Tag breakpoints [18 articles] Export

Recent papers classified by the tag breakpoints.

	Pindel: a pattern growth approach to detect break points of large deletions and medium sized insertions from paired-end short reads. [My Copy] Bioinformatics (Oxford, England), Vol. 25, No. 21. (1 November 2009), pp. 2865-2871. by Kai Ye, Marcel H. Schulz, Quan Long, Rolf Apweiler, Zemin Ning posted to short-read pindel paired-end breakpoints by n00c on 2009-10-22 19:40:11 as along with 6 people darian torfinnnome dakelley natstreet druvus vplagnol
	Distinct retroelement classes define evolutionary breakpoints demarcating sites of evolutionary novelty. [My Copy] BMC genomics, Vol. 10, No. 1. (24 July 2009), 334. by Mark S. Longo, Dawn M. Carone, NISC Comparative Sequencing Program, Eric D. Green, Michael J. O'Neill, Rachel J. O'Neill posted to evolution breakpoints by nuin on 2009-09-22 14:36:10 as along with 1 person aprasad
	Analysis of fine-scale mammalian evolutionary breakpoints provides new insight into their relation to genome organisation [My Copy] BMC Genomics, Vol. 10, No. 1. (24 July 2009), 335. by Claire Lemaitre, Lamia Zaghloul, Marie F. Sagot, et al.Christian Gautier, Alain Arneodo, Eric Tannier, Benjamin Audit posted to genomics evolution breakpoints analysis by nuin on 2009-09-22 14:35:41 as along with 1 person jandot
	Inferring progression models for CGH data [My Copy] Bioinformatics, Vol. 25, No. 17. (1 September 2009), pp. 2208-2215. by Jun Liu, Nirmalya Bandyopadhyay, Sanjay Ranka, M. Baudis, Tamer Kahveci posted to cancer breakpoints by davfre on 2009-08-23 16:07:37 as along with 5 people sameersoi pkonings rdiaz nuin bgordski
	GR-Aligner: an algorithm for aligning pairwise genomic sequences containing rearrangement events [My Copy] Bioinformatics, Vol. 25, No. 17. (1 September 2009), pp. 2188-2193. by Te-Chin Chu, Tsunglin Liu, D. T. Lee, Greg C. Lee, Arthur C. Shih posted to sequencing rearrangements breakpoints alignment by torfinnnome on 2009-08-20 10:52:29 as along with 3 people n00c nlapalu jmeppley
	A sequence-level map of chromosomal breakpoints in the MCF-7 breast cancer cell line yields insights into the evolution of a cancer genome [My Copy] Genome Research, Vol. 19, No. 2. (9 February 2009), pp. 167-177. by Oliver A. Hampton, Petra Den Hollander, Christopher A. Miller, et al.David A. Delgado, Jian Li, Cristian Coarfa, Ronald A. Harris, Stephen Richards, Steven E. Scherer, Donna M. Muzny, Richard A. Gibbs, Adrian V. Lee, Aleksandar Milosavljevic posted to breakpoints breast cancer celllines sequencing by chrisamiller on 2009-06-05 01:16:34 as along with 6 people and 2 groups burak myzhang jiezhou renatomilani songpku Zephyrus Roswell Cancer Crosstalk Breast Cancer Reading Club
	Breakpoint regions and homologous synteny blocks in chromosomes have different evolutionary histories. [My Copy] Genome research (2 April 2009) by Denis M M. Larkin, Greg Pape, Ravikiran Donthu, Loretta Auvil, Michael Welge, Harris A A. Lewin posted to breakpoints development evolution synteny by davfre on 2009-05-04 11:07:44 as along with 2 people xianjun maximilianh
	Over half of breakpoints in gene pairs involved in cancer-specific recurrent translocations are mapped to human chromosomal fragile sites [My Copy] BMC Genomics, Vol. 10 (30 January 2009), 59. by Allison, Yuh-Hwa Wang posted to breakpoints cancer fusion genomic instability by chrisamiller on 2009-02-03 19:21:59 as
	Dissection of a circumscribed recombination hot spot in HIV-1 after a single infectious cycle. [My Copy] The Journal of biological chemistry, Vol. 281, No. 5. (3 February 2006), pp. 2711-2720. by R. Galetto, V. Giacomoni, M. Véron, M. Negroni posted to breakpoints hotspot recombination by mishar on 2009-01-17 21:51:47 as
	Sequence determinants of breakpoint location during HIV-1 intersubtype recombination. [My Copy] Nucleic acids research, Vol. 34, No. 18. (2006), pp. 5203-5216. by H. A. Baird, R. Galetto, Y. Gao, et al.E. Simon-Loriere, M. Abreha, J. Archer, J. Fan, D. L. Robertson, E. J. Arts, M. Negroni posted to breakpoints recombination by mishar on 2009-01-17 21:29:38 as
	A fast algorithm for the multiple genome rearrangement problem with weighted reversals and transpositions [My Copy] BMC Bioinformatics, Vol. 9 (04 December 2008), 516. by Martin, Enno Ohlebusch posted to breakpoints rearrangement reconstruction by Neeperando on 2008-12-04 21:08:59 as along with 2 people and 1 group nuin cisevol BergmanLab
	Systematic prediction and validation of breakpoints associated with copy-number variants in the human genome. [My Copy] Proceedings of the National Academy of Sciences of the United States of America, Vol. 104, No. 24. (12 June 2007), pp. 10110-10115. by J. O. Korbel, A. E. Urban, F. Grubert, et al.J. Du, T. E. Royce, P. Starr, G. Zhong, B. S. Emanuel, S. M. Weissman, M. Snyder, M. B. Gerstein posted to breakpoints cnv genome hmm human by waszak on 2008-10-08 14:58:45 as along with 3 people jrvalcourt caldavis oelemento
	Breakpoint locations within chromosomes 1, 2, and 4 of patients with increased radiosensitivity. [My Copy] Cancer genetics and cytogenetics, Vol. 168, No. 1. (1 July 2006), pp. 1-10. by S. Schilling, U. Keller, C. N. Sprung, et al.A. Weise, G. G. Grabenbauer, R. Sauer, L. Distel posted to breakpoints by ryonfa on 2008-10-01 14:43:06 as
	Multi-Break Rearrangements and Breakpoint Re-Uses: From Circular to Linear Genomes. [My Copy] Journal of computational biology : a journal of computational molecular cell biology (12 September 2008) by Max A A. Alekseyev posted to breakpoints genome by nuin on 2008-09-19 15:42:09 as along with 1 person AaronDarling
	Mapping translocation breakpoints by next-generation sequencing [My Copy] Genome Research, Vol. 18, No. 7. (7 July 2008), pp. 1143-1149. by Wei Chen, Vera Kalscheuer, Andreas Tzschach, et al.Corinna Menzel, Reinhard Ullmann, Marcel H. Schulz, Fikret Erdogan, Na Li, Zofia Kijas, Ger Arkesteijn, Isidora L. Pajares, Margret Goetz-Sothmann, Uwe Heinrich, Imma Rost, Andreas Dufke, Ute Grasshoff, Birgitta Glaeser, Martin Vingron, Hilger H. Ropers posted to breakpoints map next-gen-sequencing thesis by Neeperando on 2008-07-31 15:18:35 as along with 8 people n00c darian stubrown sameersoi nuin usagi-kirin caseybrown APRegier
	Precise detection of rearrangement breakpoints in mammalian chromosomes [My Copy] BMC Bioinformatics, Vol. 9, No. 1. (2008) by Claire Lemaitre, Eric Tannier, Christian Gautier, Marie F. Sagot posted to breakpoints detection chromosome by nuin on 2008-07-30 17:45:43 as along with 5 people and 1 group daveGerrard alivahdat cisevol Neeperando timflutre BergmanLab
	Identification of somatically acquired rearrangements in cancer using genome-wide massively parallel paired-end sequencing. [My Copy] Nature genetics, Vol. 40, No. 6. (27 June 2008), pp. 722-729. by Peter J. Campbell, Philip J. Stephens, Erin D. Pleasance, et al.Sarah O'Meara, Heng Li, Thomas Santarius, Lucy A. Stebbings, Catherine Leroy, Sarah Edkins, Claire Hardy, Jon W. Teague, Andrew Menzies, Ian Goodhead, Daniel J. Turner, Christopher M. Clee, Michael A. Quail, Antony Cox, Clive Brown, Richard Durbin, Matthew E. Hurles, Paul A. Edwards, Graham R. Bignell, Michael R. Stratton, P. Andrew Futreal posted to breakpoints cancer esp genomics nextgen structural by chrisamiller on 2008-06-26 21:54:22 as along with 12 people chvlyl dakelley APRegier myzhang jessopher frohike smiddha xingxu daed matthewsuderman jfr caseybrown
	Is mammalian chromosomal evolution driven by regions of genome fragility? [My Copy] Genome Biology, Vol. 7 (08 December 2006), R115. by Aurora R. Herrera, Jose Castresana, Terence J. Robinson posted to breakpoints genome_evolution tandem_duplications by aprasad on 2007-04-17 15:32:37 as along with 1 person and 1 group Ayest Bioinformatics

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cancer	4
evolution	4
structural	4
alignment	3
cnv	3
genome	3
rearrangement	3
development	2
genomics	2
hmm	2
human	2
recombination	2
sequencing	2
short-read	2
synteny	2
thesis	2
variation	2
analysis	1
breast	1
celllines	1
centromere	1
chromosome	1
detection	1
esp	1
fusion	1
genome_evolution	1
genomic	1
hotspot	1
human_genome	1
instability	1
map	1
next-gen-sequencing	1
nextgen	1
nisc	1
paired-end	1
pindel	1
rearrangements	1
reconstruction	1
retrotransposon	1
tandem_duplications	1

Tag breakpoints [18 articles] Export

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