Thu, 07 Aug 2008 21:26:23 BST CiteULike: Author Tarleton http://www.citeulike.org/author/Tarleton CiteULike.org en-gb Copyright © 2004-2008 citeulike.org http://www.citeulike.org/user/hawri/article/3014301 <i>Physical Review A (Atomic, Molecular, and Optical Physics), Vol. 73, No. 6. (2006)</i><br /><br />We develop a theoretical treatment of polarization spectroscopy and use it to make predictions about the general form of polarization spectra in the alkali-metal atoms. Using our model, we generate theoretical spectra for the D2 transitions in 87Rb, 85Rb, and 133Cs. Experiments demonstrate that the model accurately reproduces spectra of transitions from the upper hyperfine level of the ground state only. Among these, the closed transition FF=F+1 dominates, with a steep gradient through line center ideally suited for use as a reference in laser locking. Polarization spectroscopy in rubidium and cesium ML Harris CS Adams SL Cornish IC Mcleod E Tarleton IG Hughes doi:10.1103/PhysRevA.73.062509 Physical Review A (Atomic, Molecular, and Optical Physics), Vol. 73, No. 6. (2006) 2008-07-17T12:58:30-00:00 2006 Physical Review A (Atomic, Molecular, and Optical Physics) 73 6 APS spectroscopy http://www.citeulike.org/user/fernan/article/311211 <i>Science, Vol. 309, No. 5733. (15 July 2005), pp. 409-415.</i><br /><br />Whole-genome sequencing of the protozoan pathogen Trypanosoma cruzi revealed that the diploid genome contains a predicted 22,570 proteins encoded by genes, of which 12,570 represent allelic pairs. Over 50% of the genome consists of repeated sequences, such as retrotransposons and genes for large families of surface molecules, which include trans-sialidases, mucins, gp63s, and a large novel family (>1300 copies) of mucin-associated surface protein (MASP) genes. Analyses of the T. cruzi, T. brucei, and Leishmania major (Tritryp) genomes imply differences from other eukaryotes in DNA repair and initiation of replication and reflect their unusual mitochondrial DNA. Although the Tritryp lack several classes of signaling molecules, their kinomes contain a large and diverse set of protein kinases and phosphatases; their size and diversity imply previously unknown interactions and regulatory processes, which may be targets for intervention. The Genome Sequence of Trypanosoma cruzi, Etiologic Agent of Chagas Disease Najib El-Sayed Peter Myler Daniella Bartholomeu Daniel Nilsson Gautam Aggarwal Anh-Nhi Tran Elodie Ghedin Elizabeth Worthey Arthur Delcher Gaelle Blandin Scott Westenberger Elisabet Caler Gustavo Cerqueira Carole Branche Brian Haas Atashi Anupama Erik Arner Lena Aslund Philip Attipoe Esteban Bontempi Frederic Bringaud Peter Burton Eithon Cadag David Campbell Mark Carrington Jonathan Crabtree Hamid Darban Jose da Silveira Pieter de Jong Kimberly Edwards Paul Englund Gholam Fazelina Tamara Feldblyum Marcela Ferella Alberto Frasch Keith Gull David Horn Lihua Hou Yiting Huang Ellen Kindlund Michele Klingbeil Sindy Kluge Hean Koo Daniela Lacerda Mariano Levin Hernan Lorenzi Tin Louie Carlos Machado Richard Mcculloch Alan Mckenna Yumi Mizuno Jeremy Mottram Siri Nelson Stephen Ochaya Kazutoyo Osoegawa Grace Pai Marilyn Parsons Martin Pentony Ulf Pettersson Mihai Pop Jose Ramirez Joel Rinta Laura Robertson Steven Salzberg Daniel Sanchez Amber Seyler Reuben Sharma Jyoti Shetty Anjana Simpson Ellen Sisk Martti Tammi Rick Tarleton Santuza Teixeira Susan Van Aken Christy Vogt Pauline Ward Bill Wickstead Jennifer Wortman Owen White Claire Fraser Kenneth Stuart Bjorn Andersson doi:10.1126/science.1112631 Science, Vol. 309, No. 5733. (15 July 2005), pp. 409-415. 2005-09-03T14:18:19-00:00 2005 Science 309 5733 409 415 cl-brener cruzi genome trypanosoma http://www.citeulike.org/user/pablomendes/article/1554748 <i>Nucleic Acids Res, Vol. 32, No. Database issue. (1 January 2004)</i><br /><br />TcruziDB (http://TcruziDB.org) is an integrated genome database for the parasitic organism Trypanosoma cruzi, the causative agent of Chagas' disease. The database currently incorporates all available sequence data (Genomic, BAC, EST) in a single user-friendly location. The database contains a variety of tools specifically designed for searching unannotated draft sequence via BLAST, keyword searches of pre-computed BLAST results, and protein motif searches. Release 1.0 of the database contains nearly 730 million bp of genome sequence from 1.1 million sequence reads generated by the TIGR-Karolinska-SBRI Trypanosoma cruzi Genome Consortium and 15 million bp of clustered EST and genomic sequence obtained from other sources. As annotation, microarray and proteomic data become available, the database will incorporate and integrate these data using the GUS (http://www.gusdb. org) relational framework. TcruziDB: an integrated Trypanosoma cruzi genome resource. M Luchtan C Warade DB Weatherly WM Degrave RL Tarleton JC Kissinger Nucleic Acids Res, Vol. 32, No. Database issue. (1 January 2004) 2007-08-11T23:37:52-00:00 2004 Nucleic Acids Res 1362-4962 32 Database issue database genome