vol. 284, No. 5. (30 January 2009), pp. 2767-2777. by G. Hu, B. J. Barnes posted by 1 person arjunrustagi
	The Kaposi's Sarcoma-associated Herpesvirus-encoded vIRF-3 Inhibits Cellular IRF-5. [My Copy] The Journal of biological chemistry, Vol. 284, No. 13. (27 March 2009), pp. 8525-8538. by E. Wies, A. S. Hahn, K. Schmidt, et al.C. Viebahn, N. Rohland, A. Lux, T. Schellhorn, A. Holzer, J. U. Jung, F. Neipel posted by 1 person arjunrustagi
	Identification of caspase-mediated decay of interferon regulatory factor (IRF)-3, exploited by a Kaposi's sarcoma-associated herpesvirus (KSHV) immunoregulatory protein. [My Copy] The Journal of biological chemistry (24 June 2009) by Cristina Areste, Mohamed Mutocheluh, David J. Blackbourn posted by 1 person arjunrustagi
	Visualizing Antigen-Specific and Infected Cells in Situ Predicts Outcomes in Early Viral Infection [My Copy] Science, Vol. 323, No. 5922. (27 March 2009), pp. 1726-1729. by Qingsheng Li, Pamela J. Skinner, Sang-Jun Ha, et al.Lijie Duan, Teresa L. Mattila, Aaron Hage, Cara White, Daniel L. Barber, Leigh O'Mara, Peter J. Southern, Cavan S. Reilly, John V. Carlis, Christopher J. Miller, Rafi Ahmed, Ashley T. Haase posted by 2 people arjunrustagi jbhiatt
	Vaginal microbicides and the prevention of HIV transmission [My Copy] The Lancet Infectious Diseases, Vol. 8, No. 11. (November 2008), pp. 685-697. by B. Cutler, J. Justman posted by 2 people cwhitaker arjunrustagi
	Broad diversity of neutralizing antibodies isolated from memory B cells in HIV-infected individuals [My Copy] Nature (15 March 2009) by Johannes F. Scheid, Hugo Mouquet, Niklas Feldhahn, et al.Michael S. Seaman, Klara Velinzon, John Pietzsch, Rene G. Ott, Robert M. Anthony, Henry Zebroski, Arlene Hurley, Adhuna Phogat, Bimal Chakrabarti, Yuxing Li, Mark Connors, Florencia Pereyra, Bruce D. Walker, Hedda Wardemann, David Ho, Richard T. Wyatt, John R. Mascola, Jeffrey V. Ravetch, Michel C. Nussenzweig posted by 5 people pineapple arjunrustagi SFUHIVResearch kahenry jbhiatt
	Hypoxia-induced lysyl oxidase is a critical mediator of bone marrow cell recruitment to form the premetastatic niche. [My Copy] Cancer cell, Vol. 15, No. 1. (6 January 2009), pp. 35-44. by J. T. Erler, K. L. Bennewith, T. R. Cox, et al.G. Lang, D. Bird, A. Koong, Q. T. Le, A. J. Giaccia posted by 1 person arjunrustagi
	Glycerol monolaurate prevents mucosal SIV transmission [My Copy] Nature (04 March 2009) by Qingsheng Li, Jacob D. Estes, Patrick M. Schlievert, et al.Lijie Duan, Amanda J. Brosnahan, Peter J. Southern, Cavan S. Reilly, Marnie L. Peterson, Nancy Schultz-Darken, Kevin G. Brunner, Karla R. Nephew, Stefan Pambuccian, Jeffrey D. Lifson, John V. Carlis, Ashley T. Haase posted by 5 people nparrish jenm09 absterga UW MSTP arjunrustagi
	Recognition of cytosolic DNA activates an IRF3-dependent innate immune response. [My Copy] Immunity, Vol. 24, No. 1. (January 2006), pp. 93-103. by Daniel B. Stetson, Ruslan Medzhitov posted by 2 people arjunrustagi Pezda
	HIV-1 accessory proteins VPR and Vif modulate antiviral response by targeting IRF-3 for degradation. [My Copy] Virology, Vol. 373, No. 1. (30 March 2008), pp. 85-97. by A. Okumura, T. Alce, B. Lubyova, H. Ezelle, K. Strebel, P. M. Pitha posted by 4 people arjunrustagi wsjames Oxford Virology kieran101
	Gammadelta T cell immune manipulation during chronic phase of simian HIV infection confers immunological benefits. [My Copy] Journal of immunology (Baltimore, Md. : 1950), Vol. 183, No. 8. (15 October 2009), pp. 5407-5417. by Zahida Ali, Lin Yan, Nicholas Plagman, et al.Armin Reichenberg, Martin Hintz, Hassan Jomaa, Francois Villinger, Zheng W. Chen posted by 1 person arjunrustagi
	HIV CTL escape: at what cost? [My Copy] Retrovirology, Vol. 1 (2004) by S. M. Smith posted by 1 person Natasha
	A simple relationship between viral load and survival time in HIV-1 infection [My Copy] PNAS, Vol. 96, No. 20. (28 September 1999), pp. 11549-11553. by Ramy A. Arnaout, Alun L. Lloyd, Thomas R. O'Brien, James J. Goedert, John M. Leonard, Martin A. Nowak posted by 1 person Natasha
	Mapping Sites of Positive Selection and Amino Acid Diversification in the HIV Genome: An Alternative Approach to Vaccine Design? [My Copy] Genetics, Vol. 167, No. 3. (1 July 2004), pp. 1047-1058. by Tulio de Oliveira, Marco Salemi, Michelle Gordon, et al.Anne-Mieke Vandamme, Estrelita J. van Rensburg, Susan Engelbrecht, Hoosen M. Coovadia, Sharon Cassol posted by 3 people MRCBIRD BioNica Natasha
	Variability at human immunodeficiency virus type 1 subtype C protease cleavage sites: an indication of viral fitness? [My Copy] J Virol, Vol. 77, No. 17. (September 2003), pp. 9422-9430. by T. de Oliveira, S. Engelbrecht, E. Janse van Rensburg, et al.M. Gordon, K. Bishop, J. zur Megede, S. W. Barnett, S. Cassol posted by 1 person Natasha
	Conservation of functional domains and limited heterogeneity of HIV-1 reverse transcriptase gene following vertical transmission. [My Copy] Retrovirology, Vol. 2 (2005) by V. Sundaravaradan, T. Hahn, N. Ahmad posted by 1 person Natasha
	Genetic evolution of human immunodeficiency virus type 1 in two spouses responding successfully to highly active antiretroviral therapy. [My Copy] AIDS Res Hum Retroviruses, Vol. 19, No. 1. (1 January 2003), pp. 65-71. by C. G. Anastassopoulou, D. Paraskevis, V. A. Sypsa, et al.S. E. Chryssou, A. Antoniadou, H. Giamarelou, A. Hatzakis posted by 1 person Natasha
	Predicting adaptive evolution. [My Copy] Nat Rev Genet, Vol. 2, No. 5. (May 2001), pp. 387-392. by R. M. Bush posted by 1 person Natasha
	Adaptation and immunity. [My Copy] PLoS Biol, Vol. 2, No. 9. (September 2004) by E. C. Holmes posted by 2 people tomhebbron Natasha
	Evolutionary dynamics of human retroviruses investigated through full-genome scanning. [My Copy] Mol Biol Evol, Vol. 22, No. 4. (April 2005), pp. 942-951. by P. Lemey, S. Van Dooren, A. M. Vandamme posted by 1 person Natasha
	Distinct patterns of natural selection in the reverse transcriptase gene of HIV-1 in the presence and absence of antiretroviral therapy. [My Copy] Virology, Vol. 325, No. 2. (1 August 2004), pp. 181-191. by E. de S Leal, E. C. Holmes, P. M. Zanotto posted by 1 person Natasha
	Evidence for positive selection driving the evolution of HIV-1 env under potent antiviral therapy. [My Copy] Virology, Vol. 284, No. 2. (5 June 2001), pp. 250-258. by S. D. Frost, H. F. Günthard, J. K. Wong, D. Havlir, D. D. Richman, A. J. Leigh Brown posted by 1 person Natasha
	Comparative study of adaptive molecular evolution in different human immunodeficiency virus groups and subtypes. [My Copy] J Virol, Vol. 78, No. 4. (February 2004), pp. 1962-1970. by M. Choisy, C. H. Woelk, J. F. Guégan, D. L. Robertson posted by 2 people mishar Natasha
	Widespread adaptive evolution in the human immunodeficiency virus type 1 genome. [My Copy] J Mol Evol, Vol. 57, No. 2. (August 2003), pp. 212-221. by W. Yang, J. P. Bielawski, Z. Yang posted by 1 person Natasha
	Stochastic or deterministic: what is the effective population size of HIV-1? [My Copy] Trends Microbiol (13 October 2006) by Roger D D. Kouyos, Christian L L. Althaus, Sebastian Bonhoeffer posted by 3 people alexeid Natasha rogerdimitri
	Effect of recombination on the accuracy of the likelihood method for detecting positive selection at amino acid sites. [My Copy] Genetics, Vol. 164, No. 3. (July 2003), pp. 1229-1236. by M. Anisimova, R. Nielsen, Z. Yang posted by 1 person Natasha
	Potential impact of recombination on sitewise approaches for detecting positive natural selection. [My Copy] Genet Res, Vol. 81, No. 2. (April 2003), pp. 115-121. by D. Shriner, D. C. Nickle, M. A. Jensen, J. I. Mullins posted by 2 people gjuggler Natasha
	A novel exploratory method for visual recombination detection. [My Copy] Genome Biol, Vol. 4, No. 5. (2003) by K. Strimmer, K. Forslund, B. Holland, V. Moulton posted by 2 people operon Natasha
	Robust inference of positive selection from recombining coding sequences [My Copy] Bioinformatics, Vol. 22, No. 20. (15 October 2006), pp. 2493-2499. by Konrad Scheffler, Darren P. Martin, Cathal Seoighe posted by 4 people MRCBIRD operon Natasha Garamonfok
	Accuracy and power of statistical methods for detecting adaptive evolution in protein coding sequences and for identifying positively selected sites. [My Copy] Genetics, Vol. 168, No. 2. (1 October 2004), pp. 1041-1051. by W. S. Wong, Z. Yang, N. Goldman, R. Nielsen posted by 7 people katholt renewang BioNica Natasha timflutre gjuggler CharlesM
	Codon-Substitution Models for Heterogeneous Selection Pressure at Amino Acid Sites [My Copy] Genetics, Vol. 155, No. 1. (1 May 2000), pp. 431-449. by Ziheng Yang, Rasmus Nielsen, Nick Goldman, Anne-Mette K. Pedersen posted by 9 people druvus fernan BioNica Natasha dylan77 Garamonfok tale gjuggler emptyhb
	Automated Phylogenetic Detection of Recombination Using a Genetic Algorithm [My Copy] Mol Biol Evol, Vol. 23, No. 10. (1 October 2006), pp. 1891-1901. by Sergei L. Kosakovsky Pond, David Posada, Michael B. Gravenor, Christopher H. Woelk, Simon D. W. Frost posted by 6 people calderonv druvus operon Natasha Garamonfok larbiza
	Robust inference of positive selection from recombining coding sequences. [My Copy] Bioinformatics (7 August 2006) by Konrad Scheffler, Darren P P. Martin, Cathal Seoighe posted by 5 people ilyashl hdopazo shehroz Natasha BioinfoCIPF
	Dating of the human-ape splitting by a molecular clock of mitochondrial DNA. [My Copy] J Mol Evol, Vol. 22, No. 2. (1985), pp. 160-174. by M. Hasegawa, H. Kishino, T. Yano posted by 5 people aprasad alexeid AaronDarling Natasha lusk
	Molecular characterization of the HIV-1 gag nucleocapsid gene associated with vertical transmission [My Copy] Retrovirology, Vol. 3 (06 April 2006), 21. by Brian P. Wellensiek, Vasudha Sundaravaradan, Rajesh Ramakrishnan, Nafees Ahmad posted by 1 person Natasha
	Estimating diversifying selection and functional constraint in the presence of recombination [My Copy] Genetics, Vol. 172, No. 3. (30 December 2005), pp. genetics.105.044917-1425. by Daniel J. Wilson, Gilean McVean posted by 3 people operon AaronDarling Natasha
	Immune responses and HIV: a little order from the chaos. [My Copy] J Exp Med (13 March 2006) by David H H. O'connor, Dennis R R. Burton posted by 2 people Vaccine Natasha
	Bayes Empirical Bayes Inference of Amino Acid Sites Under Positive Selection [My Copy] Molecular Biology and Evolution, Vol. 22, No. 4. (April 2005), pp. 1107-1118. by Ziheng Yang, Wendy S. Wong, Rasmus Nielsen posted by 8 people rabu BioNica Natasha stajich Garamonfok Mycology skumagai CharlesM
	Detecting amino acid sites under positive selection and purifying selection. [My Copy] Genetics (16 January 2005) by Tim Massingham, Nick Goldman posted by 8 people MRCBIRD gjuggler gwallau stevanspringer operon BioNica Natasha FAB-lab
	HyPhy: hypothesis testing using phylogenies [My Copy] Bioinformatics, Vol. 21, No. 5. (1 March 2005), pp. 676-679. by Sergei L. Pond, Simon D. W. Frost, Spencer V. Muse posted by 8 people FAB-lab rvosa BioNica druvus operon radek Natasha Garamonfok
	Regulation of the Cellular Heat Shock Response in Caenorhabditis elegans by Thermosensory Neurons [My Copy] Science, Vol. 320, No. 5877. (9 May 2008), pp. 811-814. by Veena Prahlad, Tyler Cornelius, Richard I. Morimoto posted by 5 people thegoose2 C. elegans / WormBase tharris GX biomcgary
	Cutting Edge: NKT Cells Constitutively Express IL-23 Receptor and RORgammat and Rapidly Produce IL-17 upon Receptor Ligation in an IL-6-Independent Fashion [My Copy] J Immunol, Vol. 180, No. 8. (15 April 2008), pp. 5167-5171. by Aleksandra V. Rachitskaya, Anna M. Hansen, Reiko Horai, et al.Zhuqing Li, Rafael Villasmil, Dror Luger, Robert B. Nussenblatt, Rachel R. Caspi posted by 1 person GX
	Discovery of a Novel and Potent Class of FabI-Directed Antibacterial Agents [My Copy] Antimicrob. Agents Chemother., Vol. 46, No. 10. (1 October 2002), pp. 3118-3124. by David J. Payne, William H. Miller, Valerie Berry, et al.John Brosky, Walter J. Burgess, Emile Chen, Walter E. Dewolf, Andrew P. Fosberry, Rebecca Greenwood, Martha S. Head, Dirk A. Heerding, Cheryl A. Janson, Deborah D. Jaworski, Paul M. Keller, Peter J. Manley, Terrance D. Moore, Kenneth A. Newlander, Stewart Pearson, Brian J. Polizzi, Xiayang Qiu, Stephen F. Rittenhouse, Courtney Slater-Radosti, Kevin L. Salyers, Mark A. Seefeld, Martin G. Smyth, Dennis T. Takata, Irene N. Uzinskas, Kalindi Vaidya, Nicola G. Wallis, Scott B. Winram, Catherine C. Yuan, William F. Huffman posted by 1 person GX
	An Anti-Idiotype Vaccine Elicits a Specific Response to N-Glycolyl Sialic Acid Residues of Glycoconjugates in Melanoma Patients [My Copy] J Immunol, Vol. 168, No. 5. (1 March 2002), pp. 2523-2529. by Mauro Alfonso, Alain Diaz, Ana M. Hernandez, et al.Alexis Perez, Edmundo Rodriguez, Roberto Bitton, Rolando Perez, Ana M. Vazquez posted by 1 person GX
	Monoclonal antibody-mediated enhancement of dengue virus infection in vitro and in vivo and strategies for prevention [My Copy] Proceedings of the National Academy of Sciences, Vol. 104, No. 22. (29 May 2007), pp. 9422-9427. by Ana P. Goncalvez, Ronald E. Engle, Marisa St. Claire, Robert H. Purcell, Ching-Juh Lai posted by 2 people feltesm GX
	Complement protein C1q inhibits antibody-dependent enhancement of flavivirus infection in an IgG subclass-specific manner. [My Copy] Cell host & microbe, Vol. 2, No. 6. (13 December 2007), pp. 417-426. by E. Mehlhop, C. Ansarah-Sobrinho, S. Johnson, et al.M. Engle, D. H. Fremont, T. C. Pierson, M. S. Diamond posted by 2 people feltesm GX
	Adenylate Cyclase Toxin from Bordetella pertussis Synergizes with Lipopolysaccharide To Promote Innate Interleukin-10 Production and Enhances the Induction of Th2 and Regulatory T Cells [My Copy] Infect. Immun., Vol. 72, No. 3. (1 March 2004), pp. 1568-1579. by Padraig J. Ross, Ed C. Lavelle, Kingston H. Mills, Aoife P. Boyd posted by 1 person GX
	T cell immunity evasion by virulent Salmonella enterica [My Copy] Immunology Letters, Vol. 111, No. 1. (31 July 2007), pp. 14-20. by Susan M. Bueno, Pablo A. González, Reid J. Schwebach, Alexis M. Kalergis posted by 1 person GX
	A CD8+ T cell immune evasion protein specific to Epstein-Barr virus and its close relatives in Old World primates [My Copy] J. Exp. Med., Vol. 204, No. 8. (6 August 2007), pp. 1863-1873. by Andrew D. Hislop, Maaike E. Ressing, Daphne van Leeuwen, et al.Victoria A. Pudney, Danielle Horst, Danijela Koppers-Lalic, Nathan P. Croft, Jacques J. Neefjes, Alan B. Rickinson, Emmanuel J. Wiertz posted by 1 person GX
	Cowpox Virus Exploits the Endoplasmic Reticulum Retention Pathway to Inhibit MHC Class I Transport to the Cell Surface [My Copy] Cell Host & Microbe, Vol. 2, No. 5. (15 November 2007), pp. 306-315. by Minji Byun, Xiaoli Wang, Melissa Pak, Ted H. Hansen, Wayne M. Yokoyama posted by 1 person GX
	Role of Macrophage Apoptosis in the Pathogenesis of Yersinia [My Copy] Role of Apoptosis in Infection (2005), pp. 151-173. by Y. Zhang, J. Bliska posted by 1 person GX