Todd J Treangen's Top Recommendations

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	Velvet: algorithms for de novo short read assembly using de Bruijn graphs. [My Copy] Genome research, Vol. 18, No. 5. (18 May 2008), pp. 821-829. by Daniel R. Zerbino, Ewan Birney posted by 45 people vplagnol bedo jwhitney cthachuk hzoltan azazello ajbattle jmanning2k n00c carlk pachorip APRegier jbhiatt jonilaserson operon jahwa jsatkosk sandfire thegoose2 katholt robsyme djkt hpaces AaronDarling mhz idoerg jmcq Bioinformatics dswan dakelley jasontsai DeNovoAssembly-SIMR acn druvus natstreet nmohelli stajich Mycology farhat iris42 tharris Neeperando sharpton GustavoLacerda gdb
	Evolution of genes and genomes on the Drosophila phylogeny [My Copy] Nature, Vol. 450, No. 7167. (08 November 2007), pp. 203-218. posted by 42 people biomcgary nuttpo daveGerrard Anachff GustavoLacerda mqbphcw3 rpetrenko gwallau chica jlncdr aprasad gjuggler lizbiogen jbsaltz druvus pradiptaray pengchy operon tmmurali indigoviolet djkt timflutre stajich zwang Garamonfok lp2 Bioinformatics EisenLab CharlesM hpaces caseybrown emptyhb urgi Mycology noor PetrovLab isimpson balicea cisevol BergmanLab Drosophila-Genetics-Genomics-2008 hdopazo
	ALLPATHS: De novo assembly of whole-genome shotgun microreads [My Copy] Genome Research, Vol. 18, No. 5. (13 May 2008), pp. 810-820. by Jonathan Butler, Iain MacCallum, Michael Kleber, et al.Ilya A. Shlyakhter, Matthew K. Belmonte, Eric S. Lander, Chad Nusbaum, David B. Jaffe posted by 24 people n00c carlk jmanning2k APRegier pachorip jonilaserson operon thegoose2 natstreet AaronDarling mhz dakelley druvus stajich azazello hpaces Mycology tharris jwhitney iris42 Neeperando sharpton GustavoLacerda GeeSharpMinor
	Discovering and detecting transposable elements in genome sequences [My Copy] Brief Bioinform, Vol. 8, No. 6. (10 October 2007), pp. bbm048-392. by Casey M. Bergman, Hadi Quesneville posted by 17 people operon orzenil gwallau natstreet druvus gpappas dpollard timflutre GustavoLacerda cabbagezs EisenLab maximilianh cisevol BergmanLab urgi yoanjacquemin pradiptaray
	CloudBurst: highly sensitive read mapping with MapReduce [My Copy] Bioinformatics, Vol. 25, No. 11. (1 June 2009), pp. 1363-1369. by Michael C. Schatz posted by 36 people joshdsullivan cthachuk hzoltan jfr walshtp idonaldson orzenil heliopais dakelley bozdagd agbiotec jandot guhjy n00c cymacs semrich nuin operon AlexBateman fgibson KCL & UCL Bioinformatics rschulz Bioinformatics dswan mitko djkt humburg jmeppley coela vagoskar svenrahmann natstreet brianb Neeperando druvus neils
	SHARCGS, a fast and highly accurate short-read assembly algorithm for de novo genomic sequencing. [My Copy] Genome research, Vol. 17, No. 11. (November 2007), pp. 1697-1706. by J. C. Dohm, C. Lottaz, T. Borodina, H. Himmelbauer posted by 19 people operon n00c robsyme dakelley DeNovoAssembly-SIMR acn druvus nmohelli natstreet timflutre stajich ghattem azazello GustavoLacerda niallhaslam Mycology flexer jwhitney iris42
	OrthoMCL: identification of ortholog groups for eukaryotic genomes. [My Copy] Genome research, Vol. 13, No. 9. (September 2003), pp. 2178-2189. by Li Li, Christian J. Stoeckert, David S. Roos posted by 18 people GustavoLacerda biomcgary sjcockell thegoose2 nlapalu dullhunk natstreet druvus C. elegans / WormBase tharris mdimmic operon indigoviolet AaronDarling bluto EisenLab maximilianh ninch
	Discovery of functional elements in 12 Drosophila genomes using evolutionary signatures. [My Copy] Nature, Vol. 450, No. 7167. (8 November 2007), pp. 219-232. by A. Stark, M. F. Lin, P. Kheradpour, et al.J. S. Pedersen, L. Parts, J. W. Carlson, M. A. Crosby, M. D. Rasmussen, S. Roy, A. N. Deoras, J. G. Ruby, J. Brennecke, , , E. Hodges, A. S. Hinrichs, A. Caspi, B. Paten, S. W. Park, M. V. Han, M. L. Maeder, B. J. Polansky, B. E. Robson, S. Aerts, J. van Helden, B. Hassan, D. G. Gilbert, D. A. Eastman, M. Rice, M. Weir, M. W. Hahn, Y. Park, C. N. Dewey, L. Pachter, W. J. Kent, D. Haussler, E. C. Lai, D. P. Bartel, G. J. Hannon, T. C. Kaufman, M. B. Eisen, A. G. Clark, D. Smith, S. E. Celniker, W. M. Gelbart, M. Kellis posted by 25 people microRNA heliopais anphony kieran101 Neeperando pradiptaray rouault druvus operon tmmurali djkt timflutre stajich lp2 cabbagezs nklee hpaces roys caseybrown gjuggler Mycology shuzhens PetrovLab cisevol Drosophila-Genetics-Genomics-2008
	Phylogeny-Aware Gap Placement Prevents Errors in Sequence Alignment and Evolutionary Analysis [My Copy] Science, Vol. 320, No. 5883. (20 June 2008), pp. 1632-1635. by Ari Loytynoja, Nick Goldman posted by 33 people memerman operon TRHvidsten BioNica cmzmasek timflutre pradiptaray alexeid marti bpcusack hpaces dinnes gjuggler djkt ArtemPankin Khavkin's lab phoenixzxl jago marck imtechnology aprasad zwang bmaust bpb michaelbarton Schmidtc AbnerCYH gulsacan emptyhb iSEEM jlgreen Green Lab nuin
	ABySS: a parallel assembler for short read sequence data. [My Copy] Genome research, Vol. 19, No. 6. (1 June 2009), pp. 1117-1123. by Jared T. Simpson, Kim Wong, Shaun D. Jackman, Jacqueline E. Schein, Steven J. Jones, Inanç Birol posted by 29 people jfr cthachuk hzoltan ramonvidal orzenil pachorip GustavoLacerda jonilaserson operon BergmanLab polivares reyez jasontsai n00c humburg dakelley jessopher idonaldson robsyme neils natstreet AaronDarling druvus rpatward dswan Mycology stajich jbhiatt erikarner
	Ultrafast and memory-efficient alignment of short DNA sequences to the human genome [My Copy] Genome Biology, Vol. 10, No. 3. (2009), R25. by Ben Langmead, Cole Trapnell, Mihai Pop, Steven Salzberg posted by 41 people jfr hzoltan cthachuk darshan fstrozzi adijr debasis bozdagd BergmanLab polivares torfinnnome n00c talponer jmcq rschulz SIMR bioinformatics ghattem operon humburg idonaldson mmartin iSEEM skembel dquest heliopais djkt GeeSharpMinor bertelsen darian Notre Dame Bioinformatics semrich dakelley idoerg vmsr hpaces admash pdexheimer mhamada fpattyn natstreet druvus
	De Novo Repeat Classification and Fragment Assembly [My Copy] Genome Research, Vol. 14, No. 9. (September 2004), pp. 1786-1796. by Paul A. Pevzner, Haixu Tang, Glenn Tesler posted by 16 people pachorip natstreet dakelley druvus brl briann operon timflutre azazello prajlondhe nedwards urgi yoanjacquemin dmc Ema Neeperando
	How to write consistently boring scientific literature [My Copy] Oikos, Vol. 116, No. 5. (May 2007), pp. 723-727. by Kaj Sand-Jensen posted by 212 people gvdh kimbatchelor welliegirl DavidG67 nellapower jimo75 sachingarg claudiushauptmann jmzhuo Horduna toszko chriswillmott mthomure Thaverkamp ibre sfalsharif lafuente Sergey_gerbek Torsten_Holmer aaltenburger tminze mmborges Dannycoutinho soniapereira Anita13 simonhearne rudalert ulrichs UWA Science Communication duel_jetty nmsx TVB timsenior livingthingdan alhoori poojamaj letillett christianholz amynmoore pvdg leonardo Med Anthro @ UF cgravlee bhengeveld ansobol jrw proportional wendygarnica jsatkosk eumelus pdpcosta AnthonySoprano wasteland93 buchgeher lmichan NIlz sxs732 artaban421 kieranhood rabit pauljhurtado SantoshKalwar aldra zchen75 nbawia Zephyrus jgebbie lanmuzi amadeusstevenson akuhn metatheory Fneesen hkimura beete CamilleH luciensamary jcreed R_C_Cordeiro thenose cyounkin robertlischke bspackman lyss Scholarly Communication sebpaquet c_hughes klauso kaiserm tomhebbron tarokiritani nGrenier girabbit jaia CulCog alexander_bauer Gaetan cjhall mdwelsh231 sniklas polivares MurphysLab ckai1 tux2000 petko_bogdanov carelcad Tomste yangjustinc thegoose michaelbanks mrt2k9 marekrud ibuch pawelsobko klexa tunheim Elley AJCann amoreno operon McCammon barry jod999 guhjy pick600 leliavski ombamawu mjoach Publicase Thermaneutist gwallau tnhh signori birte bertelsen mmuecke Mohan-S Dori2008 konstantinos charoy flips arsyed sjefarrar rohanlowe syah jjray zzh1986 brownstudy abellogin fungal sgeuter jkglenn psique anphony ajaymalik jjrohal markusd conradlee mschmer gkoenig natstreet BergmanLab cisevol silberbauer Khavkin's lab ArtemPankin druvus allysonlister dullhunk VGreiff dbk ultrascichick ahaeusler rickl brian toomash orca Borelli cmunson lfriedl sterovetta maike echinotrix awooga yEvb0 scpeters jford pratap williamdwalker sjones pseudopharm cjeans sensesublime TaqSys soumitri GeeSharpMinor tumo rebeccamancy ascharle suizan kaniko erklaerbaer boosda kdl Neuroscience STS ColDyn feminist_technoscience OrganizationResearch Enactment Academic Writing, Literacies and Discourse hejibo randomname
	De novo bacterial genome sequencing: Millions of very short reads assembled on a desktop computer [My Copy] Genome Research, Vol. 18, No. 5. (10 May 2008), pp. 802-809. by David Hernandez, Patrice FranÃ§ois, Laurent Farinelli, Magne Ãsterã¥s, Jacques Schrenzel posted by 20 people n00c GeeSharpMinor pachorip operon druvus dakelley DeNovoAssembly-SIMR acn nmohelli GustavoLacerda jmeppley stajich azazello microbiology_nijmegen Katje Mycology gatech-compgenomics iris42 balicea Neeperando
	Automated De Novo Identification of Repeat Sequence Families in Sequenced Genomes [My Copy] Genome Research, Vol. 12, No. 8. (1 August 2002), pp. 1269-1276. by Zhirong Bao, Sean R. Eddy posted by 10 people operon orzenil natstreet druvus aprasad timflutre Jporci urgi yoanjacquemin Neeperando
	Real-Time DNA Sequencing from Single Polymerase Molecules [My Copy] Science, Vol. 323, No. 5910. (2 January 2009), pp. 133-138. by John Eid, Adrian Fehr, Jeremy Gray, et al.Khai Luong, John Lyle, Geoff Otto, Paul Peluso, David Rank, Primo Baybayan, Brad Bettman, Arkadiusz Bibillo, Keith Bjornson, Bidhan Chaudhuri, Frederick Christians, Ronald Cicero, Sonya Clark, Ravindra Dalal, Alex deWinter, John Dixon, Mathieu Foquet, Alfred Gaertner, Paul Hardenbol, Cheryl Heiner, Kevin Hester, David Holden, Gregory Kearns, Xiangxu Kong, Ronald Kuse, Yves Lacroix, Steven Lin, Paul Lundquist, Congcong Ma, Patrick Marks, Mark Maxham, Devon Murphy, Insil Park, Thang Pham, Michael Phillips, Joy Roy, Robert Sebra, Gene Shen, Jon Sorenson, Austin Tomaney, Kevin Travers, Mark Trulson, John Vieceli, Jeffrey Wegener, Dawn Wu, Alicia Yang, Denis Zaccarin, Peter Zhao, Frank Zhong, Jonas Korlach, Stephen Turner posted by 42 people hzoltan operon n00c kinestetika mtagaya iSEEM jlgreen dna idoerg absterga lukzky ImranRaoufMalik Archaeogenetics inesdesantiago 7ac5 wimufi cactus jasontsai mlangill melting polivares pkonings natstreet fhalbrit druvus felsani moernerlab samjlord Bioinformatics - CRUK Stew ghattem nedwards myzhang pengchy jbhiatt GeeSharpMinor GustavoLacerda azazello sconlan alexknight emptyhb caseybrown
	Local DNA topography correlates with functional noncoding regions of the human genome. [My Copy] Science (New York, N.Y.), Vol. 324, No. 5925. (17 April 2009), pp. 389-392. by Stephen C. Parker, Loren Hansen, Hatice Ozel O. Abaan, Thomas D. Tullius, Elliott H. Margulies posted by 45 people BergmanLab daveGerrard operon sujaikumar antonkratz pradiptaray roys gjuggler benjaminsb gdb hagechouchin443 tomtullius scjparker psique orzenil emptyhb ilyashl coela VGreiff APRegier myzhang pkonings akundaje athma absterga rpatward timflutre Mycology stajich bpcusack jbhiatt djkt structural_bioinformatics dhlbh friendpine RockmanLab EisenLab cis-regulatory-evolution dpollard inesdesantiago JustinCrocker aprasad maximilianh idonaldson kshundyak
	Mauve: Multiple Alignment of Conserved Genomic Sequence With Rearrangements [My Copy] Genome Research, Vol. 14, No. 7. (July 2004), pp. 1394-1403. by Aaron C. E. Darling, Bob Mau, Frederick R. Blattner, Nicole T. Perna posted by 16 people rneches foxpowa APRegier Khavkin's lab ArtemPankin hpaces Neeperando bcondon semrich operon catmat AaronDarling azazello gatech-compgenomics mariakmejia druvus
	The Population Genetics of dN/dS [My Copy] PLoS Genet, Vol. 4, No. 12. (12 December 2008), e1000304. by Sergey Kryazhimskiy, Joshua B. Plotkin posted by 20 people operon gjuggler seb1 dposada gwallau ilyashl skembel proulx zwang nuin bpcusack R.E.A.D Zephyrus balicea renewang Mycology stajich michaelbarton druvus djkt
	Selectionism and Neutralism in Molecular Evolution [My Copy] Mol Biol Evol, Vol. 22, No. 12. (1 December 2005), pp. 2318-2342. by Masatoshi Nei posted by 14 people codonusage aprasad gjuggler stevanspringer operon akifumi penka BioNica timflutre ankur_iitg Nie FAB-lab ArtemPankin druvus
	Environmental Shotgun Sequencing: Its Potential and Challenges for Studying the Hidden World of Microbes [My Copy] PLoS Biol, Vol. 5, No. 3. (13 March 2007), e82. by Jonathan A. Eisen posted by 20 people druvus skembel hwright Thaverkamp AaronDarling anphony precale adgrativol silberbauer jmeppley jdelcampo azazello beatrizfernandez xingxu Microbial-Ecology jlgreen Green Lab olympos djkt iSEEM
	Next-generation DNA sequencing. [My Copy] Nature biotechnology, Vol. 26, No. 10. (09 October 2008), pp. 1135-1145. by Jay Shendure, Hanlee Ji posted by 50 people Jporci daforerog dchughes hzoltan cthachuk giovenko heliopais seb1 installe niallhaslam Vincent_Rouilly rschulz fishtank bluto Annab katholt jmcq michaelbarton n00c jfr dna nzm farhat idoerg mhz mmartin antonkratz jbhiatt yupu Bioinformatics behindtherabbit guhjy Pascalichouchou frohike dakelley ptrobajo zwang Roswell Cancer Crosstalk Zephyrus psique natstreet druvus nuin alexknight reyez dbk Oxford Virology wsjames pengchy GeeSharpMinor
	RGG: a general GUI Framework for R scripts. [My Copy] BMC bioinformatics, Vol. 10, No. 1. (2009), 74. by Ilhami Visne, Erkan Dilaveroglu, Klemens Vierlinger, et al.Martin Lauss, Ahmet Yildiz, Andreas Weinhaeusel, Christa Noehammer, Friedrich Leisch, Albert Kriegner posted by 26 people operon jfr daforerog natstreet guhjy lwaldron Yanno rdiaz siebert nuin trfield pengchy acj2109 Mycology stajich jmeppley fpattyn VGreiff renatomilani BergmanLab cisevol erexhepa Bioinformatics dswan jandot druvus
	PAML 4: phylogenetic analysis by maximum likelihood. [My Copy] Molecular biology and evolution, Vol. 24, No. 8. (1 August 2007), pp. 1586-1591. by Ziheng Yang posted by 15 people ckenaley biomcgary michaelbarton dquest druvus operon akifumi hdopazo BioNica stajich ryanraaum Mycology RamuAnandakrishnan CharlesM Ema
	A consistency-based consensus algorithm for de novo and reference-guided sequence assembly of short reads [My Copy] Bioinformatics, Vol. 25, No. 9. (1 May 2009), pp. 1118-1124. by Tobias Rausch, Sergey Koren, Gennady Denisov, et al.David Weese, Anne-Katrin Emde, Andreas Doring, Knut Reinert posted by 21 people azazello hzoltan cthachuk GustavoLacerda jasontsai n00c nuin dakelley skembel Thaverkamp reyez TRHvidsten iSEEM djkt Bioinformatics hpaces APRegier pengchy natstreet druvus darian
	Incorporating indel information into phylogeny estimation for rapidly emerging pathogens [My Copy] BMC Evolutionary Biology, Vol. 7, No. 1. (14 March 2007), 40. by Benjamin Redelings, Marc Suchard posted by 7 people timflutre druvus operon aprasad dpollard stajich EisenLab
	Use of simulated data sets to evaluate the fidelity of metagenomic processing methods. [My Copy] Nature methods, Vol. 4, No. 6. (29 June 2007), pp. 495-500. by Konstantinos Mavromatis, Natalia Ivanova, Kerrie Barry, et al.Harris Shapiro, Eugene Goltsman, Alice C. McHardy, Isidore Rigoutsos, Asaf Salamov, Frank Korzeniewski, Miriam Land, Alla Lapidus, Igor Grigoriev, Paul Richardson, Philip Hugenholtz, Nikos C. Kyrpides posted by 22 people dakelley taylor73 sriesenfeld Thaverkamp skembel druvus Yanno oamg jmeppley bluto azazello GustavoLacerda Glimcher_Lab Bioinformatics carlk alexl mjetten microbiology_nijmegen jlgreen Green Lab iSEEM djkt
	GenomeGraphs: integrated genomic data visualization with R. [My Copy] BMC bioinformatics, Vol. 10, No. 1. (2009) by Steffen Durinck, James Bullard, Paul T. Spellman, Sandrine Dudoit posted by 20 people operon daforerog jmeppley klo psique rdiaz guhjy nuin lptolik thomaskelder pkonings natstreet polivares Zephyrus druvus barriot BergmanLab cisevol neils GeeSharpMinor
	High-throughput sequence alignment using Graphics Processing Units [My Copy] BMC Bioinformatics, Vol. 8, No. 1. (2007), 474. by Michael Schatz, Cole Trapnell, Arthur Delcher, Amitabh Varshney posted by 24 people cthachuk aheilbut druvus BergmanLab polivares naoya n00c natstreet KCL & UCL Bioinformatics rschulz operon orzenil Yanno guhjy sephy lusk laughcry nedwards mdimon cndewey heliopais urgi gatech-compgenomics tpreeprem
	Assembling millions of short DNA sequences using SSAKE [My Copy] Bioinformatics, Vol. 23, No. 4. (15 February 2007), pp. 500-501. by Rene L. Warren, Granger G. Sutton, Steven J. M. Jones, Robert A. Holt posted by 14 people katholt jbhiatt jsatkosk AaronDarling floatingpoint idoerg caseybrown druvus natstreet azazello iris42 nmohelli Neeperando yoonk
	Managing and analyzing next-generation sequence data. [My Copy] PLoS computational biology, Vol. 5, No. 6. (26 June 2009), e1000369. by Brent G. Richter, David P. Sexton posted by 45 people Geknitics cthachuk hzoltan chvlyl sameersoi hpaces gdv GeeSharpMinor idonaldson darian daveGerrard tharris Yanno inesdesantiago jcaddy agbiotec humburg Zephyrus daforerog stubrown GustavoLacerda torfinnnome natstreet BergmanLab polivares orzenil kongl guhjy druvus n00c leemond31 nuin operon jasontsai jmeppley rdiaz michaelbarton Bioinformatics dswan reyez kshameer TRHvidsten djkt Journal picks ppgardne
	Aggressive assembly of pyrosequencing reads with mates [My Copy] Bioinformatics, Vol. 24, No. 24. (15 December 2008), pp. 2818-2824. by Jason R. Miller, Arthur L. Delcher, Sergey Koren, et al.Eli Venter, Brian P. Walenz, Anushka Brownley, Justin Johnson, Kelvin Li, Clark Mobarry, Granger Sutton posted by 20 people GustavoLacerda n00c APRegier jonilaserson dakelley idoerg orzenil ela503 natstreet druvus azazello acn jasontsai jmeppley BergmanLab cisevol SIMR bioinformatics malcook Neeperando djkt
	A Bioinformatician's Guide to Metagenomics [My Copy] Microbiol. Mol. Biol. Rev., Vol. 72, No. 4. (1 December 2008), pp. 557-578. by Victor Kunin, Alex Copeland, Alla Lapidus, Konstantinos Mavromatis, Philip Hugenholtz posted by 48 people Orengo Group Journal Picks CorinYeats sconlan jasontsai Shared Literature Resource of the Microbial Fitness Group - MPI Bremen halinat hwright michaelbarton taylor73 esyoun bluto idoerg hpaces iSEEM skembel inquil EKotlarska anphony stajich sharpton vrich Papers recommended by the Roscoff Plankton Group Microbial-Ecology vaulot adgrativol Translational Bioinformatics jakechen balicea dbk GustavoLacerda guhjy hessec fhalbrit Roswell Cancer Crosstalk Zephyrus anazhu dswan sjcockell Borelli druvus azazello kinestetika jmeppley neils microbiology_nijmegen Katje allysonlister skato_toyaku
	Swift: primary data analysis for the Illumina Solexa sequencing platform [My Copy] Bioinformatics, Vol. 25, No. 17. (1 September 2009), pp. 2194-2199. by Nava Whiteford, Tom Skelly, Christina Curtis, et al.Matt E. Ritchie, Andrea Lohr, Alexander W. Zaranek, Irina Abnizova, Clive Brown posted by 26 people heliopais hzoltan dakelley sotacam lh49 djkt rtogawa cassj Bioinformatics dswan torfinnnome rschulz BergmanLab natstreet druvus jasontsai jmeppley SIMR bioinformatics ghattem nuin polivares n00c aprasad Journal picks niallhaslam idoerg
	Inference of selection from multiple species alignments. [My Copy] Current opinion in genetics & development, Vol. 12, No. 6. (December 2002), pp. 688-694. by Z. Yang posted by 7 people katholt natstreet druvus gjuggler operon mingzhi friendpine
	Inference of bacterial microevolution using multilocus sequence data. [My Copy] Genetics, Vol. 175, No. 3. (1 March 2007), pp. 1251-1266. by X. Didelot, D. Falush posted by 8 people katholt druvus operon AaronDarling echinotrix Xavier CharlesM pcarbo
	Accuracy and quality of massively parallel DNA pyrosequencing [My Copy] Genome Biology, Vol. 8, No. 7. (20 July 2007), R143. by Susan Huse, Julie Huber, Hilary Morrison, Mitchell Sogin, David Welch posted by 21 people nfparrish druvus n00c iSEEM jlgreen Thaverkamp orzenil mmartin floatingpoint Huub_odc gpappas jmeppley mblwhoi grahamc azazello GustavoLacerda Bioinformatics blobbybirdman gatech-compgenomics Olaf_Ilzins bozdagd
	Relaxed Phylogenetics and Dating with Confidence [My Copy] PLoS Biol, Vol. 4, No. 5. (14 March 2006), e88. by Alexei J. Drummond, Simon Y. W. Ho, Matthew J. Phillips, Andrew Rambaut posted by 8 people lizbiogen katholt operon druvus alexeid brixtonmc AaronDarling redelings
	Hawkeye: an interactive visual analytics tool for genome assemblies [My Copy] Genome Biology, Vol. 8, No. 3. (09 March 2007), R34. by Michael Schatz, Adam Phillippy, Ben Shneiderman, Steven Salzberg posted by 14 people darian n00c joule Thaverkamp hpaces orzenil GustavoLacerda natstreet druvus stajich azazello Mycology gatech-compgenomics Neeperando
	Use and misuse of the gene ontology annotations [My Copy] Nature Reviews Genetics, Vol. 9, No. 7. (13 May 2008), pp. 509-515. by Seung Yon Rhee, Valerie Wood, Kara Dolinski, Sorin Draghici posted by 43 people epigenetics davidmam Thaverkamp druvus dullhunk 8_01 suizan dolchan Borelli Zephyrus VGreiff klo thomaskelder ilyashl phoenixzxl MarcoAlvarez isakemal bertelsen daforerog jfr djkt guhjy aheilbut mariakmejia cmzmasek A_Olympia logics of knowledge realzhang carlk roys gjuggler fpattyn RamuAnandakrishnan ptrobajo giovenko cabbagesofdoom tmmurali renatomilani capitall marck rvosa FAB-lab bpcusack
	Binning sequences using very sparse labels within a metagenome [My Copy] BMC Bioinformatics, Vol. 9, No. 1. (28 April 2008), 215. by Chon K. Chan, Arthur Hsu, Saman Halgamuge, Sen L. Tang posted by 17 people skembel esyoun sriesenfeld jmeppley dakelley Bioinformatics Thaverkamp idoerg azazello druvus alexl mjetten microbiology_nijmegen werwiesel jlgreen iSEEM djkt
	Genome assembly reborn: recent computational challenges [My Copy] Brief Bioinform, Vol. 10, No. 4. (1 July 2009), pp. 354-366. by Mihai Pop posted by 31 people hzoltan cthachuk GustavoLacerda n00c agbiotec shabhonam pachorip APRegier jmcq stevebs jonilaserson michaelbarton inesdesantiago GeeSharpMinor bertelsen aprasad ananta_samudra sandfire jmeppley mlangill fgibson Journal picks ppgardne TRHvidsten pengchy robsyme nuin kiekyon natstreet druvus idoerg
	Error bars in experimental biology [My Copy] J. Cell Biol., Vol. 177, No. 1. (9 April 2007), pp. 7-11. by Geoff Cumming, Fiona Fidler, David L. Vaux posted by 62 people Jporci pjmaybank inbetweener tt srmblack abhishek_tiwari druvus bangyuzhou schoeband brianb cambray dbikard rec3141 ajaymalik Gorzomagnificent daforerog sen_cheng yangjustinc maximilianh qwermish bayesian ntakano flips inesdesantiago brian ana batallah manduca kuhn Borelli dayjm kristina chad_davis tny dullhunk rabu lechristophe nelmor jdelcampo fishtank emmahe lisa1 Daria_G devender bmaust cabbagezs natstreet winterschlaefer krokicki loopback007 structural_bioinformatics Bioinformatics VisionLab FlowCytometry Microbial-Ecology wilbur tdmckee renatomilani delenca arindrartow guhjy mjoach
	De novo fragment assembly with short mate-paired reads: Does the read length matter? [My Copy] Genome Research, Vol. 19, No. 2. (3 February 2009), pp. 336-346. by Mark J. Chaisson, Dumitru Brinza, Pavel A. Pevzner posted by 19 people n00c carlk APRegier jandot jonilaserson natstreet dakelley jessopher orzenil AaronDarling sphsmith jasontsai nmohelli jbhiatt druvus hpaces GustavoLacerda Mycology stajich
	The McDonald-Kreitman Test and Slightly Deleterious Mutations [My Copy] Mol Biol Evol, Vol. 25, No. 6. (1 June 2008), pp. 1007-1015. by Jane Charlesworth, Adam Eyre-Walker posted by 11 people Garamonfok operon emptyhb druvus cabbagesofdoom gjuggler Stew stevanspringer stajich Mycology bpcusack
	Infernal 1.0: inference of RNA alignments. [My Copy] Bioinformatics (Oxford, England), Vol. 25, No. 10. (15 May 2009), pp. 1335-1337. by Eric P. Nawrocki, Diana L. Kolbe, Sean R. Eddy posted by 8 people reyez operon iSEEM djkt neils nuin natstreet druvus
	Improved repeat identification and masking in Dipterans. [My Copy] Gene, Vol. 389, No. 1. (1 March 2007), pp. 1-9. by Christopher D. Smith, Robert C. Edgar, Mark D. Yandell, et al.Douglas R. Smith, Susan E. Celniker, Eugene W. Myers, Gary H. Karpen posted by 6 people LabDros operon timflutre natstreet druvus PetrovLab
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