Tag ecoli [at least 200 articles]

Recent papers classified by the tag ecoli.

	A two-component phosphotransfer network involving ArcB, ArcA, and RssB coordinates synthesis and proteolysis of sigmaS (RpoS) in E. coli. [My Copy] Genes & development, Vol. 19, No. 22. (15 November 2005), pp. 2770-2781. by F. Mika, R. Hengge posted to ecoli arcb by viktor21614 on 2009-07-02 10:06:35 as
	Adaptation of Escherichia coli to redox environments by gene expression [My Copy] Molecular Microbiology, Vol. 9, No. 1. (1993), pp. 9-15. by S. Iuchi, E. C. C. Lin posted to expression ecoli arcb by viktor21614 on 2009-07-02 08:35:36 as
	Expression of dual TCR on DO11.10 T cells allows for ovalbumin-induced oral tolerance to prevent T cell-mediated colitis directed against unrelated enteric bacterial antigens. [My Copy] Journal of immunology (Baltimore, Md. : 1950), Vol. 172, No. 3. (1 February 2004), pp. 1515-1523. by P. Zhou, R. Borojevic, C. Streutker, D. Snider, H. Liang, K. Croitoru posted to ibd ecoli by AlfonsoVicenteSuarez on 2009-07-01 19:32:52 as
	T Helper 1 and T Helper 2 Cells Are Pathogenic in an Antigen-specific Model of Colitis [My Copy] J. Exp. Med., Vol. 195, No. 1. (7 January 2002), pp. 71-84. by Nuzhat Iqbal, James R. Oliver, Frederic H. Wagner, Audrey S. Lazenby, Charles O. Elson, Casey T. Weaver posted to ibd ecoli by AlfonsoVicenteSuarez on 2009-06-29 18:10:04 as
	Adaptive prediction of environmental changes by microorganisms [My Copy] Nature (17 June 2009) by Amir Mitchell, Gal H. Romano, Bella Groisman, et al.Avihu Yona, Erez Dekel, Martin Kupiec, Orna Dahan, Yitzhak Pilpel posted to yeast evolution environment ecoli by michaelbarton on 2009-06-26 09:52:02 as
	A Live‐Attenuated Vaccine for the Treatment of Urinary Tract Infection by Uropathogenic Escherichia coli [My Copy] The Journal of Infectious Diseases, Vol. 0, No. 0. (0000), pp. 000-000. by Benjamin k Billips, Ryan e Yaggie, John p Cashy, Anthony j Schaeffer, David j Klumpp posted to vaccine uti ecoli by Amazoness on 2009-06-23 05:01:42 as
	An integrated network approach identifies the isobutanol response network of Escherichia coli. [My Copy] Molecular systems biology, Vol. 5 (2009) by M. P. Brynildsen, J. C. Liao posted to igem ecoli bio_fuel by grahamc on 2009-06-23 04:23:35 as along with 1 person Winzer
	Multi-wavelength microflow cytometer using groove-generated sheath flow [My Copy] Lab Chip, Vol. 9, No. 13. (2009), pp. 1942-1950. by Joel P. Golden, Jason S. Kim, Jeffrey S. Erickson, et al.Lisa R. Hilliard, Peter B. Howell, George P. Anderson, Mansoor Nasir, Frances S. Ligler posted to optics ecoli by nelfarargy on 2009-06-21 12:28:22 as
	Effects of Discontinuities in the DNA Template on Abortive Initiation and Promoter Escape by Escherichia coli RNA Polymerase [My Copy] J. Biol. Chem., Vol. 282, No. 37. (14 September 2007), pp. 26917-26927. by Qun Wang, Thomas D. Tullius, Judith R. Levin posted to transcription promoter escape ecoli characterisation by Vincent_Rouilly on 2009-06-19 15:14:28 as
	Rational design of a fusion partner for membrane protein expression in E. coli. [My Copy] Protein science : a publication of the Protein Society (15 June 2009) by J. Luo, J. Choulet, J. C. Samuelson posted to membrane_protein expression ecoli cloning by viktor21614 on 2009-06-19 07:51:42 as
	Application of Functional Genomics to Pathway Optimization for Increased Isoprenoid Production [My Copy] Appl. Environ. Microbiol., Vol. 74, No. 10. (15 May 2008), pp. 3229-3241. by Lance Kizer, Douglas J. Pitera, Brian F. Pfleger, Jay D. Keasling posted to transciptome mutant metabolome engineered ecoli by adampah on 2009-06-18 21:56:39 as
	Global functional atlas of Escherichia coli encompassing previously uncharacterized proteins. [My Copy] PLoS biology, Vol. 7, No. 4. (28 April 2009) by P. Hu, S. C. Janga, M. Babu, et al.J. J. Díaz-Mejía, G. Butland, W. Yang, O. Pogoutse, X. Guo, S. Phanse, P. Wong, S. Chandran, C. Christopoulos, A. Nazarians-Armavil, N. K. Nasseri, G. Musso, M. Ali, N. Nazemof, V. Eroukova, A. Golshani, A. Paccanaro, J. F. Greenblatt, G. Moreno-Hagelsieb, A. Emili posted to ecoli by aangelo on 2009-06-16 07:29:46 as along with 2 people robfsouza grahamc
	Synthetic Gene Networks That Count [My Copy] Science, Vol. 324, No. 5931. (29 May 2009), pp. 1199-1202. by Ari E. Friedland, Timothy K. Lu, Xiao Wang, David Shi, George Church, James J. Collins posted to syntheticbiology journalclub ecoli biotechnology bioengineering biocomputing by myzhang on 2009-06-14 23:46:14 as along with 11 people reyez austin alexknight twatanab kshundyak phoenixzxl sen_cheng leliavski jbhiatt jjray dswan
	Purification and characterization of 3-dehydroquinase from Escherichia coli. [My Copy] The Biochemical journal, Vol. 239, No. 3. (1 November 1986), pp. 699-704. by S. Chaudhuri, J. M. Lambert, L. A. McColl, J. R. Coggins posted to enzyme ecoli by nelfarargy on 2009-06-13 20:13:19 as
	The purification of shikimate dehydrogenase from Escherichia coli. [My Copy] The Biochemical journal, Vol. 226, No. 1. (15 February 1985), pp. 217-223. by S. Chaudhuri, J. R. Coggins posted to enzyme ecoli by nelfarargy on 2009-06-13 19:59:52 as
	Comparison of real-time PCR methods for detection of and O157:H7, and introduction of a general internal amplification control [My Copy] Journal of Microbiological Methods, Vol. 59, No. 3. (December 2004), pp. 337-349. by M. Klerks, C. Zijlstra, A. Vanbruggen posted to rt-qpcr protocol measurement gfp gene_expression ecoli by Vincent_Rouilly on 2009-06-09 17:15:17 as
	Construction of Escherichia coli K-12 in-frame, single-gene knockout mutants: the Keio collection [My Copy] Mol Syst Biol, Vol. 2, No. 1. (21 February 2006), pp. msb4100050-E1-msb4100050-E11. by Tomoya Baba, Takeshi Ara, Miki Hasegawa, et al.Yuki Takai, Yoshiko Okumura, Miki Baba, Kirill A. Datsenko, Masaru Tomita, Barry L. Wanner, Hirotada Mori posted to essential_genes ecoli by monkey_boy on 2009-06-02 14:38:51 as along with 4 people dantarjan balajis wilsoros hryk
	Comparative genome sequencing of Escherichia coli allows observation of bacterial evolution on a laboratory timescale [My Copy] Nature Genetics, Vol. 38, No. 12. (05 November 2006), pp. 1406-1412. by Christopher D. Herring, Anu Raghunathan, Christiane Honisch, et al.Trina Patel, Kenyon M. Applebee, Andrew R. Joyce, Thomas J. Albert, Frederick R. Blattner, Dirk van den Boom, Charles R. Cantor, Bernhard posted to next_generation ecoli comperative_genomics by druvus on 2009-05-26 12:00:19 as along with 4 people yujiangwang alexl dylan77 emptyhb
	Pervasive joint influence of epistasis and plasticity on mutational effects in Escherichia coli [My Copy] Nat Genet, Vol. 36, No. 4. (April 2004), pp. 423-426. by Susanna K. Remold, Richard E. Lenski posted to epistasis_eg ecoli by maren on 2009-05-18 06:40:23 as
	A DNA damage checkpoint in Escherichia coli [My Copy] DNA Repair, Vol. 1, No. 8. (6 August 2002), pp. 699-701. by J. Cairns posted to ecoli dna damage checkpoint by redondoself on 2009-05-08 04:41:48 as
	Clonal Interference and the Periodic Selection of New Beneficial Mutations in Escherichia coli [My Copy] Genetics, Vol. 172, No. 4. (1 April 2006), pp. 2093-2100. by de Visser, Daniel E. Rozen posted to selection phd mutations ecoli by pavitra on 2009-05-05 00:55:59 as
	Solid-State NMR Spectroscopy Detects Interactions between Tryptophan Residues of the E. coli Sugar Transporter GalP and the α-Anomer of the D-Glucose Substrate [My Copy] J. Am. Chem. Soc., Vol. 130, No. 4. (30 January 2008), pp. 1236-1244. by S. G. Patching, P. J. F. Henderson, R. B. Herbert, D. A. Middleton posted to tryptophan substrate_recognition ssnmr ecoli by viktor21614 on 2009-04-27 16:47:50 as
	Parallel adaptive evolution cultures of Escherichia coli lead to convergent growth phenotypes with different gene expression states [My Copy] Genome Res., Vol. 15, No. 10. (1 October 2005), pp. 1365-1372. by Stephen S. Fong, Andrew R. Joyce, Bernhard O. Palsson posted to metabolic-engineering expression-data evolutionary-dynamics ecoli by JeremyZucker on 2009-04-24 22:22:19 as along with 1 person discreteonyxorb
	In silico design and adaptive evolution of Escherichia coli for production of lactic acid. [My Copy] Biotechnol Bioeng, Vol. 91, No. 5. (5 September 2005), pp. 643-648. by S. S. Fong, A. P. Burgard, C. D. Herring, et al.E. M. Knight, F. R. Blattner, C. D. Maranas, B. O. Palsson posted to metabolic-engineering fba evolutionary-dynamics ecoli by JeremyZucker on 2009-04-24 22:20:03 as along with 1 person comb
	Coding-Sequence Determinants of Gene Expression in Escherichia coli [My Copy] Science, Vol. 324, No. 5924. (10 April 2009), pp. 255-258. by Grzegorz Kudla, Andrew W. Murray, David Tollervey, Joshua B. Plotkin posted to rna-structure protein-production gene-expression gc-content ecoli codon-usage by michaelbarton on 2009-04-22 10:15:15 as along with 28 people and 1 group samgj dswan bpcusack emptyhb sameersoi dpsuslo8 anwazo Vincent_Rouilly kintoki erel10 fenghezi VGreiff ramanuja austin twatanab coela polivares rpatward lizbiogen jdbowes operon jasontsai absterga jbhiatt jjray kshundyak zwang friendpine BergmanLab
	Escherichia coli maltose-binding protein is uncommonly effective at promoting the solubility of polypeptides to which it is fused [My Copy] PRS, Vol. 8, No. 08. (1999), pp. 1668-1674. by Rachel B. Kapust, David S. Waugh posted to solubility mbp ecoli affinity-tag by ts3435 on 2009-04-20 11:55:10 as
	Operons in Escherichia coli: genomic analyses and predictions. [My Copy] Proc Natl Acad Sci U S A, Vol. 97, No. 12. (6 June 2000), pp. 6652-6657. by H. Salgado, G. Moreno-Hagelsieb, T. F. Smith, J. Collado-Vides posted to prediction operon ecoli by nikkiwithers on 2009-04-13 09:45:01 as along with 4 people pkm ziquje kaarsinogen vladimirov
	A totally synthetic plasmid for general cloning, gene expression and mutagenesis in Escherichia coli [My Copy] Gene, Vol. 94, No. 1. (28 September 1990), pp. 103-107. by W. Mandecki posted to synthetic plasmid minimal_plasmid ecoli dna by Vincent_Rouilly on 2009-03-26 15:51:50 as
	Site-directed mutagenesis and expression of the soluble form of the family IIIa cellulose binding domain from the cellulosomal scaffolding protein of Clostridium cellulovorans. [My Copy] Journal of bacteriology, Vol. 187, No. 20. (October 2005), pp. 7146-7149. by K. Murashima, A. Kosugi, R. H. Doi posted to mbp expression ecoli by robert on 2009-03-25 14:43:29 as
	DISTILLER: a data integration framework to reveal condition dependency of complex regulons in Escherichia coli [My Copy] Genome Biology, Vol. 10 (06 March 2009), R27. by Karen, Kathleen Marchal posted to software regulon ecoli by druvus on 2009-03-24 11:33:45 as along with 4 people natstreet tvdbulck biomcgary dolchan
	Exploring the antimicrobial action of a carbon monoxide-releasing compound through whole-genome transcription profiling of Escherichia coli [My Copy] Microbiology, Vol. 155, No. 3. (1 March 2009), pp. 813-824. by Ligia S. Nobre, Fatima Al-Shahrour, Joaquin Dopazo, Ligia M. Saraiva posted to microarray ecoli co by ntakano on 2009-03-23 09:42:01 as
	High deleterious genomic mutation rate in stationary phase of Escherichia coli. [My Copy] Science (New York, N.Y.), Vol. 302, No. 5650. (28 November 2003), pp. 1558-1560. by L. Loewe, V. Textor, S. Scherer posted to mutation ecoli by Annab on 2009-03-21 16:55:21 as
	The influence of cellular physiology on the initiation of mutational pathways in Escherichia coli populations. [My Copy] Proceedings. Biological sciences / The Royal Society, Vol. 270, No. 1517. (22 April 2003), pp. 843-848. by L. Notley-McRobb, S. Seeto, T. Ferenci posted to mutation ecoli by Annab on 2009-03-21 16:54:32 as
	Essential Core of Protein−Protein Interaction Network in Escherichia coli [My Copy] Journal of Proteome Research, Vol. 0, No. 0. (0000) by Chen-Ching Lin, Hsueh-Fen Juan, Jen-Tsung Hsiang, Yih-Chii Hwang, Hirotada Mori, Hsuan-Cheng Huang posted to protein-protein network interaction ecoli by neils on 2009-03-15 11:01:00 as
	Identifying essential genes in Escherichia coli from a metabolic optimization principle. [My Copy] Proceedings of the National Academy of Sciences of the United States of America (5 February 2009) by Carlotta Martelli, Andrea De Martino, Enzo Marinari, Matteo Marsili, Isaac Pérez P. Castillo posted to optimization ecoli by lflorez on 2009-03-11 10:02:51 as along with 3 people marinari trfield michaelbarton
	Development of genetic circuitry exhibiting toggle switch or oscillatory behavior in Escherichia coli. [My Copy] Cell, Vol. 113, No. 5. (30 May 2003), pp. 597-607. by M. R. Atkinson, M. A. Savageau, J. T. Myers, A. J. Ninfa posted to synthetic-biology switch oscillator ecoli bp205 by jasonpark1 to the group BP205 on 2009-03-11 06:40:10 as along with 2 people rklancer balabu
	Genome-scale reconstruction of the Lrp regulatory network in Escherichia coli. [My Copy] Proceedings of the National Academy of Sciences of the United States of America (3 December 2008) by Byung-Kwan K. Cho, Christian L L. Barrett, Eric M M. Knight, Young Seoub S. Park, Bernhard Ø O. Palsson posted to transcription-factors gene-regulation ecoli chipseq chipchip by JeremyZucker on 2009-03-05 19:33:07 as along with 2 people cerca gmunson
	Solution structure of the E. coli 70S ribosome at 11.5 A resolution. [My Copy] Cell, Vol. 100, No. 5. (3 March 2000), pp. 537-549. by I. S. Gabashvili, R. K. Agrawal, C. M. Spahn, et al.R. A. Grassucci, D. I. Svergun, J. Frank, P. Penczek posted to structure solution ribosome reconstruction processing microscopy image gtp-ase ecoli docking cryo-electron bacteria by interscientist on 2009-03-05 01:11:54 as
	Over-production of proteins in Escherichia coli: mutant hosts that allow synthesis of some membrane proteins and globular proteins at high levels. [My Copy] J Mol Biol, Vol. 260, No. 3. (19 July 1996), pp. 289-298. by B. Miroux, J. E. Walker posted to overexpression membrane_protein ecoli by viktor21614 on 2009-02-23 09:07:01 as along with 2 people mirkocortese netterpaladin
	The toxicity of recombinant proteins in Escherichia coli: a comparison of overexpression in BL21(DE3), C41(DE3), and C43(DE3) [My Copy] Protein Expression and Purification, Vol. 37, No. 1. (September 2004), pp. 203-206. by L. Dumonseignovert posted to protein overexpression ecoli by viktor21614 on 2009-02-21 15:38:26 as along with 1 person cat_hutchinson68
	Control of isocitrate dehydrogenase catalytic activity by protein phosphorylation in Escherichia coli. [My Copy] Journal of molecular microbiology and biotechnology, Vol. 9, No. 3-4. (2005), pp. 132-146. by A. J. Cozzone, M. El-Mansi posted to idh enzym ecoli by chem-pion to the group BioVT on 2009-02-19 01:25:14 as
	Rapid and efficient construction of markerless deletions in the Escherichia coli genome [My Copy] Nucl. Acids Res. (21 June 2008), gkn359. by Byung J. Yu, Kui H. Kang, Jun H. Lee, Bong H. Sung, Mi S. Kim, Sun C. Kim posted to in_vivo homology_recombination genome_engineering ecoli by Vincent_Rouilly on 2009-02-18 17:09:23 as
	Two-step red-mediated recombination for versatile high-efficiency markerless DNA manipulation in Escherichia coli. [My Copy] BioTechniques, Vol. 40, No. 2. (February 2006), pp. 191-197. by B. K. Tischer, J. von Einem, B. Kaufer, N. Osterrieder posted to lamda_red in_vivo homology_recombination ecoli by Vincent_Rouilly on 2009-02-18 17:06:14 as
	Recombineering linear DNA that replicate stably in E. coli [My Copy] Plasmid, Vol. In Press, Corrected Proof by Yaw-Shin Ooi, Peter E. Warburton, Nikolai V. Ravin, Kumaran Narayanan posted to telomere linear_dna in_vivo homology_recombination ecoli dna_assembly by Vincent_Rouilly on 2009-02-18 13:29:18 as along with 4 people jec105 guhjy austin madhadron
	What makes the bacteriophage λ Red system useful for genetic engineering: molecular mechanism and biological function [My Copy] FEMS Microbiology Letters, Vol. 201, No. 1. (10 July 2001), pp. 9-14. by A. Poteete posted to lamda_red in_vivo homology_recombination ecoli by Vincent_Rouilly on 2009-02-18 12:02:55 as
	The large-scale organization of metabolic networks [My Copy] Nature, Vol. 407, No. 6804. (5 October 2000), pp. 651-654. by H. Jeong, B. Tombor, R. Albert, Z. N. Oltvai, A. L. Barabási posted to scale_free metabolism metabolic_network graph_theory ecoli complex_network by muraken on 2009-02-15 13:22:22 as along with 26 people and 3 groups dlobo schwartzjmc kentz camster snuppepuppan jpmague mague alexisgallagher bjorns Borelli shivaram lfriedl cmmorel alexg Shirakawa ddahlem gcalda grahamc jrbanga karfunkel Evangelia shung pmendes stefanoallesina shikin dylanwalker GEB dbk-lab kdl
	Simple sequence repeats in Escherichia coli: abundance, distribution, composition, and polymorphism. [My Copy] Genome research, Vol. 10, No. 1. (January 2000), pp. 62-71. by R. Gur-Arie, C. J. Cohen, Y. Eitan, L. Shelef, E. M. Hallerman, Y. Kashi posted to tandem repeat ecoli by druvus on 2009-01-30 13:32:17 as
	Visualization of proteins in intact cells with a clonable tag for electron microscopy [My Copy] Journal of Structural Biology (10 December 2008) by E. Diestra, J. Fontana, P. Guichard, S. Marco, C. Risco posted to tem protein em ecoli by viktor21614 on 2009-01-30 11:46:17 as along with 1 person ts3435
	Expression of the Escherichia coli pntAB genes encoding a membrane-bound transhydrogenase in Corynebacterium glutamicum improves l -lysine formation [My Copy] Applied Microbiology and Biotechnology, Vol. 75, No. 1. (1 May 2007), pp. 47-53. by Armin Kabus, Tobias Georgi, Volker Wendisch, Michael Bott posted to transhydrogenase metabolic-engineering lysine ecoli corynebacterium by JeremyZucker on 2009-01-30 02:04:48 as
	An analysis of determinants of amino acids substitution rates in bacterial proteins. [My Copy] Mol Biol Evol, Vol. 21, No. 1. (January 2004), pp. 108-116. by E. P. Rocha, A. Danchin posted to mdb-thesis evolutionary-rate evolution ecoli cost-minimisation amino-acid-usage amino-acid-substitution by michaelbarton on 2009-01-29 17:15:51 as along with 5 people and 1 group bjorns tny penka jpoyatos skumagai Nie

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