Tag chipseq [74 articles] Export

Recent papers classified by the tag chipseq.

	Genome-wide mapping of SMAD target genes reveals the role of BMP signaling in embryonic stem cell fate determination [My Copy] Genome Research (19 November 2009) by Teng Fei, Kai Xia, Zhongwei Li, et al.Bing Zhou, Shanshan Zhu, Hua Chen, Jianping Zhang, Zhang Chen, Huasheng Xiao, Jing-Dong J. Han, Ye-Guang Chen posted to chipseq by maximilianh on 2009-11-26 11:53:52 as
	Computation for ChIP-seq and RNA-seq studies. [My Copy] Nature methods, Vol. 6, No. 11 Suppl. (15 November 2009), pp. S22-S32. by Shirley Pepke, Barbara Wold, Ali Mortazavi posted to transcriptomics chipseq bioinformatics by molnet-mna on 2009-11-17 16:49:58 as along with 23 people and 2 groups urgi Jporci pst epigenetics timflutre Vincent_Rouilly guhjy cajunsushi mpizbioinfo stubrown hzoltan robertrentzsch xingxu oannes74 tonamswish inesdesantiago Baschl polivares jwfoley druvus GeeSharpMinor chvlyl heliopais molnet-macs Orengo Group Journal Picks
	An oestrogen-receptor-alpha-bound human chromatin interactome. [My Copy] Nature, Vol. 462, No. 7269. (5 November 2009), pp. 58-64. by Melissa J. Fullwood, Mei Hui H. Liu, You Fu F. Pan, et al.Jun Liu, Han Xu, Yusoff Bin B. Mohamed, Yuriy L. Orlov, Stoyan Velkov, Andrea Ho, Poh Huay H. Mei, Elaine G. Chew, Phillips Yao Hui Y. Huang, Willem-Jan J. Welboren, Yuyuan Han, Hong Sain S. Ooi, Pramila N. Ariyaratne, Vinsensius B. Vega, Yanquan Luo, Peck Yean Y. Tan, Pei Ye Y. Choy, Senali Abayratna D. Wansa, Bing Zhao, Kar Sian S. Lim, Shi Chi C. Leow, Jit Sin S. Yow, Roy Joseph, Haixia Li, Kartiki V. Desai, Jane S. Thomsen, Yew Kok K. Lee, R. Krishna Murthy Karuturi, Thoreau Herve, Guillaume Bourque, Hendrik G. Stunnenberg, Xiaoan Ruan, Valere Cacheux-Rataboul, Wing-Kin K. Sung, Edison T. Liu, Chia-Lin L. Wei, Edwin Cheung, Yijun Ruan posted to technology chipseq by fenghezi on 2009-11-06 19:48:00 as along with 4 people chvlyl mkiyer gdb TRHvidsten
	CEAS: cis-regulatory element annotation system [My Copy] Bioinformatics, Vol. 25, No. 19. (1 October 2009), pp. 2605-2606. by Hyunjin Shin, Tao Liu, Arjun K. Manrai, X. Shirley Liu posted to websites chipseq by maximilianh on 2009-11-04 13:41:58 as along with 5 people druvus ewilban1 guhjy idonaldson nuin
	Extracting transcription factor targets from ChIP-Seq data [My Copy] Nucl. Acids Res., Vol. 37, No. 17. (1 September 2009), e113. by Geetu Tuteja, Peter White, Jonathan Schug, Klaus H. Kaestner posted to chipseq bioinfo by mfgreen on 2009-10-31 05:46:50 as along with 14 people and 4 groups hzoltan Vincent_Rouilly ewilban1 idonaldson guhjy mkiyer rschulz fenghezi clearbluespring thegoose robeirne inesdesantiago malcook polivares Chinnaiyan Lab SIMR bioinformatics BergmanLab Journal picks
	Molecular interactions between HNF4a, FOXA2 and GABP identified at regulatory DNA elements through ChIP-sequencing [My Copy] Nucl. Acids Res. (12 October 2009), gkp823. by Ola Wallerman, Mehdi Motallebipour, Stefan Enroth, et al.Kalicharan Patra, Madhu S. Bysani, Jan Komorowski, Claes Wadelius posted to chipseq by fenghezi on 2009-10-19 19:22:47 as
	Genomic determination of the glucocorticoid response reveals unexpected mechanisms of gene regulation [My Copy] Genome Research, Vol. 19, No. 12. (2 December 2009), pp. 2163-2171. by Timothy E. Reddy, Florencia Pauli, Rebekka O. Sprouse, et al.Norma F. Neff, Kimberly M. Newberry, Michael J. Garabedian, Richard M. Myers posted to geneexp chipseq by fenghezi on 2009-10-19 17:29:04 as along with 1 person djkt
	Uncovering Early Response of Gene Regulatory Networks in ESCs by Systematic Induction of Transcription Factors [My Copy] Cell Stem Cell, Vol. 5, No. 4. (02 October 2009), pp. 420-433. by Akira Nishiyama, Li Xin, Alexei A. Sharov, et al.Marshall Thomas, Gregory Mowrer, Emily Meyers, Yulan Piao, Samir Mehta, Sarah Yee, Yuhki Nakatake posted to geneexp development chipseq by fenghezi on 2009-10-05 18:52:39 as
	BayesPeak: Bayesian analysis of ChIP-seq data [My Copy] BMC Bioinformatics, Vol. 10, No. 1. (2009), 299. by Christiana Spyrou, Rory Stark, Andy Lynch, Simon Tavare posted to technology chipseq by fenghezi on 2009-10-05 18:37:49 as along with 11 people and 4 groups Vincent_Rouilly tonamswish dswan inesdesantiago idonaldson polivares mkiyer druvus stajich humburg rschulz Bioinformatics JLab BergmanLab Mycology
	ChIP-seq: advantages and challenges of a maturing technology. [My Copy] Nature reviews. Genetics, Vol. 10, No. 10. (08 October 2009), pp. 669-680. by Peter J. Park posted to review chipseq chip-seq by akundaje on 2009-09-27 03:22:00 as along with 24 people and 6 groups akakak hzoltan dchughes RyuOgawa heliopais giovenko inesdesantiago pradiptaray dakelley clearbluespring rdiaz kimorley leliavski humburg reyez qayub fenghezi tonamswish robertrentzsch polivares idonaldson rschulz cvaldes danmaclean Journal picks Orengo Group Journal Picks JLab BergmanLab CTCF Chromatin
	Identifying regulatory elements in eukaryotic genomes [My Copy] Brief Funct Genomic Proteomic, Vol. 8, No. 4. (1 July 2009), pp. 215-230. by Leelavati Narlikar, Ivan Ovcharenko posted to ngs motif chromatin chipseq by natstreet on 2009-09-14 09:05:47 as along with 3 people and 1 group daveGerrard ppgardne idonaldson Journal picks
	ChIP-seq accurately predicts tissue-specific activity of enhancers [My Copy] Nature, Vol. 457, No. 7231. (12 February 2009), pp. 854-858. by Axel Visel, Matthew J. Blow, Zirong Li, et al.Tao Zhang, Jennifer A. Akiyama, Amy Holt, Ingrid Plajzer-Frick, Malak Shoukry, Crystal Wright, Feng Chen, Veena Afzal, Bing Ren, Edward M. Rubin, Len A. Pennacchio posted to transcription_fractor chipseq by ewilban1 on 2009-09-08 19:09:12 as along with 23 people and 2 groups hzoltan tonamswish samanthacooper ashkelon13 isimpson gdb dnewburger jochenG bertelsen oelemento rpatward cajunsushi WanderingAengus absterga provero cassj anphony dpollard caseybrown biomcgary xingxu idonaldson djkt RockmanLab cis-regulatory-evolution
	Chromatin poises miRNA- and protein-coding genes for expression. [My Copy] Genome research, Vol. 19, No. 10. (27 October 2009), pp. 1742-1751. by Artem Barski, Raja Jothi, Suresh Cuddapah, et al.Kairong Cui, Tae-Young Y. Roh, Dustin E. Schones, Keji Zhao posted to smallrna rnaseq histonemodification chipseq by fenghezi on 2009-09-04 20:32:05 as along with 9 people and 2 groups tonamswish heliopais samgj polivares megraw inesdesantiago fpattyn djkt idonaldson microRNA Neuroblastoma
	Using ChIP-chip and ChIP-seq to study the regulation of gene expression: genome-wide localization studies reveal widespread regulation of transcription elongation. [My Copy] Methods (San Diego, Calif.), Vol. 48, No. 4. (9 August 2009), pp. 398-408. by Daniel A. Gilchrist, David C. Fargo, Karen Adelman posted to rna_polymerase review chipseq by ewilban1 on 2009-08-28 19:59:08 as along with 5 people fpattyn guhjy inesdesantiago sebastien_vigneau idonaldson
	ChIP-Seq of ER\|[alpha]\| and RNA polymerase II defines genes differentially responding to ligands [My Copy] EMBO J, Vol. 28, No. 10. (04 April 2009), pp. 1418-1428. by Willem-Jan Welboren, Marc A. van Driel, Eva M. Janssen-Megens, et al.Simon J. van Heeringen, Fred C. G. J. Sweep, Paul N. Span, Hendrik G. Stunnenberg posted to rna_polymerase chipseq by ewilban1 on 2009-08-28 19:58:45 as along with 1 person tonamswish
	Four histone variants mark the boundaries of polycistronic transcription units in Trypanosoma brucei. [My Copy] Genes & development, Vol. 23, No. 9. (1 May 2009), pp. 1063-1076. by T. Nicolai Siegel, Doeke R. Hekstra, Louise E. Kemp, et al.Luisa M. Figueiredo, Joanna E. Lowell, David Fenyo, Xuning Wang, Scott Dewell, George A. Cross posted to trypanosome histone chipseq by ewilban1 on 2009-08-28 19:58:23 as along with 1 person clearbluespring
	Mapping accessible chromatin regions using Sono-Seq. [My Copy] Proceedings of the National Academy of Sciences of the United States of America, Vol. 106, No. 35. (18 August 2009), pp. 14926-14931. by Raymond K. Auerbach, Ghia Euskirchen, Joel Rozowsky, et al.Nathan Lamarre-Vincent, Zarmik Moqtaderi, Philippe Lefrançois, Kevin Struhl, Mark Gerstein, Michael Snyder posted to chromatin chipseq background by ewilban1 on 2009-08-28 19:17:18 as along with 3 people and 1 group sebastien_vigneau fenghezi polivares JLab
	Whole-Genome Mapping of Histone H3 Lys4 and 27 Trimethylations Reveals Distinct Genomic Compartments in Human Embryonic Stem Cells [My Copy] Cell Stem Cell, Vol. 1, No. 3. (13 September 2007), pp. 286-298. by X. Zhao, X. Han, J. Chew, et al.J. Liu, K. Chiu, A. Choo, Y. Orlov, W. Sung, A. Shahab, V. Kuznetsov posted to nextgen histone chipseq by stubrown on 2009-08-26 15:58:43 as along with 3 people RyuOgawa inesdesantiago jernst
	Global mapping of H3K4me3 and H3K27me3 reveals specificity and plasticity in lineage fate determination of differentiating CD4+ T cells. [My Copy] Immunity, Vol. 30, No. 1. (16 January 2009), pp. 155-167. by Gang Wei, Lai Wei, Jinfang Zhu, et al.Chongzhi Zang, Jane Hu-Li, Zhengju Yao, Kairong Cui, Yuka Kanno, Tae-Young Y. Roh, Wendy T. Watford, Dustin E. Schones, Weiqun Peng, Hong-Wei W. Sun, William E. Paul, John J. O'Shea, Keji Zhao posted to nextgen histone chipseq by stubrown on 2009-08-26 15:57:49 as along with 1 person ashkelon13
	Genomic tools for dissecting oncogenic transcriptional networks in human leukemia [My Copy] Leukemia, Vol. 23, No. 7. (22 January 2009), pp. 1236-1242. by T. Palomero, A. A. Ferrando posted to transcriptionfactor review nextgen histone chipseq by stubrown on 2009-08-25 19:43:10 as along with 1 person abizar
	Impact of chromatin structures on DNA processing for genomic analyses. [My Copy] PloS one, Vol. 4, No. 8. (20 August 2009), e6700. by Leonid Teytelman, Bilge Ozaydin, Oliver Zill, et al.Philippe Lefrançois, Michael Snyder, Jasper Rine, Michael B. Eisen posted to chipseq by stajich to the group Mycology on 2009-08-24 16:38:31 as along with 5 people and 3 groups inesdesantiago fenghezi lthorrez polivares humburg JLab CTCF BergmanLab
	Insights from genomic profiling of transcription factors [My Copy] Nature Reviews Genetics, Vol. 10, No. 9. (11 August 2009), pp. 605-616. by Peggy J. Farnham posted to transcriptionfactor review nextgen chipseq by stubrown on 2009-08-21 20:37:28 as along with 17 people and 2 groups heliopais inesdesantiago fenghezi nklee samanthacooper fpattyn druvus frohike qayub megraw TRHvidsten mkiyer ericrpaquet ilyashl jbhiatt idonaldson danmaclean Journal picks Chinnaiyan Lab
	High-resolution profiling of histone methylations in the human genome. [My Copy] Cell, Vol. 129, No. 4. (18 May 2007), pp. 823-837. by Artem Barski, Suresh Cuddapah, Kairong Cui, et al.Tae-Young Y. Roh, Dustin E. Schones, Zhibin Wang, Gang Wei, Iouri Chepelev, Keji Zhao posted to nextgen keypaper histone chipseq by stubrown on 2009-08-20 02:04:10 as along with 22 people and 2 groups rsaito darian tonamswish fpattyn hagechouchin443 absterga ewilban1 suizifish jochenG caseybrown raylim jernst giovenko guhjy kengg sebastien_vigneau jackjackjjj ghattem epigenetics ksha inesdesantiago dquest JLab Plantandetc
	Genome-wide profiles of STAT1 DNA association using chromatin immunoprecipitation and massively parallel sequencing [My Copy] Nature Methods, Vol. 4, No. 8. (11 June 2007), pp. 651-657. by Gordon Robertson, Martin Hirst, Matthew Bainbridge, et al.Misha Bilenky, Yongjun Zhao, Thomas Zeng, Ghia Euskirchen, Bridget Bernier, Richard Varhol, Allen Delaney, Nina Thiessen, Obi L. Griffith, Ann He, Marco Marra, Michael Snyder, Steven Jones posted to transcriptionfactor nextgen keypaper chipseq by stubrown on 2009-08-19 17:10:38 as along with 13 people and 1 group absterga samanthacooper ewilban1 fpattyn polivares caseybrown guhjy vega kengg ghattem slevy03 dquest raiyar Plantandetc
	Identifying Positioned Nucleosomes with Epigenetic Marks in Human from ChIP-Seq [My Copy] BMC Genomics, Vol. 9, No. 1. (2008), 537. by Yong Zhang, Hyunjin Shin, Jun Song, Ying Lei, X. Shirley Liu posted to software nucleosome-position nextgen histone chipseq by stubrown on 2009-08-19 17:06:48 as along with 6 people antonkratz hagechouchin443 inesdesantiago polivares idonaldson caseybrown
	A clustering approach for identification of enriched domains from histone modification ChIP-Seq data [My Copy] Bioinformatics, Vol. 25, No. 15. (1 August 2009), pp. 1952-1958. by Chongzhi Zang, Dustin E. Schones, Chen Zeng, Kairong Cui, Keji Zhao, Weiqun Peng posted to software nextgen histone chipseq by stubrown on 2009-08-19 17:04:05 as along with 12 people and 2 groups hzoltan hagechouchin443 ashraya cassj guhjy humburg ewilban1 gdb inesdesantiago fenghezi ghattem polivares SIMR bioinformatics BergmanLab
	Comparative study on ChIP-seq data: normalization and binding pattern characterization [My Copy] Bioinformatics, Vol. 25, No. 18. (15 September 2009), pp. 2334-2340. by Cenny Taslim, Jiejun Wu, Pearlly Yan, et al.Greg Singer, Jeffrey Parvin, Tim Huang, Shili Lin, Kun Huang posted to software normalization nextgen chipseq by stubrown on 2009-08-19 14:36:44 as along with 8 people and 2 groups Stew tonamswish inesdesantiago ewilban1 guhjy mkiyer humburg rschulz Bioinformatics - CRUK Chinnaiyan Lab
	Design and analysis of ChIP-seq experiments for DNA-binding proteins. [My Copy] Nature biotechnology, Vol. 26, No. 12. (16 December 2008), pp. 1351-1359. by Peter V. Kharchenko, Michael Y. Tolstorukov, Peter J. Park posted to software review nextgen chipseq by stubrown on 2009-08-19 05:54:54 as along with 19 people and 2 groups hzoltan guhjy gdb tonamswish ewilban1 coela ekotelnikova jfr floatingpoint idonaldson inesdesantiago WanderingAengus vplagnol xwbcn fpattyn mutagenic kengg rschulz ghattem KCL & UCL Bioinformatics SIMR bioinformatics
	Genome-wide identification of DNA-protein interactions using chromatin immunoprecipitation coupled with flow cell sequencing. [My Copy] The Journal of endocrinology, Vol. 201, No. 1. (1 April 2009), pp. 1-13. by Brad G. Hoffman, Steven J. Jones posted to review nextgen chipseq by stubrown on 2009-08-19 05:53:40 as along with 3 people inesdesantiago guhjy abizar
	An integrated software system for analyzing ChIP-chip and ChIP-seq data. [My Copy] Nature biotechnology, Vol. 26, No. 11. (02 November 2008), pp. 1293-1300. by Hongkai Ji, Hui Jiang, Wenxiu Ma, David S. Johnson, Richard M. Myers, Wing H. Wong posted to software nextgen cisgenome chipseq by stubrown on 2009-08-19 05:45:12 as along with 24 people and 3 groups hzoltan fpattyn isimpson huali tonamswish ewilban1 sebastien_vigneau jfr kmdaily cassj bryankr malcook rschulz mcm behindtherabbit psique renatomilani polivares guhjy inesdesantiago pengchy kengg bais idonaldson Neuroblastoma SIMR bioinformatics BenosLab
	Genomic location analysis by ChIP-Seq [My Copy] Journal of Cellular Biochemistry, Vol. 107, No. 1. (1 May 2009), pp. 11-18. by Artem Barski, Keji Zhao posted to review nextgen chipseq by stubrown on 2009-08-19 05:44:29 as along with 9 people Vincent_Rouilly guhjy hagechouchin443 tonamswish humburg ewilban1 talponer cassj polivares
	Model-based Analysis of ChIP-Seq (MACS) [My Copy] Genome Biology, Vol. 9, No. 9. (2008), R137. by Yong Zhang, Tao Liu, Clifford Meyer, et al.Jerome Eeckhoute, David Johnson, Bradley Bernstein, Chad Nussbaum, Richard Myers, Myles Brown, Wei Li, X. Shirley Liu posted to software nextgen macs chipseq by stubrown on 2009-08-19 05:43:24 as along with 24 people and 2 groups hzoltan Vincent_Rouilly darian mkiyer humburg cassj floatingpoint WanderingAengus bryankr jfr rschulz mcm polivares gdb ghattem yadadi djkt stajich mdperry fpattyn bcondon idonaldson caseybrown kengg SIMR bioinformatics Mycology
	Genome-wide maps of chromatin state in pluripotent and lineage-committed cells. [My Copy] Nature, Vol. 448, No. 7153. (2 August 2007), pp. 553-560. by Tarjei S. Mikkelsen, Manching Ku, David B. Jaffe, et al.Biju Issac, Erez Lieberman, Georgia Giannoukos, Pablo Alvarez, William Brockman, Tae-Kyung K. Kim, Richard P. Koche, William Lee, Eric Mendenhall, Aisling O'Donovan, Aviva Presser, Carsten Russ, Xiaohui Xie, Alexander Meissner, Marius Wernig, Rudolf Jaenisch, Chad Nusbaum, Eric S. Lander, Bradley E. Bernstein posted to nextgen histone chipseq by stubrown on 2009-08-19 05:42:29 as along with 19 people and 1 group hkuhn RyuOgawa ewilban1 tonamswish gdb guhjy brant dchughes vega kengg vplagnol olympos epigenetics bioyang cabbagezs rschulz slevy03 jasonflannick inesdesantiago EisenLab
	Inherent Signals in Sequencing-Based Chromatin-ImmunoPrecipitation Control Libraries [My Copy] PLoS ONE, Vol. 4, No. 4. (15 April 2009), e5241. by Vinsensius B. Vega, Edwin Cheung, Nallasivam Palanisamy, Wing-Kin Sung posted to input_control chipseq by ewilban1 on 2009-08-14 22:12:18 as along with 1 person gdb
	Sequence census methods for functional genomics [My Copy] Nature Methods, Vol. 5, No. 1. (19 December 2007), pp. 19-21. by Barbara Wold, Richard M. Myers posted to chipseq technology by fenghezi on 2009-08-04 15:41:51 as along with 3 people seb1 guhjy balicea
	Stability of histone modifications across mammalian genomes: implications for 'epigenetic' marking. [My Copy] Journal of cellular biochemistry, Vol. 108, No. 1. (1 September 2009), pp. 22-34. by Benjamin M. Lee, Louis C. Mahadevan posted to chipseq histonemodification by fenghezi on 2009-07-31 21:21:23 as along with 1 person guhjy
	An embryonic stem cell chromatin remodeling complex, esBAF, is an essential component of the core pluripotency transcriptional network. [My Copy] Proceedings of the National Academy of Sciences of the United States of America, Vol. 106, No. 13. (31 March 2009), pp. 5187-5191. by Lena Ho, Raja Jothi, Jehnna L. Ronan, Kairong Cui, Keji Zhao, Gerald R. Crabtree posted to chipseq peakcaller tiroe by ewilban1 on 2009-07-30 19:47:10 as along with 2 people and 1 group wsjames shikin Oxford Virology
	H3.3/H2A.Z double variant-containing nucleosomes mark 'nucleosome-free regions' of active promoters and other regulatory regions [My Copy] Nat Genet, Vol. 41, No. 8. (August 2009), pp. 941-945. by Chunyuan Jin, Chongzhi Zang, Gang Wei, et al.Kairong Cui, Weiqun Peng, Keji Zhao, Gary Felsenfeld posted to chipseq histonemodification by fenghezi on 2009-07-29 16:03:59 as along with 7 people aprickett gbloeb hagechouchin443 cvaldes leliavski megraw djkt
	GeneTrack--a genomic data processing and visualization framework [My Copy] Bioinformatics, Vol. 24, No. 10. (15 May 2008), pp. 1305-1306. by Istvan Albert, Shinichiro Wachi, Cizhong Jiang, B. Franklin Pugh posted to chipseq genetrack peakcaller by ewilban1 on 2009-07-22 23:52:14 as along with 6 people tonamswish cassj zhouyu wisdom_love guhjy inesdesantiago
	Genome-wide approaches to studying chromatin modifications. [My Copy] Nature reviews. Genetics, Vol. 9, No. 3. (March 2008), pp. 179-191. by Dustin E. Schones, Keji Zhao posted to chipseq rev by ewilban1 on 2009-07-13 20:23:24 as along with 15 people clearbluespring athma hkuhn geniac epigenetics inesdesantiago tmmurali dchughes vega zwang cabbagezs idonaldson faion bpcusack guhjy
	Genome-wide relationship between histone H3 lysine 4 mono- and tri-methylation and transcription factor binding [My Copy] Genome Research, Vol. 18, No. 12. (3 December 2008), pp. 1906-1917. by A. Gordon Robertson, Mikhail Bilenky, Angela Tam, et al.Yongjun Zhao, Thomas Zeng, Nina Thiessen, Timothee Cezard, Anthony P. Fejes, Elizabeth D. Wederell, Rebecca Cullum, Ghia Euskirchen, Martin Krzywinski, Inanc Birol, Michael Snyder, Pamela A. Hoodless, Martin Hirst, Marco A. Marra, Steven J. M. Jones posted to chipseq findpeaks histone by ewilban1 on 2009-07-07 19:52:02 as along with 8 people tonamswish humburg gdb natstreet raylim maximilianh jernst cpreviti
	Genome-Wide uH2A Localization Analysis Highlights Bmi1-Dependent Deposition of the Mark at Repressed Genes [My Copy] PLoS Genet, Vol. 5, No. 6. (5 June 2009), e1000506. by Eric M. Kallin, Ru Cao, Raja Jothi, et al.Kai Xia, Kairong Cui, Keji Zhao, Yi Zhang posted to chipseq peakcaller tiroe by ewilban1 on 2009-07-07 19:01:42 as along with 1 person fenghezi
	Visualization of genomic data with the Hilbert curve [My Copy] Bioinformatics, Vol. 25, No. 10. (15 May 2009), pp. 1231-1235. by Simon Anders posted to bioinformatics chipseq genome-viewer visualization by ewilban1 on 2009-07-07 18:44:56 as along with 15 people and 1 group Yanno jfr jandot polivares inesdesantiago djkt behindtherabbit guhjy humburg Thaverkamp svenrahmann jmeppley idonaldson rdiaz paszkows BergmanLab
	E2F in vivo binding specificity: Comparison of consensus versus nonconsensus binding sites [My Copy] Genome Research, Vol. 18, No. 11. (3 November 2008), pp. 1763-1777. by Alina Rabinovich, Victor X. Jin, Roman Rabinovich, Xiaoqin Xu, Peggy J. Farnham posted to chipseq motif by fenghezi on 2009-06-30 18:21:46 as along with 1 person idonaldson
	The Level of the Transcription Factor Pax6 Is Essential for Controlling the Balance between Neural Stem Cell Self-Renewal and Neurogenesis [My Copy] PLoS Genet, Vol. 5, No. 6. (12 June 2009), e1000511. by Stephen N. Sansom, Dean S. Griffiths, Andrea Faedo, et al.Dirk-Jan Kleinjan, Youlin Ruan, James Smith, Veronica van Heyningen, John L. Rubenstein, Frederick J. Livesey posted to chipseq development by fenghezi on 2009-06-17 23:22:45 as along with 1 person djkt
	FAIRE (Formaldehyde-Assisted Isolation of Regulatory Elements) isolates active regulatory elements from human chromatin [My Copy] Genome Research, Vol. 17, No. 6. (19 June 2007), pp. 877-885. by Paul G. Giresi, Jonghwan Kim, Ryan M. McDaniell, Vishwanath R. Iyer, Jason D. Lieb posted to bias chipseq chromatin faire by ewilban1 on 2009-06-05 01:18:45 as along with 5 people and 1 group sf11 aprasad dpollard olympos uz_labu_laimi EisenLab
	From sextant to GPS: twenty-five years of mapping the genome with ChIP. [My Copy] Journal of cellular biochemistry, Vol. 107, No. 1. (1 May 2009), pp. 6-10. by D. A. Wacker, T. H. Kim posted to chipseq review by ewilban1 on 2009-05-27 22:41:04 as along with 1 person guhjy
	Hierarchical hidden Markov model with application to joint analysis of ChIP-chip and ChIP-seq data. [My Copy] Bioinformatics (Oxford, England), Vol. 25, No. 14. (15 July 2009), pp. 1715-1721. by Hyungwon Choi, Alexey I. Nesvizhskii, Debashis Ghosh, Zhaohui S. Qin posted to chipseq hierarchical hmm metachip by ewilban1 on 2009-05-27 22:29:40 as along with 12 people and 1 group jfr tonamswish rdiaz fpattyn jcbarret guhjy hendrik85 inesdesantiago nklee polivares idonaldson humburg Journal picks
	How to map billions of short reads onto genomes [My Copy] Nature Biotechnology, Vol. 27, No. 5. (01 May 2009), pp. 455-457. by Cole Trapnell, Steven L. Salzberg posted to chipseq smallrna technology by fenghezi on 2009-05-13 22:17:25 as along with 29 people and 5 groups burak cthachuk hzoltan tonamswish heliopais giovenko jfr torfinnnome daforerog jonilaserson mkiyer Annab darian polivares ghattem kiekyon n00c GeeSharpMinor guhjy nuin reyez orzenil Thaverkamp natstreet druvus Stew inesdesantiago idonaldson neils Bioinformatics Chinnaiyan Lab BergmanLab SIMR bioinformatics Bioinformatics - CRUK
	Target Genes of the MADS Transcription Factor SEPALLATA3: Integration of Developmental and Hormonal Pathways in the <italic>Arabidopsis</italic> Flower [My Copy] PLoS Biol, Vol. 7, No. 4. (21 April 2009), e1000090. by Kerstin Kaufmann, Jose M. Muiño, Ruy Jauregui, et al.Chiara A. Airoldi, Cezary Smaczniak, Pawel Krajewski, Gerco C. Angenent posted to chipseq peakcaller by ewilban1 on 2009-05-12 19:25:50 as along with 1 person rs

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seq	1
sissrs	1
smad1	1
sox2	1
stat3	1
tcfcp21	1
transcription-factors	1
transcription_fractor	1
transcriptomics	1
useq	1
websites	1
xset	1
yeast	1
zfx	1

Tag chipseq [74 articles] Export

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