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Tag electrostatics [477 articles]

Recent papers classified by the tag electrostatics.
  • Variational theory for a single polyelectrolyte chain revisited
    The European Physical Journal E - Soft Matter, Vol. V14, No. 1. (1 May 2004), pp. 67-77.
    by M Manghi, RR Netz
    posted to electrostatics length persistence by wilsoros on 2006-10-19 00:58:20 as **
  • Molecular dynamics simulations of biomolecules: long-range electrostatic effects.
    Annu Rev Biophys Biomol Struct, Vol. 28 (1999), pp. 155-179.
    by C Sagui, TA Darden
    posted to electrostatics molecular-dynamics particle-mesh-ewald by ttjoseph on 2006-04-28 21:25:24 as *** along with 6 people onufriev lillekatt dgront RamuAnandakrishnan AndreaColetta r2s2
  • notes Biot-Savart-like law in electrostatics
    European Journal of Physics, Vol. 22, No. 1. (2001), pp. 31-38.
    by Oliveira, José A Miranda
    posted to biotsavart electrostatics by tarampam on 2008-08-29 21:46:25 as **
  • Mechanics of a process to assemble microspheres on a patterned electrode
    Applied Physics Letters, Vol. 88, No. 14. (2006)
    by Ting Zhu, Zhigang Suo, Adam Winkleman, George M Whitesides
    posted to electrostatics selfassembly by suopublications on 2006-07-18 22:36:56 as **
  • MMM2D: A fast and accurate summation method for electrostatic interactions in 2D slab geometries
    Comput Phys Commun, Vol. 148, No. 3. (2002), pp. 327-348.
    by A Arnold, C Holm
    posted to electrostatics ewald-summation by softsimu on 2008-01-19 21:20:32 as **
  • Multigrid methods for classical molecular dynamics simulations of biomolecules
    J Chem Phys, Vol. 114, No. 15. (2001), pp. 6578-6591.
    by C Sagui, T Darden
    posted to electrostatics multigrid by softsimu on 2007-12-12 15:35:31 as **
  • Comments on the numerical simulations of electrolytes in periodic boundary conditions
    The Journal of Chemical Physics, Vol. 101, No. 7. (1994), pp. 6080-6090.
    by Jean M Caillol
    posted to electrostatics ewald-summation by softsimu on 2008-01-19 21:21:44 as **
  • Effects of cations on dipalmitoyl phosphatidylcholine/cholesterol/water systems.
    Biochim Biophys Acta, Vol. 413, No. 1. (17 November 1975), pp. 24-32.
    by Y Inoko, T Yamaguchi, K Furuya, T Mitsui
    posted to electrostatics membranes popc by softsimu on 2007-12-14 00:55:04 as **
  • Monte Carlo algorithms for charged lattice gases
    Physical Review E (Statistical, Nonlinear, and Soft Matter Physics), Vol. 72, No. 1. (2005)
    by L Levrel, AC Maggs
    posted to electrostatics by softsimu on 2008-01-21 22:20:03 as **
  • Intramembrane Electrostatic Interactions Destabilize Lipid Vesicles
    Biophys. J., Vol. 83, No. 4. (1 October 2002), pp. 2007-2014.
    by Scott D Shoemaker, Kyle T Vanderlick
    posted to cardiolipin electrostatics by softsimu on 2008-01-28 16:28:26 as **
  • A comparison of Ewald summation techniques for planar surfaces
    Comput Phys Commun, Vol. 107, No. 1-3. (1997), pp. 167-186.
    by AH Widmann, DB Adolf
    posted to electrostatics ewald-summation by softsimu on 2007-12-12 15:47:32 as **
  • Methodological Issues in Lipid Bilayer Simulations
    J. Phys. Chem. B, Vol. 107, No. 35. (4 September 2003), pp. 9424-9433.
    by C Anezo, AH Devries, HD Holtje, DP Tieleman, SJ Marrink
    posted to electrostatics membranes by softsimu on 2008-01-21 17:45:00 as ** along with 1 person agrossfield
  • A particle-particle, particle-density algorithm for the calculation of electrostatic interactions of particles with slablike geometry
    The Journal of Chemical Physics, Vol. 127, No. 22. (2007)
    by Alireza S Ghasemi, Alexey Neelov, Stefan Goedecker
    posted to electrostatics ewald-summation by softsimu on 2007-12-12 00:16:56 as ** along with 1 person and 1 group sobolevnrm baker-group
  • Calculations of the electrostatic potential adjacent to model phospholipid bilayers.
    Biophys. J., Vol. 68, No. 3. (1 March 1995), pp. 729-738.
    by RM Peitzsch, M Eisenberg, KA Sharp, S Mclaughlin
    posted to electrostatics membranes poisson-boltzmann by softsimu on 2007-12-14 01:12:15 as **
  • Particle mesh Ewald method for three-dimensional systems with two-dimensional periodicity
    Chem. Phys. Lett., Vol. 340, No. 1-2. (2001), pp. 165-172.
    by M Kawata, U Nagashima
    posted to electrostatics p3m ewald-summation by softsimu on 2007-12-12 15:51:20 as **
  • Determination of Electrostatic Parameters for a Polarizable Force Field Based on the Classical Drude Oscillator
    J. Chem. Theory Comput., Vol. 1, No. 1. (11 January 2005), pp. 153-168.
    by VM Anisimov, G Lamoureux, IV Vorobyov, N Huang, B Roux, AD Mackerell
    posted to electrostatics force-fields by softsimu on 2008-04-11 19:28:10 as **
  • Dynamics of a local algorithm for simulating Coulomb interactions
    J Chem Phys, Vol. 117, No. 5. (2002), pp. 1975-1981.
    by AC Maggs
    posted to electrostatics by softsimu on 2007-12-12 15:39:13 as **
  • An alternative to Ewald sums part I: Identities for sums
    Molecular Simulation, Vol. 20, No. 3. (1998), pp. 179-200.
    by R Sperb
    posted to electrostatics lekner ewald-summation by softsimu on 2007-12-12 15:55:02 as **
  • Effects of Hofmeister Anions on DPPC Langmuir Monolayers at the Air-Water Interface
    J. Phys. Chem. B, Vol. 108, No. 39. (30 September 2004), pp. 15238-15245.
    by A Aroti, E Leontidis, E Maltseva, G Brezesinski
    posted to electrostatics membranes monolayers by softsimu on 2007-12-14 01:11:02 as **
  • Local electrostatics algorithm for classical molecular dynamics simulations
    The Journal of Chemical Physics, Vol. 127, No. 13. (2007), 134104.
    by Jörg Rottler
    posted to electrostatics by softsimu on 2007-12-12 15:13:32 as ** along with 5 people and 1 group sobolevnrm afenley mikaellund OndrejMarsalek michaelbussmann baker-group
  • Electrostatic interactions in a neutral model phospholipid bilayer by molecular dynamics simulations
    The Journal of Chemical Physics, Vol. 116, No. 7. (2002), pp. 3052-3057.
    by Leonor Saiz, Michael L Klein
    posted to electrostatics by softsimu on 2008-03-18 19:08:02 as **
  • Swelling of phospholipids by monovalent salt
    J. Lipid Res., Vol. 47, No. 2. (1 February 2006), pp. 302-309.
    by Horia I Petrache, Stephanie Tristram-Nagle, Daniel Harries, Norbert Kucerka, John F Nagle, Adrian V Parsegian
    posted to electrostatics membranes salt by softsimu on 2007-12-14 01:03:11 as **
  • Mixed Bilayer Containing Dipalmitoylphosphatidylcholine and Dipalmitoylphosphatidylserine: Lipid Complexation, Ion Binding, and Electrostatics
    Biophys. J., Vol. 85, No. 5. (1 November 2003), pp. 3120-3131.
    by Sagar A Pandit, David Bostick, Max L Berkowitz
    posted to electrostatics pops by softsimu on 2007-12-14 01:13:34 as ** along with 1 person robertvacha
  • Monte Carlo simulation of a model of water
    Physical Review E (Statistical, Nonlinear, and Soft Matter Physics), Vol. 72, No. 4. (2005)
    by AC Maggs
    posted to electrostatics by softsimu on 2008-01-21 22:18:59 as **
  • Simulating Nanoscale Dielectric Response
    Physical Review Letters, Vol. 96, No. 23. (2006)
    by AC Maggs, R Everaers
    posted to dielectrics electrostatics by softsimu on 2008-01-21 22:21:05 as **
  • Local Simulation Algorithms for Coulomb Interactions
    Physical Review Letters, Vol. 88, No. 19. (24 April 2002), 196402.
    by AC Maggs, V Rossetto
    posted to electrostatics by softsimu on 2008-01-21 22:20:27 as **
  • A continuum, script O sign(n) Monte Carlo algorithm for charged particles
    J Chem Phys, Vol. 120, No. 7. (2004), pp. 3119-3129.
    by J Rottler, AC Maggs
    posted to electrostatics monte-carlo by softsimu on 2007-12-12 15:40:01 as **
  • Strange electrostatics in physics, chemistry, and biology
    Physica A: Statistical Mechanics and its Applications, Vol. 352, No. 1. (1 July 2005), pp. 43-52.
    by Yan Levin
    posted to electrostatics by softsimu on 2007-12-14 00:46:05 as **
  • A novel method for calculating electrostatic interactions in 2D periodic slab geometries
    Chem. Phys. Lett., Vol. 354, No. 3-4. (2002), pp. 324-330.
    by A Arnold, C Holm
    posted to electrostatics by softsimu on 2007-12-12 15:46:46 as **
  • Simulating charged systems with ESPResSo
    Lect. Notes Phys., Vol. 703 (2006), pp. 193-221.
    by A Arnold, BAF Mann, C Holm, M Ferrario, G Ciccotti, K Binder
    posted to electrostatics espresso molecular-dynamics ewald-summation by softsimu on 2007-12-12 16:02:44 as **
  • The Range and Shielding of Dipole-Dipole Interactions in Phospholipid Bilayers
    Biophys. J., Vol. 87, No. 4. (1 October 2004), pp. 2433-2445.
    by Jakob Wohlert, Olle Edholm
    posted to electrostatics by softsimu on 2008-01-23 07:04:21 as **
  • Lipid Bilayers Driven to a Wrong Lane in Molecular Dynamics Simulations by Subtle Changes in Long-Range Electrostatic Interactions
    J. Phys. Chem. B, Vol. 108, No. 14. (8 April 2004), pp. 4485-4494.
    by M Patra, M Karttunen, MT Hyvonen, E Falck, I Vattulainen
    posted to electrostatics ewald-summation membranes by softsimu on 2008-01-21 17:44:40 as ** along with 1 person dimka
  • Efficient methods to compute long-range interactions for soft matter systems
    Adv. Polym. Sci., Vol. 185 (2005), pp. 59-109.
    by A Arnold, C Holm
    posted to electrostatics lekner ewald-summation by softsimu on 2007-12-12 16:01:40 as **
  • Ewald summation based on nonuniform fast Fourier transform
    Chemical Physics Letters, Vol. 425, No. 1-3. (3 July 2006), pp. 142-147.
    by Fredrik Hedman, Aatto Laaksonen
    posted to electrostatics ewald-summation by softsimu on 2008-01-29 23:41:22 as **
  • Multiscale Monte Carlo Algorithm for Simple Fluids
    Physical Review Letters, Vol. 97, No. 19. (2006)
    by AC Maggs
    posted to coarse-graining electrostatics by softsimu on 2008-01-21 22:18:37 as **
  • Molecular dynamics simulations of lipid bilayers: major artifacts due to truncating electrostatic interactions.
    Biophys J, Vol. 84, No. 6. (June 2003), pp. 3636-3645.
    by M Patra, M Karttunen, MT Hyvönen, E Falck, P Lindqvist, I Vattulainen
    posted to electrostatics ewald-summation membranes by softsimu on 2008-01-21 17:45:28 as ** along with 2 people dimka easybakemuffin
  • The electrostatics of lipid surfaces
    Chemistry and Physics of Lipids, Vol. 101, No. 1. (August 1999), pp. 3-35.
    by Marek Langner, Krystian Kubica
    posted to electrostatics by softsimu on 2008-03-18 19:07:41 as **
  • Long-range interactions and parallel scalability in molecular simulations
    Comput Phys Commun, Vol. 176, No. 1. (2007), pp. 14-22.
    by M Patra, MT Hyvo?nen, E Falck, M Sabouri-Ghomi, I Vattulainen, M Karttunen
    posted to electrostatics ewald-summation by softsimu on 2007-12-12 14:23:48 as **
  • Test of the Gouy-Chapman Theory for a Charged Lipid Membrane against Explicit-Solvent Molecular Dynamics Simulations
    Physical Review Letters, Vol. 101, No. 3. (2008)
    by Myunggi Yi, Hugh Nymeyer, Huan X Zhou
    posted to gouy-chapman electrostatics coarse-graining by softsimu on 2008-09-27 14:36:52 as ** along with 3 people and 1 group j_vinals sobolevnrm agrossfield baker-group
  • Auxiliary field simulation and Coulomb's law
    Comput Phys Commun, Vol. 169, No. 1-3., pp. 160-165.
    by AC Maggs, J Rottler, M Ferrario, S Melchionna, C Pierleoni
    posted to electrostatics monte-carlo by softsimu on 2007-12-12 15:43:53 as **
  • Coulomb interactions via local dynamics: A molecular-dynamics algorithm
    J Phys Condens Matter, Vol. 16, No. 38. (2004)
    by I Pasichnyk, B Dünweg
    posted to electrostatics by softsimu on 2007-12-12 15:40:44 as **
  • Effective attraction interactions between like-charge macroions bound to binary fluid lipid membranes
    The Journal of Chemical Physics, Vol. 126, No. 12. (2007)
    by Xia Q Shi, Yu Q Ma
    posted to electrostatics membranes by softsimu on 2007-12-14 00:43:39 as **
  • Local molecular dynamics with coulombic interactions
    Phys Rev Lett, Vol. 93, No. 17. (2004)
    by J Rottler, AC Maggs
    posted to electrostatics by softsimu on 2007-12-12 15:37:26 as **
  • The Origin of Layer Structure Artifacts in Simulations of Liquid Water
    J. Chem. Theory Comput., Vol. 2, No. 1. (10 January 2006), pp. 1-11.
    by D van der Spoel, PJ van Maaren
    posted to artifacts electrostatics molecular-dynamics by softsimu on 2008-02-17 00:51:37 as **
  • Monte Carlo simulation of the electric double layer: Dielectric boundaries and the effects of induced charge
    Mol. Phys., Vol. 103, No. 21-23 SPEC. ISS.. (2005), pp. 2851-2861.
    by D Henderson, D Gillespie, T Nagy, D Boda
    posted to dielectrics electrostatics monte-carlo by softsimu on 2007-12-12 15:42:05 as **
  • Rigidification of Neutral Lipid Bilayers in the Presence of Salts
    Biophys. J., Vol. 93, No. 8. (15 October 2007), pp. 2688-2696.
    by Georg Pabst, Aden Hodzic, Janez Strancar, Sabine Danner, Michael Rappolt, Peter Laggner
    posted to electrostatics membranes by softsimu on 2007-12-14 00:53:47 as ** along with 1 person and 1 group sobolevnrm baker-group
  • Fast Algorithms for Classical Physics
    by Leslie Greengard
    posted to electrostatics by softsimu on 2007-12-21 07:21:34 as ** along with 1 person eyliu
  • ESPResSo--an extensible simulation package for research on soft matter systems
    Computer Physics Communications, Vol. 174, No. 9. (1 May 2006), pp. 704-727.
    by HJ Limbach, A Arnold, BA Mann, C Holm
    posted to dpd electrostatics espresso molecular-dynamics monte-carlo by softsimu on 2007-12-12 16:03:57 as ** along with 2 people RamuAnandakrishnan pawelp
  • Measured Depletion of Ions at the Biomembrane Interface
    J. Am. Chem. Soc., Vol. 127, No. 33. (24 August 2005), pp. 11546-11547.
    by HI Petrache, I Kimchi, D Harries, VA Parsegian
    posted to electrostatics membranes by softsimu on 2007-12-14 01:01:36 as **
  • Rapid calculation of two-dimensional Ewald summation
    Chem. Phys. Lett., Vol. 340, No. 1-2. (2001), pp. 157-164.
    by M Kawata, M Mikami
    posted to electrostatics p3m by softsimu on 2007-12-12 15:50:24 as **
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