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Tag elongation [41 articles]

Recent papers classified by the tag elongation.
  • Gene-specific recruitment of positive and negative elongation factors during stimulated transcription of the MKP-1 gene in neuroendocrine cells.
    Nucleic Acids Res, Vol. 35, No. 3. (2007), pp. 1007-1017.
    by T Fujita, S Ryser, S Tortola, I Piuz, W Schlegel
    posted to cdk9 cyct dsif elongation factor gene-specific mkp-1 negative nelf positive ptefb recruitment transcription by xico on 2007-06-06 17:00:52 as ** along with 1 group WetBiology
  • PPARgamma Recruits the P-TEFb Complex to Activate Transcription and Promote Adipogenesis.
    Mol Endocrinol (16 February 2006)
    by Irena Iankova, Rasmus K K Petersen, Jean-Sébastien S Annicotte, Carine Chavey, Jacob B B Hansen, Irina Kratchmarova, David Sarruf, Monsef Benkirane, Karsten Kristiansen, Lluis Fajas
    posted to adipogenesis cdk9 cyclint drb elongation nuclear p-tefb ppar receptor transcription by xico on 2006-03-06 23:34:15 as ** along with 1 group WetBiology
  • Exploring functional relationships between components of the gene expression machinery.
    Nat Struct Mol Biol, Vol. 12, No. 2. (February 2005), pp. 175-182.
    by T Burckin, R Nagel, Y Mandel-Gutfreund, L Shiue, TA Clark, JL Chong, TH Chang, S Squazzo, G Hartzog, M Ares
    posted to elongation expression gene machinery maturation mrna review splicing transcription by xico on 2007-06-06 16:28:43 as ** along with 2 people and 1 group balajis opheliav WetBiology
  • Regulation of transcript elongation through cooperative and ordered recruitment of cofactors
    J. Biol. Chem. (29 May 2007), M701420200.
    by Manish Sharma, Anuja A George, Badri N Singh, Naresh C Sahoo, Kanury V Rao
    posted to cofactor cofactors cooperative elongation mrna recruitment rnapii transcript by xico on 2007-06-04 22:40:54 as ** along with 1 person and 1 group epigenetics WetBiology
  • The RNA polymerase II CTD kinase Ctk1 functions in translation elongation.
    Genes Dev, Vol. 21, No. 11. (1 June 2007), pp. 1409-1421.
    by Susanne Röther, Katja Sträßer
    posted to ctd ctd-cdk ctk1 elongation ii kinase polymerase rna rnapii translation by xico on 2007-06-06 16:15:51 as ***** along with 1 group WetBiology
  • Controlling the elongation phase of transcription with P-TEFb.
    Mol Cell, Vol. 23, No. 3. (4 August 2006), pp. 297-305.
    by BM Peterlin, DH Price
    posted to dsif elongation factor nelf p-tefb phase review rnapii-ctd transcription by xico on 2007-03-13 21:42:06 as *** along with 1 group WetBiology
  • Cyclin Box Structure of the P-TEFb Subunit Cyclin T1 Derived from a Fusion Complex with EIAV Tat.
    J Mol Biol (10 May 2007)
    by Kanchan Anand, Antje Schulte, Koh Fujinaga, Klaus Scheffzek, Matthias Geyer
    posted to aids box cdk9 cyclin cyclint1 e1av elongation factor hiv p-tefb structure tat transcription by xico on 2007-06-04 20:39:58 as ** along with 1 group WetBiology
  • Analysis of polymerase II elongation complexes by native gel electrophoresis. Evidence for a novel carboxyl-terminal domain-mediated termination mechanism.
    J Biol Chem, Vol. 279, No. 22. (28 May 2004), pp. 23223-23228.
    by Z Zhang, CH Wu, DS Gilmour
    posted to complex ctd elongation polii termination transcription by xico on 2006-01-28 00:54:36 as *** along with 1 group WetBiology
  • The glucocorticoid receptor blocks P-TEFb recruitment by NFkappaB to effect promoter-specific transcriptional repression.
    Genes Dev, Vol. 19, No. 9. (1 May 2005), pp. 1116-1127.
    by HF Luecke, KR Yamamoto
    posted to cdk9 ctd-kinase cyct elongation glucocorticoid nfkappab p-tefb receptor repression transcription by xico on 2006-06-09 19:49:42 as **** along with 1 group WetBiology
  • Complete RNA polymerase II elongation complex structure and its interactions with NTP and TFIIS.
    Mol Cell, Vol. 16, No. 6. (22 December 2004), pp. 955-965.
    by H Kettenberger, KJ Armache, P Cramer
    posted to complex elongation polymerase rna sructure tfiis transcription by xico on 2005-12-26 22:34:31 as ** along with 1 group WetBiology
  • Interactions between fission yeast Cdk9, its cyclin partner Pch1, and mRNA capping enzyme Pct1 suggest an elongation checkpoint for mRNA quality control.
    J Biol Chem, Vol. 278, No. 9. (28 February 2003), pp. 7180-7188.
    by Y Pei, B Schwer, S Shuman
    posted to cdk9 checkpoint control cyclin elongation fission mrna pch1 pct1 quality spcdk9 transcription yeast by xico on 2006-02-05 00:33:39 as read along with 1 person and 1 group gloria WetBiology
  • A real-time view of the TAR:Tat:pTEFb complex at HIV-1 transcription sites
    Retrovirology, Vol. 4 (30 May 2007), 36.
    by Dorothee Molle, Paolo Maiuri, Stephanie Boireau, Edouard Bertrand, Anna Knezevich, Alessandro Marcello, Eugenia Basyuk
    posted to aids cdk9 cyclin cyct elongation hiv-1 ptefb real-time retrovirus t tar tat transcription by xico on 2007-06-06 16:34:47 as ** along with 1 group WetBiology
  • Biorheological views of endothelial cell responses to mechanical stimuli.
    Biorheology, Vol. 42, No. 6. (2005), pp. 421-441.
    by M Sato, T Ohashi
    posted to cytoskeleton elongation endothelial mechanics morphology physical rheology by tsjipko on 2007-05-04 10:48:36 as **
  • p38 Mitogen-Activated Protein Kinase Activation in Endothelial Cell Is Implicated in Cell Alignment and Elongation Induced by Fluid Shear Stress
    Endothelium, Vol. 13, No. 1. (February 2006), pp. 43-50.
    by Takayuki Kadohama, Nobuyuki Akasaka, Kengo Nishimura, Yuji Hoshino, Tadahiro Sasajima, Bauer Sumpio
    posted to alignment elongation endothelial p38 shear by tsjipko on 2006-09-18 08:42:21 as **
  • Role of p38 MAP kinase in endothelial cell alignment induced by fluid shear stress.
    Am J Physiol Heart Circ Physiol, Vol. 280, No. 1. (January 2001)
    by N Azuma, N Akasaka, H Kito, M Ikeda, V Gahtan, T Sasajima, BE Sumpio
    posted to cytoskeleton elongation endothelial p38 by tsjipko on 2006-08-24 13:53:27 as read
  • Directional shear flow and Rho activation prevent the endothelial cell apoptosis induced by micropatterned anisotropic geometry.
    Proc Natl Acad Sci U S A (17 January 2007)
    by Chia-Ching C Wu, Yi-Shuan S Li, Jason H H Haga, Roland Kaunas, Jeng-Jiann J Chiu, Fong-Chin C Su, Shunichi Usami, Shu Chien
    posted to rho mechanical endothelial elongation apoptosis by tsjipko on 2007-01-22 08:58:18 as *****
  • Arterial shear stress regulates endothelial cell-directed migration, polarity, and morphology in confluent monolayers
    Am J Physiol Heart Circ Physiol, Vol. 293, No. 3. (1 September 2007), pp. H1937-1946.
    by Michael B Simmers, Andrew W Pryor, Brett R Blackman
    posted to algorithm elongation endothelial matlab method migration polarization shape shear by tsjipko on 2007-11-02 10:01:47 as *
  • BRCA1 cooperates with NUFIP and P-TEFb to activate transcription by RNA polymerase II.
    Oncogene, Vol. 23, No. 31. (8 July 2004), pp. 5316-5329.
    by P Cabart, HK Chew, S Murphy
    posted to brca1 elongation p-tefb transcription by skoch3 on 2008-04-16 08:36:51 as **** along with 1 group Koch_Lab
  • Elongation of the Kcnq1ot1 transcript is required for genomic imprinting of neighboring genes.
    Genes Dev, Vol. 20, No. 10. (15 May 2006), pp. 1268-1282.
    by D Mancini-Dinardo, SJ Steele, JM Levorse, RS Ingram, SM Tilghman
    posted to elongation imprinting kcnq1ot1 rna by sebastien_vigneau on 2007-10-19 13:20:23 as read
  • RNA polymerase is poised for activation across the genome
    Nature Genetics, Vol. 39, No. 12. (11 November 2007), pp. 1507-1511.
    by Ginger W Muse, Daniel A Gilchrist, Sergei Nechaev, Ruchir Shah, Joel S Parker, Sherry F Grissom, Julia Zeitlinger, Karen Adelman
    posted to drosophila elongation expression gene polymerase rna stalling transcription by rschulz on 2007-12-18 10:27:29 as ** along with 4 people and 1 group margaritis skoch3 caseybrown mikaelhuss Koch_Lab
  • Stalled polymerases and transcriptional regulation
    Nature Genetics, Vol. 39, No. 12., pp. 1421-1422.
    by John W Tamkun
    posted to elongation expression gene polymerase rna stalling transcription by rschulz on 2007-12-18 10:29:37 as read along with 4 people cassj dchughes cjeans emptyhb
  • Study of the Cosmic Ray Composition above 0.4 EeV using the Longitudinal Profiles of Showers observed at the Pierre Auger Observatory
    (11 Jun 2007)
    by Michael Unger, Pierre A Collaboration
    posted to auger composition elongation icrc07 by pedjor on 2008-08-05 11:27:55 as **
  • Structural basis for transcription elongation by bacterial RNA polymerase
    Nature (20 June 2007)
    by Dmitry G Vassylyev, Marina N Vassylyeva, Anna Perederina, Tahir H Tahirov, Irina Artsimovitch
    posted to elongation rnap structure transcription by margaritis on 2007-07-18 11:29:56 as read along with 2 people zwang Jporci
  • Retention of transcription initiation factor sigma70 in transcription elongation: single-molecule analysis.
    Mol Cell, Vol. 20, No. 3. (11 November 2005), pp. 347-356.
    by AN Kapanidis, E Margeat, TA Laurence, S Doose, SO Ho, J Mukhopadhyay, E Kortkhonjia, V Mekler, RH Ebright, S Weiss
    posted to elongation fret initiation transcritpion by margaritis on 2008-08-19 18:28:57 as ** along with 1 person yusdi
  • A chromatin landmark and transcription initiation at most promoters in human cells.
    Cell, Vol. 130, No. 1. (13 July 2007), pp. 77-88.
    by MG Guenther, SS Levine, LA Boyer, R Jaenisch, RA Young
    posted to elongation initiation regulation transcription by margaritis on 2008-03-19 18:20:03 as ** along with 1 person inesdesantiago
  • Poised Polymerases: On Your Mark...Get Set...Go!
    Molecular Cell, Vol. 30, No. 1. (11 April 2008), pp. 7-10.
    by David H Price
    posted to elongation regulation review transcription by margaritis on 2008-04-16 15:33:22 as **
  • RNA Polymerase Elongation Factors
    Annual Review of Microbiology, Vol. 62, No. 1. (2008)
    by Jeffrey W Roberts, Smita Shankar, Joshua J Filter
    posted to elongation regulation review transcription by margaritis on 2008-08-26 16:13:40 as **
  • Structural basis for substrate loading in bacterial RNA polymerase
    Nature (20 June 2007)
    by Dmitry G Vassylyev, Marina N Vassylyeva, Jinwei Zhang, Murali Palangat, Irina Artsimovitch, Robert Landick
    posted to elongation rnap structure transcription by margaritis on 2007-07-18 11:30:09 as ** along with 2 people zwang Jporci
  • RNA polymerase stalling at developmental control genes in the Drosophila melanogaster embryo
    Nature Genetics, Vol. 39, No. 12. (11 November 2007), pp. 1512-1516.
    by Julia Zeitlinger, Alexander Stark, Manolis Kellis, Joung-Woo Hong, Sergei Nechaev, Karen Adelman, Michael Levine, Richard A Young
    posted to elongation pauses rnap by margaritis on 2008-03-03 12:28:16 as read along with 5 people Stew rschulz caseybrown mikaelhuss inesdesantiago
  • The transcriptional cycle of HIV-1 in real-time and live cells.
    J Cell Biol, Vol. 179, No. 2. (22 October 2007), pp. 291-304.
    by S Boireau, P Maiuri, E Basyuk, M de la Mata, A Knezevich, B Pradet-Balade, V Bäcker, A Kornblihtt, A Marcello, E Bertrand
    posted to elongation experiment pauses transcription by margaritis on 2008-07-10 17:01:41 as ** along with 2 people sebastien_vigneau RedmondSmyth
  • Direct Versus Limited-step Reconstitution Reveals Key Features of an RNA Hairpin-stabilized Paused Transcription Complex
    J. Biol. Chem., Vol. 282, No. 26. (29 June 2007), pp. 19020-19028.
    by Scotty Kyzer, Kook S Ha, Robert Landick, Murali Palangat
    posted to elongation hairpin-stabilised pause by margaritis on 2007-08-10 12:47:35 as read
  • The transition from transcriptional initiation to elongation
    Current Opinion in Genetics & Development, Vol. 18, No. 2. (April 2008), pp. 130-136.
    by J Wade, K Struhl
    posted to rna-polii review elongation chip-chip by mapplab on 2008-10-03 20:09:13 as **
  • Elastic-plastic indentation creep of glassy poly(methyl methacrylate) and polystyrene: characterization using uniaxial compression and indentation tests
    Journal of Physics D: Applied Physics, Vol. 32, No. 22. (1999), pp. 2923-2932.
    by P Berthoud, C G'sell, JM Hiver
    posted to elongation glassy polymethylmethacrylate polystyrene rheology by kaz229 on 2007-06-15 10:49:51 as **
  • Elongational viscosity of monodisperse and bidisperse polystyrene melts
    Journal of Rheology, Vol. 50, No. 4. (2006), pp. 453-476.
    by Jens K Nielsen, Henrik K Rasmussen, Ole Hassager, Gareth H Mckinley
    posted to binary-blend elongation polystyrene rheology by kaz229 on 2007-07-02 11:55:37 as ** along with 1 person rheology_shiu
  • The Transition between Transcriptional Initiation and Elongation in E. coli Is Highly Variable and Often Rate Limiting
    Molecular Cell, Vol. 24, No. 5. (8 December 2006), pp. 747-757.
    by Nikos B Reppas, Joseph T Wade, George[no-Break Church, Kevin Struhl
    posted to e_coli elongation important initiation transcription by aswin on 2006-12-18 14:37:52 as ***** along with 1 person Retchless
  • Kinetic analysis of beta-amyloid fibril elongation
    Analytical Biochemistry, Vol. 328, No. 1. (1 May 2004), pp. 67-75.
    by Michelle J Cannon, Angela D Williams, Ronald Wetzel, David G Myszka
    posted to amyloid beta-amyloid biacore elongation fibrillation spr by anyscientist on 2006-09-11 12:50:06 as **
  • Effects of NO-Synthase Inhibitors on Development of Sea Urchin Embryos
    Journal of Evolutionary Biochemistry and Physiology, Vol. 40, No. 3. (1 May 2004), pp. 282-287.
    by MN Semenova, ND Ozernyuk
    posted to arms development ectoderm elongation no pmc skeletogenesis sm30 sm50 spicule urchin by adamsdi on 2007-10-22 17:59:36 as **
  • Suspensions of monodisperse spheres in polymer melts: particle size effects in extensional flow
    Rheologica Acta, Vol. 42, No. 1. (January 2003), pp. 184-190.
    by Jean-François Le Meins, Paula Moldenaers, Jan Mewis
    posted to elongation hydrodynamic_interaction suspension by 6rheology on 2008-06-26 10:56:20 as **
  • Direct numerical simulations of hard particle suspensions in planar elongational flow
    Journal of Non-Newtonian Fluid Mechanics, Vol. 136, No. 2-3. (15 July 2006), pp. 167-178.
    by Wook R Hwang, Martien A Hulsen
    posted to elongation suspension by 6rheology on 2008-06-26 10:59:14 as ** along with 1 person elorenz
  • Flexible Polymer Chains in Elongational Flow: Theory and Experiment
    (02 July 1999)
    posted to connffessit elongation by 6rheology on 2008-08-30 06:31:02 as **
  • Multiaxial elongations of polyisobutylene and the predictions of several network theories
    Colloid & Polymer Science, Vol. 264, No. 10. (1 October 1986), pp. 829-846.
    by A Demarmels, J Meissner
    posted to rheology meissner elongation by 6rheology on 2008-09-09 10:05:12 as **
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