Tag gene-expression [more than 800 articles] Export

Recent papers classified by the tag gene-expression.

	Meta-analysis of age-related gene expression profiles identifies common signatures of aging [My Copy] Bioinformatics, Vol. 25, No. 7. (1 April 2009), pp. 875-881. by Joao P. de Magalhaes, Joao Curado, George M. Church posted to signature gene-expression ageing by Zephyrus on 2009-11-20 05:47:15 as along with 7 people and 1 group jfr guhjy daforerog dswan rdiaz vertikalist renatomilani BTS-PT-AS-CS
	GWAS meets microarray: are the results of genome-wide association studies and gene-expression profiling consistent? Prostate cancer as an example. [My Copy] PloS one, Vol. 4, No. 8. (4 August 2009), e6511. by Ivan P. Gorlov, Gary E. Gallick, Olga Y. Gorlova, Christopher Amos, Christopher J. Logothetis posted to microarray gwas gene-expression consistency by Zephyrus on 2009-11-20 00:37:35 as along with 8 people and 1 group daforerog rdiaz pkonings frohike kimorley brianb kshameer neils Journal picks
	Identification of novel ER-α target genes in breast cancer cells: Gene- and cell-selective co-regulator recruitment at target promoters determines the response to 17β-estradiol and tamoxifen [My Copy] Molecular and Cellular Endocrinology, Vol. 314, No. 1. (15 January 2010), pp. 90-100. by Andrea Romano, Michiel Adriaens, Sabine Kuenen, et al.Bert Delvoux, Gerard Dunselman, Chris Evelo, Patrick Groothuis posted to therapy tamoxifen gene-expression estrogen coregulators cancer breast by Zephyrus on 2009-11-13 18:50:28 as along with 1 person tonamswish
	Bi-correlation clustering algorithm for determining a set of co-regulated genes [My Copy] Bioinformatics, Vol. 25, No. 21. (1 November 2009), pp. 2795-2801. by Anindya Bhattacharya, Rajat K. De posted to readlater gene-expression biclustering by colm on 2009-11-13 14:08:00 as along with 6 people meanerelk TRHvidsten barriot dolchan kevinzheng1983 rdiaz
	NCBI GEO: archive for high-throughput functional genomic data [My Copy] Nucl. Acids Res., Vol. 37, No. suppl_1. (1 January 2009), pp. D885-890. by Tanya Barrett, Dennis B. Troup, Stephen E. Wilhite, et al.Pierre Ledoux, Dmitry Rudnev, Carlos Evangelista, Irene F. Kim, Alexandra Soboleva, Maxim Tomashevsky, Kimberly A. Marshall, Katherine H. Phillippy, Patti M. Sherman, Rolf N. Muertter, Ron Edgar posted to meta-analyse gene-expression experimental by vertikalist to the group BTS-PT-AS-CS on 2009-11-13 09:57:11 as along with 5 people and 1 group Zephyrus daforerog jfr songpku behindtherabbit Roswell Cancer Crosstalk
	[5] Standards in Gene Expression Microarray Experiments [My Copy] Methods in Enzymology, Vol. 411 (2006), pp. 63-78. by M. Salit posted to standard microarray medicine genomics gene-expression experiment cross-study cross-laboratory by bertelsen on 2009-11-06 15:20:34 as
	ArrayExpress update--from an archive of functional genomics experiments to the atlas of gene expression [My Copy] Nucl. Acids Res., Vol. 37, No. suppl_1. (1 January 2009), pp. D868-872. by Helen Parkinson, Misha Kapushesky, Nikolay Kolesnikov, et al.Gabriella Rustici, Mohammad Shojatalab, Niran Abeygunawardena, Hugo Berube, Miroslaw Dylag, Ibrahim Emam, Anna Farne, Ele Holloway, Margus Lukk, James Malone, Roby Mani, Ekaterina Pilicheva, Tim F. Rayner, Faisal Rezwan, Anjan Sharma, Eleanor Williams, Xiangqun Z. Bradley, Tomasz Adamusiak, Marco Brandizi, Tony Burdett, Richard Coulson, Maria Krestyaninova, Pavel Kurnosov, Eamonn Maguire, Sudeshna G. Neogi, Philippe Rocca-Serra, Susanna-Assunta Sansone, Nataliya Sklyar, Mengyao Zhao, Ugis Sarkans, Alvis Brazma posted to rna-seq repository microarray gene-expression functional-genomics database atlas by bertelsen on 2009-11-05 22:40:22 as along with 9 people ptrobajo daforerog guhjy samfromklamart vkwn Borelli jfr kittipat abizar
	Transcription is required for establishment of germline methylation marks at imprinted genes. [My Copy] Genes & development, Vol. 23, No. 1. (1 January 2009), pp. 105-117. by M. Chotalia, S. A. Smallwood, N. Ruf, et al.C. Dawson, D. Lucifero, M. Frontera, K. James, W. Dean, G. Kelsey posted to oocyte imprinting gene-expression epigenetics dna-methylation by aprickett on 2009-11-05 15:06:16 as along with 2 people and 1 group bpcusack rschulz Imprinting
	Combinatorial binding predicts spatio-temporal cis-regulatory activity [My Copy] Nature, Vol. 462, No. 7269. (05 November 2009), pp. 65-70. by Robert P. Zinzen, Charles Girardot, Julien Gagneur, Martina Braun, Eileen E. M. Furlong posted to transcription-factor-binding gene-expression expression_patterns drosophila data bioinformatics by pedrobeltrao on 2009-11-04 19:42:35 as along with 11 people cajunsushi emptyhb toszko roys inesdesantiago fenghezi balabu iskathy djkt megraw TRHvidsten
	Reconstruction of the yeast Snf1 kinase regulatory network reveals its role as a global energy regulator. [My Copy] Molecular systems biology, Vol. 5 (03 November 2009) by Renata Usaite, Michael C. Jewett, Ana Paula P. Oliveira, John R. Yates, Lisbeth Olsson, Jens Nielsen posted to yeast scerevisiae metabolism kinase gene-expression data by pedrobeltrao on 2009-11-04 00:31:09 as along with 3 people ptrobajo arne greg
	Analysis of Cell Fate from Single-Cell Gene Expression Profiles in C. elegans [My Copy] Vol. 139, No. 3. (30 October 2009), pp. 623-633. by Xiao Liu, Fuhui Long, Hanchuan Peng, et al.Sarah J. Aerni, Min Jiang, Adolfo Sánchez-Blanco, John I. Murray, Elicia Preston, Barbara Mericle, Serafim Batzoglou, Eugene W. Myers, Stuart K. Kim posted to gene-expression data cell-fate c_elegans by pedrobeltrao on 2009-10-30 01:21:32 as
	Prenatal sex differences in the human brain [My Copy] Mol Psychiatry, Vol. 14, No. 11. (01 November 2009), pp. 988-989. by B. Reinius, E. Jazin posted to prenatal human genetics gene-expression gender dimorphism differences development brain bioinformatics by jclau on 2009-10-24 15:49:11 as
	Canalization of Gene Expression in the Drosophila Blastoderm by Gap Gene Cross Regulation [My Copy] PLoS Biol, Vol. 7, No. 3. (10 March 2009), e1000049. by Manu, Svetlana Surkova, Alexander V. Spirov, et al.Vitaly V. Gursky, Hilde Janssens, Ah-Ram Kim, Ovidiu Radulescu, Carlos E. Vanario-Alonso, David H. Sharp, Maria Samsonova, John Reinitz posted to theory segmentation gene-expression drosophila by chiufanlee on 2009-10-23 19:21:31 as along with 3 people xinhe2 dolchan biomcgary
	Size Regulation in the Segmentation of Drosophila: Interacting Interfaces between Localized Domains of Gene Expression Ensure Robust Spatial Patterning [My Copy] Physical Review Letters, Vol. 103, No. 16. (2009), 168102. by Sergei Vakulenko, Manu, John Reinitz, Ovidiu Radulescu posted to theory segmentation pattern gene-expression by chiufanlee on 2009-10-23 09:21:53 as
	The Yin and Yang of P-TEFb regulation: implications for human immunodeficiency virus gene expression and global control of cell growth and differentiation. [My Copy] Microbiology and molecular biology reviews : MMBR, Vol. 70, No. 3. (September 2006), pp. 646-659. by Qiang Zhou, Jasper H. Yik posted to immune hiv gene-expression breast-cancer by lkakinami on 2009-10-23 05:30:01 as
	Gene expression profiling integrated into network modelling reveals heterogeneity in the mechanisms of BRCA1 tumorigenesis. [My Copy] British journal of cancer, Vol. 101, No. 8. (20 October 2009), pp. 1469-1480. by R. Fernández-Ramires, X. Solé, L. De Cecco, et al.G. Llort, A. Cazorla, N. Bonifaci, M. J. Garcia, T. Caldés, I. Blanco, M. Gariboldi, M. A. Pierotti, M. A. Pujana, J. Benítez, A. Osorio posted to hereditary gene-expression cancer breast brca1 by Zephyrus to the group Breast Cancer Reading Club on 2009-10-15 14:02:56 as
	Evaluation and optimization of clustering in gene expression data analysis. [My Copy] Bioinformatics (Oxford, England), Vol. 20, No. 10. (10 July 2004), pp. 1535-1545. by A. Fazel Famili, Ganming Liu, Ziying Liu posted to silhouette kmeans gene-expression clustering-evaluation clustering cluster-stability by paszkows on 2009-10-14 10:10:28 as along with 3 people meanerelk jfr dps
	Systematic bioinformatic analysis of expression levels of 17,330 human genes across 9,783 samples from 175 types of healthy and pathological tissues. [My Copy] Genome biology, Vol. 9, No. 9. (2008) by Sami Kilpinen, Reija Autio, Kalle Ojala, et al.Kristiina Iljin, Elmar Bucher, Henri Sara, Tommi Pisto, Matti Saarela, Rolf I. Skotheim, Mari Björkman, John-Patrick P. Mpindi, Saija Haapa-Paananen, Paula Vainio, Henrik Edgren, Maija Wolf, Jaakko Astola, Matthias Nees, Sampsa Hautaniemi, Olli Kallioniemi posted to gene-expression cancer by zufar on 2009-10-09 13:33:38 as along with 10 people and 1 group daforerog jfr shikin grahamc pengchy imina guhjy klo fpattyn dolchan GeneGo
	Genetics of gene expression and its effect on disease [My Copy] Nature, Vol. 452, No. 7186. (27 March 2008), pp. 423-428. by Valur Emilsson, Gudmar Thorleifsson, Bin Zhang, et al.Amy S. Leonardson, Florian Zink, Jun Zhu, Sonia Carlson, Agnar Helgason, G. Bragi Walters, Steinunn Gunnarsdottir, Magali Mouy, Valgerdur Steinthorsdottir, Gudrun H. Eiriksdottir, Gyda Bjornsdottir, Inga Reynisdottir, Daniel Gudbjartsson, Anna Helgadottir, Aslaug Jonasdottir, Adalbjorg Jonasdottir, Unnur Styrkarsdottir, Solveig Gretarsdottir, Kristinn P. Magnusson, Hreinn Stefansson, Ragnheidur Fossdal, Kristleifur Kristjansson, Hjortur G. Gislason, Tryggvi Stefansson, Bjorn G. Leifsson, Unnur Thorsteinsdottir, John R. Lamb, Jeffrey R. Gulcher, Marc L. Reitman, Augustine Kong, Eric E. Schadt, Kari Stefansson posted to review gene-expression disease by Zephyrus on 2009-10-08 20:12:36 as along with 19 people and 2 groups greg daforerog athma zufar druvus brianb djkt lp2 jo_davies shikin caseybrown ptrobajo vplagnol smbe2008 echinotrix natstreet sanchezbuelna guhjy Borelli 4th_floor_JC GeneGo
	How to infer gene networks from expression profiles [My Copy] Molecular Systems Biology, Vol. 3 (13 February 2007) by Mukesh Bansal, Vincenzo Belcastro, Alberto Ambesi-Impiombato, Diego di Bernardo posted to review primer networks gene-expression gene by Zephyrus on 2009-10-08 16:47:32 as along with 38 people and 3 groups Jporci beete tonamswish zufar nicholasflann icq242500260 guhjy antonkratz phoenixzxl bertelsen isimpson daforerog poirel agonzale roys Neeperando APRegier rdiaz klo Borelli ggallone ptrobajo druvus cswinburne jfr eckart_bindewald wnpx nickluscombe kengg mikaelhuss jrbanga BIBLIOma RockHI lp2 natstreet heliopais mariakmejia tmmurali Jarman Lab EBI-regulation Plantandetc
	The properties of high-dimensional data spaces: implications for exploring gene and protein expression data [My Copy] Nat Rev Cancer, Vol. 8, No. 1. (01 January 2008), pp. 37-49. by Robert Clarke, Habtom W. Ressom, Antai Wang, et al.Jianhua Xuan, Minetta C. Liu, Edmund A. Gehan, Yue Wang posted to review primer gene-expression data-analysis by Zephyrus on 2009-10-08 15:14:12 as along with 17 people and 1 group aviad_work ipark-kaist isimpson Scis0000002 baizhang bertelsen ptrobajo jfr guhjy tmmurali dwf frohike cjeans nedwards shikin blackm0k brianb Bioinformatics
	Genetics of human gene expression: mapping DNA variants that influence gene expression. [My Copy] Nature reviews. Genetics, Vol. 10, No. 9. (28 September 2009), pp. 595-604. by Vivian G. Cheung, Richard S. Spielman posted to variant mapping gene-expression dna by Zephyrus on 2009-10-08 15:10:35 as along with 17 people and 1 group rcr1991 PaulaBO greg frohike psique giovanni PabloMarin TRHvidsten misonneh sameersoi rdiaz ericrpaquet engelhardt ilyashl jbhiatt pkonings guhjy Journal picks
	Chromatin poises miRNA- and protein-coding genes for expression. [My Copy] Genome research, Vol. 19, No. 10. (27 October 2009), pp. 1742-1751. by Artem Barski, Raja Jothi, Suresh Cuddapah, et al.Kairong Cui, Tae-Young Y. Roh, Dustin E. Schones, Keji Zhao posted to hts gene-expression chromatin by polivares on 2009-10-08 09:52:34 as along with 9 people and 2 groups tonamswish heliopais samgj megraw inesdesantiago fpattyn djkt fenghezi idonaldson microRNA Neuroblastoma
	P bodies: at the crossroads of post-transcriptional pathways [My Copy] Nature Reviews Molecular Cell Biology, Vol. 8, No. 1. (01 January 2007), pp. 9-22. by Ana Eulalio, Isabelle Behm-Ansmant, Elisa Izaurralde posted to review regulation post-transcriptional pathways p-bodies mrna localization gene-expression cytoplasmic cell-biology by bertelsen on 2009-10-07 23:24:55 as along with 3 people and 2 groups xico margaritis lzhonsailing Neuroscience WetBiology
	Module networks: identifying regulatory modules and their condition-specific regulators from gene expression data. [My Copy] Nature genetics, Vol. 34, No. 2. (11 June 2003), pp. 166-176. by Eran Segal, Michael Shapira, Aviv Regev, et al.Dana Pe'er, David Botstein, Daphne Koller, Nir Friedman posted to regulatory-modules regulators regulation original networks module-networks modular gene-expression by bertelsen on 2009-10-06 23:03:41 as along with 26 people and 1 group chasmand stharward ipark-kaist VGreiff benjaminsb wangbo ajbattle cswinburne ggallone ealloza orzenil tuck bayesian wnpx tabu koller olympos fishtank dimatura karfunkel roys pkm dragonrez tvdbulck chrisamiller aviad_work Jarman Lab
	Averaged gene expressions for regression. [My Copy] Biostatistics (Oxford, England), Vol. 8, No. 2. (11 April 2007), pp. 212-227. by Mee Young Y. Park, Trevor Hastie, Robert Tibshirani posted to regression lasso hierarchical gene-expression clustering averaging by bertelsen on 2009-10-06 22:03:32 as along with 1 person jfr
	Multiple high-throughput analyses monitor the response of E. coli to perturbations. [My Copy] Science (New York, N.Y.), Vol. 316, No. 5824. (27 April 2007), pp. 593-597. by Nobuyoshi Ishii, Kenji Nakahigashi, Tomoya Baba, et al.Martin Robert, Tomoyoshi Soga, Akio Kanai, Takashi Hirasawa, Miki Naba, Kenta Hirai, Aminul Hoque, Pei Yee Y. Ho, Yuji Kakazu, Kaori Sugawara, Saori Igarashi, Satoshi Harada, Takeshi Masuda, Naoyuki Sugiyama, Takashi Togashi, Miki Hasegawa, Yuki Takai, Katsuyuki Yugi, Kazuharu Arakawa, Nayuta Iwata, Yoshihiro Toya, Yoichi Nakayama, Takaaki Nishioka, Kazuyuki Shimizu, Hirotada Mori, Masaru Tomita posted to gene-expression flux-measurements ecoli by JeremyZucker on 2009-10-06 21:49:17 as along with 8 people and 1 group ynaito cgaugain thomaskelder jjray raiyar dylan77 ytoya IgorG steinmetzlab
	An integration of complementary strategies for gene-expression analysis to reveal novel therapeutic opportunities for breast cancer [My Copy] Breast Cancer Research, Vol. 11, No. 4. (28 July 2009), R55. by Andrea Bild, Joel Parker, Adam Gustafson, et al.Chaitanya Acharya, Katherine Hoadley, Carey Anders, P. Kelly Marcom, Lisa Carey, Anil Potti, Joseph Nevins, Charles Perou posted to tumour therapy phenotype pathway-analysis integration gene-expression drug-discovery chemotherapy cancer by bertelsen on 2009-10-06 21:37:06 as along with 1 person srp33
	Probing noise in gene expression and protein production [My Copy] Physical Review E (Statistical, Nonlinear, and Soft Matter Physics), Vol. 80, No. 3. (2009), 031916. by Sandro Azaele, Jayanth R. Banavar, Amos Maritan posted to time systems-biology protein-expression noise models modelling gene-expression dynamics cell-population by bertelsen on 2009-10-06 21:00:47 as along with 2 people docv jjray
	Utilization of genomic signatures to direct use of primary chemotherapy. [My Copy] Current opinion in genetics & development, Vol. 18, No. 1. (February 2008), pp. 62-67. by Anil Potti, Joseph R. Nevins posted to therapy signatures review gene-expression clinical cancer by bertelsen on 2009-10-06 20:57:01 as
	Ets2 transcription factor in normal and neoplastic human breast tissue [My Copy] European Journal of Cancer, Vol. 42, No. 4. (March 2006), pp. 485-491. by Y. Buggy, T. Maguire, E. McDermott, A. Hill, N. Ohiggins, M. Duffy posted to transcription gene-expression ets2 breast by Zephyrus on 2009-10-06 00:32:29 as
	Gene expression phenotypic models that predict the activity of oncogenic pathways. [My Copy] Nature genetics. , Vol. 34, No. 2. (June 2003), pp. 226-230. by Erich Huang, Seiichi Ishida, Jennifer Pittman, et al.Holly Dressman, Andrea Bild, Mark Kloos, Mark D'Amico, Richard G. Pestell, Mike West, Joseph R. Nevins posted to phenotypes pathways oncogenesis models microarray gene-expression by bertelsen on 2009-10-05 23:57:33 as along with 1 person balicea
	Microarray Analysis of the Involution Switch [My Copy] Journal of Mammary Gland Biology and Neoplasia, Vol. 8, No. 3. (1 July 2003), pp. 309-319. by Richard W. E. Clarkson, Christine J. Watson posted to microarray involution gene-expression breast by Zephyrus on 2009-10-05 22:56:39 as
	Gene expression profiling of mammary gland development reveals putative roles for death receptors and immune mediators in post-lactational regression. [My Copy] Breast cancer research : BCR, Vol. 6, No. 2. (2004), pp. R92-R109. by Richard W. Clarkson, Matthew T. Wayland, Jennifer Lee, Tom Freeman, Christine J. Watson posted to lactational gene-expression development breast-feeding breast by Zephyrus on 2009-10-05 22:54:47 as along with 1 person kathleenkokolus
	Involution of the mouse mammary gland is associated with an immune cascade and an acute-phase response, involving LBP, CD14 and STAT3 [My Copy] Breast Cancer Res, Vol. 6, No. 2. (2004), pp. R75-R91. by Torsten Stein, Joanna Morris, Claire Davies, et al.Stephen W. Hall, Marie A. Duffy, Victoria Heath, Alexandra Bell, Roderick Ferrier, Gavin Sandilands, Barry Gusterson posted to involution immune gene-expression breast by Zephyrus on 2009-10-05 22:53:47 as
	Automated design of synthetic ribosome binding sites to control protein expression. [My Copy] Nature biotechnology, Vol. 27, No. 10. (04 October 2009), pp. 946-950. by Howard M. Salis, Ethan A. Mirsky, Christopher A. Voigt posted to gene-expression ecoli by michaelbarton to the group BergmanLab on 2009-10-05 16:05:07 as along with 4 people pmalkus johntheap mhamidi dbikard
	Balance between maternal and paternal alleles sets the timing of resource accumulation in the maize endosperm. [My Copy] Proceedings. Biological sciences / The Royal Society (30 September 2009) by Na Li, Hugh G. Dickinson posted to maize imprinting gene-expression epigenetics endosperm by rschulz on 2009-10-05 08:56:01 as
	Gene expression signatures, clinicopathological features, and individualized therapy in breast cancer. [My Copy] JAMA : the journal of the American Medical Association, Vol. 299, No. 13. (2 April 2008), pp. 1574-1587. by Chaitanya R. Acharya, David S. Hsu, Carey K. Anders, et al.Ariel Anguiano, Kelly H. Salter, Kelli S. Walters, Richard C. Redman, Sascha A. Tuchman, Cynthia A. Moylan, Sayan Mukherjee, William T. Barry, Holly K. Dressman, Geoffrey S. Ginsburg, Kelly P. Marcom, Katherine S. Garman, Gary H. Lyman, Joseph R. Nevins, Anil Potti posted to signature personalized-medicine pathology gene-expression clinical cancer by bertelsen on 2009-10-04 12:12:42 as along with 4 people ptrobajo Zephyrus jfr guhjy
	Theory and Limitations of Genetic Network Inference from Microarray Data [My Copy] Annals of the New York Academy of Sciences, Vol. 1115, No. Reverse Engineering Biological Networks: Opportunities and Challenges in Computational Methods for Pathway Inference. (December 2007), pp. 51-72. by Adam A. Margolin, O. Andrea Califan posted to theory statistical review reverse-engineering network microarray latent inference genetic gene-expression dependence by bertelsen on 2009-09-30 18:01:54 as along with 2 people talponer roys
	Factor analysis for gene regulatory networks and transcription factor activity profiles. [My Copy] BMC bioinformatics, Vol. 8 (23 February 2007), 61. by Iosifina Pournara, Lorenz Wernisch posted to transcription-factor sparse networks gene-regulation gene-expression factor-analysis by bertelsen on 2009-09-30 17:58:28 as along with 9 people ptrobajo isimpson akastrin guhjy shigepong lp2 hms kyriakos heliopais
	The Human Transcriptome Map: Clustering of Highly Expressed Genes in Chromosomal Domains [My Copy] Science, Vol. 291, No. 5507. (16 February 2001), pp. 1289-1292. by Huib Caron, Barbera Schaik, Merlijn Mee, et al.Frank Baas, Gregory Riggins, Peter Sluis, Marie-Christine Hermus, Ronald Asperen, Kathy Boon, P. A. Voute, Siem Heisterkamp, Antoine Kampen, Rogier Versteeg posted to gastric-cancer-group transcriptome pioneering map human gene-expression clustering chromosomal-expression by bertelsen on 2009-09-30 17:40:12 as along with 3 people florador jpoyatos Garamonfok
	A locally adaptive statistical procedure (LAP) to identify differentially expressed chromosomal regions [My Copy] Bioinformatics, Vol. 22, No. 21. (1 November 2006), pp. 2658-2666. by A. Callegaro, D. Basso, S. Bicciato posted to gastric-cancer-group tumour transcription tool statistical sequence-analysis ontologies integration gene-expression expression chromosomal-localization chromosomal-expression cancer annotations by bertelsen on 2009-09-30 17:32:49 as
	Linear models and empirical bayes methods for assessing differential expression in microarray experiments. [My Copy] Statistical applications in genetics and molecular biology, Vol. 3, No. 1. (2004) by Gordon K. Smyth posted to models microarray linear gene-expression differential bioconductor analysis by bertelsen on 2009-09-28 17:02:00 as along with 19 people and 1 group schwalb shikin jperkins zoex_99 ipark-kaist lwaldron paszkows isimpson Stew ihpark giovenko RMGraze maryee mayercd justescaped ugengma heliopais guhjy talponer Bioinformatics - CRUK
	Genome Expression Pathway Analysis Tool--analysis and visualization of microarray gene expression data under genomic, proteomic and metabolic context. [My Copy] BMC bioinformatics, Vol. 8 (02 June 2007), 179. by Markus Weniger, Julia C. Engelmann, Jörg Schultz posted to webservices visualization tool software proteomics pathways metabolic integration genomics gene-expression functional-genomics analysis by bertelsen on 2009-09-28 15:54:07 as along with 10 people and 1 group barriot daforerog udivi GeeSharpMinor guhjy jfr rdiaz ealloza frohike fmenolascina BioinfoCIPF
	Analyzing gene expression data in terms of gene sets: methodological issues [My Copy] Bioinformatics, Vol. 23, No. 8. (15 April 2007), pp. 980-987. by Jelle J. Goeman, Peter Buhlmann posted to test statistical set methodology gene-expression gene enrichment-analysis by bertelsen on 2009-09-28 15:26:19 as along with 19 people and 3 groups hzoltan zufar srp33 jperkins ptrobajo VGreiff tonamswish ipark-kaist aramesh2 ydhwang shikin raiyar ghattem jfr ealloza shigepong heliopais guhjy diging_data SIMR bioinformatics BioinfoCIPF BTS-PT-AS-CS
	Applications of a rat multiple tissue gene expression data set. [My Copy] Genome research, Vol. 14, No. 4. (April 2004), pp. 742-749. by John R. Walker, Andrew I. Su, David W. Self, et al.John B. Hogenesch, Hilmar Lapp, Rainer Maier, Daniel Hoyer, Graeme Bilbe posted to tissue-specific rats quantitative-trait-loci phenotype microarray gene-expression gene functional-genomics co-expression annotation by bertelsen on 2009-09-28 13:52:43 as along with 2 people grahamc eukfn
	Ontological analysis of gene expression data: current tools, limitations, and open problems [My Copy] Bioinformatics, Vol. 21, No. 18. (15 September 2005), pp. 3587-3595. by Purvesh Khatri, Sorin Draghici posted to tool review ontologies microarray gene-expression enrichment-analysis comparison analysis by bertelsen on 2009-09-27 20:19:00 as along with 18 people and 1 group darian jperkins ipark-kaist gjuggler isakemal Stew shikin diamantis Cortel dragonrez macavity1g Garamonfok sgoetz heliopais kristen yggdrasil ellakat marck Bioinformatics - CRUK
	Pathways to the analysis of microarray data. [My Copy] Trends in biotechnology, Vol. 23, No. 8. (August 2005), pp. 429-435. by R. Keira Curtis, Matej Oresic, Antonio Vidal-Puig posted to tool review pathways pathway-analysis microarray integration gene-expression enrichment-analysis analysis by bertelsen on 2009-09-27 20:16:12 as along with 11 people and 2 groups thomaskelder udivi AlexanderPico jfr saman_vp snuppepuppan textoris Ayest tardigrade ealloza heliopais ConklinLab BioinfoCIPF
	Methods for interpreting lists of affected genes obtained in a DNA microarray experiment. [My Copy] BMC proceedings, Vol. 3 Suppl 4 (2009) by Jakob Hedegaard, Cristina Arce, Silvio Bicciato, et al.Agnès Bonnet, Bart Buitenhuis, Melania Collado-Romero, Lene N. Conley, Magali Sancristobal, Francesco Ferrari, Juan J. Garrido, Martien Am A. Groenen, Henrik Hornshøj, Ina Hulsegge, Li Jiang, Angeles Jiménez-Marín, Arun Kommadath, Sandrine Lagarrigue, Jack Am A. Leunissen, Laurence Liaubet, Pieter Bt B. Neerincx, Haisheng Nie, Jan van der Poel, Dennis Prickett, María Ramirez-Boo, Johanna Mj M. Rebel, Christèle Robert-Granié, Axel Skarman, Mari A. Smits, Peter Sørensen, Gwenola Tosser-Klopp, Michael Watson posted to microarray interpretation gene-expression enrichment-analysis biology annotation by bertelsen on 2009-09-27 19:53:52 as
	FANTOM4 EdgeExpressDB: an integrated database of promoters, genes, microRNAs, expression dynamics and regulatory interactions [My Copy] Genome Biology, Vol. 10, No. 4. (2009), R39. by Jessica Severin, Andrew Waterhouse, Hideya Kawaji, et al.Timo Lassmann, Erik van Nimwegen, Piotr Balwierz, Michiel de Hoon, David Hume, Piero Carninci, Yoshihide Hayashizaki, Harukazu Suzuki, Carsten Daub, Alistair Forrest posted to transcription-factor transcription software regulator promoters network mirna integrating gene-regulation gene-expression database by bertelsen on 2009-09-27 16:12:38 as along with 10 people jfr Garamonfok rdiaz YukaH ealloza guhjy pengchy natstreet druvus dolchan

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microarray	215
cancer	126
evolution	104
review	88
breast	77
development	71
noise	64
thelist	64
analysis	58
signature	53
systems-biology	51
animal-model	50
fluctuations	45
stochasticity	45
networks	44
methods	43
morphogenesis	41
cancer-crosstalk	40
molecular-signaling	40
statistics	39
molecular-general	35
yeast	34
brain-anatomy	32
genotype-to-phenotype	32
genome-variation	31
transcription	31
experiment	29
regulatory-cascades	29
evolutionary-genomics	28
clustering	26
gene-regulation	26
bioinformatics	24
disease	24
ecophysiology	24
expression	23
informatics	23
phenotype	23
reviews	23
prognosis	22
theory	22
pathway	21
differential	20
experimental	20
functional-genomics	20
functional-genome	19
genetics	19
genomics	19
regulation	19
tools	19
neuroplasticity	18
tool	18
epigenetics	17
gene	17
general-physiology	17
regeneration	17
drug-discovery	16
gene-networks	16
pathways	16
stochastic	16
codon-usage	15
data-analysis	15
ecoli	15
genome-structure	15
human	15
mouse	15
network	15
chromatin	14
dna-methylation	14
enrichment-analysis	14
evolutionary-proteomics	14
genome-association	14
immune	14
integration	14
modeling-and-simulation	14
neuro-chem	14
profiles	14
annotation	13
data	13
musculoskeletal_systems	13
neuro-connectivity	13
rna	13
software	13
bayesian	12
biology	12
diseaseomics	12
gene-gene	12
genotype-phenotype	12
growth-regulation	12
model	12
prediction	12
reviewed	12
superlist	12
transcription-factor	12
adaptive-systems	11
estrogen	11
genome	11
genome-transcriptome	11
genotype	11
high-throughput	11
phenotypes	11

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