Tag divergence [180 articles] Export

Recent papers classified by the tag divergence.

	Patterns and rates of intron divergence between humans and chimpanzees. [My Copy] Genome biology, Vol. 8, No. 2. (19 February 2007), R21. by Elodie Gazave, Tomàs Marqués-Bonet, Olga Fernando, Brian Charlesworth, Arcadi Navarro posted to intron humans divergence chimps by gregoryross on 2009-11-05 12:46:06 as along with 6 people and 2 groups robfsouza inesdesantiago nickluscombe lilou cisevol hdopazo EBI-regulation cis-regulatory-evolution
	Elements of Information Theory [My Copy] (12 August 1991) by Thomas M. Cover, Joy A. Thomas posted to information-theory divergence by memming on 2009-11-03 19:54:55 as along with 19 people brian robotact samedina misovalko ppeeling stanley yaroslavvb leidner bayesian BarrosH archroad infogrind dpf kvorg pvfloripa zchen ecome Hans45 abellogin
	Discrimination with Spike Times and ISI Distributions [My Copy] Neural Computation, Vol. 20, No. 6. (14 June 2008), pp. 1411-1426. by Kukjin Kang, Shun-ichi Amari posted to renewal-process neural-code divergence chernoff-distance by memming on 2009-11-03 19:28:58 as along with 2 people bayesian sen_cheng
	Information-Theoretic Analysis of Neural Coding [My Copy] Journal of Computational Neuroscience, Vol. 10, No. 1. (1 January 2001), pp. 47-69. by Don H. Johnson, Charlotte M. Gruner, Keith Baggerly, Chandran Seshagiri posted to neural-code information-theory divergence by memming on 2009-11-03 19:25:36 as along with 1 person bayesian
	Functional compensation by duplicated genes in mouse [My Copy] Trends in Genetics, Vol. 25, No. 10. (25 October 2009), pp. 441-442. by Han Liang, Wen-Hsiung Li posted to sysbio rodents duplication divergence by djkt on 2009-10-21 18:52:20 as
	Trends and uncertainties in Siberian indicators of 20th century warming [My Copy] Global Change Biology, Vol. 9999, No. 9999. (2009) by R. Jan Espe, K. David Fran, N. Ulf Büntge, E. Anne Versteg, Rashit M. Hantemirov, Alexander V. Kirdyanov posted to uncertainty trend tree-ring temperature proxy paleoclimate divergence climate boreal bias by nurban on 2009-10-06 15:54:12 as
	The Neandertal genome and ancient DNA authenticity [My Copy] The EMBO Journal, Vol. 28, No. 17. (06 August 2009), pp. 2494-2502. by Richard E. Green, Adrian W. Briggs, Johannes Krause, et al.Kay Prufer, Hernan A. Burbano, Michael Siebauer, Michael Lachmann, Svante Paabo posted to primates phylogenomics nuclear mitochondrial methods humans hominidae genome genetics fossils divergence data-mining anthropology by rvosa to the group FAB-lab on 2009-10-06 09:58:04 as
	Divergence of Transcription Factor Binding Sites Across Related Yeast Species [My Copy] Science, Vol. 317, No. 5839. (10 August 2007), pp. 815-819. by Anthony R. Borneman, Tara A. Gianoulis, Zhengdong D. Zhang, et al.Haiyuan Yu, Joel Rozowsky, Michael R. Seringhaus, Lu Y. Wang, Mark Gerstein, Michael Snyder posted to yeast tfbs motif evolution duplication divergence by pradiptaray on 2009-09-30 21:53:18 as along with 22 people and 2 groups gdb fenghezi dbensasson caseybrown bryankr aalibes chad_davis dpollard djkt mikaelhuss lusk cjeans sujaikumar zwang GustavoLacerda Jporci maximilianh cisevol njcitulike emptyhb nklee anka EisenLab cis-regulatory-evolution
	Genome divergence in two Prochlorococcus ecotypes reflects oceanic niche differentiation. [My Copy] Nature, Vol. 424, No. 6952. (28 August 2003), pp. 1042-1047. by G. Rocap, F. W. Larimer, J. Lamerdin, et al.S. Malfatti, P. Chain, N. A. Ahlgren, A. Arellano, M. Coleman, L. Hauser, W. R. Hess, Z. I. Johnson, M. Land, D. Lindell, A. F. Post, W. Regala, M. Shah, S. L. Shaw, C. Steglich, M. B. Sullivan, C. S. Ting, A. Tolonen, E. A. Webb, E. R. Zinser, S. W. Chisholm posted to prochlorococcus ecotypes divergence by hwright on 2009-09-20 01:59:30 as along with 3 people and 1 group michaelbarton bluto beatrizfernandez Microbial-Ecology
	The relation between the divergence of sequence and structure in proteins. [My Copy] The EMBO journal, Vol. 5, No. 4. (April 1986), pp. 823-826. by C. Chothia, A. M. Lesk posted to sequence-analysis sequence proteins homologous divergence by bertelsen on 2009-09-06 00:23:49 as along with 12 people and 6 groups ucbcjbm semin sgoetz cen4ik ana pansapiens jwm Einat marcius xdeupi ffranca insectopalo structural_bioinformatics Radiation_Damage Stressosome Bioinformatics BioinfoCIPF SGU-CIPF
	Game theory, maximum entropy, minimum discrepancy and robust Bayesian decision theory [My Copy] The Annals of Statistics, Vol. 32, No. 4. (August 2004), pp. 1367-1433. by A. Philip Dawid, Peter D. Gr�nwald posted to game_theory exponential_family divergence decision_theory bregman bayesian by mdreid to the group Statistical Machine Learning on 2009-09-02 00:38:16 as
	Training restricted Boltzmann machines using approximations to the likelihood gradient [My Copy] In ICML '08: Proceedings of the 25th international conference on Machine learning (2008), pp. 1064-1071. by Tijmen Tieleman posted to random markov learning fields divergence contrastive by varung on 2009-08-28 23:57:01 as along with 1 person pcarbo
	Gene expression divergence in yeast is coupled to evolution of DNA-encoded nucleosome organization [My Copy] Nat Genet, Vol. 41, No. 4. (01 March 2009), pp. 438-445. by Yair Field, Yvonne Fondufe-Mittendorf, Irene K. Moore, et al.Piotr Mieczkowski, Noam Kaplan, Yaniv Lubling, Jason D. Lieb, Jonathan Widom, Eran Segal posted to transcription regulation gene expression evolution divergence chromosome chromatin by robfsouza on 2009-08-13 02:53:30 as along with 10 people and 1 group aprickett daveGerrard TRHvidsten siebert athma clearbluespring lp2 fenghezi djkt provero BergmanLab
	Spike Train Probability Models for Stimulus-Driven Leaky Integrate-and-Fire Neurons. [My Copy] Neural computation, Vol. 20, No. 7. (July 2008), pp. 1776-1795. by Shinsuke Koyama, Robert E. Kass posted to divergence point-process-model renewal-process by memming on 2009-08-10 15:38:34 as along with 3 people bayesian flips sen_cheng
	Coevolution of Interacting Fertilization Proteins [My Copy] PLoS Genet, Vol. 5, No. 7. (24 July 2009), e1000570. by Nathaniel L. Clark, Joe Gasper, Masashi Sekino, Stevan A. Springer, Charles F. Aquadro, Willie J. Swanson posted to correlation divergence evolution popgen proteins selection sex speciation by djkt on 2009-07-27 18:50:48 as along with 3 people and 2 groups dchughes stevanspringer theodorejmorgan Orengo Group Journal Picks Morgan Lab-KSU
	Adaptive peaks in a flat-fish: Adaptive divergence overcoming gene flow [My Copy] Heredity, Vol. 99, No. 6. (12 September 2007), pp. 565-566. by L. Zane posted to adaptive divergence fish by jlin on 2009-07-21 03:17:12 as
	Adaptive Online Gradient Descent [My Copy] In NIPS (2007) by Peter L. Bartlett, Elad Hazan, Alexander Rakhlin edited by John C. Platt, Daphne Koller, Yoram Singer, et al.Sam T. Roweis, John C. Platt, Daphne Koller, Yoram Singer, Sam T. Roweis posted to bregman divergence online theory by mdreid to the group Statistical Machine Learning on 2009-07-17 04:12:32 as
	Analysis of Rare Genomic Changes Does Not Support the Unikont-Bikont Phylogeny and Suggests Cyanobacterial Symbiosis as the Point of Primary Radiation of Eukaryotes [My Copy] Genome Biol Evol, Vol. 2009, No. 0. (22 June 2009), pp. 99-113. by Igor B. Rogozin, Malay K. Basu, Miklos Csuros, Eugene V. Koonin posted to deep divergence eukaryote phylogeny by sriesenfeld on 2009-07-16 20:00:36 as
	How much of the variation in adaptive divergence can be explained by gene flow? An evaluation using lake-stream stickleback pairs [My Copy] Evolution, Vol. 58, No. 10. (2004), pp. 2319-2331. by Andrew P. Hendry, Eric B. Taylor posted to adaptive divergence flow gene stickleback by jlin on 2009-07-15 18:40:14 as
	Does gene flow constrain adaptive divergence or vice versa? A test using ecomorphology and sexual isolation in Timema cristinae walking-sticks [My Copy] Evolution, Vol. 58, No. 1. (2004), 102. by P. Nosil, B. J. Crespi posted to adaptive divergence flow gene walking-stick by jlin on 2009-07-15 18:01:27 as
	Adaptive Changes in Life History and Survival following a New Guppy Introduction. [My Copy] The American Naturalist, Vol. 174, No. 1. (1 July 2009), pp. 34-45. by Swanne p Gordon, David n Reznick, Michael t Kinnison, et al.Michael j Bryant, Dylan j Weese, Katja Räsänen, Nathan p Millar, Andrew p Hendry posted to adaptive contemporary-evolution divergence fitness life-history mark-recapture poecilia-reticulata by gfox on 2009-07-10 19:54:22 as along with 1 person iBartomeus
	Distinguishing adaptive from nonadaptive genetic differentiation: comparison of QST and FST at two spatial scales [My Copy] Heredity, Vol. 95, No. 6. (28 September 2005), pp. 466-475. by S. Volis, B. Yakubov, I. Shulgina, D. Ward, S. Mendlinger posted to adaptive divergence fst qst by jlin on 2009-07-02 03:42:57 as
	Adaptive divergence and the balance between selection and gene flow: lake and stream stickleback in the Misty system [My Copy] Evolution, Vol. 56, No. 6. (2002), pp. 1199-1216. by Andrew P. Hendry, Eric B. Taylor, J. Donald Mcphail posted to aculeatus adaptive divergence gasterosteus stickleback by jlin on 2009-07-02 02:23:34 as
	The multifarious effects of dispersal and gene flow on contemporary adaptation [My Copy] Functional Ecology, Vol. 21, No. 3. (June 2007), pp. 434-443. by Dany Garant, Samantha E. Forde, Andrew P. Hendry posted to adaptive divergence flow gene by jlin on 2009-07-02 02:09:56 as
	Spatial and temporal scales of adaptive divergence in marine fishes and the implications for conservation [My Copy] Journal of Fish Biology, Vol. 69, No. sc. (December 2006), pp. 21-47. by D. O. Conover, L. M. Clarke, S. B. Munch, G. N. Wagner posted to adaptive divergence marine by jlin on 2009-07-02 02:04:23 as
	The genomic and epidemiological dynamics of human influenza A virus [My Copy] Nature (16 April 2008) by Andrew Rambaut, Oliver G. Pybus, Martha I. Nelson, Cecile Viboud, Jeffery K. Taubenberger, Edward C. Holmes posted to dating divergence influenza by katholt on 2009-06-26 13:00:33 as along with 4 people carlk friendpine smbe2008 emptyhb
	Molecular evolution and circulation patterns of human respiratory syncytial virus subgroup a: positively selected sites in the attachment g glycoprotein. [My Copy] Journal of virology, Vol. 78, No. 9. (May 2004), pp. 4675-4683. by K. T. Zlateva, P. Lemey, A. M. Vandamme, M. Van Ranst posted to dating divergence hrsv virus by katholt on 2009-06-26 12:57:52 as
	The glutamine synthetases of rhizobia: phylogenetics and evolutionary implications. [My Copy] Molecular biology and evolution, Vol. 17, No. 2. (February 2000), pp. 309-319. by S. L. Turner, J. P. Young posted to bacteria coli divergence glutamine protein salmonella by katholt on 2009-06-18 15:10:36 as
	A genomic timescale of prokaryote evolution: insights into the origin of methanogenesis, phototrophy, and the colonization of land. [My Copy] BMC evolutionary biology, Vol. 4 (9 November 2004) by F. U. Battistuzzi, A. Feijao, S. B. Hedges posted to bacteria divergence phylogeny time by katholt on 2009-06-17 14:50:12 as
	Genetic evidence for complex speciation of humans and chimpanzees. [My Copy] Nature, Vol. 441, No. 7097. (29 June 2006), pp. 1103-1108. by N. Patterson, D. J. Richter, S. Gnerre, E. S. Lander, D. Reich posted to chimp divergence genome human by katholt on 2009-06-17 11:31:34 as along with 11 people and 4 groups aprasad klouie kentsis great_apes balicea Archaeogenetics cmm larios theseuskf djkt lh3 Glimcher_Lab biodiversity_conservation FAB-lab Durbin group
	Heterotachy, an important process of protein evolution. [My Copy] Molecular biology and evolution, Vol. 19, No. 1. (January 2002), pp. 1-7. by P. Lopez, D. Casane, H. Philippe posted to divergence evolution heterotachy by ramiro2k on 2009-06-15 18:37:08 as along with 1 person and 1 group michaelbarton BergmanLab
	The origin of new genes: glimpses from the young and old. [My Copy] Nat Rev Genet, Vol. 4, No. 11. (November 2003), pp. 865-875. by M. Long, E. Betrán, K. Thornton, W. Wang posted to divergence evolution by ramiro2k on 2009-06-15 18:15:26 as along with 5 people wangbo jbsaltz ushishir timflutre shoshin
	Evolution in bacteria: evidence for a universal substitution rate in cellular genomes. [My Copy] J Mol Evol, Vol. 26, No. 1-2. (1987), pp. 74-86. by H. Ochman, A. C. Wilson posted to dating divergence mutation by katholt on 2009-06-06 16:18:32 as along with 3 people treangen AaronDarling karfunkel
	Statistical inference based on divergence measures [My Copy] (2006) by Pardo posted to divergence hypotheis-test information-theory statistics by memming on 2009-06-02 13:59:16 as
	Saccharomyces cerevisiae: population divergence and resistance to oxidative stress in clinical, domesticated and wild isolates. [My Copy] PLoS ONE, Vol. 4, No. 4. (2009) by S. Diezmann, F. S. Dietrich posted to divergence saccharomyces stress_response by stajich to the group Mycology on 2009-05-12 06:13:43 as along with 1 person dbensasson
	On Divergences and Informations in Statistics and Information Theory [My Copy] Information Theory, IEEE Transactions on In Information Theory, IEEE Transactions on, Vol. 52, No. 10. (2006), pp. 4394-4412. by F. Liese, I. Vajda posted to divergence f-divergence information-theory measure probability-density-function statistics by memming on 2009-05-07 14:26:23 as along with 1 person and 1 group mdreid Statistical Machine Learning
	The impact of genomic neighborhood on the evolution of human and chimpanzee transcriptome [My Copy] Genome Research (1 January 2009) by Subhajyoti De, Sarah A. Teichmann, Madan M. Babu posted to divergence evolution expression sv by djkt on 2009-05-02 02:36:39 as along with 11 people and 1 group natstreet clearbluespring maximilianh alweber jbhiatt xianjun cisevol inesdesantiago provero JustinCrocker medic0747 cis-regulatory-evolution
	The universal distribution of evolutionary rates of genes and distinct characteristics of eukaryotic genes of different apparent ages [My Copy] Proceedings of the National Academy of Sciences (7 April 2009) by Yuri I. Wolf, Pavel S. Novichkov, Georgy P. Karev, Eugene V. Koonin, David J. Lipman posted to adaptation amino-acid divergence estimation genetics genome methods models protein rates selection sequence-evolution statistics by rvosa to the group FAB-lab on 2009-04-24 09:19:23 as along with 4 people RamuAnandakrishnan deanmalmgren jjray gjuggler
	Quantification of Adaptive Evolution of Genes Expressed in Avian Brain and the Population Size Effect on the Efficacy of Selection [My Copy] Mol Biol Evol, Vol. 26, No. 5. (1 May 2009), pp. 1073-1079. by Erik Axelsson, Hans Ellegren posted to amino-acid birds divergence encephalization evolution humans population-genetics protein selection by rvosa to the group FAB-lab on 2009-04-24 09:10:33 as along with 1 person gjuggler
	Divergence Times in Caenorhabditis and Drosophila Inferred from Direct Estimates of the Neutral Mutation Rate [My Copy] Mol Biol Evol, Vol. 25, No. 4. (1 April 2008), pp. 778-786. by Asher D. Cutter posted to caenorhabditis divergence by sujaikumar on 2009-04-20 15:39:34 as along with 3 people and 1 group hrogers thegoose2 tharris C. elegans / WormBase
	Divergence of Quaternary Structures Among Bacterial Flagellar Filaments [My Copy] Science, Vol. 320, No. 5874. (18 April 2008), pp. 382-385. by Vitold E. Galkin, Xiong Yu, Jakub Bielnicki, et al.John Heuser, Cheryl P. Ewing, Patricia Guerry, Edward H. Egelman posted to divergence structure by kgutwin on 2009-03-22 04:07:06 as along with 1 person jbd4f
	ConSurf 2005: the projection of evolutionary conservation scores of residues on protein structures. [My Copy] Nucleic acids research, Vol. 33, No. Web Server issue. (1 July 2005) by Meytal Landau, Itay Mayrose, Yossi Rosenberg, et al.Fabian Glaser, Eric Martz, Tal Pupko, Nir Ben-Tal posted to divergence functional sites functionalsites by ramiro2k on 2009-03-21 19:32:10 as along with 8 people and 1 group pablocarb tomjad klexa shacko oteri chrn sriram_s bicko Structural Biology Group TorVergata
	An evolutionary trace method defines binding surfaces common to protein families. [My Copy] J Mol Biol, Vol. 257, No. 2. (29 March 1996), pp. 342-358. by O. Lichtarge, H. R. Bourne, F. E. Cohen posted to divergence functional functionalsites by ramiro2k on 2009-03-21 19:29:16 as along with 4 people and 1 group lna nickolay sriram_s cat_worth structural_bioinformatics
	Evolutionary Analysis for Functional Divergence of the Toll-Like Receptor Gene Family and Altered Functional Constraints [My Copy] Journal of Molecular Evolution, Vol. 65, No. 2. (August 2007), pp. 119-123. by Zhou, Huaijun, Gu, et al. Jianying, Lamont, Susan, Gu, Xun posted to divergence functional gu functionalsites by ramiro2k on 2009-03-18 14:43:22 as
	Effect of site-specific heterogeneous evolution on phylogenetic reconstruction: a simple evaluation. [My Copy] Gene, Vol. 441, No. 1-2. (15 July 2009), pp. 156-162. by Qiqun Cheng, Zhixi Su, Yang Zhong, Xun Gu posted to divergence functional phylogenetics functionalsites by ramiro2k on 2009-03-18 14:26:29 as
	Clustering with Bregman Divergences [My Copy] J. Mach. Learn. Res., Vol. 6 (2005), pp. 1705-1749. by Arindam Banerjee, Srujana Merugu, Inderjit S. Dhillon, Joydeep Ghosh posted to bregman clustering divergence by vlachmore on 2009-03-16 15:06:24 as
	Complete Conjugacy Invariants of Nonlinearizable Holomorphic Dynamics [My Copy] (13 Mar 2009) by Kingshook Biswas posted to divergence dynamical_systems normal_forms singularity univariate_functions by yakovenko on 2009-03-16 14:58:50 as
	A divergence critic [My Copy] Automated Deduction — CADE-12 (1994), pp. 14-28. by Toby Walsh posted to divergence lemma-generation rippling by radico on 2009-03-14 11:11:18 as
	Age-Dependent Evolution of the Yeast Protein Interaction Network Suggests a Limited Role of Gene Duplication and Divergence [My Copy] PLoS Comput Biol, Vol. 4, No. 11. (28 November 2008), e1000232. by Wan K. Kim, Edward M. Marcotte posted to biological_networks divergence evolution gene_duplication yeast by wangbo on 2009-03-05 16:20:37 as along with 7 people dakelley biomcgary cabbagesofdoom chad_davis grahamc bpcusack tmmurali
	Information Theoretic Methods in Probability and Statistics [My Copy] by Csiszar I. Budapest posted to divergence information probability statistics theory by mdreid to the group Statistical Machine Learning on 2009-02-24 08:50:29 as

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evolution	61
clock-like	24
rates	20
expression	17
phylogeny	17
primates	17
dna	15
humans	15
substitution-models	15
mammals	14
gene	13
reconstruction	13
adaptive	12
animals	12
genome	12
selection	12
comparative	11
functional	11
hominidae	11
sequence-evolution	10
yeast	10
adaptation	9
bregman	9
genetics	9
likelihood	9
protein	9
completion	8
duplication	8
theory	8
acceleration	7
amino-acid	7
functionalsites	7
laser	7
proteins	7
bayesian	6
data-mining	6
diversification	6
exponential_family	6
fossils	6
information-theory	6
phylogenomics	6
sequence	6
statistics	6
chimpanzee	5
f-divergence	5
flow	5
inference	5
information	5
mitochondrial	5
models	5
mt	5
normal_forms	5
ratio-test	5
anthropology	4
bacteria	4
clustering	4
convexity	4
dispersal	4
distributions	4
encephalization	4
estimation	4
genetic	4
gu	4
homo	4
human	4
methods	4
nuclear	4
probability	4
speciation	4
alignment	3
allelic	3
autosomal	3
beam	3
dating	3
electron	3
evolutionary	3
fish	3
information_geometry	3
life-history	3
molecular	3
molevoltestis	3
proton	3
sites	3
structure	3
supertree	3
target	3
time	3
transcription	3
y	3
zhangjianzhi	3
autopolyploid	2
bubble	2
classification	2
correlation	2
formal_theory	2
intron	2
mine	2
particle-in-cell	2
plasticity	2
pulse	2

Tag divergence [180 articles] Export

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