Tag genome-annotation [56 articles] Export

Recent papers classified by the tag genome-annotation.

	Exploiting proteomic data for genome annotation and gene model validation in Aspergillus niger [My Copy] BMC Genomics, Vol. 10, No. 1. (04 February 2009), 61. by James Wright, Deana Sugden, Sue F. McIntyre, et al.Isabel R. Garcia, Simon Gaskell, Igor Grigoriev, Scott Baker, Robert Beynon, Simon Hubbard posted to tandem-mass-spectra proteomics genome-annotation by nedwards on 2009-09-08 19:22:00 as along with 3 people and 1 group bcondon nlapalu stajich Mycology
	Gene-Boosted Assembly of a Novel Bacterial Genome from Very Short Reads [My Copy] PLoS Comput Biol, Vol. 4, No. 9. (26 September 2008), e1000186. by Steven L. Salzberg, Daniel D. Sommer, Daniela Puiu, Vincent T. Lee posted to srs-assembly srs genome-sequencing genome-annotation by michaelbarton on 2009-08-15 18:57:05 as along with 17 people and 5 groups skembel n00c operon azazello Thaverkamp dakelley sconlan GustavoLacerda treangen natstreet antonkratz druvus vaulot djkt Katje stajich semrich BergmanLab Papers recommended by the Roscoff Plankton Group iSEEM microbiology_nijmegen Mycology
	A Parsimony Approach to Biological Pathway Reconstruction/Inference for Genomes and Metagenomes [My Copy] PLoS Comput Biol, Vol. 5, No. 8. (14 August 2009), e1000465. by Yuzhen Ye, Thomas G. Doak posted to metabolism genome-sequencing genome-annotation by michaelbarton on 2009-08-15 18:53:55 as along with 6 people and 1 group mstumpf ptrobajo barriot rdiaz kshameer djkt iSEEM
	KEGG for linking genomes to life and the environment [My Copy] Nucl. Acids Res., Vol. 36, No. suppl_1. (11 January 2008), pp. D480-484. by Minoru Kanehisa, Michihiro Araki, Susumu Goto, et al.Masahiro Hattori, Mika Hirakawa, Masumi Itoh, Toshiaki Katayama, Shuichi Kawashima, Shujiro Okuda, Toshiaki Tokimatsu, Yoshihiro Yamanishi posted to genome-annotation kegg by karinlag on 2009-07-13 09:37:32 as along with 31 people ajsferreira Thaverkamp sjcockell JeremyZucker jperkins vkwn pablocarb VGreiff mqbphcw3 robert85 peterli jjray schwartzjmc ubcg08l allysonlister YukaH Cortel coela daforerog reyez namunet irenas guhjy raiyar barriot renatomilani shung hpaces massivemayhem natstreet TheresaNiederberger
	KEGG: Kyoto Encyclopedia of Genes and Genomes [My Copy] Nucl. Acids Res., Vol. 28, No. 1. (1 January 2000), pp. 27-30. by Minoru Kanehisa, Susumu Goto posted to genome-annotation kegg by karinlag on 2009-07-13 09:36:59 as along with 20 people mauriceccy akshayk jeremymiller cgaugain VGreiff sgoetz namunet csanford dquest j3xucite fisherp koerner ruvido noby naegele katerinakal grottenolm Evangelia natstreet jerome_ucsf_slb
	Gene Ontology: tool for the unification of biology [My Copy] Nature Genetics, Vol. 25, No. 1. (01 May 2000), pp. 25-29. by Michael Ashburner, Catherine A. Ball, Judith A. Blake, et al.David Botstein, Heather Butler, J. Michael Cherry, Allan P. Davis, Kara Dolinski, Selina S. Dwight, Janan T. Eppig, Midori A. Harris, David P. Hill, Laurie Issel-Tarver, Andrew Kasarskis, Suzanna Lewis, John C. Matese, Joel E. Richardson, Martin Ringwald, Gerald M. Rubin, Gavin Sherlock posted to genome-annotation go by karinlag on 2009-07-13 09:35:26 as along with 77 people and 8 groups krapnik suizan sanchezbuelna Jporci artaban421 mtaschuk niallhaslam Zephyrus nicklynch mauriceccy pmendes jperkins timhubbard ipark-kaist jeremymiller vkwn MarcoAlvarez humburg mqbphcw3 kiekyon ocs marti robert85 allysonlister daforerog chasmand lawraga jorisslob bertelsen mshossain ajbattle paszkows coela fbristow kshameer anthropomorphism nolodie dagmar Robinder verdicchio raistrick vertikalist aalibes miguel dragonrez lfriedl chad_davis yas balajis indigoviolet benny dullhunk nirfriedman fisherp caporaso helliontroy zlu gurkanbebek djkt massivemayhem incovoma leechuck aconesa sgoetz javamint bootsy PunkRock natstreet naegele CitoJam pablomendes carlk marck dgront roys rvosa fongenae 8_01 BTS-PT-AS-CS kdl Bioinformatics EisenLab T_lab biomedical-nlp FAB-lab
	High-throughput functional annotation and data mining with the Blast2GO suite [My Copy] Nucl. Acids Res., Vol. 36, No. 10. (1 June 2008), pp. 3420-3435. by Stefan Gotz, Juan M. Garcia-Gomez, Javier Terol, et al.Tim D. Williams, Shivashankar H. Nagaraj, Maria J. Nueda, Montserrat Robles, Manuel Talon, Joaquin Dopazo, Ana Conesa posted to blast2go genome-annotation go by karinlag on 2009-07-13 09:17:38 as along with 8 people seb1 margamvm kiekyon nlapalu Keywan guhjy barriot sgoetz
	Blast2GO: A Comprehensive Suite for Functional Analysis in Plant Genomics [My Copy] International Journal of Plant Genomics, Vol. 2008 (2008), pp. 1-13. by Ana Conesa, Stefan Götz posted to blast2go genome-annotation go by karinlag on 2009-07-13 09:15:41 as along with 4 people and 1 group seb1 Keywan gilmour70 sgoetz Ondex SABR - Bioenergy project
	Blast2GO: a universal tool for annotation, visualization and analysis in functional genomics research [My Copy] Bioinformatics, Vol. 21, No. 18. (15 September 2005), pp. 3674-3676. by Ana Conesa, Stefan Gotz, Juan M. Garcia-Gomez, Javier Terol, Manuel Talon, Montserrat Robles posted to blast2go genome-annotation go by karinlag on 2009-07-13 09:14:17 as along with 10 people seb1 Thaverkamp nlapalu bertelsen fbristow Garamonfok sgoetz talponer imelda aconesa
	Predicting protein function from sequence and structure [My Copy] Nature Reviews Molecular Cell Biology, Vol. 8, No. 12. (01 December 2007), pp. 995-1005. by David Lee, Oliver Redfern, Christine Orengo posted to genome-annotation by michaelbarton on 2009-07-02 16:24:28 as along with 13 people and 1 group operon smpraveena MarcoAlvarez skhadar neils cjeans zwang Evangelia hpaces Ema renatomilani kluck janasont MuraLab
	Automated protein function prediction--the genomic challenge. [My Copy] Briefings in Bioinformatics, Vol. 7, No. 3. (23 September 2006), pp. 225-242. by I. Friedberg posted to genome-annotation mdb-thesis by michaelbarton on 2009-07-02 16:23:17 as along with 12 people and 3 groups kiekyon MarcoAlvarez Keywan idoerg shung tjimenez yas marcius j3xucite cdallett sgoetz bootsy T_lab BioinfoCIPF SGU-CIPF
	Discovery and revision of Arabidopsis genes by proteogenomics [My Copy] Proceedings of the National Academy of Sciences, Vol. 105, No. 52. (30 December 2008), pp. 21034-21038. by Natalie E. Castellana, Samuel H. Payne, Zhouxin Shen, Mario Stanke, Vineet Bafna, Steven P. Briggs posted to genome-annotation proteogenomics proteomics tandem-mass-spectrometry by nedwards on 2009-06-29 16:23:53 as along with 5 people natstreet dandaman brianb TRHvidsten jmartin49
	The minimum information about a genome sequence (MIGS) specification. [My Copy] Nature biotechnology, Vol. 26, No. 5. (08 May 2008), pp. 541-547. by Dawn Field, George Garrity, Tanya Gray, et al.Norman Morrison, Jeremy Selengut, Peter Sterk, Tatiana Tatusova, Nicholas Thomson, Michael J. Allen, Samuel V. Angiuoli, Michael Ashburner, Nelson Axelrod, Sandra Baldauf, Stuart Ballard, Jeffrey Boore, Guy Cochrane, James Cole, Peter Dawyndt, Paul De Vos, Claude DePamphilis, Robert Edwards, Nadeem Faruque, Robert Feldman, Jack Gilbert, Paul Gilna, Frank Oliver O. Glöckner, Philip Goldstein, Robert Guralnick, Dan Haft, David Hancock, Henning Hermjakob, Christiane Hertz-Fowler, Phil Hugenholtz, Ian Joint, Leonid Kagan, Matthew Kane, Jessie Kennedy, George Kowalchuk, Renzo Kottmann, Eugene Kolker, Saul Kravitz, Nikos Kyrpides, Jim Leebens-Mack, Suzanna E. Lewis, Kelvin Li, Allyson L. Lister, Phillip Lord, Natalia Maltsev, Victor Markowitz, Jennifer Martiny, Barbara Methe, Ilene Mizrachi, Richard Moxon, Karen Nelson, Julian Parkhill, Lita Proctor, Owen White, Susanna-Assunta A. Sansone, Andrew Spiers, Robert Stevens, Paul Swift, Chris Taylor, Yoshio Tateno, Adrian Tett, Sarah Turner, David Ussery, Bob Vaughan, Naomi Ward, Trish Whetzel, Ingio San Gil, Gareth Wilson, Anil Wipat posted to annotation genome-annotation genomics metagenomics standards by idoerg on 2009-04-25 01:07:24 as along with 14 people and 1 group barriot balajis thegoose2 Thaverkamp sconlan Katje allysonlister jmeppley dullhunk guhjy tharris jamselem neils jfr microbiology_nijmegen
	Prediction of effective genome size in metagenomic samples [My Copy] Genome Biology, Vol. 8 (15 January 2007), R10. by Jeroen Raes, Jan O. Korbel, Martin J. Lercher, Christian von Mering, Peer Bork posted to genome-annotation genome-size metagenomics by idoerg on 2009-04-03 19:28:02 as along with 3 people and 1 group halinat yas michC T_lab
	Genome Projector: zoomable genome map with multiple views. [My Copy] BMC bioinformatics, Vol. 10, No. 1. (2009) by Kazuharu Arakawa, Satoshi Tamaki, Nobuaki Kono, et al.Nobuhiro Kido, Keita Ikegami, Ryu Ogawa, Masaru Tomita posted to genome-annotation genome-browser by idoerg on 2009-03-25 20:12:42 as along with 11 people dokky jfr guhjy daforerog smiddha nuin natstreet druvus behindtherabbit coela neils
	Comparative Functional Analysis of the Caenorhabditis elegans and Drosophila melanogaster Proteomes [My Copy] PLoS Biol, Vol. 7, No. 3. (3 March 2009), e1000048. by Sabine P. Schrimpf, Manuel Weiss, Lukas Reiter, et al.Christian H. Ahrens, Marko Jovanovic, Johan Malmström, Erich Brunner, Sonali Mohanty, Martin J. Lercher, Peter E. Hunziker, Ruedi Aebersold, Christian von Mering, Michael O. Hengartner posted to c-elegans comaprative-genomics drosophila genome-annotation genomics by idoerg on 2009-03-05 02:15:14 as along with 10 people and 1 group aktas robfsouza ogishima coela gurprit_raunu cajunsushi biomcgary gerodono renatomilani bpcusack Marcotte_Lab
	Identifying protein-coding genes in genomic sequences [My Copy] Genome Biology, Vol. 10, No. 1. (30 January 2009), 201. by Jennifer Harrow, Alinda Nagy, Alexandre Reymond, et al.Tyler Alioto, Laszlo Patthy, Stylianos Antonarakis, Roderic Guigo posted to gene-prediction genome-annotation genome-sequencing mdb-thesis by michaelbarton on 2009-03-02 22:42:01 as along with 14 people and 2 groups jfr antonkratz robfsouza nlapalu renatomilani ArtemPankin hpaces guhjy idoerg jm12 pawelszczesny natstreet barriot druvus Bioinformatics Khavkin's lab
	Annotations for all by all - the BioSapiens network. [My Copy] Genome biology, Vol. 10, No. 2. (10 February 2009) by Janet Thornton, posted to biosapiens genome-annotation janet-thornton by dullhunk on 2009-02-10 13:24:42 as along with 4 people guhjy niallhaslam Keywan druvus
	Quantifying environmental adaptation of metabolic pathways in metagenomics [My Copy] Proceedings of the National Academy of Sciences, Vol. 106, No. 5. (3 February 2009), pp. 1374-1379. by Tara A. Gianoulis, Jeroen Raes, Prianka V. Patel, et al.Robert Bjornson, Jan O. Korbel, Ivica Letunic, Takuji Yamada, Alberto Paccanaro, Lars J. Jensen, Michael Snyder, Peer Bork, Mark B. Gerstein posted to genome-annotation metadata metagenomics microbiology by idoerg on 2009-02-04 22:01:39 as along with 16 people and 2 groups paccanarolab vvoorr djkt jjray roys sharpton Lizzy_fun skembel jlgreen Thaverkamp dbensasson anphony michaelbarton trfield larsjuhljensen jmeppley Paccanaro Lab iSEEM
	If you build it, they might come [My Copy] Nature Reviews Microbiology, Vol. 7, No. 2., pp. 90-90. by Roy Welch, Laura Welch posted to genome-annotation by dullhunk on 2009-01-26 08:48:26 as along with 2 people behindtherabbit druvus
	Annotating genomes with massive-scale RNA sequencing. [My Copy] Genome biology, Vol. 9, No. 12. (2008), R175. by France Denoeud, Jean-Marc M. Aury, Corinne Da Silva, et al.Benjamin Noel, Odile Rogier, Massimo Delledonne, Michele Morgante, Giorgio Valle, Patrick Wincker, Claude Scarpelli, Olivier Jaillon, François Artiguenave posted to algorithm genome-annotation next-generation-sequencing software by pengchy on 2008-12-30 06:31:13 as along with 20 people and 1 group hzoltan cthachuk GustavoLacerda jamselem n00c jonilaserson ghattem nlapalu jmcq dandaman abizar dakelley inesdesantiago mhamada balicea fhalbrit GeeSharpMinor natstreet druvus neils SIMR bioinformatics
	Metagenome Annotation Using a Distributed Grid of Undergraduate Students [My Copy] PLoS Biol, Vol. 6, No. 11. (25 November 2008), e296. by Pascal Hingamp, Céline Brochier, Emmanuel Talla, Daniel Gautheret, Denis Thieffry, Carl Herrmann posted to annotation genome-annotation by dullhunk on 2008-11-25 15:55:09 as along with 17 people and 3 groups daforerog operon azazello Stew JustinCrocker nuin jmeppley xingxu guhjy nitiniitk dbikard dchughes druvus neils djkt ptrobajo treangen Bioinformatics - CRUK Centre de Recherches Interdisciplinaires iSEEM
	Protein sequence tags: A novel solution for comparative proteomics [My Copy] PROTEOMICS, Vol. 5, No. 9. (2005), pp. 2364-2368. by Karsten Kuhn, Thorsten Prinz, Jürgen Schäfer, et al.Christian Baumann, Marco Schärfke, Stefan Kienle, Josef Schwarz, Sandra Steiner, Christian Hamon posted to genome-annotation n-terminal-peptides peptide-identification proteomics tandem-mass-spectrometry by nedwards on 2008-09-22 22:18:37 as along with 1 person brianb
	Human Proteinpedia enables sharing of human protein data [My Copy] Nature Biotechnology, Vol. 26, No. 2., pp. 164-167. by Suresh Mathivanan, Mukhtar Ahmed, Natalie G. Ahn, et al.Hainard Alexandre, Ramars Amanchy, Philip C. Andrews, Joel S. Bader, Brian M. Balgley, Marcus Bantscheff, Keiryn L. Bennett, Erik Björling, Blagoy Blagoev, Ron Bose, Samir K. Brahmachari, Alma S. Burlingame, Xosé R. Bustelo, Gerard Cagney, Greg T. Cantin, Helene L. Cardasis, Julio E. Celis, Raghothama Chaerkady, Feixia Chu, Philip A. Cole, Catherine E. Costello, Robert J. Cotter, David Crockett, James P. Delany, Angelo M. De Marzo, Leroi V. Desouza, Eric W. Deutsch, Eric Dransfield, Gerard Drewes, Arnaud Droit, Michael J. Dunn, Kojo Elenitoba-Johnson, Rob M. Ewing, Jennifer Van Eyk, Vitor Faca, Jayson Falkner, Xiangming Fang, Catherine Fenselau, Daniel Figeys, Pierre Gagné, Cecilia Gelfi, Kris Gevaert, Jeffrey M. Gimble, Florian Gnad, Renu Goel, Pavel Gromov, Samir M. Hanash, William S. Hancock, H. C. Harsha, Gerald Hart, Faith Hays, Fuchu He, Prashantha Hebbar, Kenny Helsens, Heiko Hermeking, Winston Hide, Karin Hjernø, Denis F. Hochstrasser, Oliver Hofmann, David M. Horn, Ralph H. Hruban, Nieves Ibarrola, Peter James, Ole N. Jensen, Pia H. Jensen, Peter Jung, Kumaran Kandasamy, Indu Kheterpal, Reiko F. Kikuno, Ulrike Korf, Roman Körner, Bernhard Kuster, Min-Seok Kwon, Hyoung-Joo Lee, Young-Jin Lee, Michael Lefevre, Minna Lehvaslaiho, Pierre Lescuyer, Fredrik Levander, Megan S. Lim, Christian Löbke, Joseph A. Loo, Matthias Mann, Lennart Martens, Juan Martinez-Heredia, Mark Mccomb, James Mcredmond, Alexander Mehrle, Rajasree Menon, Christine A. Miller, Harald Mischak, Sujatha S. Mohan, Riaz Mohmood, Henrik Molina, Michael F. Moran, James D. Morgan, Robert Moritz, Martine Morzel, David C. Muddiman, Anuradha Nalli, Daniel J. Navarro, Thomas A. Neubert, Osamu Ohara, Rafael Oliva, Gilbert S. Omenn, Masaaki Oyama, Young-Ki Paik, Kyla Pennington, Rainer Pepperkok, Balamurugan Periaswamy, Emanuel F. Petricoin, Guy G. Poirier, Keshava T. S. Prasad, Samuel O. Purvine, Abdul B. Rahiman, Prasanna Ramachandran, Y. L. Ramachandra, Robert H. Rice, Jens Rick, Ragna H. Ronnholm, Johanna Salonen, Jean-Charles Sanchez, Thierry Sayd, Beerelli Seshi, Kripa Shankari, Shi J. Sheng, Vivekananda Shetty, K. Shivakumar, Richard J. Simpson, Ravi Sirdeshmukh, Michael K. W. Siu, Jeffrey C. Smith, Richard D. Smith, David J. States, Sumio Sugano, Matthew Sullivan, Giulio Superti-Furga, Maarit Takatalo, Visith Thongboonkerd, Jonathan C. Trinidad, Mathias Uhlen, Joël Vandekerckhove, Julian Vasilescu, Timothy D. Veenstra, José-Manuel Vidal-Taboada, Mauno Vihinen, Robin Wait, Xiaoyue Wang, Stefan Wiemann, Billy Wu, Tao Xu, John R. Yates, Jun Zhong, Ming Zhou, Yunping Zhu, Petra Zurbig, Akhilesh Pandey posted to genome-annotation wikipedia by dullhunk on 2008-02-20 14:41:39 as along with 7 people Arnaud brianb guhjy tmmurali jdiezperezj drbal jfr
	Steady progress and recent breakthroughs in the accuracy of automated genome annotation [My Copy] Nat Rev Genet, Vol. 9, No. 1. (January 2008), pp. 62-73. by Michael R. Brent posted to genome genome-annotation sequencing by dchughes on 2007-12-18 13:20:53 as along with 10 people bcondon timflutre druvus guhjy jermth wenhan renatomilani drbal alexl GustavoLacerda
	Open annotation offers a democratic solution to genome sequencing [My Copy] Nature, Vol. 403, No. 6772. (24 February 2000) by T. Hubbard, E. Birney posted to genome-annotation by dullhunk on 2007-11-09 13:05:26 as along with 2 people timhubbard niallhaslam
	Genome re-annotation: a wiki solution? [My Copy] Genome Biology, Vol. 8 (01 February 2007), 102. by Steven L. Salzberg posted to genome-annotation wikinomics by dullhunk on 2007-11-09 08:43:13 as along with 4 people operon Thaverkamp druvus AlexanderPico
	Human genome: end of the beginning. [My Copy] Nature, Vol. 431, No. 7011. (21 October 2004), pp. 915-916. by L. D. Stein posted to genome-annotation human-genome by dullhunk on 2007-11-05 11:45:52 as along with 1 person jknabe
	Positional proteomics: preparation of amino-terminal peptides as a strategy for proteome simplification and characterization. [My Copy] Nat Protoc, Vol. 1, No. 4. (2006), pp. 1790-1798. by L. McDonald, R. J. Beynon posted to genome-annotation n-terminal-peptides proteomics tandem-mass-spectrometry by nedwards on 2007-10-30 15:17:02 as
	A vision for the future of genomics research. [My Copy] Nature, Vol. 422, No. 6934. (24 April 2003), pp. 835-847. by F. S. Collins, E. D. Green, A. E. Guttmacher, M. S. Guyer posted to francis-collins genome genome-annotation grand-challenges by dullhunk on 2007-10-29 12:51:39 as along with 1 person and 1 group xico WetBiology
	Genome sequences and great expectations. [My Copy] Genome Biology, Vol. 2, No. 1. (2001) by I. Iliopoulos, S. Tsoka, M. A. Andrade, et al.P. Janssen, B. Audit, A. Tramontano, A. Valencia, C. Leroy, C. Sander, C. A. Ouzounis posted to genome-annotation by dullhunk on 2007-10-26 14:07:45 as
	Beyond 100 genomes. [My Copy] Genome Biology, Vol. 4, No. 5. (2003) by P. Janssen, B. Audit, I. Cases, et al.N. Darzentas, L. Goldovsky, V. Kunin, N. Lopez-Bigas, J. M. Peregrin-Alvarez, J. B. Pereira-Leal, S. Tsoka, C. A. Ouzounis posted to genome-annotation by dullhunk on 2007-10-25 15:09:30 as along with 2 people shung bpb
	Genome coverage, literally speaking. The challenge of annotating 200 genomes with 4 million publications. [My Copy] EMBO Reports, Vol. 6, No. 5. (May 2005), pp. 397-399. by P. Janssen, L. Goldovsky, V. Kunin, N. Darzentas, C. A. Ouzounis posted to genome-annotation by dullhunk on 2007-10-25 14:37:42 as
	Genome annotation: from sequence to biology [My Copy] Nature Reviews Genetics, Vol. 2, No. 7. (July 2001), pp. 493-503. by Lincoln D. Stein posted to genome-annotation by dullhunk on 2007-10-16 17:39:44 as along with 4 people and 1 group akiii rshe stharward indigoviolet EisenLab
	Whole proteome analysis of post-translational modifications: Applications of mass-spectrometry for proteogenomic annotation [My Copy] Genome Res., Vol. 17, No. 9. (1 September 2007), pp. 1362-1377. by Nitin Gupta, Stephen Tanner, Navdeep Jaitly, et al.Joshua N. Adkins, Mary Lipton, Robert Edwards, Margaret Romine, Andrei Osterman, Vineet Bafna, Richard D. Smith, Pavel A. Pevzner posted to genome-annotation proteomics by nedwards on 2007-10-01 20:44:47 as along with 3 people stefanorb nitiniitk alexl
	Selective Isolation of N-Blocked Peptides by Isocyanate-Coupled Resin [My Copy] Anal. Chem., Vol. 79, No. 20. (14 September 2007), pp. 7910-7915. by Toshiyuki Mikami, Toshifumi Takao posted to genome-annotation n-terminal-peptides peptide-identification proteomics tandem-mass-spectrometry by nedwards on 2007-09-21 13:45:34 as
	Translation initiation at non-AUG triplets in mammalian cells [My Copy] J. Biol. Chem., Vol. 264, No. 9. (25 March 1989), pp. 5031-5035. by Ds Peabody posted to genome-annotation microorganism-identification sequence-database by nedwards on 2007-08-29 16:23:33 as
	A protein database constructed from low-coverage genomic sequence of Bacillus megaterium and its use for accelerated proteomic analysis [My Copy] Journal of Biotechnology, Vol. 124, No. 3. (25 July 2006), pp. 486-495. by Jibin Sun, Wei Wang, Claudia Hundertmark, An-Ping Zeng, Dieter Jahn, Wolf-Dieter Deckwer posted to bacillus genome-annotation microorganism-identification by nedwards on 2007-08-22 15:55:28 as
	A Method for Selective Isolation of the Amino-Terminal Peptide from [alpha]-Amino-Blocked Proteins [My Copy] Analytical Biochemistry, Vol. 222, No. 1. (October 1994), pp. 210-216. by T. H. Akiyama, T. Sasagawa, M. Suzuki, K. Titani posted to genome-annotation n-terminal-peptides peptide-identification proteomics tandem-mass-spectrometry by nedwards on 2007-08-14 18:28:14 as
	Exploring proteomes and analyzing protein processing by mass spectrometric identification of sorted N-terminal peptides [My Copy] Nat Biotech, Vol. 21, No. 5. (May 2003), pp. 566-569. by Kris Gevaert, Marc Goethals, Lennart Martens, et al.Jozef Van Damme, An Staes, Gregoire R. Thomas, Joel Vandekerckhove posted to genome-annotation n-terminal-peptides peptide-identification proteomics tandem-mass-spectrometry by nedwards on 2007-08-14 18:27:21 as
	Isolation of N-Terminal Protein Sequence Tags from Cyanogen Bromide Cleaved Proteins as a Novel Approach to Investigate Hydrophobic Proteins [My Copy] J. Proteome Res., Vol. 2, No. 6. (8 December 2003), pp. 598-609. by K. Kuhn, A. Thompson, T. Prinz, et al.J. Muller, C. Baumann, G. Schmidt, T. Neumann, C. Hamon posted to genome-annotation n-terminal-peptides peptide-identification proteomics tandem-mass-spectrometry by nedwards on 2007-08-14 18:26:30 as
	Positional proteomics: selective recovery and analysis of N-terminal proteolytic peptides [My Copy] Nature Methods, Vol. 2, No. 12. (18 November 2005), pp. 955-957. by Lucy Mcdonald, Duncan H. L. Robertson, Jane L. Hurst, Robert J. Beynon posted to genome-annotation n-terminal-peptides peptide-identification proteomics tandem-mass-spectrometry by nedwards on 2007-08-14 18:25:03 as
	High-Throughput Method for N-Terminal Sequencing of Proteins by MALDI Mass Spectrometry [My Copy] Anal. Chem., Vol. 77, No. 2. (15 January 2005), pp. 645-651. by M. Yamaguchi, T. Nakazawa, H. Kuyama, et al.T. Obama, E. Ando, Okamura, N. Ueyama, S. Norioka posted to genome-annotation n-terminal-peptides peptide-identification proteomics tandem-mass-spectrometry by nedwards on 2007-08-14 18:23:19 as
	Mass spectrometry allows direct identification of proteins in large genomes. [My Copy] Proteomics, Vol. 1, No. 5. (May 2001), pp. 641-650. by B. Küster, P. Mortensen, J. S. Andersen, M. Mann posted to genome-annotation peptide-identification proteomics tandem-mass-spectrometry by nedwards on 2007-08-14 16:08:02 as
	Dynamic spectrum quality assessment and iterative computational analysis of shotgun proteomic data: toward more efficient identification of post-translational modifications, sequence polymorphisms, and novel peptides. [My Copy] Mol Cell Proteomics, Vol. 5, No. 4. (April 2006), pp. 652-670. by A. I. Nesvizhskii, F. F. Roos, J. Grossmann, et al.M. Vogelzang, J. S. Eddes, W. Gruissem, S. Baginsky, R. Aebersold posted to genome-annotation peptide-identification proteomics tandem-mass-spectrometry by nedwards on 2007-08-08 14:21:13 as
	Interrogating the human genome using uninterpreted mass spectrometry data. [My Copy] Proteomics, Vol. 1, No. 5. (May 2001), pp. 651-667. by J. S. Choudhary, W. P. Blackstock, D. M. Creasy, J. S. Cottrell posted to genome-annotation peptide-identification proteomics tandem-mass-spectrometry by nedwards on 2007-08-08 14:10:03 as
	Novel gene and gene model detection using a whole genome open reading frame analysis in proteomics. [My Copy] Genome Biol, Vol. 7, No. 4. (2006) by D. Fermin, B. B. Allen, T. W. Blackwell, et al.R. Menon, M. Adamski, Y. Xu, P. Ulintz, G. S. Omenn, D. J. States posted to genome-annotation peptide-identification proteomics tandem-mass-spectrometry by nedwards on 2007-08-08 14:09:32 as along with 1 person alexl
	Genome annotation of Anopheles gambiae using mass spectrometry-derived data. [My Copy] BMC Genomics, Vol. 6 (2005) by D. E. Kalume, S. Peri, R. Reddy, et al.J. Zhong, M. Okulate, N. Kumar, A. Pandey posted to genome-annotation peptide-identification proteomics tandem-mass-spectrometry by nedwards on 2007-08-08 14:08:37 as
	The Alternative Splicing Gallery (ASG): bridging the gap between genome and transcriptome. [My Copy] Nucleic Acids Res, Vol. 32, No. 13. (2004), pp. 3977-3983. by J. Leipzig, P. Pevzner, S. Heber posted to alternative-splicing genome-annotation by nedwards on 2007-08-08 13:54:51 as along with 6 people greg setar Cortel radek dchughes antonkratz
	Splicing graphs and EST assembly problem [My Copy] Bioinformatics, Vol. 18, No. suppl_1. (1 July 2002), pp. S181-188. by Steffen Heber, Max Alekseyev, Sing-Hoi Sze, Haixu Tang, Pavel A. Pevzner posted to alternative-splicing genome-annotation by nedwards on 2007-08-08 13:54:19 as along with 5 people nwpuzebra poschm greg setar Cortel

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proteomics	19
tandem-mass-spectrometry	17
peptide-identification	15
genome	8
n-terminal-peptides	8
bioinformatics	4
go	4
biological-complexity	3
blast2go	3
genetics	3
genome-sequencing	3
genomics	3
metagenomics	3
yeast-genomics	3
alternative-splicing	2
annotation	2
gene-prediction	2
kegg	2
mdb-thesis	2
microorganism-identification	2
sequence-database	2
algorithm	1
bacillus	1
biosapiens	1
c-elegans	1
comaprative-genomics	1
drosophila	1
francis-collins	1
gene-calling	1
genome-browser	1
genome-size	1
grand-challenges	1
human-genome	1
janet-thornton	1
metabolism	1
metadata	1
microbiology	1
next-generation-sequencing	1
peptide-atlas	1
proteogenomics	1
sequencing	1
sequencing-by-hybridization-graph	1
software	1
srs	1
srs-assembly	1
standards	1
tandem-mass-spectra	1
wikinomics	1
wikipedia	1

Tag genome-annotation [56 articles] Export

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