Tag e-cell [20 articles] Export Sort

Recent papers classified by the tag e-cell.

Hide details

	A new multicompartmental reaction-diffusion modeling method links transient membrane attachment of E. coli MinE to E-ring formation [My Copy] Systems and Synthetic Biology by Satya N. V. Arjunan, Masaru Tomita posted to visualization three-dimensional theory surface stochastic spatiocyte software simulations simulation reaction-diffusion prediction oscillation noise multiscale multicompartment molecular_crowding models modelling modeling model mine minde mind mincde minc min methods methodology method membrane lattice imaging ftsz escherichia_coli ecoli e-ring e-cell dynamics division diffusion development cytokinesis crowding coarse_grain cell-division biophysics bacteria algorithm 3d by arjunan on 2009-12-13 04:39:09 as
	In silico modeling and metabolome analysis of long-stored erythrocytes to improve blood storage methods. [My Copy] Journal of biotechnology (18 August 2009) by Taiko Nishino, Ayako Yachie-Kinoshita, Akiyoshi Hirayama, Tomoyoshi Soga, Makoto Suematsu, Masaru Tomita posted to mt-rg erythrocyte e-cell computer-simulation by ynaito on 2009-09-24 02:07:04 as
	Multiple high-throughput analyses monitor the response of E. coli to perturbations. [My Copy] Science (New York, N.Y.), Vol. 316, No. 5824. (27 April 2007), pp. 593-597. by Nobuyoshi Ishii, Kenji Nakahigashi, Tomoya Baba, et al.Martin Robert, Tomoyoshi Soga, Akio Kanai, Takashi Hirasawa, Miki Naba, Kenta Hirai, Aminul Hoque, Pei Yee Y. Ho, Yuji Kakazu, Kaori Sugawara, Saori Igarashi, Satoshi Harada, Takeshi Masuda, Naoyuki Sugiyama, Takashi Togashi, Miki Hasegawa, Yuki Takai, Katsuyuki Yugi, Kazuharu Arakawa, Nayuta Iwata, Yoshihiro Toya, Yoichi Nakayama, Takaaki Nishioka, Kazuyuki Shimizu, Hirotada Mori, Masaru Tomita posted to systems-biology e-cell computer-simulation by ynaito on 2009-09-23 07:20:06 as along with 8 people and 1 group JeremyZucker cgaugain thomaskelder jjray raiyar dylan77 ytoya IgorG steinmetzlab
	Roles of Hemoglobin Allostery in Hypoxia-induced Metabolic Alterations in Erythrocytes: SIMULATION AND ITS VERIFICATION BY METABOLOME ANALYSIS [My Copy] J. Biol. Chem., Vol. 282, No. 14. (6 April 2007), pp. 10731-10741. by Ayako Kinoshita, Kosuke Tsukada, Tomoyoshi Soga, et al.Takako Hishiki, Yuki Ueno, Yoichi Nakayama, Masaru Tomita, Makoto Suematsu posted to computer-simulation e-cell mt-rg by ynaito on 2009-03-25 05:11:03 as along with 1 person and 1 group sobolevnrm baker-group
	A mathematical model for the Kai-protein-based chemical oscillator and clock gene expression rhythms in cyanobacteria. [My Copy] Journal of biological rhythms, Vol. 22, No. 1. (February 2007), pp. 69-80. by F. Miyoshi, Y. Nakayama, K. Kaizu, H. Iwasaki, M. Tomita posted to computer-simulation e-cell mt-rg by ynaito on 2009-03-25 05:08:42 as
	A microarray data-based semi-kinetic method for predicting quantitative dynamics of genetic networks. [My Copy] BMC Bioinformatics, Vol. 6 (2005) by K. Yugi, Y. Nakayama, S. Kojima, T. Kitayama, M. Tomita posted to computer-simulation e-cell mt-rg by ynaito on 2009-03-25 05:04:27 as along with 2 people gespim bertelsen
	Hybrid dynamic/static method for large-scale simulation of metabolism [My Copy] Theoretical Biology and Medical Modelling, Vol. 2, No. 1. (2005), 42. by Katsuyuki Yugi, Yoichi Nakayama, Ayako Kinoshita, Masaru Tomita posted to computer-simulation e-cell mt-rg by ynaito on 2009-03-25 05:02:09 as along with 1 person abhishek_tiwari
	Dynamic simulation of red blood cell metabolism and its application to the analysis of a pathological condition [My Copy] Theoretical Biology and Medical Modelling, Vol. 2, No. 1. (2005) by Yoichi Nakayama, Ayako Kinoshita, Masaru Tomita posted to computer-simulation e-cell mt-rg by ynaito on 2009-03-25 05:01:48 as along with 2 people fishtank csanford
	Toward large-scale modeling of the microbial cell for computer simulation. [My Copy] J Biotechnol, Vol. 113, No. 1-3. (30 September 2004), pp. 281-294. by N. Ishii, M. Robert, Y. Nakayama, A. Kanai, M. Tomita posted to computer-simulation e-cell mt-rg by ynaito on 2009-03-25 05:01:24 as along with 9 people and 3 groups csanford eldan wnpx Doug cottrell livingthingdan josepe fishtank roland_ewald livingthing dIEMoSIRIS MoSi-Rostock
	[Computer models of plant metabolism] [My Copy] Tanpakushitsu kakusan koso. Protein, nucleic acid, enzyme, Vol. 48, No. 15 Suppl. (November 2003), pp. 2205-2210. by N. Ishii, Y. Nakayama, M. Tomita posted to computer-simulation e-cell japanese mt-rg by ynaito on 2009-03-25 04:59:45 as
	[E-Cell simulation system and its application to the modeling of circadian rhythm] [My Copy] Seikagaku. The Journal of Japanese Biochemical Society, Vol. 75, No. 1. (January 2003), pp. 5-16. by F. Miyoshi, Y. Nakayama, M. Tomita posted to computer-simulation e-cell japanese mt-rg by ynaito on 2009-03-25 04:59:13 as
	E-CELL: Software Environment for Whole Cell Simulation. [My Copy] Genome informatics. Workshop on Genome Informatics, Vol. 8 (1997), pp. 147-155. by M. Tomita, K. Hashimoto, K. Takahashi, et al.T. Shimizu, Y. Matsuzaki, F. Miyoshi, K. Saito, S. Tanida, K. Yugi, J. C. Venter, C. A. Hutchison posted to computer-simulation e-cell mt-rg by ynaito on 2009-03-24 14:19:51 as
	E-CELL: software environment for whole-cell simulation [My Copy] Bioinformatics, Vol. 15, No. 1. (1 January 1999), pp. 72-84. by M. Tomita, K. Hashimoto, K. Takahashi, et al.T. S. Shimizu, Y. Matsuzaki, F. Miyoshi, K. Saito, S. Tanida, K. Yugi, J. C. Venter, Ca Hutchison posted to computer-simulation e-cell mt-rg by ynaito on 2009-03-24 14:19:35 as along with 3 people antonkratz chrn johnpeterwalsh
	E-Cell 2: multi-platform E-Cell simulation system. [My Copy] Bioinformatics, Vol. 19, No. 13. (1 September 2003), pp. 1727-1729. by K. Takahashi, N. Ishikawa, Y. Sadamoto, et al.H. Sasamoto, S. Ohta, A. Shiozawa, F. Miyoshi, Y. Naito, Y. Nakayama, M. Tomita posted to computer-simulation e-cell mt-rg by ynaito on 2009-03-24 14:09:55 as along with 2 people chrn mattis23
	Construction of a biological tissue model based on a single-cell model: a computer simulation of metabolic heterogeneity in the liver lobule. [My Copy] Artificial life, Vol. 14, No. 1. (2008), pp. 3-28. by H. Ohno, Y. Naito, H. Nakajima, M. Tomita posted to e-cell simulation by csanford on 2009-01-13 05:49:26 as along with 1 person ynaito
	A multi-algorithm, multi-timescale method for cell simulation [My Copy] Bioinformatics, Vol. 20, No. 4. (1 March 2004), pp. 538-546. by Kouichi Takahashi, Kazunari Kaizu, Bin Hu, Masaru Tomita posted to e-cell modelling simulation by csanford on 2008-05-21 01:22:41 as along with 7 people and 3 groups arjunan fierykylin m_j chrn carmaus dagmar lenov dIEMoSIRIS MoSi-Rostock compneur
	Whole-cell simulation: a grand challenge of the 21st century [My Copy] Trends in Biotechnology, Vol. 19, No. 6. (1 June 2001), pp. 205-210. by Masaru Tomita posted to e-cell modelling simulation by csanford on 2008-05-21 01:11:08 as along with 1 person hadesnumb
	DARPP-32 is a robust integrator of dopamine and glutamate signals. [My Copy] PLoS Comput Biol, Vol. 2, No. 12. (22 December 2006), e176. by E. Fernandez, R. Schiappa, J. A. Girault, N. Le Novère posted to darpp-32 dopamine e-cell glutamate signalling simulation synapse by lenov on 2007-10-15 16:29:36 as along with 4 people daforerog dagmar mattions awooga
	Metabolome analysis and metabolic simulation [My Copy] Metabolomics, Vol. 1, No. 1. (2 March 2005), pp. 29-37. by Nobuyoshi Ishii, Tomoyoshi Soga, Takaaki Nishioka, Masaru Tomita posted to e-cell kinetic_simulation-review by fishtank on 2007-09-14 23:30:30 as
	Whole-cell simulation: a grand challenge of the 21st century. [My Copy] Trends Biotechnol, Vol. 19, No. 6. (June 2001), pp. 205-210. by M. Tomita posted to e-cell kinetic_simulation-review by fishtank on 2007-09-14 23:27:11 as along with 4 people wnpx Doug josepe phoenixzxl

Note: You may cite this page as: http://www.citeulike.org/tag/e-cell

Sort by:
Order:	Default Ascending Descending
Empty fields:	Default First Last

computer-simulation	13
simulation	13
mt-rg	12
modeling	5
systems-biology	5
modelling	4
kinetic_simulation-review	3
simulation-system	3
software	3
cell	2
japanese	2
refs_ox	2
3d	1
algorithm	1
bacteria	1
biology	1
biophysics	1
cell-division	1
coarse_grain	1
crowding	1
cytokinesis	1
darpp-32	1
development	1
diffusion	1
distributed_simulation	1
division	1
dopamine	1
dynamics	1
e-ring	1
ecoli	1
erythrocyte	1
escherichia_coli	1
ftsz	1
glutamate	1
imaging	1
lattice	1
membrane	1
metabolism	1
method	1
methodology	1
methods	1
min	1
minc	1
mincde	1
mind	1
minde	1
mine	1
model	1
models	1
molecular_crowding	1
multicompartment	1
multiscale	1
noise	1
oscillation	1
prediction	1
reaction-diffusion	1
signalling	1
simulations	1
spatiocyte	1
stochastic	1
surface	1
synapse	1
theory	1
three-dimensional	1
visualization	1
wholecell	1

Tag e-cell [20 articles] Export Sort

Related Tags