Tag enrichment-analysis [13 articles] Export

Recent papers classified by the tag enrichment-analysis.

	Microarray data mining using Bioconductor packages. [My Copy] BMC proceedings, Vol. 3 Suppl 4 (2009) by Haisheng Nie, Pieter Bt B. Neerincx, Jan van der Poel, et al.Francesco Ferrari, Silvio Bicciato, Jack Am A. Leunissen, Martien Am A. Groenen posted to orthologous microarray human go expression enrichment-analysis differential chromosome-wide chromosomal-expression chicken analysis by bertelsen on 2009-09-30 17:28:16 as along with 1 person guhjy
	Analyzing gene expression data in terms of gene sets: methodological issues [My Copy] Bioinformatics, Vol. 23, No. 8. (15 April 2007), pp. 980-987. by Jelle J. Goeman, Peter Buhlmann posted to test statistical set methodology gene-expression gene enrichment-analysis by bertelsen on 2009-09-28 15:26:19 as along with 18 people and 3 groups zufar srp33 jperkins ptrobajo VGreiff tonamswish ipark-kaist aramesh2 ydhwang shikin raiyar ghattem jfr ealloza shigepong heliopais guhjy diging_data SIMR bioinformatics BioinfoCIPF BTS-PT-AS-CS
	Ontological analysis of gene expression data: current tools, limitations, and open problems [My Copy] Bioinformatics, Vol. 21, No. 18. (15 September 2005), pp. 3587-3595. by Purvesh Khatri, Sorin Draghici posted to tool review ontologies microarray gene-expression enrichment-analysis comparison analysis by bertelsen on 2009-09-27 20:19:00 as along with 17 people and 1 group jperkins ipark-kaist gjuggler isakemal Stew shikin diamantis Cortel dragonrez macavity1g Garamonfok sgoetz heliopais kristen yggdrasil ellakat marck Bioinformatics - CRUK
	Pathways to the analysis of microarray data. [My Copy] Trends in biotechnology, Vol. 23, No. 8. (August 2005), pp. 429-435. by R. Keira Curtis, Matej Oresic, Antonio Vidal-Puig posted to tool review pathways pathway-analysis microarray integration gene-expression enrichment-analysis analysis by bertelsen on 2009-09-27 20:16:12 as along with 11 people and 2 groups thomaskelder udivi AlexanderPico jfr saman_vp snuppepuppan textoris Ayest tardigrade ealloza heliopais ConklinLab BioinfoCIPF
	Methods for interpreting lists of affected genes obtained in a DNA microarray experiment. [My Copy] BMC proceedings, Vol. 3 Suppl 4 (2009) by Jakob Hedegaard, Cristina Arce, Silvio Bicciato, et al.Agnès Bonnet, Bart Buitenhuis, Melania Collado-Romero, Lene N. Conley, Magali Sancristobal, Francesco Ferrari, Juan J. Garrido, Martien Am A. Groenen, Henrik Hornshøj, Ina Hulsegge, Li Jiang, Angeles Jiménez-Marín, Arun Kommadath, Sandrine Lagarrigue, Jack Am A. Leunissen, Laurence Liaubet, Pieter Bt B. Neerincx, Haisheng Nie, Jan van der Poel, Dennis Prickett, María Ramirez-Boo, Johanna Mj M. Rebel, Christèle Robert-Granié, Axel Skarman, Mari A. Smits, Peter Sørensen, Gwenola Tosser-Klopp, Michael Watson posted to microarray interpretation gene-expression enrichment-analysis biology annotation by bertelsen on 2009-09-27 19:53:52 as
	GATHER: a systems approach to interpreting genomic signatures. [My Copy] Bioinformatics (Oxford, England), Vol. 22, No. 23. (1 December 2006), pp. 2926-2933. by J. T. Chang, J. R. Nevins posted to enrichment-analysis gene-function genomics interpretation systems-biology by bertelsen on 2009-06-03 22:58:15 as along with 3 people guhjy jfr minostro
	The gene ontology categorizer. [My Copy] Bioinformatics, Vol. 20 Suppl 1 (4 August 2004) by C. A. Joslyn, S. M. Mniszewski, A. Fulmer, G. Heaton posted to enrichment-analysis gene-expression go ontology by bertelsen on 2009-05-05 11:33:22 as along with 2 people ziquje cmzmasek
	Meta-analysis and gene set enrichment relative to er status reveal elevated activity of MYC and E2F in the "basal" breast cancer subgroup. [My Copy] PloS one, Vol. 4, No. 3. (2009) by M. C. Alles, M. Gardiner-Garden, D. J. Nott, et al.Y. Wang, J. A. Foekens, R. L. Sutherland, E. A. Musgrove, C. J. Ormandy posted to analysis enrichment-analysis by bertelsen on 2009-04-27 11:45:24 as along with 4 people zufar jfr shikin daforerog
	Bioinformatics enrichment tools: paths toward the comprehensive functional analysis of large gene lists [My Copy] Nucl. Acids Res., Vol. 37, No. 1. (1 January 2009), pp. 1-13. by Da W. Huang, Brad T. Sherman, Richard A. Lempicki posted to comparison enrichment-analysis review summary survey tool by bertelsen on 2009-03-12 15:26:42 as along with 41 people and 2 groups ipark-kaist giovenko lwaldron jcaddy antonkratz Zephyrus shikin yaredo tonamswish ddunbar robfsouza Keywan daforerog ptrobajo rdiaz Stew inesdesantiago heliopais AlexanderPico aviad_work ekotelnikova frohike aramesh2 jfr zufar ilyashl dolchan paszkows lptolik thomaskelder AbnerCYH neils tmmurali ealloza barriot druvus renatomilani pengchy phoenixzxl guhjy sjcockell Bioinformatics - CRUK ConklinLab
	A Novel Signaling Pathway Impact Analysis (SPIA) [My Copy] Bioinformatics (5 November 2008), btn577. by Adi L. Tarca, Sorin Draghici, Purvesh Khatri, et al.Sonia S. Hassan, Pooja Mittal, Jung-Sun Kim, Chong J. Kim, Juan P. Kusanovic, Roberto Romero posted to analysis enrichment-analysis functional-genomics gene-expression impact pathway signal by bertelsen on 2009-03-12 14:59:45 as along with 8 people and 1 group ipark-kaist jfr heliopais lptolik AlexanderPico thomaskelder guhjy renatomilani ConklinLab
	ProbCD: enrichment analysis accounting for categorization uncertainty [My Copy] BMC Bioinformatics, Vol. 8, No. 1. (2007) by Ricardo Vencio, Ilya Shmulevich posted to annotation enrichment-analysis go microarray ontology probabilistic software uncertainty by bertelsen on 2009-03-12 14:23:56 as along with 4 people and 1 group druvus sobolevnrm heliopais barriot baker-group
	BayGO: Bayesian analysis of ontology term enrichment in microarray data. [My Copy] BMC Bioinformatics, Vol. 7 (2006) by R. Z. Vêncio, T. Koide, S. L. Gomes, C. A. Pereira posted to analysis bayesian enrichment-analysis microarray ontology r software by bertelsen on 2009-03-12 14:18:52 as along with 2 people jfr cmzmasek
	Gene set enrichment analysis: A knowledge-based approach for interpreting genome-wide expression profiles [My Copy] Proceedings of the National Academy of Sciences of the United States of America, Vol. 102, No. 43. (25 October 2005), pp. 15545-15550. by Aravind Subramanian, Pablo Tamayo, Vamsi K. Mootha, et al.Sayan Mukherjee, Benjamin L. Ebert, Michael A. Gillette, Amanda Paulovich, Scott L. Pomeroy, Todd R. Golub, Eric S. Lander, Jill P. Mesirov posted to enrichment-analysis expression gene-expression knowledge-based profiles by bertelsen on 2009-03-10 12:17:08 as along with 45 people and 4 groups gbloeb miskar giovenko greg dolchan pattersonee mhamidi jperkins zufar ptrobajo antonkratz yaredo tmmurali VGreiff daforerog paszkows ipark-kaist ajbattle jessopher askrajiv idonaldson ihpark chrisamiller dragonrez jfr balajis maryee xwbcn hpiwowar aviad_work ealloza jdiggans jeremymiller frohike hawkeyehammer schuylrp natstreet heliopais shikin waghsk roys ellakat srp33 sgoetz AbnerCYH Bioinformatics BioinfoCIPF GeschwindLab Indigene

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gene-expression	14
analysis	11
microarray	10
ontology	6
review	6
tool	6
go	5
comparison	4
software	4
annotation	3
expression	3
gene	3
methodology	3
set	3
statistical	3
test	3
bayesian	2
functional-genomics	2
impact	2
integration	2
interpretation	2
knowledge-based	2
ontologies	2
pathway	2
pathway-analysis	2
pathways	2
probabilistic	2
profiles	2
r	2
signal	2
summary	2
survey	2
uncertainty	2
biology	1
chicken	1
chromosomal-expression	1
chromosome-wide	1
differential	1
gene-function	1
genomics	1
human	1
orthologous	1
systems-biology	1

Tag enrichment-analysis [13 articles] Export

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