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	PathExpress update: the enzyme neighbourhood method of associating gene-expression data with metabolic pathways. [My Copy] Nucleic acids research, Vol. 37, No. Web Server issue. (1 July 2009), pp. W335-339. by Nicolas Goffard, Tancred Frickey, Georg Weiller posted to metabolism book_em by cgaugain on 2009-09-07 09:38:46 as along with 1 person guhjy
	Toward systematic metabolic engineering based on the analysis of metabolic regulation by the integration of different levels of information [My Copy] Biochemical Engineering Journal, Vol. 46, No. 3. (01 November 2009), pp. 235-251. by Kazuyuki Shimizu posted to book_em by cgaugain on 2009-08-28 10:24:28 as
	Growth control of the eukaryote cell: a systems biology study in yeast. [My Copy] Journal of biology, Vol. 6, No. 2. (30 April 2007), 4. by Juan I. Castrillo, Leo A. Zeef, David C. Hoyle, et al.Nianshu Zhang, Andrew Hayes, David C. Gardner, Michael J. Cornell, June Petty, Luke Hakes, Leanne Wardleworth, Bharat Rash, Marie Brown, Warwick B. Dunn, David Broadhurst, Kerry O'Donoghue, Svenja S. Hester, Tom P. Dunkley, Sarah R. Hart, Neil Swainston, Peter Li, Simon J. Gaskell, Norman W. Paton, Kathryn S. Lilley, Douglas B. Kell, Stephen G. Oliver posted to book_em by cgaugain on 2009-08-27 17:02:08 as along with 13 people and 1 group mqbphcw3 schwartzjmc neilswainston michaelbarton aalibes alexg dullhunk balabu dylan77 cabbagezs Stew roys alanrw EisenLab
	A joint model of regulatory and metabolic networks [My Copy] BMC Bioinformatics, Vol. 7, No. 1. (04 July 2006), 332. by Chen H. Yeang, Martin Vingron posted to book_em by cgaugain on 2009-08-27 17:00:54 as along with 6 people chasmand ptrobajo schwartzjmc alexg cgaray roys
	A Proteome Analysis of the Cadmium Response in Saccharomyces cerevisiae [My Copy] J. Biol. Chem., Vol. 276, No. 11. (9 March 2001), pp. 8469-8474. by Karin Vido, Daniel Spector, Gilles Lagniel, Sebastien Lopez, Michel B. Toledano, Jean Labarre posted to thesis book_em by cgaugain on 2009-08-27 16:58:56 as
	A general definition of metabolic pathways useful for systematic organization and analysis of complex metabolic networks [My Copy] Nat Biotech, Vol. 18, No. 3. (March 2000), pp. 326-332. by Stefan Schuster, David A. Fell, Thomas Dandekar posted to thesis metabolism book_em by cgaugain on 2009-08-27 16:56:34 as along with 5 people and 1 group schwartzjmc camster dragonrez Borelli madhadron dbk-lab
	Theory for the Systemic Definition of Metabolic Pathways and their use in Interpreting Metabolic Function from a Pathway-Oriented Perspective [My Copy] Journal of Theoretical Biology, Vol. 203, No. 3. (07 April 2000), pp. 229-248. by C. Schilling posted to book_em by cgaugain on 2009-08-27 16:54:18 as along with 2 people schwartzjmc alexg
	A computational approach to measuring coherence of gene expression in pathways [My Copy] Genomics, Vol. 84, No. 1. (July 2004), pp. 211-217. by Howard H. Yang, Ying Hu, Kenneth H. Buetow, Maxwell P. Lee posted to book_em by cgaugain on 2009-08-27 16:51:11 as
	KEGG: Kyoto Encyclopedia of Genes and Genomes [My Copy] Nucl. Acids Res., Vol. 28, No. 1. (1 January 2000), pp. 27-30. by Minoru Kanehisa, Susumu Goto posted to metabolism book_em by cgaugain on 2009-08-27 16:47:33 as along with 20 people mauriceccy akshayk jeremymiller VGreiff karinlag sgoetz namunet csanford dquest j3xucite fisherp koerner ruvido noby naegele katerinakal grottenolm Evangelia natstreet jerome_ucsf_slb
	Multiple high-throughput analyses monitor the response of E. coli to perturbations. [My Copy] Science (New York, N.Y.), Vol. 316, No. 5824. (27 April 2007), pp. 593-597. by Nobuyoshi Ishii, Kenji Nakahigashi, Tomoya Baba, et al.Martin Robert, Tomoyoshi Soga, Akio Kanai, Takashi Hirasawa, Miki Naba, Kenta Hirai, Aminul Hoque, Pei Yee Y. Ho, Yuji Kakazu, Kaori Sugawara, Saori Igarashi, Satoshi Harada, Takeshi Masuda, Naoyuki Sugiyama, Takashi Togashi, Miki Hasegawa, Yuki Takai, Katsuyuki Yugi, Kazuharu Arakawa, Nayuta Iwata, Yoshihiro Toya, Yoichi Nakayama, Takaaki Nishioka, Kazuyuki Shimizu, Hirotada Mori, Masaru Tomita posted to book_em by cgaugain on 2009-08-27 16:44:10 as along with 8 people and 1 group JeremyZucker ynaito thomaskelder jjray raiyar dylan77 ytoya IgorG steinmetzlab
	PathExpress: a web-based tool to identify relevant pathways in gene expression data [My Copy] Nucl. Acids Res., Vol. 35, No. suppl_2. (13 July 2007), pp. W176-181. by Nicolas Goffard, Georg Weiller posted to book_em by cgaugain on 2009-08-27 16:41:18 as along with 5 people and 1 group daforerog guhjy jfr ealloza AlexanderPico BioinfoCIPF
	Genomic analysis of metabolic pathway gene expression in mice [My Copy] Genome Biology, Vol. 6, No. 7. (2005), R59. by Anatole Ghazalpour, Sudheer Doss, Sonal Sheth, et al.Leslie I. Drake, Eric Schadt, Aldons Lusis, Thomas Drake posted to book_em by cgaugain on 2009-08-27 16:39:12 as
	Coordinated concentration changes of transcripts and metabolites in Saccharomyces cerevisiae. [My Copy] PLoS computational biology, Vol. 5, No. 1. (30 January 2009), e1000270. by Patrick H. Bradley, Matthew J. Brauer, Joshua D. Rabinowitz, Olga G. Troyanskaya posted to book_em by cgaugain on 2009-08-27 16:35:56 as along with 2 people agomez roys
	Post-transcriptional Expression Regulation in the Yeast Saccharomyces cerevisiae on a Genomic Scale [My Copy] Mol Cell Proteomics, Vol. 3, No. 11. (1 November 2004), pp. 1083-1092. by Andreas Beyer, Jens Hollunder, Heinz-Peter Nasheuer, Thomas Wilhelm posted to book_em by cgaugain on 2009-08-27 16:33:27 as along with 3 people schwartzjmc roys michaelbarton
	Comparing protein abundance and mRNA expression levels on a genomic scale [My Copy] Genome Biology, Vol. 4, No. 9. (2003), 117. by Dov Greenbaum, Christopher Colangelo, Kenneth Williams, Mark Gerstein posted to book_em by cgaugain on 2009-08-27 16:30:09 as along with 6 people and 1 group mgomes windman83 jo_davies penka JeremyZucker roys Nie
	Hierarchical thinking in network biology: the unbiased modularization of biochemical networks [My Copy] Trends in Biochemical Sciences, Vol. 29, No. 12. (December 2004), pp. 641-647. by J. Papin, J. Reed, B. Palsson posted to network module metabolism book_em by cgaugain on 2009-08-21 16:45:32 as along with 4 people and 3 groups lflorez camster korakot alexg Philosophy_of_Information dbk-lab Blog_and_Wiki_Research
	KEGG spider: interpretation of genomics data in the context of the global gene metabolic network [My Copy] Genome Biology, Vol. 9, No. 12. (2008), R179. by Alexey Antonov, Sabine Dietmann, Hans Mewes posted to metabolism book_em by cgaugain on 2009-08-21 11:06:03 as along with 15 people and 2 groups bertelsen Thaverkamp ptrobajo jfr bluto sylvainforet Stew Cortel Zephyrus guhjy neils cmzmasek fgibson dullhunk druvus Bioinformatics - CRUK Roswell Cancer Crosstalk
	Metabolic pathways in the post-genome era [My Copy] Trends in Biochemical Sciences, Vol. 28, No. 5. (May 2003), pp. 250-258. by J. Papin posted to book_em integration thesis by cgaugain on 2009-08-03 14:59:22 as along with 4 people pjmaybank lflorez eweaver tny
	Integrating ‘omic’ information: a bridge between genomics and systems biology [My Copy] Trends in Genetics, Vol. 19, No. 10. (October 2003), pp. 551-560. by Hui Ge, Albertha J. M. Walhout, Marc Vidal posted to book_em integration thesis by cgaugain on 2009-07-30 09:22:11 as along with 2 people maburkitt maralena
	From genomes to systems: the path with yeast. [My Copy] Philosophical transactions of the Royal Society of London. Series B, Biological sciences, Vol. 361, No. 1467. (29 March 2006), pp. 477-482. by S. G. Oliver posted to book_em yeast by cgaugain on 2009-07-07 12:02:45 as along with 3 people schwartzjmc alexg dullhunk
	An Introduction to Metabolic Networks and Their Structural Analysis [My Copy] IEEE/ACM Transactions on Computational Biology and Bioinformatics In Computational Biology and Bioinformatics, IEEE/ACM Transactions on, Vol. 5, No. 4. (2008), pp. 594-617. by Vincent Lacroix, Ludovic Cottret, Patricia Thébault, Marie F. Sagot posted to structure review network modularity metabolism community-detection book_em by cgaugain on 2009-07-06 09:11:14 as along with 4 people ptrobajo yujiangwang nsamways AbnerCYH
	Integration of genomic and metabonomic data in systems biology--are we 'there' yet? [My Copy] Current opinion in drug discovery & development, Vol. 9, No. 1. (January 2006), pp. 92-100. by C. E. Thomas, G. Ganji posted to book_em by cgaugain on 2009-06-26 18:19:38 as
	Correlation network analysis for data integration and biomarker selection. [My Copy] Molecular bioSystems, Vol. 4, No. 3. (March 2008), pp. 249-259. by A. Adourian, E. Jennings, R. Balasubramanian, et al.W. M. Hines, D. Damian, T. N. Plasterer, C. B. Clish, P. Stroobant, R. McBurney, E. R. Verheij, I. Bobeldijk, J. van der Greef, J. Lindberg, K. Kenne, U. Andersson, H. Hellmold, K. Nilsson, H. Salter, I. Schuppe-Koistinen posted to book_em by cgaugain on 2009-06-26 18:13:43 as along with 2 people guhjy aconesa
	A systems biology approach to study glucose repression in the yeast Saccharomyces cerevisiae. [My Copy] Biotechnology and bioengineering, Vol. 96, No. 1. (1 January 2007), pp. 134-145. by Steen Lund L. Westergaard, Ana Paula P. Oliveira, Christoffer Bro, Lisbeth Olsson, Jens Nielsen posted to book_em metabolism by cgaugain on 2009-06-04 15:19:07 as along with 1 person mqbphcw3
	Flux balance analysis of a genome-scale yeast model constrained by exometabolomic data allows metabolic system identification of genetically different strains. [My Copy] Biotechnol Prog, Vol. 23, No. 2. (r 2007), pp. 320-326. by T. Cakir, C. Efe, D. Dikicioglu, A. Hortaçsu, B. Kirdar, S. G. Oliver posted to book_em metabolism by cgaugain on 2009-06-04 15:16:18 as along with 4 people JeremyZucker schwartzjmc michaelbarton alexg
	Pathway mapping tools for analysis of high content data. [My Copy] Methods in molecular biology (Clifton, N.J.), Vol. 356 (2007), pp. 319-350. by S. Ekins, Y. Nikolsky, A. Bugrim, E. Kirillov, T. Nikolskaya posted to book_em metabolism review by cgaugain on 2009-06-04 14:56:45 as along with 3 people and 1 group thomaskelder shikin AlexanderPico GeneGo
	A systems biology approach for pathway level analysis [My Copy] Genome Research, Vol. 17, No. 10. (4 October 2007), pp. 1537-1545. by Sorin Draghici, Purvesh Khatri, Adi L. Tarca, et al.Kashyap Amin, Arina Done, Calin Voichita, Constantin Georgescu, Roberto Romero posted to book_em metabolism thesis by cgaugain on 2009-06-04 11:19:42 as along with 22 people and 2 groups zufar bertelsen tonamswish gbloeb ptrobajo pengchy tmmurali dragonrez jfr gurkanbebek grahamc shigepong zwang cabbagezs cerami xingxu shikin idonaldson Pao-Yang thomaskelder heliopais AlexanderPico Bioinformatics OPIG
	Observing metabolic functions at the genome scale [My Copy] Genome Biology, Vol. 8 (26 June 2007), R123. by Jean-Marc Schwartz, Claire Gaugain, Jose C. Nacher, Antoine de Daruvar, Minoru Kanehisa posted to book_em integration thesis by cgaugain on 2008-11-26 14:26:02 as along with 1 person schwartzjmc