Tag eukaryote [111 articles] Export

Recent papers classified by the tag eukaryote.

	Ubiquitous internal gene duplication and intron creation in eukaryotes [My Copy] Proceedings of the National Academy of Sciences (19 November 2009) by Xiang Gao, Michael Lynch posted to intron evolution eukaryote by jjray on 2009-11-20 16:11:42 as
	Comparative genomics and structural biology of the molecular innovations of eukaryotes [My Copy] Current Opinion in Structural Biology In Nucleic acids/Sequences and topology - Anna Marie Pyle and Jonathan Widom/Nick V Grishin and Sarah A Teichmann, Vol. 16, No. 3. (Jun 2006), pp. 409-419. by L. Aravind, L. Iyer, E. Koonin posted to protein ph fold evolution eukaryote domain architecture by robfsouza on 2009-11-19 20:53:54 as
	Quantitative proteomic analysis of single pancreatic islets [My Copy] Proceedings of the National Academy of Sciences, Vol. 106, No. 45. (10 November 2009), pp. 18902-18907. by Leonie F. Waanders, Karolina Chwalek, Mara Monetti, Chanchal Kumar, Eckhard Lammert, Matthias Mann posted to proteome islets_of_langerhans gene_expression eukaryote by jjray on 2009-11-10 21:00:51 as
	5-Methylcytosine in eukaryotic DNA. [My Copy] Science (New York, N.Y.), Vol. 212, No. 4501. (19 June 1981), pp. 1350-1357. by M. Ehrlich, R. Y. Wang posted to eukaryote epigenetics dna-methylation cpg classic by aprickett on 2009-11-05 14:54:20 as along with 1 person rschulz
	Cotranscriptionality: The Transcription Elongation Complex as a Nexus for Nuclear Transactions [My Copy] Vol. 36, No. 2. (23 October 2009), pp. 178-191. by Roberto Perales, David Bentley posted to transcription review nucleus gene_expression eukaryote by jjray on 2009-10-22 21:50:12 as
	Comprehensive Multigene Phylogenies of Excavate Protists Reveal the Evolutionary Positions of "Primitive" Eukaryotes [My Copy] Mol Biol Evol, Vol. 23, No. 3. (1 Mar 2006), pp. 615-625. by Alastair G. B. Simpson, Yuji Inagaki, Andrew J. Roger posted to protozoa phylogeny phylogenomics evolution eukaryote by robfsouza on 2009-10-17 02:24:53 as
	Eukaryote-specific Domains in Translation Initiation Factors: Implications for Translation Regulation and Evolution of the Translation System [My Copy] Genome Research, Vol. 10, No. 8. (1 Aug 2000), pp. 1172-1184. by L. Aravind, Eugene V. Koonin posted to translation regulation inactive factor evolution eukaryote enzyme aravind by robfsouza on 2009-09-18 23:20:10 as
	Comparative genomics, evolution and origins of the nuclear envelope and nuclear pore complex. [My Copy] Cell Cycle, Vol. 3, No. 12. (Dec 2004), pp. 1612-1637. by Ben J. Mans, Vivek Anantharaman, L. Aravind, Eugene V. Koonin posted to nuclear_pore_complex inactive genomic_analysis evolution eukaryote enzyme comparative chromosome chromatin aravind by robfsouza on 2009-09-13 02:00:31 as
	Myosin domain evolution and the primary divergence of eukaryotes [My Copy] Nature, Vol. 436, No. 7054. (25 August 2005), pp. 1113-1118. by Thomas A. Richards, Thomas Cavalier-Smith posted to evolution eukaryote by tomhebbron on 2009-09-03 20:37:36 as along with 2 people and 1 group jdelcampo fhsantanna Microbial-Ecology
	Learning how to live together: genomic insights into prokaryote-animal symbioses. [My Copy] Nature reviews. Genetics, Vol. 9, No. 3. (March 2008), pp. 218-229. by Andrés Moya, Juli Peretó, Rosario Gil, Amparo Latorre posted to symbiosis prokaryote eukaryote by tomhebbron on 2009-09-03 14:09:15 as along with 1 person operon
	Significant conservation of synthetic lethal genetic interaction networks between distantly related eukaryotes [My Copy] Proceedings of the National Academy of Sciences, Vol. 105, No. 43. (28 October 2008), pp. 16653-16658. by Scott J. Dixon, Yaroslav Fedyshyn, Judice L. Y. Koh, et al.T. S. Keshava Prasad, Charly Chahwan, Gordon Chua, Kiana Toufighi, Anastasija Baryshnikova, Jacqueline Hayles, Kwang-Lae Hoe, Dong-Uk Kim, Han-Oh Park, Chad L. Myers, Akhilesh Pandey, Daniel Durocher, Brenda J. Andrews, Charles Boone posted to yeast synthetic_lethal network_genetic genetic_load eukaryote by biomcgary on 2009-09-02 23:17:03 as along with 4 people sp20040 robfsouza raiyar bpcusack
	Average Gene Length Is Highly Conserved in Prokaryotes and Eukaryotes and Diverges Only Between the Two Kingdoms [My Copy] Mol Biol Evol, Vol. 23, No. 6. (1 June 2006), pp. 1107-1108. by Lin Xu, Hong Chen, Xiaohua Hu, Rongmei Zhang, Ze Zhang, Z. W. Luo posted to prokaryote genetics evolution eukaryote by jjray on 2009-08-31 18:27:51 as along with 1 person robfsouza
	Morphogenesis by coupled regulatory networks: Reliable control of positional information and proportion regulation [My Copy] Journal of Theoretical Biology (25 Aug 2009) by Thimo Rohlf, Stefan Bornholdt posted to spatial pattern_formation multiscale gene_regulation eukaryote development agent_based by jjray on 2009-08-26 15:39:18 as along with 2 people sigoldberg1 apocapoc
	Evaluating hypotheses for the origin of eukaryotes. [My Copy] BioEssays : news and reviews in molecular, cellular and developmental biology, Vol. 29, No. 1. (January 2007), pp. 74-84. by Anthony M. Poole, David Penny posted to origin evolution eukaryote by tomhebbron on 2009-08-21 09:20:42 as
	The Emergence of Predators in Early Life: There was No Garden of Eden [My Copy] PLoS ONE, Vol. 4, No. 6. (3 June 2009), e5507. by Silvester de Nooijer, Barbara R. Holland, David Penny posted to predation origins evolution eukaryote emergence by tomhebbron on 2009-08-20 15:46:52 as
	Comparative embryology without a microscope: using genomic approaches to understand the evolution of development [My Copy] Journal of Biology, Vol. 8, No. 7. (2009), 65. by David Garfield, Gregory Wray posted to eukaryote genome evolution evodevo embryology development comparative by robfsouza on 2009-08-12 21:31:02 as
	On the Origin of Eukaryotes [My Copy] Science, Vol. 325, No. 5941. (7 August 2009), pp. 666-668. by Carl Zimmer posted to review prokaryote mitochondrium evolution eukaryote archaea by rschulz on 2009-08-12 09:50:28 as along with 2 people dinnes christinewells
	GEFs and GAPs: Critical Elements in the Control of Small G Proteins [My Copy] Cell, Vol. 129, No. 5. (01 Jun 2007), pp. 865-877. by J. Bos, H. Rehmann, A. Wittinghofer posted to g-protein eukaryote transduction signaling signal regulation receptor protein ntpase cell by robfsouza on 2009-08-11 20:46:44 as along with 2 people and 2 groups dchughes laurabailey G4ID Genetics-of-Gambling
	Horizontal gene transfer of an entire metabolic pathway between a eukaryotic alga and its DNA virus [My Copy] Genome Research, Vol. 19, No. 8. (August 2009), pp. 1441-1449. by Adam Monier, António Pagarete, Colomban de Vargas, et al.Michael J. Allen, Betsy Read, Jean-Michel Claverie, Hiroyuki Ogata posted to alga eukaryote gene-transfer virus by djkt to the group iSEEM on 2009-08-03 19:44:50 as along with 2 people and 1 group gwallau sharpton LabDros
	Attenuation of transcriptional bursting in mRNA transport [My Copy] (23 Jul 2009) by Li-Ping Xiong, Yu-Qiang Ma, Lei-Han Tang posted to biochemistry eukaryote noise spatial transcriptional_burst by jjray on 2009-07-27 16:43:53 as
	Cohesive versus Flexible Evolution of Functional Modules in Eukaryotes [My Copy] PLoS Comput Biol, Vol. 5, No. 1. (30 January 2009), e1000276. by Like Fokkens, Berend Snel posted to co-evolution dispensability eukaryote evolution modularity module network phylogenetic_profiling phylogenomics protein_complex by biomcgary on 2009-07-21 20:00:25 as along with 2 people saket grahamc
	Did DNA replication evolve twice independently? [My Copy] Nucl. Acids Res., Vol. 27, No. 17. (1 Sep 1999), pp. 3389-3401. by D. D. Leipe, L. Aravind, E. V. Koonin posted to replication prokaryotes polymerase origin inactive evolution eukaryote enzyme dna aravind by robfsouza on 2009-07-21 00:43:49 as along with 1 person venancio
	Origin and evolution of the archaeo-eukaryotic primase superfamily and related palm-domain proteins: structural insights and new members [My Copy] Nucl. Acids Res., Vol. 33, No. 12. (15 Jul 2005), pp. 3875-3896. by Lakshminarayan M. Iyer, Eugene V. Koonin, Detlef D. Leipe, L. Aravind posted to virus transcription superfamily primase inactive evolution eukaryote enzyme dna binding archaea aravind by robfsouza on 2009-07-18 02:41:07 as
	Analysis of Rare Genomic Changes Does Not Support the Unikont-Bikont Phylogeny and Suggests Cyanobacterial Symbiosis as the Point of Primary Radiation of Eukaryotes [My Copy] Genome Biol Evol, Vol. 2009, No. 0. (22 June 2009), pp. 99-113. by Igor B. Rogozin, Malay K. Basu, Miklos Csuros, Eugene V. Koonin posted to deep divergence eukaryote phylogeny by sriesenfeld on 2009-07-16 20:00:36 as
	Functional Evolution of the Yeast Protein Interaction Network [My Copy] Mol Biol Evol, Vol. 21, No. 7. (1 July 2004), pp. 1171-1176. by Victor Kunin, Jose B. Pereira-Leal, Christos A. Ouzounis posted to connectivity eukaryote fungi network network_evolution protein-protein_interaction yeast by biomcgary on 2009-07-09 21:35:19 as along with 1 person studentx
	Transposable elements and the evolution of regulatory networks [My Copy] Nat Rev Genet, Vol. 9, No. 5. (27 May 2008), pp. 397-405. by Cedric Feschotte posted to eukaryote biological elements evolution genome mobile network regulation transcription transposon by robfsouza on 2009-07-01 21:35:52 as along with 12 people and 1 group fhalbrit balicea gwallau djkt bootsy idonaldson cmzmasek smbe2008 eskay roys pradiptaray timflutre BergmanLab
	The conservation and evolutionary modularity of metabolism [My Copy] Genome Biology, Vol. 10, No. 6. (12 June 2009), R63. by Jose P. Alvarez, Chris Sanford, John Parkinson posted to co-conservation enzyme eukaryote evolution kegg metabolism modularity network secondary_metabolism by biomcgary on 2009-06-27 00:18:39 as along with 9 people and 1 group venancio carlk adampah bdessailly barriot michaelbarton Winzer tomhebbron grahamc Orengo Group Journal Picks
	BEN: a novel domain in chromatin factors and DNA viral proteins [My Copy] Bioinformatics, Vol. 24, No. 4. (15 Feb 2008), pp. 458-461. by Saraswathi Abhiman, Lakshminarayan M. Iyer, L. Aravind posted to eukaryote aravind architecture binding chromatin dna domain duplication virus by robfsouza on 2009-06-19 16:37:41 as along with 1 person mclarenv
	Global networks of functional coupling in eukaryotes from comprehensive data integration. [My Copy] Genome research, Vol. 19, No. 6. (25 June 2009), pp. 1107-1116. by Andrey Alexeyenko, Erik L. Sonnhammer posted to eukaryote functional integration network by ptrobajo on 2009-06-07 22:17:14 as along with 7 people and 1 group phoenixzxl kshameer rdiaz guhjy provero roys grahamc ParkinsonLab_at_MaRS
	A bistable genetic switch which does not require high co-operativity at the promoter: a two-timescale model for the PU.1-GATA-1 interaction [My Copy] Math Med Biol, Vol. 26, No. 2. (1 June 2009), pp. 117-132. by Pavol Bokes, John R. King, Matthew Loose posted to bistability cooperativity eukaryote gene_regulation mathematical_model promoter stem_cell by jjray on 2009-06-02 16:56:20 as
	Non-genetic origins of cell-to-cell variability in TRAIL-induced apoptosis. [My Copy] Nature, Vol. 459, No. 7245. (21 May 2009), pp. 428-432. by Sabrina L. Spencer, Suzanne Gaudet, John G. Albeck, John M. Burke, Peter K. Sorger posted to apoptosis eukaryote phenotypic_heterogeneity signaling stochastic by jjray on 2009-05-25 16:24:26 as along with 8 people gabrieljoelmitchell fenghezi dswan leliavski gbloeb absterga brianb songpku
	A Functional Role for Transposases in a Large Eukaryotic Genome [My Copy] Science, Vol. 324, No. 5929. (15 May 2009), pp. 935-938. by Mariusz Nowacki, Brian P. Higgins, Genevieve M. Maquilan, Estienne C. Swart, Thomas G. Doak, Laura F. Landweber posted to eukaryote genome transposase by mhiromi on 2009-05-21 09:29:57 as along with 8 people and 1 group operon GustavoLacerda orzenil gwallau gdb yves_cite leliavski stajich Mycology
	The universal distribution of evolutionary rates of genes and distinct characteristics of eukaryotic genes of different apparent ages [My Copy] Proceedings of the National Academy of Sciences (7 April 2009) by Yuri I. Wolf, Pavel S. Novichkov, Georgy P. Karev, Eugene V. Koonin, David J. Lipman posted to distribution eukaryote evolution mathematical_model rate by jjray on 2009-05-05 21:44:37 as along with 4 people and 1 group RamuAnandakrishnan deanmalmgren gjuggler rvosa FAB-lab
	Cardiolipin Membrane Domains in Prokaryotes and Eukaryotes [My Copy] Biochimica et Biophysica Acta (BBA) - Biomembranes (14 April 2009) by Eugenia Mileykovskaya, William Dowhan posted to cardiolipin domains eukaryote membrane mileyk09pdf prokyryote by paulschlesinger on 2009-04-17 01:32:25 as
	The transferome of metabolic genes explored: analysis of the horizontal transfer of enzyme encoding genes in unicellular eukaryotes. [My Copy] Genome biology, Vol. 10, No. 4. (15 April 2009), R36. by John W. Whitaker, Glenn A. McConkey, David R. Westhead posted to enzyme eukaryote evolution horizontal_gene_transfer metabolism by biomcgary on 2009-04-15 20:17:22 as along with 6 people and 1 group barriot johnwhitaker michaelbarton Thaverkamp cmzmasek neils Microbial-Ecology
	Chromatin recruitment of DNA repair proteins: lessons from the fanconi anemia and double-strand break repair pathways. [My Copy] Molecular cell, Vol. 32, No. 3. (7 November 2008), pp. 306-312. by M. A. Cohn, A. D. D'Andrea posted to eukaryote repair by coela on 2009-04-06 11:33:57 as
	Intrinsic variability of gene expression encoded in nucleosome positioning sequences. [My Copy] Nature genetics (1 March 2009) by Jung Kyoon K. Choi, Young-Joon J. Kim posted to eukaryote gene_regulation nucleosome promoter by jjray on 2009-03-27 21:34:13 as along with 10 people hagechouchin443 TRHvidsten athma siebert absterga shikin inesdesantiago fenghezi djkt provero
	Functions of bifans in context of multiple regulatory motifs in signaling networks. [My Copy] Biophysical journal, Vol. 94, No. 7. (1 April 2008), pp. 2566-2579. by A. Lipshtat, S. P. Purushothaman, R. Iyengar, A. Ma'ayan posted to eukaryote network network_motifs signaling by jjray on 2009-03-25 02:48:30 as
	Predation and eukaryote cell origins: A coevolutionary perspective [My Copy] The International Journal of Biochemistry & Cell Biology, Vol. 41, No. 2. (February 2009), pp. 307-322. by T. Cavalier-Smith posted to eukaryote evolution origin by tomhebbron on 2009-03-24 12:18:18 as along with 1 person and 1 group Zephyrus R.E.A.D
	Choose your partners: dimerization in eukaryotic transcription factors. [My Copy] Trends in biochemical sciences, Vol. 33, No. 5. (May 2008), pp. 220-229. by Grigoris D. Amoutzias, David L. Robertson, Yves Van de Peer, Stephen G. Oliver posted to eukaryote network tf by druvus on 2009-03-04 09:36:12 as along with 1 person guhjy
	Multistable and multistep dynamics in neutrophil differentiation [My Copy] BMC Cell Biology, Vol. 7, No. 1. (2006) by Hannah Chang, Philmo Oh, Donald Ingber, Sui Huang posted to biophysics bistability development dynamical_system eukaryote gene_regulation network neutrophil by jjray on 2009-03-03 17:02:51 as along with 3 people balabu mikaelhuss john_ardelius
	Cell fates as high-dimensional attractor states of a complex gene regulatory network. [My Copy] Physical review letters, Vol. 94, No. 12. (1 April 2005) by S. Huang, G. Eichler, Y. Bar-Yam, D. E. Ingber posted to biophysics bistability development dynamical_system eukaryote gene_regulation network by jjray on 2009-03-03 17:00:26 as along with 1 person balabu
	Homologous recombination in DNA repair and DNA damage tolerance. [My Copy] Cell Res (1 January 2008) by Xuan Li, Wolf-Dietrich D. Heyer posted to eukaryote recombination repair by cambray on 2009-02-18 16:31:34 as along with 4 people friveroll TOchi dbikard Petersarkies
	Antigenic variation in Trypanosoma brucei: joining the DOTs. [My Copy] PLoS biology, Vol. 6, No. 7. (29 July 2008) by C. Stockdale, M. R. Swiderski, J. D. Barry, R. McCulloch posted to eukaryote gene_conversion regulation by cambray on 2009-02-03 09:10:41 as
	Trypanosoma brucei homologous recombination is dependent on substrate length and homology, though displays a differential dependence on mismatch repair as substrate length decreases [My Copy] Nucl. Acids Res., Vol. 35, No. 10. (11 May 2007), pp. 3478-3493. by Rebecca L. Barnes, Richard Mcculloch posted to contingency_loci eukaryote gene_conversion recombination repair by cambray on 2009-02-01 19:25:33 as
	Switching trypanosome coats: what's in the wardrobe? [My Copy] Trends in Genetics, Vol. 22, No. 11. (November 2006), pp. 614-620. by Jesse E. Taylor, Gloria Rudenko posted to contingency_loci eukaryote gene_conversion recombination review by cambray on 2009-02-01 12:24:00 as along with 1 person cerca
	New Superfamilies of Eukaryotic DNA Transposons and Their Internal Divisions [My Copy] Mol Biol Evol, Vol. 26, No. 5. (1 May 2009), pp. 983-993. by Weidong Bao, Matthew G. Jurka, Vladimir V. Kapitonov, Jerzy Jurka posted to classification eukaryote transposon by druvus on 2009-01-29 11:25:43 as along with 3 people jlncdr gwallau operon
	Cell Lineages and the Logic of Proliferative Control [My Copy] PLoS Biol, Vol. 7, No. 1. (20 January 2009), e1000015. by Arthur D. Lander, Kimberly K. Gokoffski, Frederic Y. M. Wan, Qing Nie, Anne L. Calof posted to development eukaryote feedback mathematical_model by jjray on 2009-01-27 19:15:10 as along with 6 people and 1 group kentsis tyrell_turing samubernard pablocarb biomcgary dlobo GEB
	Genome-scale compositional comparisons in eukaryotes. [My Copy] Genome research, Vol. 11, No. 4. (April 2001), pp. 540-546. by A. J. Gentles, S. Karlin posted to eukaryote genome model by druvus on 2009-01-26 14:16:08 as
	Fundamentally different strategies for transcriptional regulation are revealed by information-theoretical analysis of binding motifs [My Copy] (21 Jan 2009) by Leonid A. Mirny, Zeba Wunderlich posted to eukaryote gene_regulation information prokaryote transcriptional_regulation by jjray on 2009-01-02 18:02:44 as along with 3 people emptyhb chrn akraemer

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evolution	33
18s	18
genome	12
phylogeny	11
protein	11
ribosome	10
transcription	10
development	9
gene	9
network	9
rna	9
gene_regulation	8
la	7
mrna	7
polymerase	7
prokaryote	7
review	7
yeast	7
annotation	6
clone_libraries	6
enzyme	6
pcr	6
picoplankton	6
regulation	6
translation	6
trna	6
aravind	5
dna	5
mathematical_model	5
bacteria	4
bistability	4
chromatin	4
distribution	4
embryonic	4
epigenetics	4
hypothesis	4
inactive	4
ires	4
photosynthesis	4
phylogenetics	4
promoter	4
saccharomyces	4
signaling	4
structure	4
symbiosis	4
virus	4
algae	3
alveolate	3
amoeba	3
cell	3
chlorophyta	3
classic	3
comparative	3
comperative_genomics	3
cpg	3
diversity	3
dna-methylation	3
dna_chip	3
drosophila	3
feedback	3
fish	3
gene_conversion	3
gene_expression	3
genomics	3
intron	3
lake	3
lugol	3
metagenomics	3
motif	3
nudibranch	3
ocean	3
origin	3
parasite	3
phylogenomics	3
picobiliphytes	3
plastid	3
prasinophyceae	3
probes	3
recombination	3
repair	3
single_cell	3
transcriptional_regulation	3
wga	3
archaea	2
biophysics	2
cells	2
chromosome_organization	2
contingency_loci	2
factor	2
homolog	2
melanogaster	2
mice	2
morphogenesis	2
noncoding	2
nucleosome	2
positive_feedback	2
supertree	2
translational	2
tree-of-life	2
vivo	2

Tag eukaryote [111 articles] Export

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