Tag clip2 [55 articles] Export

Recent papers classified by the tag clip2.

	A network biology approach to aging in yeast [My Copy] Proceedings of the National Academy of Sciences, Vol. 106, No. 4. (27 January 2009), pp. 1145-1150. by David R. Lorenz, Charles R. Cantor, James J. Collins posted to analysis clip2 gene_expression network by cactus on 2009-04-01 08:05:38 as along with 4 people TRHvidsten rdiaz bcondon brianb
	Friction laws at the nanoscale [My Copy] Nature, Vol. 457, No. 7233. (26 February 2009), pp. 1116-1119. by Yifei Mo, Kevin T. Turner, Izabela Szlufarska posted to clip2 md physics simulation by cactus on 2009-03-11 08:45:11 as along with 1 person pick600
	Pulsed contractions of an actinmyosin network drive apical constriction [My Copy] Nature (23 November 2008) by Adam C. Martin, Matthias Kaschube, Eric F. Wieschaus posted to cell clip2 experiment by cactus on 2009-02-02 08:39:26 as along with 2 people TheoBioPhys TeamAC2009
	Real-Time DNA Sequencing from Single Polymerase Molecules [My Copy] Science, Vol. 323, No. 5910. (2 January 2009), pp. 133-138. by John Eid, Adrian Fehr, Jeremy Gray, et al.Khai Luong, John Lyle, Geoff Otto, Paul Peluso, David Rank, Primo Baybayan, Brad Bettman, Arkadiusz Bibillo, Keith Bjornson, Bidhan Chaudhuri, Frederick Christians, Ronald Cicero, Sonya Clark, Ravindra Dalal, Alex deWinter, John Dixon, Mathieu Foquet, Alfred Gaertner, Paul Hardenbol, Cheryl Heiner, Kevin Hester, David Holden, Gregory Kearns, Xiangxu Kong, Ronald Kuse, Yves Lacroix, Steven Lin, Paul Lundquist, Congcong Ma, Patrick Marks, Mark Maxham, Devon Murphy, Insil Park, Thang Pham, Michael Phillips, Joy Roy, Robert Sebra, Gene Shen, Jon Sorenson, Austin Tomaney, Kevin Travers, Mark Trulson, John Vieceli, Jeffrey Wegener, Dawn Wu, Alicia Yang, Denis Zaccarin, Peter Zhao, Frank Zhong, Jonas Korlach, Stephen Turner posted to clip2 dna-polymerase experiment fluorescent single_molecule visualization by cactus on 2009-01-20 06:21:51 as along with 37 people and 3 groups operon n00c kinestetika mtagaya jlgreen dna idoerg absterga lukzky ImranRaoufMalik Archaeogenetics inesdesantiago 7ac5 wimufi jasontsai mlangill melting polivares pkonings natstreet fhalbrit druvus felsani samjlord Stew ghattem nedwards myzhang pengchy jbhiatt GeeSharpMinor GustavoLacerda azazello sconlan alexknight emptyhb caseybrown iSEEM moernerlab Bioinformatics - CRUK
	Structure and Functional Role of Dynein's Microtubule-Binding Domain [My Copy] Science, Vol. 322, No. 5908. (12 December 2008), pp. 1691-1695. by Andrew P. Carter, Joan E. Garbarino, Elizabeth M. Wilson-Kubalek, et al.Wesley E. Shipley, Carol Cho, Ronald A. Milligan, Ronald D. Vale, I. R. Gibbons posted to clip2 dynein experiment motor structure xray-crystal-structure by cactus on 2009-01-19 09:29:31 as along with 4 people ClaireFBBurns zwang hsekiguc kshundyak
	Transcription inactivation through local refolding of the RNA polymerase structure [My Copy] Nature (22 October 2008) by Georgiy A. Belogurov, Marina N. Vassylyeva, Anastasiya Sevostyanova, et al.James R. Appleman, Alan X. Xiang, Ricardo Lira, Stephen E. Webber, Sergiy Klyuyev, Evgeny Nudler, Irina Artsimovitch, Dmitry G. Vassylyev posted to clip2 experiment folding inhibitor protein rna-polymerase structure xray-crystal-structure by cactus on 2009-01-19 08:55:37 as
	Direct characterization of amyloidogenic oligomers by single-molecule fluorescence [My Copy] Proceedings of the National Academy of Sciences, Vol. 105, No. 38. (23 September 2008), pp. 14424-14429. by Angel Orte, Neil R. Birkett, Richard W. Clarke, Glyn L. Devlin, Christopher M. Dobson, David Klenerman posted to aggregation amyloid clip2 experiment fluorescent by cactus on 2008-12-17 08:01:51 as along with 3 people JesperSP quanwang chiufanlee
	Structural changes of membrane-anchored native PrPC [My Copy] Proceedings of the National Academy of Sciences, Vol. 105, No. 31. (2008), pp. 10815-10819. by Kerstin Elfrink, Julian Ollesch, Jan Stöhr, Dieter Willbold, Detlev Riesner, Klaus Gerwert posted to clip2 dimerization experiment membrane prion protein by cactus on 2008-12-17 06:26:52 as along with 1 person scampos
	Structure of a complex of the ATPase SecA and the protein-translocation channel [My Copy] Nature, Vol. 455, No. 7215., pp. 936-943. by Jochen Zimmer, Yunsun Nam, Tom A. Rapoport posted to channel clip2 protein seca xray-crystal-structure by cactus on 2008-10-29 08:55:15 as along with 4 people lukzky lpierce zwang neils
	Structural biology: Clamour for a kiss [My Copy] Nature, Vol. 455, No. 7215. (15 October 2008), pp. 879-880. by Anastassios Economou posted to channel clip2 news-and-view protein seca xray-crystal-structure by cactus on 2008-10-29 08:54:25 as
	Visualizing transient events in amino-terminal autoprocessing of HIV-1 protease [My Copy] Nature, Vol. 455, No. 7213. (2 October 2008), pp. 693-696. by Chun Tang, John M. Louis, Annie Aniana, Jeong-Yong Suh, Marius G. Clore posted to allostery clip2 dimer experiment protease protein visualization by cactus on 2008-10-29 08:43:38 as along with 2 people and 1 group raik skoddet Nielsen group
	A phase diagram for jammed matter [My Copy] Nature, Vol. 453, No. 7195. (29 May 2008), pp. 629-632. by Chaoming Song, Ping Wang, Hernan A. Makse posted to clip2 granular-material packing physics by cactus on 2008-06-19 06:05:46 as along with 6 people dchen kdesmond soramame_0518 sen_cheng wmppaul jenda_z
	Kemp elimination catalysts by computational enzyme design [My Copy] Nature, Vol. 453, No. 7192. (8 May 2008), pp. 190-195. by Daniela Rothlisberger, Olga Khersonsky, Andrew M. Wollacott, et al.Lin Jiang, Jason Dechancie, Jamie Betker, Jasmine L. Gallaher, Eric A. Althoff, Alexandre Zanghellini, Orly Dym, Shira Albeck, Kendall N. Houk, Dan S. Tawfik, David Baker posted to clip2 design enzyme protein by cactus on 2008-05-08 12:06:27 as along with 11 people and 3 groups baiaixi whitead qbin1304 fralium Diego_Prada apaydin jwm msuarezdiez austin neils sobolevnrm Jiang Research Group Biocatalysis and Biotransformation baker-group
	Dynamic binding orientations direct activity of HIV reverse transcriptase [My Copy] Nature, Vol. 453, No. 7192. (May 2008), pp. 184-189. by Elio A. Abbondanzieri, Gregory Bokinsky, Jason W. Rausch, Jennifer X. Zhang, Stuart F. Le Grice, Xiaowei Zhuang posted to clip2 function protein by cactus on 2008-05-08 12:05:28 as along with 2 people and 1 group wsjames kieran101 Oxford Virology
	Modeling transient collapsed states of an unfolded protein to provide insights into early folding events [My Copy] Proceedings of the National Academy of Sciences, Vol. 105, No. 17. (29 April 2008), pp. 6278-6283. by Daniel J. Felitsky, Michael A. Lietzow, Jane H. Dyson, Peter E. Wright posted to clip2 experiment folding nmr protein spin by cactus on 2008-05-07 08:23:51 as along with 1 person yxue
	The thermal impulse response of Escherichia coli [My Copy] Proceedings of the National Academy of Sciences, Vol. 105, No. 14. (8 April 2008), pp. 5373-5377. by Eli Paster, William S. Ryu posted to adaptation cell clip2 ecoli temperature by cactus on 2008-05-02 11:20:31 as
	Evolvability and hierarchy in rewired bacterial gene networks. [My Copy] Nature, Vol. 452, No. 7189. (17 April 2008), pp. 840-845. by Mark Isalan, Caroline Lemerle, Konstantinos Michalodimitrakis, et al.Carsten Horn, Pedro Beltrao, Emanuele Raineri, Mireia Garriga-Canut, Luis Serrano posted to cell clip2 evolution gene_expression network stability by cactus on 2008-05-02 09:03:55 as along with 25 people and 4 groups yyfwuhan biomcgary megraw chica jimineep balabu kaarsinogen aalibes tmmurali dullhunk neils cmzmasek AbnerCYH josedavid biehl caseybrown Garamonfok austin hryk dbikard margaritis chad_davis michaelbarton aheilbut zwang GEB Centre de Recherches Interdisciplinaires SynBioSys BergmanLab
	Following translation by single ribosomes one codon at a time [My Copy] Nature (09 March 2008) by Jin-Der Wen, Laura Lancaster, Courtney Hodges, et al.Ana-Carolina Zeri, Shige H. Yoshimura, Harry F. Noller, Carlos Bustamante, Ignacio Tinoco posted to clip2 experiment motor ribosome rna by cactus on 2008-05-02 08:49:43 as along with 4 people jdwen dchughes jonathanjacobs melting
	Watching rocks grow [My Copy] Nat Phys, Vol. 4, No. 4. (April 2008), pp. 310-313. by Veysey, Nigel Goldenfeld posted to clip2 geometry pattern_formation by cactus on 2008-04-02 10:33:07 as
	Differential Regulation of Dynein and Kinesin Motor Proteins by Tau [My Copy] Science (17 January 2008), 1152993. by Ram Dixit, Jennifer L. Ross, Yale E. Goldman, Erika L. Holzbaur posted to clip2 dynein experiment kinesin motor regulation by cactus on 2008-02-22 10:28:39 as along with 3 people rdog2213 inbetweener davidlott
	Cooperative folding kinetics of BBL protein and peripheral subunit-binding domain homologues [My Copy] Proceedings of the National Academy of Sciences, Vol. 105, No. 7. (19 February 2008), pp. 2397-2402. by Wookyung Yu, Kwanghoon Chung, Mookyung Cheon, et al.Muyoung Heo, Kyou-Hoon Han, Sihyun Ham, Iksoo Chang posted to clip2 folding free-energy mc by cactus on 2008-02-22 09:49:00 as
	The X-ray crystal structure of RNA polymerase from Archaea [My Copy] Nature (30 January 2008) by Akira Hirata, Brianna J. Klein, Katsuhiko S. Murakami posted to clip2 motor xray-crystal-structure by cactus on 2008-02-22 08:26:51 as along with 2 people drrbhardwaj sulfolob
	Chaos in a long-term experiment with a plankton community [My Copy] Nature, Vol. 451, No. 7180. (14 February 2008), pp. 822-825. by Elisa Beninca, Jef Huisman, Reinhard Heerkloss, et al.Klaus D. Johnk, Pedro Branco, Egbert H. Van Nes, Marten Scheffer, Stephen P. Ellner posted to chaos clip2 experiment foodweb by cactus on 2008-02-22 08:19:02 as along with 5 people and 1 group Koh Pascalichouchou kinestetika yuhc vrich microbiology_nijmegen
	Structural identification of the pathway of long-range communication in an allosteric enzyme [My Copy] Proceedings of the National Academy of Sciences, Vol. 105, No. 6. (12 February 2008), pp. 1832-1837. by Prafull S. Gandhi, Zhiwei Chen, F. Scott Mathews, Enrico Di Cera posted to allostery clip2 protein xray-crystal-structure by cactus on 2008-02-13 10:34:58 as along with 3 people and 1 group boris_aguilar lna sobolevnrm baker-group
	Intrinsically disordered gamma-subunit of cGMP phosphodiesterase encodes functionally relevant transient secondary and tertiary structure [My Copy] Proceedings of the National Academy of Sciences, Vol. 105, No. 5. (5 February 2008), pp. 1505-1510. by Jikui Song, Lian-Wang Guo, Hakim Muradov, Nikolai O. Artemyev, Arnold E. Ruoho, John L. Markley posted to clip2 experiment intrinsic_disorder nmr by cactus on 2008-02-13 10:31:56 as
	Maps of random walks on complex networks reveal community structure [My Copy] Proceedings of the National Academy of Sciences, Vol. 105, No. 4. (29 January 2008), pp. 1118-1123. by Martin Rosvall, Carl T. Bergstrom posted to analysis clip2 network by cactus on 2008-02-13 09:02:16 as along with 22 people Borelli davidecellai jsaramak normaali daforerog apocapoc Kovanen vtraag cgaugain yzhang haewoon lynnefox misc jonesn lfriedl stringertheory cjeans hannu roys maralena Diego_Prada lmichan
	Cooperative binding of ATP and RNA induces a closed conformation in a DEAD box RNA helicase [My Copy] Proceedings of the National Academy of Sciences, Vol. 105, No. 2. (15 January 2008), pp. 548-553. by Bettina Theissen, Anne R. Karow, Jurgen Kohler, Airat Gubaev, Dagmar Klostermeier posted to allostery atp clip2 experiment fret by cactus on 2008-02-13 06:15:16 as along with 1 person aip
	Stepwise dynamics of epitaxially growing single amyloid fibrils [My Copy] Proceedings of the National Academy of Sciences, Vol. 105, No. 1. (8 January 2008), pp. 141-144. by Miklos S. Kellermayer, Arpad Karsai, Margit Benke, Katalin Soos, Botond Penke posted to amyloid clip2 experiment fiber growth by cactus on 2008-02-13 05:36:28 as
	The AAA+ superfamily -- a myriad of motions [My Copy] Current Opinion in Structural Biology In Catalysis and regulation / Proteins, Vol. 17, No. 6. (December 2007), pp. 641-652. by Paul A. Tucker, Laszlo Sallai posted to aaa clip2 protein review by cactus on 2008-02-12 11:09:24 as along with 1 person barry
	Enhanced reaction kinetics in biological cells [My Copy] Nat Phys, Vol. 4, No. 2. (February 2008), pp. 134-137. by C. Loverdo, O. Benichou, M. Moreau, R. Voituriez posted to cell clip2 diffusion model theory transport by cactus on 2008-02-12 10:34:57 as
	Alignment Uncertainty and Genomic Analysis [My Copy] Science, Vol. 319, No. 5862. (25 January 2008), pp. 473-476. by Karen M. Wong, Marc A. Suchard, John P. Huelsenbeck posted to alignment analysis clip2 error estimate method by cactus on 2008-02-12 09:59:49 as along with 32 people and 2 groups operon walshtp darian ptrobajo friendpine skembel druvus treangen bpb aprasad dayjm pradiptaray dpollard tny djkt cjeans zwang lisa1 biomcgary lilou dandaman gjuggler renatomilani mclarenv youdon bpcusack guhjy jdelcampo adacier gracio timflutre jfr EisenLab microbiology_nijmegen
	The Frequency Dependence of Osmo-Adaptation in Saccharomyces cerevisiae [My Copy] Science, Vol. 319, No. 5862. (25 January 2008), pp. 482-484. by Jerome T. Mettetal, Dale Muzzey, Carlos Gomez-Uribe, Alexander van Oudenaarden posted to adaptation clip2 network by cactus on 2008-02-12 09:41:39 as along with 8 people abhishek_tiwari mmcclean cjryan bayesian margaritis cjeans biomcgary brianb
	Programming biomolecular self-assembly pathways. [My Copy] Nature, Vol. 451, No. 7176. (17 January 2008), pp. 318-322. by Peng Yin, Harry M. Choi, Colby R. Calvert, Niles A. Pierce posted to clip2 model by cactus on 2008-02-12 07:19:13 as along with 4 people ellarond tmmurali cjeans austin
	Structural Basis for Signal-Sequence Recognition by the Translocase Motor SecA as Determined by NMR [My Copy] Cell, Vol. 131, No. 4. (16 November 2007), pp. 756-769. by Ioannis Gelis, Alexandre M. Bonvin, Dimitra Keramisanou, et al.Marina Koukaki, Giorgos Gouridis, Spyridoula Karamanou, Anastassios Economou, Charalampos G. Kalodimos posted to clip2 seca by cactus on 2008-01-15 08:45:48 as along with 1 person rph
	Structure and dynamics of a molten globular enzyme. [My Copy] Nat Struct Mol Biol (11 November 2007) by Konstantin Pervushin, Katherina Vamvaca, Beat Vögeli, Donald Hilvert posted to binding clip2 enzyme experiment intrinsic_disorder ligand molten_globule nmr by cactus on 2008-01-15 07:17:14 as along with 2 people and 1 group cjeans sobolevnrm baker-group
	Stability of the proteasome can be regulated allosterically through engagement of its proteolytic active sites [My Copy] Nature Structural & Molecular Biology, Vol. 14, No. 12. (18 November 2007), pp. 1180-1188. by Maurits F. Kleijnen, Jeroen Roelofs, Soyeon Park, et al.Nathaniel A. Hathaway, Michael Glickman, Randall W. King, Daniel Finley posted to allostery clip2 experiment protein by cactus on 2008-01-15 06:19:50 as
	Designed Protein-Protein Association [My Copy] Science, Vol. 319, No. 5860. (11 January 2008), pp. 206-209. by Dirk Grueninger, Nora Treiber, Mathias O. Ziegler, Jochen W. Koetter, Monika-Sarah Schulze, Georg E. Schulz posted to clip2 design mutation oligomer protein by cactus on 2008-01-15 06:10:38 as along with 6 people and 1 group timg cjeans zwang biomcgary sobolevnrm higueruelo baker-group
	Real-time observation of bacteriophage T4 gp41 helicase reveals an unwinding mechanism [My Copy] Proceedings of the National Academy of Sciences, Vol. 104, No. 50. (11 December 2007), pp. 19790-19795. by Timothee Lionnet, Michelle M. Spiering, Stephen J. Benkovic, David Bensimon, Vincent Croquette posted to clip2 experiment helicase motor by cactus on 2008-01-11 10:42:59 as
	A mathematical tool for exploring the dynamics of biological networks [My Copy] Proceedings of the National Academy of Sciences (21 November 2007), 0709955104. by Paolo E. Barbano, Marina Spivak, Marc Flajolet, Angus C. Nairn, Paul Greengard, Leslie Greengard posted to analysis clip2 network by cactus on 2008-01-11 10:36:50 as along with 11 people and 1 group Scis0000002 agomez tmmurali cjeans zwang sobolevnrm forgoston lenov sdbneuro mdramirez phoenixzxl baker-group
	Construction of effective free energy landscape from single-molecule time series [My Copy] Proceedings of the National Academy of Sciences, Vol. 104, No. 49. (4 December 2007), pp. 19297-19302. by Akinori Baba, Tamiki Komatsuzaki posted to analysis clip2 time_series by cactus on 2008-01-11 10:34:40 as along with 6 people and 1 group hmk zwang sobolevnrm Diego_Prada arnaudriegert hsekiguc baker-group
	Visualizing spatially correlated dynamics that directs RNA conformational transitions [My Copy] Nature, Vol. 450, No. 7173., pp. 1263-1267. by Qi Zhang, Andrew C. Stelzer, Charles K. Fisher, Hashim M. Al-Hashimi posted to analysis clip2 nmr rna structure visualization by cactus on 2008-01-11 09:59:07 as along with 7 people and 3 groups sobolevnrm niallhaslam joseph_x_zhou kintoki kluck nigham simone baker-group HIV_DR Soft Matter
	Allometric degree distributions facilitate food-web stability [My Copy] Nature, Vol. 450, No. 7173., pp. 1226-1229. by Sonja B. Otto, Björn C. Rall, Ulrich Brose posted to clip2 ecology by cactus on 2008-01-11 07:41:54 as along with 1 person Koh
	Structural basis for gate-DNA recognition and bending by type IIA topoisomerases [My Copy] Nature, Vol. 450, No. 7173., pp. 1201-1205. by Ken C. Dong, James M. Berger posted to clip2 protein xray-crystal-structure by cactus on 2008-01-11 07:38:12 as along with 1 person and 1 group sobolevnrm baker-group
	Coevolution with viruses drives the evolution of bacterial mutation rates [My Copy] Nature, Vol. 450, No. 7172. (02 December 2007), pp. 1079-1081. by Csaba Pal, Maria D. Macia, Antonio Oliver, Ira Schachar, Angus Buckling posted to clip2 evolution parasite by cactus on 2008-01-11 07:32:13 as along with 4 people niallhaslam yuhc dayjm cjeans
	Crystal structure of the plasma membrane proton pump [My Copy] Nature, Vol. 450, No. 7172. (13 December 2007), pp. 1111-1114. by Bjorn P. Pedersen, Morten J. Buch-Pedersen, Preben, Michael G. Palmgren, Poul Nissen posted to clip2 xray-diffraction by cactus on 2008-01-11 07:17:59 as along with 1 person dayjm
	Crystal structure of the sodium–potassium pump [My Copy] Nature, Vol. 450, No. 7172., pp. 1043-1049. by Preben J. Morth, Bjørn P. Pedersen, Mads S. Toustrup-Jensen, et al.Thomas L. M. Sørensen, Janne Petersen, Jens P. Andersen, Bente Vilsen, Poul Nissen posted to clip2 xray-crystal-structure by cactus on 2008-01-11 07:17:21 as
	Conformational dynamics of the KcsA potassium channel governs gating properties [My Copy] Nat Struct Mol Biol, Vol. 14, No. 11. (November 2007), pp. 1089-1095. by Kent A. Baker, Christos Tzitzilonis, Witek Kwiatkowski, Senyon Choe, Roland Riek posted to channel clip2 nmr by cactus on 2007-11-22 10:50:24 as along with 1 person dimka
	Molecular driving forces determining potassium channel slow inactivation [My Copy] Nature Structural & Molecular Biology, Vol. 14, No. 11. (07 October 2007), pp. 1062-1069. by Julio F. Cordero-Morales, Vishwanath Jogini, Anthony Lewis, et al.Valeria Vásquez, Marien D. Cortes, Benoît Roux, Eduardo Perozo posted to channel clip2 inactivation by cactus on 2007-11-22 10:49:41 as
	From the Cover: Hierarchies, multiple energy barriers, and robustness govern the fracture mechanics of alpha-helical and beta-sheet protein domains [My Copy] Proceedings of the National Academy of Sciences, Vol. 104, No. 42. (16 October 2007), pp. 16410-16415. by Theodor Ackbarow, Xuefeng Chen, Sinan Keten, Markus J. Buehler posted to clip2 force fullatom md stability by cactus on 2007-11-22 08:03:08 as along with 1 person choonpeng
	A functional single-molecule binding assay via force spectroscopy [My Copy] Proceedings of the National Academy of Sciences, Vol. 104, No. 40. (2 October 2007), pp. 15677-15681. by Yi Cao, M. M. Balamurali, Deepak Sharma, Hongbin Li posted to afm binding clip2 design experiment ligand protein by cactus on 2007-11-20 11:19:21 as

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experiment	19
protein	14
xray-crystal-structure	8
network	7
analysis	6
motor	5
nmr	5
allostery	4
cell	4
channel	4
design	3
ecology	3
evolution	3
folding	3
rna	3
seca	3
structure	3
visualization	3
adaptation	2
amyloid	2
binding	2
dynein	2
enzyme	2
fluorescent	2
gene_expression	2
intrinsic_disorder	2
ligand	2
md	2
model	2
physics	2
stability	2
theory	2
aaa	1
afm	1
aggregation	1
alignment	1
atp	1
chaos	1
chaperone	1
diffusion	1
dimer	1
dimerization	1
dna-polymerase	1
ecoli	1
entropy	1
error	1
estimate	1
fiber	1
foodweb	1
force	1
free-energy	1
fret	1
fullatom	1
function	1
geometry	1
granular-material	1
growth	1
helicase	1
inactivation	1
inhibitor	1
kinesin	1
language	1
mc	1
membrane	1
method	1
molten_globule	1
mutation	1
news-and-view	1
oligomer	1
packing	1
parasite	1
pattern_formation	1
prion	1
protease	1
reaction	1
regulation	1
review	1
ribosome	1
rna-polymerase	1
simulation	1
single_molecule	1
spin	1
temperature	1
time_series	1
transport	1
xray-diffraction	1

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