Tag dragan [20 articles] Export

Recent papers classified by the tag dragan.

	Reconstructing signaling pathways from RNAi data using probabilistic Boolean threshold networks. [My Copy] Bioinformatics (Oxford, England), Vol. 25, No. 17. (1 September 2009), pp. 2229-2235. by Lars Kaderali, Eva Dazert, Ulf Zeuge, Michael Frese, Ralf Bartenschlager posted to signaling rnai reconstruction dragan boolean by ptrobajo on 2009-11-02 10:41:21 as along with 1 person fastjoe23
	Systematic discovery of functional modules and context-specific functional annotation of human genome. [My Copy] Bioinformatics (Oxford, England), Vol. 23, No. 13. (1 July 2007), pp. i222-229. by Yu Huang, Haifeng Li, Haiyan Hu, et al.Xifeng Yan, Michael S. Waterman, Haiyan Huang, Xianghong Jasmine J. Zhou posted to subgraph network module itemset frequent dragan coexpression by ptrobajo on 2009-09-17 15:42:09 as along with 7 people meanerelk Borelli carlk saket jeremymiller cswinburne cabbagezs
	Comparative analysis of module-based versus direct methods for reverse-engineering transcriptional regulatory networks [My Copy] BMC Systems Biology, Vol. 3, No. 1. (2009), 49. by Tom Michoel, Riet De Smet, Anagha Joshi, Yves Van de Peer, Kathleen Marchal posted to regulatory network module dragan direct comparative benchmark by ptrobajo on 2009-09-12 21:24:32 as along with 3 people icecrown lptolik TRHvidsten
	GeNGe: systematic generation of gene regulatory networks [My Copy] Bioinformatics (Oxford, England) In Bioinformatics, Vol. 25, No. 9. (1 May 2009), pp. 1205-1207. by Hendrik Hache, Christoph Wierling, Hans Lehrach, Ralf Herwig posted to regulatory network inference dragan benchmark by ptrobajo on 2009-09-12 21:08:02 as along with 8 people bsamal ekotelnikova sotacam reyez tonamswish TRHvidsten rdiaz guhjy
	Comparing association network algorithms for reverse engineering of large-scale gene regulatory networks: synthetic versus real data [My Copy] Bioinformatics (Oxford, England) In Bioinformatics, Vol. 23, No. 13. (1 July 2007), pp. 1640-1647. by Nicola Soranzo, Ginestra Bianconi, Claudio Altafini posted to perturbation network knockout inference dragan by ptrobajo on 2009-09-03 09:52:49 as along with 6 people meanerelk fastjoe23 statnet heliopais roys tmmurali
	Predicting gene targets of perturbations via network-based filtering of mRNA expression compendia [My Copy] Bioinformatics, Vol. 24, No. 21. (1 November 2008), pp. 2482-2490. by Elissa J. Cosgrove, Yingchun Zhou, Timothy S. Gardner, Eric D. Kolaczyk posted to compendium dragan emiel knockout lasso perturbation by ptrobajo on 2008-10-26 20:51:39 as along with 2 people guhjy jfr
	Exploring the Operational Characteristics of Inference Algorithms for Transcriptional Networks by Means of Synthetic Data. [My Copy] Artif Life, Vol. 14, No. 1. (2008), pp. 49-63. by Koenraad Van Leemput, Tim Van den Bulcke, Thomas Dhollander, Bart De Moor, Kathleen Marchal, Piet van Remortel posted to dragan inference network roc synthetic syntren by ptrobajo on 2008-10-16 21:45:31 as along with 2 people tvdbulck frohike
	How to infer gene networks from expression profiles. [My Copy] Molecular systems biology, Vol. 3 (13 February 2007) by Mukesh Bansal, Vincenzo Belcastro, Alberto Ambesi-Impiombato, Diego di Bernardo posted to dragan expression gene network regulatory review by ptrobajo on 2008-10-16 21:43:18 as along with 39 people and 3 groups frohike Jporci beete tonamswish zufar nicholasflann icq242500260 guhjy Zephyrus antonkratz phoenixzxl bertelsen isimpson daforerog poirel agonzale roys Neeperando APRegier rdiaz klo Borelli ggallone druvus cswinburne jfr eckart_bindewald wnpx nickluscombe kengg mikaelhuss jrbanga BIBLIOma RockHI lp2 natstreet heliopais mariakmejia tmmurali Jarman Lab EBI-regulation Plantandetc
	Genetic reconstruction of a functional transcriptional regulatory network. [My Copy] Nat Genet (8 April 2007) by Zhanzhi Hu, Patrick J J. Killion, Vishwanath R R. Iyer posted to dragan factor knockout network regulatory transcription transcriptional yeast by ptrobajo on 2008-10-16 21:40:08 as along with 15 people and 6 groups sergiun TheresaNiederberger akraemer behindtherabbit dpollard xico nickluscombe zwang lizabeth dejori xingxu naegele czeller mapplab siebert Bioinformatics EisenLab WetBiology EBI-regulation ic4 generif_paper
	ARACNE: an algorithm for the reconstruction of gene regulatory networks in a mammalian cellular context. [My Copy] BMC Bioinformatics, Vol. 7 Suppl 1 (2006) by A. A. Margolin, I. Nemenman, K. Basso, et al.C. Wiggins, G. Stolovitzky, R. Dalla Favera, A. Califano posted to aracne dragan network regulatory by ptrobajo on 2008-10-16 21:36:48 as along with 18 people frohike dolchan tonamswish Neeperando akraemer APRegier verdicchio behindtherabbit kaarsinogen mbehbah1 druvus giovenko kentsis tmmurali jfr shigepong natstreet heliopais
	Discrimination of Direct and Indirect Interactions in a Network of Regulatory Effects [My Copy] Journal of Computational Biology, Vol. 14, No. 9. (2007), pp. 1217-1228. by Achim Tresch, T. Beissbarth, H. Sultmann, R. Kuner, A. Poustka, A. Buness posted to dragan interaction network regulatory by ptrobajo on 2008-10-13 13:24:13 as along with 2 people systemsbiology tmmurali
	SkyGraph: an algorithm for important subgraph discovery in relational graphs [My Copy] Data Mining and Knowledge Discovery In Data Mining and Knowledge Discovery, Vol. 17, No. 1. (1 August 2008), pp. 57-76. by Apostolos Papadopoulos, Apostolos Lyritsis, Yannis Manolopoulos posted to dragan frequent item network set subgraph by ptrobajo on 2008-08-01 08:45:16 as along with 1 person tmmurali
	Experimental design for efficient identification of gene regulatory networks using sparse Bayesian models [My Copy] BMC Systems Biology, Vol. 1, No. 1. (2007) by Florian Steinke, Matthias Seeger, Koji Tsuda posted to bayesian design dragan experiment knockout network reconstruction by ptrobajo on 2008-07-31 15:59:55 as
	Reconstructing gene-regulatory networks from time series, knock-out data, and prior knowledge [My Copy] BMC Systems Biology, Vol. 1, No. 1. (2007), 11. by Florian Geier, Jens Timmer, Christian Fleck posted to bayesian dragan knockout network reconstruction series time by ptrobajo on 2008-07-31 15:53:18 as along with 6 people mjoach edwardmorrissey guhjy tuck wnpx Ao_Li2007
	A Bayesian regression approach to the inference of regulatory networks from gene expression data [My Copy] Bioinformatics, Vol. 21, No. 14. (15 July 2005), pp. 3131-3137. by Simon Rogers, Mark Girolami posted to bayesian dragan knockout network reconstruction regression by ptrobajo on 2008-07-31 15:49:58 as along with 3 people engelhardt siebert tvdbulck
	Using the topology of metabolic networks to predict viability of mutant strains. [My Copy] Biophys J, Vol. 91, No. 6. (September 2006), pp. 2304-2311. by Z. Wunderlich, L. A. Mirny posted to dragan knockout metabolic miranda mutant network topology by ptrobajo on 2008-07-30 10:54:50 as along with 2 people kentsis cckan
	Mining co-regulated gene profiles for the detection of functional associations in gene expression data [My Copy] Bioinformatics, Vol. 23, No. 15. (1 August 2007), pp. 1927-1935. by Attila Gyenesei, Ulrich Wagner, Simon Barkow-Oesterreicher, Etzard Stolte, Ralph Schlapbach posted to dragan expression gene itemset network by ptrobajo on 2008-07-03 15:53:18 as along with 4 people meanerelk shigepong isimpson renatomilani
	Building and analysing genome-wide gene disruption networks. [My Copy] Bioinformatics (Oxford, England), Vol. 18 Suppl 2 (2002) by J. Rung, T. Schlitt, A. Brazma, K. Freivalds, J. Vilo posted to dragan emiel inference knockout network perturbation by ptrobajo on 2008-06-18 10:35:44 as
	Detecting hierarchical structure in molecular characteristics of disease using transitive approximations of directed graphs. [My Copy] Bioinformatics (19 February 2008) by Juby Jacob, Marcel Jentsch, Dennis Kostka, Stefan Bentink, Rainer Spang posted to approximation dragan graph transitive by ptrobajo on 2008-04-05 21:56:35 as along with 2 people czeller shigepong
	Computing Knock-Out Strategies in Metabolic Networks [My Copy] Journal of Computational Biology, Vol. 15, No. 3. (2008), pp. 259-268. by Utz-Uwe Haus, Steffen Klamt, Tamon Stephen posted to dragan elementary knockout metabolic mode network by ptrobajo on 2008-03-31 19:36:49 as along with 5 people and 1 group tmmurali balicea jiny Borelli longoka Frontiers in Diabetes and Obesity

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network	17
knockout	9
regulatory	6
inference	4
reconstruction	4
bayesian	3
perturbation	3
benchmark	2
emiel	2
expression	2
frequent	2
gene	2
itemset	2
metabolic	2
module	2
subgraph	2
approximation	1
aracne	1
boolean	1
coexpression	1
comparative	1
compendium	1
design	1
direct	1
elementary	1
experiment	1
factor	1
graph	1
interaction	1
item	1
lasso	1
miranda	1
mode	1
mutant	1
regression	1
review	1
rnai	1
roc	1
series	1
set	1
signaling	1
synthetic	1
syntren	1
time	1
topology	1
transcription	1
transcriptional	1
transitive	1
yeast	1

Tag dragan [20 articles] Export

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