Tag biophysics [at least 200 articles] Export

Recent papers classified by the tag biophysics.

	The role of DNA shape in protein-DNA recognition. [My Copy] Nature, Vol. 461, No. 7268. (29 October 2009), pp. 1248-1253. by Remo Rohs, Sean M. West, Alona Sosinsky, Peng Liu, Richard S. Mann, Barry Honig posted to protein_dna_interactions dna_shape biophysics by emptyhb on 2009-11-07 16:49:13 as along with 6 people sandersl Fernando_FF operon kintoki TRHvidsten djkt
	The directed cooperative assembly of proteorhodopsin into 2D and 3D polarized arrays [My Copy] Proceedings of the National Academy of Sciences, Vol. 104, No. 20. (15 May 2007), pp. 8212-8217. by Hongjun Liang, Gregg Whited, Chi Nguyen, Galen D. Stucky posted to self-assembly membranes biophysics bacteriorhodopsin by kevinchannon on 2009-11-05 17:55:19 as
	Dynamics of the unbound head during myosin V processive translocation [My Copy] Nat Struct Mol Biol, Vol. 14, No. 3. (11 March 2007), pp. 246-248. by Alexander R. Dunn, James A. Spudich posted to sms motors biophysics by samjlord to the group moernerlab on 2009-11-05 04:10:37 as along with 2 people marissalee melting
	Coupled Membrane Fluctuations and Protein Mobility in Supported Intermembrane Junctions [My Copy] The Journal of Physical Chemistry B, Vol. 110, No. 16. (1 April 2006), pp. 8513-8516. by Raghuveer Parthasarathy, Jay T. Groves posted to supported-bilayer immunological biophysics by samjlord on 2009-11-05 03:50:57 as
	Fluorescent Lifetime Trajectories of a Single Fluorophore Reveal Reaction Intermediates During Transcription Initiation [My Copy] Journal of the American Chemical Society, Vol. 131, No. 28. (22 July 2009), pp. 9630-9631. by Maria Sorokina, Hye-Ran Koh, Smita S. Patel, Taekjip Ha posted to sms enzymes biophysics by samjlord on 2009-11-04 19:06:45 as along with 3 people and 1 group alexfuerstenberg marissalee quanwang moernerlab
	Physical constraints and functional characteristics of transcription factorâDNA interaction [My Copy] Proceedings of the National Academy of Sciences of the United States of America, Vol. 99, No. 19. (17 September 2002), pp. 12015-12020. by Ulrich Gerland, J. David Moroz, Terence Hwa posted to protein_dna_interactions dna_binding biophysics by emptyhb on 2009-11-04 18:53:31 as along with 2 people and 1 group jstajic dquest TranscriptionalRegulationWithThermodynamicModels
	Oriented purple-membrane films as a probe for studies of the mechanism of bacteriorhodopsin functioning. II. Photoelectric processes [My Copy] Biochimica et Biophysica Acta (BBA) - Bioenergetics, Vol. 892, No. 1. (09 June 1987), pp. 56-67. by A. Kononenko, E. Lukashev, S. Chamorovsky, et al.A. Maximychev, S. Timashev, L. Chekulaeva, A. Rubin, V. Paschenko posted to photophysics biophysics bacteriorhodopsin by kevinchannon on 2009-11-03 11:29:41 as
	Evidence that the photoelectric response of bacteriorhodopsin occurs in less than 5 picoseconds [My Copy] Vol. 57, No. 5. (1 May 1990), pp. 1099-1101. by R. Simmeth, G. W. Rayfield posted to photovoltaics photophysics biophysics bacteriorhodopsin by kevinchannon on 2009-11-03 11:25:27 as
	Photocurrents Generated by Bacteriorhodopsin Adsorbed on Nano-Black Lipid Membranes [My Copy] Vol. 89, No. 2. (1 August 2005), pp. 1046-1054. by Christian Horn, Claudia Steinem posted to photovoltaics photophysics membranes biophysics biomolecular-electronics bacteriorhodopsin by kevinchannon on 2009-11-02 17:49:46 as
	Bacteriorhodopsin as an electronic conduction medium for biomolecular electronics. [My Copy] Chemical Society reviews, Vol. 37, No. 11. (November 2008), pp. 2422-2432. by Yongdong Jin, Tal Honig, Izhar Ron, Noga Friedman, Mordechai Sheves, David Cahen posted to review photovoltaics photosynthesis photophysics biophysics biomolecular-electronics bacteriorhodopsin by kevinchannon on 2009-11-02 15:30:21 as
	Cell adhesion: The effect of a surprising cohesive force [My Copy] Physical Review E (Statistical, Nonlinear, and Soft Matter Physics), Vol. 80, No. 4. (2009), 042901. by H. Vasseur posted to cell biophysics adhesion by danilov on 2009-10-31 20:28:17 as
	Rebuilding cytoskeleton roads: Active-transport-induced polarization of cells [My Copy] Physical Review E (Statistical, Nonlinear, and Soft Matter Physics), Vol. 80, No. 4. (2009), 040903. by R. J. Hawkins, O. Bénichou, M. Piel, R. Voituriez posted to spontaneous_polarization cell biophysics by danilov on 2009-10-31 20:19:34 as along with 1 person chiufanlee
	Individual dimers of the mitotic kinesin motor Eg5 step processively and support substantial loads in vitro [My Copy] Nat Cell Biol, Vol. 8, No. 5. (02 April 2006), pp. 470-476. by Megan T. Valentine, Polly M. Fordyce, Troy C. Krzysiak, Susan P. Gilbert, Steven M. Block posted to trapping sms motors biophysics by samjlord to the group moernerlab on 2009-10-29 23:58:24 as along with 1 person YC
	Structural biology: DNA binding shapes up [My Copy] Nature, Vol. 461, No. 7268. (28 October 2009), pp. 1225-1226. by Tom Tullius posted to dna biophysics by zeldin on 2009-10-29 09:11:52 as along with 1 person Fernando_FF
	Biophysics: All seeing eye [My Copy] Nature, Vol. 461, No. 7268. (28 October 2009), pp. 1177-1177. posted to biophysics by zeldin on 2009-10-29 09:11:42 as
	The physical chemistry of membrane curvature [My Copy] Nature Chemical Biology, Vol. 5, No. 11. (01 November 2009), pp. 783-784. by Jay T. Groves posted to review membrane biophysics by samjlord to the group moernerlab on 2009-10-29 06:24:13 as
	Investigating the robustness of the classical enzyme kinetic equations in small intracellular compartments [My Copy] (23 Oct 2009) by Ramon Grima posted to stochastic robustness noise kinetics intracellular enzyme biophysics by jjray on 2009-10-26 23:46:26 as along with 1 person apocapoc
	Fluctuations in Gene Regulatory Networks as Gaussian Colored Noise [My Copy] (23 Oct 2009) by Ming-Chang Huang, Jinn-Wen Wu, Yu-Pin Luo, Karen G. Petrosyan posted to stochastic noise network gene_regulation biophysics by jjray on 2009-10-26 23:42:58 as along with 1 person apocapoc
	Traffic control: regulation of kinesin motors [My Copy] Nature Reviews Molecular Cell Biology, Vol. 10, No. 11. (01 November 2009), pp. 765-777. by Kristen J. Verhey, Jennetta W. Hammond posted to review motors biophysics by samjlord to the group moernerlab on 2009-10-23 21:11:55 as
	Cross-Talk between Signaling Pathways Can Generate Robust Oscillations in Calcium and cAMP [My Copy] PLoS ONE, Vol. 4, No. 10. (21 October 2009), e7189. by Fernando Siso-Nadal, Jeffrey J. Fox, Stéphane A. Laporte, Terence E. Hébert, Peter S. Swain posted to signaling oscillation crosstalk biophysics by jjray on 2009-10-22 21:36:56 as
	Membrane heterogeneity - from lipid domains to curvature effects [My Copy] Soft Matter, Vol. 5, No. 17. (2009), pp. 3174-3186. by Stefan Semrau, Thomas Schmidt posted to membrane biophysics by samjlord to the group moernerlab on 2009-10-21 21:25:38 as along with 2 people cjryan sobolevnrm
	A bacterial ratchet motor [My Copy] (15 Oct 2009) by R. Di Leonardo, L. Angelani, G. Ruocco, et al.V. Iebba, M. P. Conte, S. Schippa, F. De Angelis, F. Mecarini, E. Di Fabrizio posted to self_assembly nanomachine biophysics bacteria by marinari on 2009-10-16 10:36:18 as
	Curved FtsZ protofilaments generate bending forces on liposome membranes [My Copy] The EMBO Journal, Vol. advance online publication (24 September 2009) by Masaki Osawa, David E. Anderson, Harold P. Erickson posted to ftsz biophysics bacteria by devinli on 2009-10-15 23:08:19 as
	Multi-species stochastic models: small RNA regulation of gene expression [My Copy] (13 Oct 2009) by Vlad Elgart posted to stochastic rna mathematical_model gene_regulation gene_expression biophysics by jjray on 2009-10-14 15:44:29 as
	Entanglement and intra-molecular cooling in biological systems? - A quantum thermodynamic perspective [My Copy] (5 Oct 2009) by Hans J. Briegel, Sandu Popescu posted to theory quantum_mechanics opinion biophysics by jjray on 2009-10-14 15:41:09 as along with 4 people and 1 group fry09 A_Olympia Scis0000002 aleperd logics of knowledge
	Theoretical examination of quantum coherence in a photosynthetic system at physiological temperature [My Copy] Proceedings of the National Academy of Sciences, Vol. 106, No. 41. (13 October 2009), pp. 17255-17260. by Akihito Ishizaki, Graham R. Fleming posted to theory quantum_mechanics biophysics by jjray on 2009-10-14 15:33:52 as
	Functionalization of Silicon Nanowires with Actomyosin Motor Protein for Bioinspired Nanomechanical Applications [My Copy] Small, Vol. 9999, No. 9999. (2009), NA. by Kyung-Eun Byun, Kwang Heo, Sojung Shim, Heon-Jin Choi, Seunghun Hong posted to biophysics by zeldin on 2009-10-14 11:51:52 as along with 1 person richardfranzese
	Ab-initio Dynamics of Rare Thermally Activated Reactions [My Copy] (29 Sep 2009) by Beccara, G. Garberoglio, P. Faccioli, F. Pederiva posted to stochastic quantum_mechanics langevin dynamics chemical_reaction chemical_physics biophysics by jjray on 2009-10-13 19:37:31 as
	On (Schröedinger's) quest for new physics for life [My Copy] (7 Oct 2009) by Alfredo Iorio posted to theory physics opinion biophysics by jjray on 2009-10-13 19:31:13 as
	Biophysical dissection of membrane proteins [My Copy] Nature, Vol. 459, No. 7245. (20 May 2009), pp. 344-346. by Stephen H. White posted to review imp biophysics by rph on 2009-10-10 01:05:12 as along with 9 people and 3 groups amoszlj girayenkavi ColumbusLabs viktor21614 kevinchannon hsekiguc barry sobolevnrm paulschlesinger structural_bioinformatics McCammon baker-group
	Thermodynamics of Unfolding of β-Trypsin at pH 2.8 [My Copy] Archives of Biochemistry and Biophysics, Vol. 382, No. 1. (01 October 2000), pp. 57-62. by M. Nasser Brumano posted to thermodynamics protein-folding mathematics denaturation biophysics by kevinchannon on 2009-10-09 13:48:56 as
	Stability of phage T4 lysozymes I. Native properties and thermal stability of wild type and two mutant lysozymes [My Copy] Biochimica et Biophysica Acta (BBA) - Protein Structure, Vol. 494, No. 2. (26 October 1977), pp. 367-383. by M. Elwell, J. Schellman posted to thermodynamics phage mathematics kinetics denaturation biophysics by kevinchannon on 2009-10-09 13:44:38 as
	Thermodynamic Limit of a Nonequilibrium Steady State: Maxwell-Type Construction for a Bistable Biochemical System [My Copy] Physical Review Letters, Vol. 103, No. 14. (2009), 148103. by Hao Ge, Hong Qian posted to thermodynamics steady_state non-equilibrium bistability biophysics biochemistry by jjray on 2009-10-05 19:45:28 as along with 1 person bertelsen
	Probing noise in gene expression and protein production [My Copy] Physical Review E (Statistical, Nonlinear, and Soft Matter Physics), Vol. 80, No. 3. (2009), 031916. by Sandro Azaele, Jayanth R. Banavar, Amos Maritan posted to stochastic noise gene_expression dynamics biophysics by jjray on 2009-09-30 21:58:35 as along with 2 people docv bertelsen
	Long delay times in reaction rates increase intrinsic fluctuations [My Copy] Physical Review E (Statistical, Nonlinear, and Soft Matter Physics), Vol. 80, No. 3. (2009), 031129. by Matthew Scott posted to stochastic noise dynamics delay biophysics by jjray on 2009-09-30 21:55:38 as
	Amplification and detection of single-molecule conformational fluctuation through a protein interaction network with bimodal distributions. [My Copy] The journal of physical chemistry. B, Vol. 113, No. 36. (10 September 2009), pp. 12375-12381. by Zhanghan Wu, Vlad Elgart, Hong Qian, Jianhua Xing posted to timescale protein_interactions network distribution conformational_dynamics biophysics by jjray on 2009-09-28 17:18:34 as
	Membrane biophysics [My Copy] Current Biology, Vol. 16, No. 8. (18 April 2006), pp. R272-R276. by Joshua Zimmerberg posted to review membrane biophysics by samjlord to the group moernerlab on 2009-09-28 06:21:23 as along with 2 people quanwang ARobson
	The mechanical cell [My Copy] Current Biology, Vol. 19, No. 17. (15 September 2009), pp. R745-R748. by Shang-You Tee, Andreas R. Bausch, Paul A. Janmey posted to review cell-biology biophysics biomechanics by samjlord to the group moernerlab on 2009-09-28 06:10:48 as
	Pairwise Maximum Entropy Models for Studying Large Biological Systems: When They Can Work and When They Can't [My Copy] PLoS Comput Biol, Vol. 5, No. 5. (8 May 2009), e1000380. by Yasser Roudi, Sheila Nirenberg, Peter E. Latham posted to reconstruction inverse_problem entropy biophysics by marinari on 2009-09-23 16:23:36 as along with 8 people rdiaz josepe fbaroni bayesian robsyme flips paulschlesinger pengchy
	Intracellular fluid flow in rapidly moving cells [My Copy] Nature Cell Biology, Vol. advance online publication (20 September 2009) by Kinneret Keren, Patricia T. Yam, Anika Kinkhabwala, Alex Mogilner, Julie A. Theriot posted to tracking-diffusion cell-biology biophysics by samjlord to the group moernerlab on 2009-09-22 18:36:46 as
	Biophysical techniques for ligand screening and drug design. [My Copy] Current opinion in pharmacology (4 July 2009) by Jean-Paul P. Renaud, Marc-André A. Delsuc posted to protein_structure protein_sequence protein_regions protein-design peptides peptide-binding peptide modelling biophysics by niallhaslam on 2009-09-22 09:50:29 as along with 1 person ubcg08l
	Non-neutral theory of biodiversity [My Copy] (10 Mar 2009) by Ginestra Bianconi, Luca Ferretti, Silvio Franz posted to phase_transition ecosystem biophysics biodiversity bak_sneppen by marinari on 2009-09-21 14:12:17 as
	Modeling the formation of in vitro filopodia [My Copy] (14 Sep 2009) by K. C. Lee, A. Gopinathan, J. M. Schwarz posted to biophysics by danilov on 2009-09-21 08:45:47 as
	Conserved Functions of Membrane Active GTPases in Coated Vesicle Formation [My Copy] Science, Vol. 325, No. 5945. (4 September 2009), pp. 1217-1220. by Thomas J. Pucadyil, Sandra L. Schmid posted to review membrane biophysics by samjlord on 2009-09-16 23:03:17 as along with 2 people cjryan barry
	Repressor Lattice: Feedback, Commensurability, and Dynamical Frustration [My Copy] Physical Review Letters, Vol. 103, No. 11. (2009), 118101. by Mogens H. Jensen, Sandeep Krishna, Simone Pigolotti posted to spatial network lattice gene_regulation feedback dynamical_system biophysics by jjray on 2009-09-11 18:04:43 as
	Mediation, Modulation, and Consequences of Membrane-Cytoskeleton Interactions [My Copy] Annual Review of Biophysics, Vol. 37, No. 1. (2008), pp. 65-95. by Gary J. Doherty, Harvey T. McMahon posted to review modulation membrane mediation mechanistic invivo interactions human disease cytoskeleton cell-migration biophysics biology by bertelsen on 2009-09-11 13:21:10 as along with 1 person guhjy
	Recovery of free energy branches in single molecule experiments [My Copy] (25 Jan 2009) by Ivan Junier, Alessandro Mossa, Maria Manosas, Felix Ritort posted to work_measurement tweezer single_molecule free_energy biophysics by marinari on 2009-09-10 11:41:51 as
	Maximally informative pairwise interactions in networks [My Copy] (3 Sep 2009) by Jeffrey D. Fitzgerald, Tatyana O. Sharpee posted to pairwise_interaction network_node network maximum_entropy_model entropy biophysics biological_network by marinari on 2009-09-09 11:09:21 as
	Control of Antigen Presentation with a Photoreleasable Agonist Peptide [My Copy] Journal of the American Chemical Society, Vol. 128, No. 48. (1 December 2006), pp. 15354-15355. by Andrew L. DeMond, Toby Starr, Michael L. Dustin, Jay T. Groves posted to photochemistry immunological biophysics biomimetic by samjlord to the group moernerlab on 2009-09-08 22:15:53 as
	Work distribution in manipulated single biomolecules [My Copy] (17 Jan 2009) by A. Imparato, L. Peliti posted to single_molecule biophysics by marinari on 2009-09-08 15:12:20 as

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review	130
rna	128
folding	88
sms	82
bioinformatics	75
protein_structure	55
dna	54
motors	54
computational_biology	48
membrane	45
structure	44
evolution	42
single-molecule	41
secondary_structure	36
structure_prediction	36
stochastic	35
force	33
mathematical_model	31
afm	30
protein	29
statistical_potentials	27
spectroscopy	26
super-resolution	25
noise	24
sequence_alignment	24
tracking-diffusion	24
gene_regulation	22
microscopy	22
molecular	22
dynamics	21
thermodynamics	21
biochemistry	20
physics	20
proteins	20
ab-initio	18
biology	17
kinetics	17
protein-unfolding	16
protein_folding	16
bacteria_flagella_project	15
comparative_modeling	15
foce_field	15
model_assessment	15
molecular_dynamics	15
theory	15
cell-sorting	14
bioconjugation	13
biological-structures	13
network	13
chromatin	12
systems-biology	12
transcription	12
bacteria	11
lipid	11
model	11
algorithms	10
bioelectromagnetics	10
bioengineering	10
classification	10
fcs	10
fluorophores	10
photoswitchable	10
quantum-biology	10
docking	9
fret	9
kinesin	9
organisms	9
photophysics	9
protein_threading	9
rotamers	9
simulation	9
2009_nserc_usra	8
diffusion	8
dynamic	8
imaging	8
magnetic	8
master	8
membranes	8
readout	8
signaling	8
allosteric	7
book	7
fluorescence	7
gene_expression	7
microtubules	7
transport	7
water	7
adhesion	6
amphiphiles	6
beads	6
cells	6
clustering	6
computation	6
dynamical_system	6
gfp	6
microspheres	6
motion	6
particle	6
protein_function	6
sensor	6

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