Tag gene-networks [94 articles] Export

Recent papers classified by the tag gene-networks.

	Integrated Genomic and Proteomic Analyses of a Systematically Perturbed Metabolic Network [My Copy] Science, Vol. 292, No. 5518. (4 May 2001), pp. 929-934. by Trey Ideker, Vesteinn Thorsson, Jeffrey A. Ranish, et al.Rowan Christmas, Jeremy Buhler, Jimmy K. Eng, Roger Bumgarner, David R. Goodlett, Ruedi Aebersold, Leroy Hood posted to yeast transcriptomics proteomics networks metabolism gene-networks by pmendes on 2009-11-12 20:37:57 as along with 14 people and 3 groups myzhang rsaito isimpson snuppepuppan BioGeek dragonrez bpb okarsligil opheliav wnpx gurkanbebek raiyar thomaskelder shikin Bioinformatics steinmetzlab GeneGo
	The Importance of Bottlenecks in Protein Networks: Correlation with Gene Essentiality and Expression Dynamics [My Copy] PLoS Comput Biol, Vol. 3, No. 4. (20 April 2007), e59. by Haiyuan Yu, Philip M. Kim, Emmett Sprecher, Valery Trifonov, Mark Gerstein posted to protein-interaction-networks gene-networks expression-data by lawraga on 2009-11-01 20:39:10 as along with 9 people flbarroso shung shikin jiny jfr zwang Takayuki hryk carlk
	How to infer gene networks from expression profiles [My Copy] Molecular Systems Biology, Vol. 3 (13 February 2007) by Mukesh Bansal, Vincenzo Belcastro, Alberto Ambesi-Impiombato, Diego di Bernardo posted to reverse-engineering microarray gene-regulation gene-networks gene-expression by bertelsen on 2009-09-20 23:02:48 as along with 38 people and 3 groups Jporci beete tonamswish zufar nicholasflann icq242500260 guhjy Zephyrus antonkratz phoenixzxl isimpson daforerog poirel agonzale roys Neeperando APRegier rdiaz klo Borelli ggallone ptrobajo druvus cswinburne jfr eckart_bindewald wnpx nickluscombe kengg mikaelhuss jrbanga BIBLIOma RockHI lp2 natstreet heliopais mariakmejia tmmurali Jarman Lab EBI-regulation Plantandetc
	The Systems Biology Graphical Notation [My Copy] Nature Biotechnology, Vol. 27, No. 8. (07 August 2009), pp. 735-741. by Nicolas L. Novere, Michael Hucka, Huaiyu Mi, et al.Stuart Moodie, Falk Schreiber, Anatoly Sorokin, Emek Demir, Katja Wegner, Mirit I. Aladjem, Sarala M. Wimalaratne, Frank T. Bergman, Ralph Gauges, Peter Ghazal, Hideya Kawaji, Lu Li, Yukiko Matsuoka, Alice Villeger, Sarah E. Boyd, Laurence Calzone, Melanie Courtot, Ugur Dogrusoz, Tom C. Freeman, Akira Funahashi, Samik Ghosh, Akiya Jouraku, Sohyoung Kim, Fedor Kolpakov, Augustin Luna, Sven Sahle, Esther Schmidt, Steven Watterson, Guanming Wu, Igor Goryanin, Douglas B. Kell, Chris Sander, Herbert Sauro, Jacky L. Snoep, Kurt Kohn, Hiroaki Kitano posted to visualization systems-biology standards software signalling networks modelling metabolism gene-networks by pmendes on 2009-08-19 17:25:13 as along with 38 people and 3 groups singhsh greg tonamswish pablocarb josepe abc623 daforerog abhishek_tiwari robertrentzsch ngehlenborg pekrau thegoose bertelsen fgibson Borelli thomaskelder dullhunk polivares chasmand brianb roys torfinnnome guhjy Zephyrus lenov reyez allysonlister apocapoc renatomilani VGreiff druvus sjcockell jandot megraw leliavski frohike fpattyn jhyang Orengo Group Journal Picks Journal picks Neuroblastoma
	Diversity sustains an evolving network [My Copy] Journal of The Royal Society Interface, Vol. 6, No. 38. (6 September 2009), pp. 793-799. by Ravi Mehrotra, Vikram Soni, Sanjay Jain posted to systems-biology gene-networks by MickElliot on 2009-08-11 22:47:46 as along with 1 person pauldobson
	GenePath: a system for inference of genetic networks and proposal of genetic experiments. [My Copy] Artificial intelligence in medicine, Vol. 29, No. 1-2. (t 2003), pp. 107-130. by Blaz Zupan, Ivan Bratko, Janez Demsar, et al.Peter Juvan, Tomaz Curk, Urban Borstnik, J. Robert Beck, John Halter, Adam Kuspa, Gad Shaulsky posted to epistasis gene-networks mutants networks by bfish on 2009-07-30 15:47:35 as
	Robustness analysis and tuning of synthetic gene networks. [My Copy] Bioinformatics, Vol. 23, No. 18. (15 September 2007), pp. 2415-2422. by G. Batt, B. Yordanov, R. Weiss, C. Belta posted to gene-networks modulating modules synthetic-biology by Scis0000002 on 2009-06-08 12:03:09 as along with 3 people Vincent_Rouilly austin grahamc
	Modular organization of cellular networks [My Copy] Proceedings of the National Academy of Sciences, Vol. 100, No. 3. (4 February 2003), pp. 1128-1133. by Alexander W. Rives, Timothy Galitski posted to gene-networks protein-interaction-networks by lawraga on 2009-04-18 17:29:30 as along with 9 people ycho0610 diamantis jiny karfunkel Evangelia stefanoallesina ellakat carlk roys
	Network biology: understanding the cell's functional organization [My Copy] Nature Reviews Genetics, Vol. 5, No. 2. (01 February 2004), pp. 101-113. by Albert-Laszlo Barabasi, Zoltan N. Oltvai posted to complex-systems gene-networks by lawraga on 2009-04-17 15:01:22 as along with 26 people and 1 group ess30 poirel tonamswish asadrahman tmarscha cn_honjyo behindtherabbit yangjustinc sschurer hadesnumb cswinburne babakap carlk pkm daforerog diamantis okarsligil bayesian tny mmt grahamc mirzazadeh lpfernandes karfunkel vietanh0 nolodie Bioinformatics
	Mapping the genetic architecture of gene expression in human liver. [My Copy] PLoS biology, Vol. 6, No. 5. (6 May 2008) by Eric E. Schadt, Cliona Molony, Eugene Chudin, et al.Ke Hao, Xia Yang, Pek Y. Lum, Andrew Kasarskis, Bin Zhang, Susanna Wang, Christine Suver, Jun Zhu, Joshua Millstein, Solveig Sieberts, John Lamb, Debraj GuhaThakurta, Jonathan Derry, John D. Storey, Iliana Avila-Campillo, Mark J. Kruger, Jason M. Johnson, Carol A. Rohl, Atila van Nas, Margarete Mehrabian, Thomas A. Drake, Aldons J. Lusis, Ryan C. Smith, F. Peter Guengerich, Stephen C. Strom, Erin Schuetz, Thomas H. Rushmore, Roger Ulrich posted to disease gene-networks by lawraga on 2009-01-30 19:15:27 as along with 14 people nicholso greg roys Borelli athma semrich ddunbar caseybrown vplagnol Schmidtc ptrobajo Jonesy guhjy hdopazo
	Integrating genotypic and expression data in a segregating mouse population to identify 5-lipoxygenase as a susceptibility gene for obesity and bone traits [My Copy] Nature Genetics, Vol. 37, No. 11. (02 October 2005), pp. 1224-1233. by Margarete Mehrabian, Hooman Allayee, Jirina Stockton, et al.Pek Y. Lum, Thomas A. Drake, Lawrence W. Castellani, Michael Suh, Christopher Armour, Stephen Edwards, John Lamb, Aldons J. Lusis, Eric E. Schadt posted to complex-systems disease gene-networks by lawraga on 2009-01-30 19:11:13 as along with 1 person roys
	An integrative genomics approach to infer causal associations between gene expression and disease. [My Copy] Nature genetics, Vol. 37, No. 7. (19 July 2005), pp. 710-717. by Eric E. Schadt, John Lamb, Xia Yang, et al.Jun Zhu, Steve Edwards, Debraj Guhathakurta, Solveig K. Sieberts, Stephanie Monks, Marc Reitman, Chunsheng Zhang, Pek Yee Y. Lum, Amy Leonardson, Rolf Thieringer, Joseph M. Metzger, Liming Yang, John Castle, Haoyuan Zhu, Shera F. Kash, Thomas A. Drake, Alan Sachs, Aldons J. Lusis posted to complex-systems disease gene-networks by lawraga on 2009-01-30 19:09:44 as along with 17 people and 1 group mnishimu roys nicholso ocs pcahan1 tuck brant ckehl koller giovanni lp2 dejori natstreet jo_davies caseybrown chrisamiller mitko GeschwindLab
	Learning biological networks: from modules to dynamics. [My Copy] Nature chemical biology, Vol. 4, No. 11. (November 2008), pp. 658-664. by R. Bonneau posted to complex-systems gene-networks machine-learning networks predictive-models by lawraga on 2009-01-30 18:54:55 as along with 5 people and 1 group guhjy hersh006 roys ggallone zwang Jarman Lab
	A predictive model for transcriptional control of physiology in a free living cell. [My Copy] Cell, Vol. 131, No. 7. (28 December 2007), pp. 1354-1365. by Richard Bonneau, Marc T. Facciotti, David J. Reiss, et al.Amy K. Schmid, Min Pan, Amardeep Kaur, Vesteinn Thorsson, Paul Shannon, Michael H. Johnson, J. Christopher Bare, William Longabaugh, Madhavi Vuthoori, Kenia Whitehead, Aviv Madar, Lena Suzuki, Tetsuya Mori, Dong-Eun E. Chang, Jocelyne Diruggiero, Carl H. Johnson, Leroy Hood, Nitin S. Baliga posted to complex-systems gene-networks machine-learning predictive-models by lawraga on 2009-01-30 18:53:28 as along with 11 people ptrobajo adampah edwardmorrissey guhjy tmmurali raiyar oelemento emptyhb megraw roys Borelli
	The Inferelator: an algorithm for learning parsimonious regulatory networks from systems-biology data sets de novo [My Copy] Genome Biology, Vol. 7, No. 5. (2006), R36. by Richard Bonneau, David Reiss, Paul Shannon, et al.Marc Facciotti, Leroy Hood, Nitin Baliga, Vesteinn Thorsson posted to complex-systems gene-networks machine-learning predictive-models by lawraga on 2009-01-30 18:51:14 as along with 7 people and 1 group ggallone cswinburne dragonrez jfr frohike roys jo_davies Jarman Lab
	A tunable synthetic mammalian oscillator [My Copy] Nature, Vol. 457, No. 7227., pp. 309-312. by Marcel Tigges, Tatiana T. Marquez-Lago, Jörg Stelling, Martin Fussenegger posted to gene-expression gene-networks gene-regulation oscillations by margaritis on 2009-01-19 15:17:03 as along with 7 people and 1 group jasonpark1 raik jbhiatt samubernard raiyar jec105 Vincent_Rouilly BP205
	A fast, robust and tunable synthetic gene oscillator. [My Copy] Nature (29 October 2008) by Jesse Stricker, Scott Cookson, Matthew R R. Bennett, William H H. Mather, Lev S S. Tsimring, Jeff Hasty posted to gene-expression gene-networks gene-regulation oscillations by margaritis on 2009-01-19 15:16:48 as along with 12 people and 3 groups sbottani jasonpark1 austin lflorez stasaki stringertheory allysonlister joseph_x_zhou yxue jbhiatt grahamc dbikard BP205 bioNetwork_sysBio SynBioSys
	Robust, Tunable Biological Oscillations from Interlinked Positive and Negative Feedback Loops [My Copy] Science, Vol. 321, No. 5885. (4 July 2008), pp. 126-129. by Tony Y. Tsai, Yoon S. Choi, Wenzhe Ma, Joseph R. Pomerening, Chao Tang, James E. Ferrell posted to gene-expression gene-networks gene-regulation oscillations by margaritis on 2009-01-19 15:16:18 as along with 11 people and 3 groups balabu jjray jasonpark1 t_richardson agonzale madhadron Borelli kentsis caseybrown stringertheory dbikard Synthetic Biology BP205 SynBioSys
	High-throughput chromatin information enables accurate tissue-specific prediction of transcription factor binding sites. [My Copy] Nucleic acids research, Vol. 37, No. 1. (1 January 2009), pp. 14-25. by Tom Whitington, Andrew C. Perkins, Timothy L. Bailey posted to gene-networks by polivares on 2009-01-14 17:03:44 as along with 7 people vingron akundaje inesdesantiago lptolik WanderingAengus xili03 maximilianh
	Exploring genetic interactions and networks with yeast. [My Copy] Nature reviews. Genetics, Vol. 8, No. 6. (June 2007), pp. 437-449. by Charles Boone, Howard Bussey, Brenda J. Andrews posted to buffering gene-networks yeast by Annab on 2008-12-02 14:59:07 as along with 12 people saket nzm sarahbates mtaschuk Petersarkies lp2 balajis zwang carlk guhjy marck hryk
	Metabolic gene regulation in a dynamically changing environment [My Copy] Nature, Vol. 454, No. 7208. (30 July 2008), pp. 1119-1122. by Matthew R. Bennett, Wyming L. Pang, Natalie A. Ostroff, et al.Bridget L. Baumgartner, Sujata Nayak, Lev S. Tsimring, Jeff Hasty posted to experiment gene-circuits gene-expression gene-networks glucose_galactose low_pass_filter yeast by margaritis on 2008-08-28 11:08:38 as along with 10 people and 1 group abhishek_tiwari boko4ikameto mmcclean joseph_x_zhou guhjy emptyhb erel10 caseybrown bayesian klo bioNetwork_sysBio
	A Network Model for the Correlation between Epistasis and Genomic Complexity [My Copy] PLoS ONE, Vol. 3, No. 7. (16 July 2008), e2663. by Rafael Sanjuán, Miguel R. Nebot posted to alife epistasis gene-networks gene-regulation grn robustness by mjoach on 2008-07-25 10:18:01 as along with 2 people renewang tomhebbron
	Epistasis correlates to genomic complexity [My Copy] PNAS, Vol. 103, No. 39. (26 September 2006), pp. 14402-14405. by Rafael Sanjuán, Santiago F. Elena posted to alife epistasis gene-networks gene-regulation grn by mjoach on 2008-07-25 10:16:02 as along with 2 people and 1 group cmm nicg FAB-lab
	Bio-logic: gene expression and the laws of combinatorial logic. [My Copy] Artificial life, Vol. 14, No. 1. (2008), pp. 121-133. by M. J. Schilstra, C. L. Nehaniv posted to alife gene-networks gene-regulation grn logic by mjoach on 2008-07-24 16:59:15 as
	Evolving modular genetic regulatory networks [My Copy] Evolutionary Computation, 2002. CEC '02. Proceedings of the 2002 Congress on In Proceedings of the 2002 Congress on Evolutionary Computation, CEC '02, Vol. 2 (2002), pp. 1872-1877. by J. Bongard posted to alife evolution gene-networks gene-regulation grn modularity by mjoach on 2008-07-18 22:01:14 as along with 2 people and 1 group wangbo dlobo GEB
	The Origins of Order: Self-Organization and Selection in Evolution [My Copy] (10 June 1993) by Stuart A. Kauffman posted to boolean gene-networks gene-regulation grn modelling network self-organization by mjoach on 2008-07-18 15:26:27 as along with 18 people and 3 groups kinop adamnellis knuu dlobo Adso sjung eldan bayesian balicea pchiusano voiklis daveh echinotrix spirit_of_numenor kray avo MarkVanHeeswijk santi515 GEB ComplexAdaptiveSystems ColDyn
	Stochastic Gene Expression in a Single Cell [My Copy] Science, Vol. 297, No. 5584. (16 August 2002), pp. 1183-1186. by Michael B. Elowitz, Arnold J. Levine, Eric D. Siggia, Peter S. Swain posted to ecoli gene-networks gene-regulation grn model modelling noise by mjoach on 2008-07-18 14:54:54 as along with 27 people and 2 groups pjmaybank ddcttrl pmalkus tomd66 struanmurray yyfwuhan balabu dbikard pkm cjryan ClaireFB wilvc madhadron cottrell mmt litam mhucka timflutre margaritis roland_ewald ptupper tvdbulck jiny balicea dylanwalker jjray austin dIEMoSIRIS MoSi-Rostock
	Subnets of scale-free networks are not scale-free: Sampling properties of networks [My Copy] Proceedings of the National Academy of Sciences of the United States of America, Vol. 102, No. 12. (22 March 2005), pp. 4221-4224. by Michael P. H. Stumpf, Carsten Wiuf, Robert M. May posted to gene-networks network sampling scale-free subsets by mjoach on 2008-07-18 14:30:14 as along with 14 people and 1 group AaronMcDaid houniao007 davidecellai colmryan sergiun dylanwalker kentsis bpb griota lshaw somasanyal iris_2001 Pao-Yang ilkert complex networks
	Graph theory and networks in Biology [My Copy] Systems Biology, IET In Systems Biology, IET, Vol. 1, No. 2. (2007), pp. 89-119. by O. Mason, M. Verwoerd posted to algorithms gene-networks gene-regulation graph grn modularity survey theory by mjoach on 2008-07-15 13:40:00 as along with 4 people winterstream pedagand lalgarve AbnerCYH
	Sexual reproduction selects for robustness and negative epistasis in artificial gene networks [My Copy] Nature, Vol. 440, No. 7080. (2006), pp. 87-90. by Ricardo B. R. Azevedo, Rolf Lohaus, Suraj Srinivasan, Kristen K. Dang, Christina L. Burch posted to epistasis evolution gene-networks grn robustness sex by mjoach on 2008-07-04 12:17:00 as along with 4 people and 2 groups jjray adamnellis eldan cmm GEB FAB-lab
	The use of neutral genotype-phenotype mappings for improved evolutionary search [My Copy] BT Technology Journal, Vol. 18, No. 4. (2000), pp. 103-111. by Rob Shipman, Mark Shackleton, Inman Harvey posted to boolean evolution gene-networks gene-regulation grn mutations network neutrality robustness by mjoach on 2008-06-27 15:04:53 as
	Toward A Biologically Defensible Model Of Development [My Copy] (1995) by Frank Dellaert posted to alife embryogenesis evolution evolution-of-shape gene-networks gene-regulation grn morphogen by mjoach on 2008-06-24 13:39:08 as
	Graph Theory and Networks in Biology [My Copy] (6 Apr 2006) by Oliver Mason, Mark Verwoerd posted to algorithms gene-networks gene-regulation graph grn modularity survey theory by mjoach on 2008-06-06 16:21:09 as along with 13 people diamantis saket imouthesmp BarrosH onyx lshaw karfunkel ptpases carlk Borelli ilkert ansobol dpf
	Regulatory gene networks and the properties of the developmental process [My Copy] Proceedings of the National Academy of Sciences of the United States of America, Vol. 100, No. 4. (18 February 2003), pp. 1475-1480. by Eric H. Davidson, David R. McClay, Leroy Hood posted to development embryogenesis evo-devo evolution evolution-of-shape gene-networks gene-regulation grn by mjoach on 2008-06-06 16:19:08 as along with 4 people dannya222 nsamways margaritis shikin
	Spontaneous emergence of modularity in cellular networks [My Copy] Journal of The Royal Society Interface, Vol. 5, No. 18. (6 January 2008), pp. 129-133. by Ricard V. SolÃ©, Sergi Valverde posted to emergence evolution grn modularity self-organization gene-networks gene-regulation by mjoach on 2008-06-02 15:07:02 as along with 5 people and 2 groups karthikraman bertelsen mattjb smgomez stefanoallesina ComplexAdaptiveSystems DSTO-CAS
	Evidence against the selfish operon theory [My Copy] Trends in Genetics In Pagination error in this issue, see Publisher's note in Vol. 21 issue 1 p. 36, Vol. 20, No. 6. (1 June 2004), pp. 232-234. by Csaba Pal, Laurence D. Hurst posted to evolution grn hgt modularity operons selfish gene-networks gene-regulation by mjoach on 2008-06-02 13:18:42 as along with 1 person rabu
	Selfish Operons: Horizontal Transfer May Drive the Evolution of Gene Clusters [My Copy] Genetics, Vol. 143, No. 4. (1 August 1996), pp. 1843-1860. by J. G. Lawrence, J. R. Roth posted to evolution grn hgt modularity operons selfish gene-networks gene-regulation by mjoach on 2008-06-02 13:09:15 as along with 1 person AaronDarling
	Design of genetic networks with specified functions by evolution in silico [My Copy] Proceedings of the National Academy of Sciences of the United States of America, Vol. 101, No. 2. (13 January 2004), pp. 580-585. by Paul FranÃ§ois, Vincent Hakim posted to evolution grn model modularity gene-networks gene-regulation by mjoach on 2008-05-29 11:55:54 as along with 8 people meanerelk Borelli rouault rklancer eldan monod dbikard discreteonyxorb
	Noise in eukaryotic gene expression. [My Copy] Nature, Vol. 422, No. 6932. (10 April 2003), pp. 633-637. by William J. Blake, Mads KAErn, Charles R. Cantor, J. J. Collins posted to expression grn noise transcription translation gene-networks gene-regulation by mjoach on 2008-05-29 10:59:01 as along with 10 people guhjy kentz katiehumphry ClaireFB rklancer cottrell dbikard margaritis jiny klo
	Estimating the size of the human interactome [My Copy] Proceedings of the National Academy of Sciences, Vol. 105, No. 19. (13 May 2008), pp. 6959-6964. by Michael P. H. Stumpf, Thomas Thorne, Eric de Silva, et al.Ronald Stewart, Hyeong J. An, Michael Lappe, Carsten Wiuf posted to complexity evolution grn interactome measure gene-networks gene-regulation by mjoach on 2008-05-19 20:53:12 as along with 23 people and 1 group aelef thegoose2 bicko tharris zwang chrissp100 sanchezbuelna guhjy phoenixzxl tmmurali neils paolomarcatili xingxu Ema cabbagesofdoom balicea marck friendpine brianb roys Evangelia dragonrez bpcusack C. elegans / WormBase
	The evolution of modularity in bacterial metabolic networks [My Copy] Proceedings of the National Academy of Sciences (6 May 2008), 0712149105. by Anat Kreimer, Elhanan Borenstein, Uri Gophna, Eytan Ruppin posted to evolution grn modularity network gene-networks gene-regulation by mjoach on 2008-05-19 20:51:54 as along with 13 people rouault ocs hryk qwermish deanmalmgren carlk jjray skato_toyaku tmmurali phoenixzxl roys pinney saket
	Evolving Dynamics in an Artificial Regulatory Network Model [My Copy] Parallel Problem Solving from Nature - PPSN VIII In Parallel Problem Solving from Nature - PPSN VIII, Vol. 3242 (2004), pp. 571-580. by Dwight P. Kuo, André Leier, Wolfgang Banzhaf posted to alife evolution grn modelling gene-networks gene-regulation by mjoach on 2008-05-19 15:45:58 as along with 1 person dlobo
	Exploring regenerative mechanisms found in flatworms by artificial evolutionary techniques using genetic regulatory networks [My Copy] Evolutionary Computation, 2003. CEC '03. The 2003 Congress on In The Congress on Evolutionary Computation, CEC '03., Vol. 3 (2003), pp. 2026-2033. by Peter Eggenberger-Hotz posted to alife embryogenesis evolution evolution-of-shape grn gene-networks gene-regulation by mjoach on 2008-05-19 15:33:53 as
	Genome-physics interaction as a new concept to reduce the number of genetic parameters in artificial evolution [My Copy] Evolutionary Computation, 2003. CEC '03. The 2003 Congress on In Congress on Evolutionary Computation, CEC '03, Vol. 1 (2003), pp. 191-198. by Peter Eggenberger-Hotz posted to alife embryogenesis evolution-of-shape grn gene-networks gene-regulation by mjoach on 2008-05-19 15:24:17 as along with 1 person and 1 group josedavid GEB
	Evolving morphologies of simulated 3D organisms based on differential gene expression [My Copy] In Proceedings of the Fourth European Conference on Artificial Life (1997), pp. 205-213. by Peter Eggenberger-Hotz posted to alife embryogenesis evolution-of-shape grn gene-networks gene-regulation by mjoach on 2008-05-19 15:17:27 as
	Evolving Fractal Proteins [My Copy] Evolvable Systems: From Biology to Hardware In Evolvable Systems: From Biology to Hardware, Vol. 2606 (2003), pp. 81-92. by Peter Bentley posted to alife cis-regulation grn gene-networks gene-regulation by mjoach on 2008-05-16 01:11:49 as
	Harnessing Morphogenesis [My Copy] In Proceedings of Information Processing in Cells and Tissues (1995), pp. 29-41. by N. Jakobi posted to alife ann cis-regulation grn modelling gene-networks gene-regulation by mjoach on 2008-05-16 00:39:27 as along with 1 person and 1 group dlobo GEB
	Coevolution of robustness, epistasis, and recombination favors asexual reproduction. [My Copy] Proc Natl Acad Sci U S A (23 July 2007) by Thomas Maccarthy, Aviv Bergman posted to alife epistasis evolution grn recombination robustness sex gene-networks gene-regulation evolution-of-sex by mjoach on 2008-05-14 09:46:00 as along with 2 people adamnellis sebastien_vigneau
	Operons in eukaryotes. [My Copy] Briefings in Functional Genomics and Proteomics, Vol. 3, No. 3. (November 2004), pp. 199-211. by T. Blumenthal posted to grn operons gene-networks gene-regulation by mjoach on 2008-05-14 09:35:20 as along with 3 people maximilianh imouthesmp Eonwe
	Modelling the evolution of genetic regulatory networks [My Copy] Journal of Theoretical Biology, Vol. 238, No. 4. (21 February 2006), pp. 737-753. by A. P. Quayle, S. Bullock posted to alife evolution grn gene-networks gene-regulation by mjoach on 2008-05-14 09:26:17 as along with 3 people and 1 group wangbo dlobo ramakris GEB

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gene-regulation	48
grn	32
alife	17
evolution	16
gene-expression	16
modelling	16
network-motifs	10
modularity	8
noise	7
systems-biology	7
theory	7
boolean	6
complex-systems	6
embryogenesis	6
evolution-of-shape	6
review	6
robustness	6
development	5
epistasis	5
fluctuations	5
reverse-engineering	5
simulation	5
transcriptomics	5
mendes	4
network	4
networks	4
stochasticity	4
disease	3
experiment	3
gene-circuits	3
machine-learning	3
operons	3
oscillations	3
predictive-models	3
yeast	3
algorithms	2
ann	2
cis-regulation	2
evolvability	2
graph	2
hgt	2
metabolism	2
microarray	2
model	2
protein-interaction-networks	2
self-organization	2
selfish	2
sex	2
software	2
survey	2
synthetic-biology	2
transcription	2
visualization	2
algorithm	1
autoregulation	1
bayesian-networks	1
buffering	1
cell-signalling	1
complexity	1
control_theory	1
discrete	1
ecoli	1
emergence	1
evo-devo	1
evolution-of-sex	1
expression	1
expression-data	1
finch	1
glucose_galactose	1
interactome	1
locomotion	1
logic	1
low_pass_filter	1
measure	1
modulating	1
modules	1
morphogen	1
mutants	1
mutations	1
ncrna	1
negative_feedback	1
network-evolution	1
neutrality	1
non-adaptive	1
phosphorylation	1
plasticity	1
post-transcriptional-modification	1
proteomics	1
recombination	1
regulation	1
rna-processing	1
sampling	1
scale-free	1
signalling	1
spectra	1
standards	1
subsets	1
toggle-switch	1
transcription-factor	1
translation	1

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