Tag genome-wide [at least 200 articles] Export

Recent papers classified by the tag genome-wide.

	A genome-wide analysis of CpG dinucleotides in the human genome distinguishes two distinct classes of promoters. [My Copy] Proceedings of the National Academy of Sciences of the United States of America, Vol. 103, No. 5. (31 January 2006), pp. 1412-1417. by Serge Saxonov, Paul Berg, Douglas L. Brutlag posted to genome-wide cpg by aprickett on 2009-11-17 11:55:49 as along with 3 people iris42 antonkratz saru
	Combinatorial patterns of histone acetylations and methylations in the human genome [My Copy] Nature Genetics, Vol. 40, No. 7. (15 June 2008), pp. 897-903. by Zhibin Wang, Chongzhi Zang, Jeffrey A. Rosenfeld, et al.Dustin E. Schones, Artem Barski, Suresh Cuddapah, Kairong Cui, Tae-Young Roh, Weiqun Peng, Michael Q. Zhang, Keji Zhao posted to nucleosome histone_code genome-wide epigenetic by RyuOgawa on 2009-11-17 02:58:20 as along with 16 people and 1 group akakak hagechouchin443 suizifish tonamswish sebastien_vigneau gderwin oelemento raylim coela jernst bpcusack kambiz caseybrown djkt kengg inesdesantiago Epigenetics
	Genome-wide autozygosity mapping in human populations. [My Copy] Genetic epidemiology, Vol. 33, No. 2. (February 2009), pp. 172-180. by Shuang Wang, Chad Haynes, Francis Barany, Jurg Ott posted to snp roh population human homozygosity genome-wide autozigosity by ealloza on 2009-11-12 18:34:23 as along with 2 people psique daforerog
	Genome-scale DNA methylation maps of pluripotent and differentiated cells [My Copy] Nature, Vol. 454, No. 7205. (06 July 2008), pp. 766-770. by Alexander Meissner, Tarjei S. Mikkelsen, Hongcang Gu, et al.Marius Wernig, Jacob Hanna, Andrey Sivachenko, Xiaolan Zhang, Bradley E. Bernstein, Chad Nusbaum, David B. Jaffe, Andreas Gnirke, Rudolf Jaenisch, Eric S. Lander posted to histones genome-wide dna-methylation analysis by aprickett on 2009-11-06 11:01:13 as along with 14 people and 1 group saravana jmstat mmartin christoffpale guhjy rschulz jernst jfr mrochman gdb jasonflannick inesdesantiago djkt wsjames Oxford Virology
	An integrated resource for genome-wide identification and analysis of human tissue-specific differentially methylated regions (tDMRs) [My Copy] Genome Research, Vol. 18, No. 9. (24 September 2008), pp. 1518-1529. by Vardhman K. Rakyan, Thomas A. Down, Natalie P. Thorne, et al.Paul Flicek, Eugene Kulesha, Stefan GrÃ¤f, Eleni M. Tomazou, Liselotte BÃ¤ckdahl, Nathan Johnson, Marlis Herberth, Kevin L. Howe, David K. Jackson, Marcos M. Miretti, Heike Fiegler, John C. Marioni, Ewan Birney, Tim J. P. Hubbard, Nigel P. Carter, Simon TavarÃ©, Stephan Beck posted to methylome medip genome-wide epigenetics dna_methylation data_set bioinformatics 2008 by suizifish on 2009-11-05 04:19:23 as along with 8 people timhubbard abizar iris42 huiminC oelemento rschulz vega niallhaslam
	Human DNA methylomes at base resolution show widespread epigenomic differences [My Copy] Nature, Vol. 462, No. 7271. (14 October 2009), pp. 315-322. by Ryan Lister, Mattia Pelizzola, Robert H. Dowen, et al.R. David Hawkins, Gary Hon, Julian Tonti-Filippini, Joseph R. Nery, Leonard Lee, Zhen Ye, Que-Minh Ngo, Lee Edsall, Jessica Antosiewicz-Bourget, Ron Stewart, Victor Ruotti, A. Harvey Millar, James A. Thomson, Bing Ren, Joseph R. Ecker posted to human genome-wide dna-methylation by rschulz on 2009-10-28 11:51:39 as along with 27 people and 4 groups djkt hyojinkang gbloeb akakak guhjy jessopher malay gdb qayub greg neils megraw mamitamura tonamswish rsaito clearbluespring RyuOgawa hagechouchin443 devinmhellesen daveGerrard polivares dswan fenghezi colinveal frohike liqbbi ethanmj JLab CTCF BergmanLab Journal picks
	ChIP-seq: advantages and challenges of a maturing technology. [My Copy] Nature reviews. Genetics, Vol. 10, No. 10. (08 October 2009), pp. 669-680. by Peter J. Park posted to review nucleosome histone_modification genome-wide by RyuOgawa on 2009-10-24 03:44:29 as along with 24 people and 6 groups akakak hzoltan dchughes heliopais giovenko inesdesantiago pradiptaray dakelley clearbluespring akundaje rdiaz kimorley leliavski humburg reyez qayub fenghezi tonamswish robertrentzsch polivares idonaldson rschulz cvaldes danmaclean Journal picks Orengo Group Journal Picks JLab BergmanLab CTCF Chromatin
	Histone modifications at human enhancers reflect global cell-type-specific gene expression [My Copy] Nature, Vol. 459, No. 7243. (18 March 2009), pp. 108-112. by Nathaniel D. Heintzman, Gary C. Hon, R. David Hawkins, et al.Pouya Kheradpour, Alexander Stark, Lindsey F. Harp, Zhen Ye, Leonard K. Lee, Rhona K. Stuart, Christina W. Ching, Keith A. Ching, Jessica E. Antosiewicz-Bourget, Hui Liu, Xinmin Zhang, Roland D. Green, Victor V. Lobanenkov, Ron Stewart, James A. Thomson, Gregory E. Crawford, Manolis Kellis, Bing Ren posted to nucleosome histone_modification genome-wide by RyuOgawa on 2009-10-21 19:58:57 as along with 16 people and 2 groups akakak suizifish inesdesantiago gdb djkt tonamswish t08681mn akundaje leliavski scjparker fenghezi TRHvidsten humburg frohike idonaldson sebastien_vigneau Epigenetics CTCF
	Whole-Genome Mapping of Histone H3 Lys4 and 27 Trimethylations Reveals Distinct Genomic Compartments in Human Embryonic Stem Cells [My Copy] Cell Stem Cell, Vol. 1, No. 3. (13 September 2007), pp. 286-298. by X. Zhao, X. Han, J. Chew, et al.J. Liu, K. Chiu, A. Choo, Y. Orlov, W. Sung, A. Shahab, V. Kuznetsov posted to nucleosome histone_modification genome-wide by RyuOgawa on 2009-10-08 10:32:40 as along with 3 people stubrown inesdesantiago jernst
	Whole-Genome Analysis of Histone H3 Lysine 4 and Lysine 27 Methylation in Human Embryonic Stem Cells [My Copy] Cell Stem Cell, Vol. 1, No. 3. (13 September 2007), pp. 299-312. by G. Pan, S. Tian, J. Nie, et al.C. Yang, V. Ruotti, H. Wei, G. Jonsdottir, R. Stewart, J. Thomson posted to nucleosome histone_modification genome-wide by RyuOgawa on 2009-10-08 10:32:14 as along with 2 people tonamswish gderwin
	A Chromatin Landmark and Transcription Initiation at Most Promoters in Human Cells [My Copy] Cell, Vol. 130, No. 1. (13 July 2007), pp. 77-88. by M. Guenther, S. Levine, L. Boyer, R. Jaenisch, R. Young posted to nucleosome histone_modification genome-wide by RyuOgawa on 2009-10-08 10:32:00 as along with 6 people rsaito hkuhn clearbluespring gderwin margaritis inesdesantiago
	Genomewide analysis of PRC1 and PRC2 occupancy identifies two classes of bivalent domains. [My Copy] PLoS genetics, Vol. 4, No. 10. (31 October 2008), e1000242. by Manching Ku, Richard P. Koche, Esther Rheinbay, et al.Eric M. Mendenhall, Mitsuhiro Endoh, Tarjei S. Mikkelsen, Aviva Presser, Chad Nusbaum, Xiaohui Xie, Andrew S. Chi, Mazhar Adli, Simon Kasif, Leon M. Ptaszek, Chad A. Cowan, Eric S. Lander, Haruhiko Koseki, Bradley E. Bernstein posted to nucleosome histone_modification genome-wide by RyuOgawa on 2009-10-08 10:31:38 as along with 5 people hkuhn mchotalia inesdesantiago jernst caseybrown
	Genome-wide maps of chromatin state in pluripotent and lineage-committed cells. [My Copy] Nature, Vol. 448, No. 7153. (2 August 2007), pp. 553-560. by Tarjei S. Mikkelsen, Manching Ku, David B. Jaffe, et al.Biju Issac, Erez Lieberman, Georgia Giannoukos, Pablo Alvarez, William Brockman, Tae-Kyung K. Kim, Richard P. Koche, William Lee, Eric Mendenhall, Aisling O'Donovan, Aviva Presser, Carsten Russ, Xiaohui Xie, Alexander Meissner, Marius Wernig, Rudolf Jaenisch, Chad Nusbaum, Eric S. Lander, Bradley E. Bernstein posted to nucleosome histone_modification genome-wide by RyuOgawa on 2009-10-08 10:30:35 as along with 19 people and 1 group hkuhn stubrown ewilban1 tonamswish gdb guhjy brant dchughes vega kengg vplagnol olympos epigenetics bioyang cabbagezs rschulz slevy03 jasonflannick inesdesantiago EisenLab
	Allele-specific expression assays using Solexa. [My Copy] BMC genomics, Vol. 10, No. 1. (9 September 2009), 422. by Bradley J. Main, Ryan D. Bickel, Lauren M. McIntyre, Rita M. Graze, Peter P. Calabrese, Sergey V. Nuzhdin posted to solexa sequencing genome-wide expression allelic allele-specific-expression allele-specific by sebastien_vigneau on 2009-09-24 23:48:13 as along with 2 people manduca natstreet
	A genome-wide view of Caenorhabditis elegans base-substitution mutation processes. [My Copy] Proceedings of the National Academy of Sciences of the United States of America, Vol. 106, No. 38. (22 September 2009), pp. 16310-16314. by Dee R. Denver, Peter C. Dolan, Larry J. Wilhelm, et al.Way Sung, J. Ignacio Lucas-Lledó, Dana K. Howe, Samantha C. Lewis, Kazu Okamoto, W. Kelley Thomas, Michael Lynch, Charles F. Baer posted to mutation genome-wide evolution by zwang on 2009-09-24 08:21:50 as along with 4 people and 1 group cisevol operon maren bpcusack BergmanLab
	A genome-wide association study identifies novel risk loci for type 2 diabetes. [My Copy] Nature, Vol. 445, No. 7130. (22 February 2007), pp. 881-885. by Robert Sladek, Ghislain Rocheleau, Johan Rung, et al.Christian Dina, Lishuang Shen, David Serre, Philippe Boutin, Daniel Vincent, Alexandre Belisle, Samy Hadjadj, Beverley Balkau, Barbara Heude, Guillaume Charpentier, Thomas J. Hudson, Alexandre Montpetit, Alexey V. Pshezhetsky, Marc Prentki, Barry I. Posner, David J. Balding, David Meyre, Constantin Polychronakos, Philippe Froguel posted to gwas genome-wide diabetes assocation by ptrobajo on 2009-09-17 09:40:02 as along with 14 people wagrob liqbbi jclau jbhiatt koller renewang jo_davies brant johncumbers msierk joepickrell sim82 dbgrant mcgannd
	Similarities and Differences in Genome-Wide Expression Data of Six Organisms [My Copy] PLoS Biol, Vol. 2, No. 1. (15 December 2003), e9. by Sven Bergmann, Jan Ihmels, Naama Barkai posted to sequence microarray genome-wide gene-expression functional-genomics comparative annotation by bertelsen on 2009-09-09 14:52:38 as along with 10 people and 3 groups thegoose2 floatingpoint roys tharris dragonrez Ayest RMGraze marcius koller jeremymiller C. elegans / WormBase BioinfoCIPF SGU-CIPF
	The Genetic Signatures of Noncoding RNAs [My Copy] PLoS Genet, Vol. 5, No. 4. (24 April 2009), e1000459. by John S. Mattick posted to non-protein-coding transcripts signature sequence-analysis rnai rna genome-wide genetic gene-regulation functional-genomics function epigenetic disease development complexity by bertelsen on 2009-09-05 10:16:09 as along with 22 people and 2 groups hzoltan Zephyrus antonkratz frohike natstreet guhjy gdb giovenko galka8_diploma aditi9783 daforerog ealloza dpollard hrogers coela ilyashl fenghezi reyez maximilianh giovanni djkt stajich RockmanLab Mycology
	Prediction of a key role of motifs binding E2F and NR2F in down-regulation of numerous genes during the development of the mouse hippocampus. [My Copy] BMC bioinformatics, Vol. 7 (02 August 2006), 367. by M. Dabrowski, S. Aerts, B. Kaminska posted to genetic-network genome-wide hipocampus in-silico by cisstem on 2009-07-29 16:21:05 as
	Genome-wide transcription and the implications for genomic organization [My Copy] Nature Reviews Genetics, Vol. 8, No. 6. (08 May 2007), pp. 413-423. by Philipp Kapranov, Aarron T. Willingham, Thomas R. Gingeras posted to disease evolution genome-wide genomics modular organization review transcription by bertelsen on 2009-07-22 22:05:24 as along with 23 people and 5 groups Jporci bartjacobse daforerog coela hagechouchin443 emptyhb pengchy guhjy balicea xico dchughes kengg sebastien_vigneau zwang ajgentles Ema asddd hanansh antonkratz vietanh0 maximilianh GeeSharpMinor inesdesantiago Bioinformatics WetBiology G4ID Plantandetc Genetics-of-Gambling
	Risk of estrogen receptor-positive and -negative breast cancer and single-nucleotide polymorphism 2q35-rs13387042. [My Copy] Journal of the National Cancer Institute, Vol. 101, No. 14. (15 July 2009), pp. 1012-1018. by R. L. Milne, J. Benítez, H. Nevanlinna, et al.T. Heikkinen, K. Aittomäki, C. Blomqvist, J. I. Arias, M. P. Zamora, B. Burwinkel, C. R. Bartram, A. Meindl, R. K. Schmutzler, A. Cox, I. Brock, G. Elliott, M. W. Reed, M. C. Southey, L. Smith, A. B. Spurdle, J. L. Hopper, F. J. Couch, J. E. Olson, X. Wang, Z. Fredericksen, P. Schürmann, M. Bremer, P. Hillemanns, T. Dörk, P. Devilee, C. J. van Asperen, R. A. Tollenaar, C. Seynaeve, P. Hall, K. Czene, J. Liu, Y. Li, S. Ahmed, A. M. Dunning, M. Maranian, P. D. Pharoah, G. Chenevix-Trench, J. Beesley, , , N. V. Bogdanova, N. N. Antonenkova, I. V. Zalutsky, H. Anton-Culver, A. Ziogas, H. Brauch, C. Justenhoven, Y. D. Ko, S. Haas, P. A. Fasching, R. Strick, A. B. Ekici, M. W. Beckmann, G. G. Giles, G. Severi, L. Baglietto, D. R. English, O. Fletcher, N. Johnson, I. dos Santos Silva, J. Peto, C. Turnbull, S. Hines, A. Renwick, N. Rahman, B. G. Nordestgaard, S. E. Bojesen, H. Flyger, D. Kang, K. Y. Yoo, D. Y. Noh, A. Mannermaa, V. Kataja, V. M. Kosma, M. García-Closas, S. Chanock, J. Lissowska, L. A. Brinton, J. Chang-Claude, S. Wang-Gohrke, C. Y. Shen, H. C. Wang, J. C. Yu, S. T. Chen, M. Bermisheva, T. Nikolaeva, E. Khusnutdinova, M. K. Humphreys, J. Morrison, R. Platte, D. F. Easton, posted to breast genetics genome-wide hr by misonneh to the group MGEL Reading on 2009-07-15 04:15:58 as along with 1 person Terkko
	Breast Cancer Single-Nucleotide Polymorphisms: Statistical Significance and Clinical Utility [My Copy] J. Natl. Cancer Inst., Vol. 101, No. 14. (15 July 2009), pp. 973-975. by Kenneth Offit posted to breast clinic comments genetics genome-wide review risk_factor by misonneh to the group MGEL Reading on 2009-07-15 04:10:40 as along with 1 person and 1 group Zephyrus Breast Cancer Reading Club
	A large-scale genome-wide association study of Asian populations uncovers genetic factors influencing eight quantitative traits. [My Copy] Nature genetics, Vol. 41, No. 5. (May 2009), pp. 527-534. by Yoon Shin S. Cho, Min Jin J. Go, Young Jin J. Kim, et al.Jee Yeon Y. Heo, Ji Hee H. Oh, Hyo-Jeong J. Ban, Dankyu Yoon, Mi Hee H. Lee, Dong-Joon J. Kim, Miey Park, Seung-Hun H. Cha, Jun-Woo W. Kim, Bok-Ghee G. Han, Haesook Min, Younjhin Ahn, Man Suk S. Park, Hye Ree R. Han, Hye-Yoon Y. Jang, Eun Young Y. Cho, Jong-Eun E. Lee, Nam H. Cho, Chol Shin, Taesung Park, Ji Wan W. Park, Jong-Keuk K. Lee, Lon Cardon, Geraldine Clarke, Mark I. McCarthy, Jong-Young Y. Lee, Jong-Koo K. Lee, Bermseok Oh, Hyung-Lae L. Kim posted to cohort genome-wide by misonneh to the group MGEL Reading on 2009-07-13 10:04:28 as along with 4 people and 1 group dpollard guhjy xingxu pkonings RockmanLab
	Oncogene-induced replication stress preferentially targets common fragile sites in preneoplastic lesions. A genome-wide study [My Copy] Oncogene, Vol. 27, No. 23. (17 December 2007), pp. 3256-3264. by P. K. Tsantoulis, A. Kotsinas, P. P. Sfikakis, et al.K. Evangelou, M. Sideridou, B. Levy, L. Mo, C. Kittas, X. R. Wu, A. G. Papavassiliou, V. G. Gorgoulis posted to deanbergman genome-wide replication by polivares on 2009-07-03 12:21:02 as along with 1 person jackjackjjj
	Genome-wide association studies, field synopses, and the development of the knowledge base on genetic variation and human diseases. [My Copy] American journal of epidemiology, Vol. 170, No. 3. (1 August 2009), pp. 269-279. by Muin J. Khoury, Lars Bertram, Paolo Boffetta, et al.Adam S. Butterworth, Stephen J. Chanock, Siobhan M. Dolan, Isabel Fortier, Montserrat Garcia-Closas, Marta Gwinn, Julian P. Higgins, A. Cecile Janssens, James Ostell, Ryan P. Owen, Roberta A. Pagon, Timothy R. Rebbeck, Nathaniel Rothman, Jonine L. Bernstein, Paul R. Burton, Harry Campbell, Anand Chockalingam, Helena Furberg, Julian Little, Thomas R. O'Brien, Daniela Seminara, Paolo Vineis, Deborah M. Winn, Wei Yu, John P. Ioannidis posted to epidemiology genome-wide review by misonneh to the group Roswell Cancer Crosstalk on 2009-06-29 11:07:59 as along with 7 people and 2 groups Geknitics Zephyrus gderwin qayub daforerog kimorley guhjy Journal picks MGEL Reading
	Genomewide association studies and human disease. [My Copy] The New England journal of medicine, Vol. 360, No. 17. (23 April 2009), pp. 1759-1768. by J. Hardy, A. Singleton posted to comments genome-wide review by misonneh to the group MGEL Reading on 2009-06-29 09:58:43 as along with 10 people and 1 group PabloMarin daforerog guhjy najwvandijk psique Zephyrus brianb ilyashl farhat jbhiatt Roswell Cancer Crosstalk
	Genome-wide association studies: Detecting gene-gene interactions that underlie human diseases. [My Copy] Nature reviews. Genetics, Vol. 10, No. 6. (12 May 2009), pp. 392-404. by Heather J. Cordell posted to genome-wide gxe gxg review by misonneh to the group MGEL Reading on 2009-06-29 09:57:47 as along with 17 people and 2 groups Geknitics rdiaz lwaldron PabloMarin kimorley ilyashl pkonings lp2 turnersd akundaje Zephyrus daforerog roys colmryan fenghezi jbhiatt guhjy Journal picks Roswell Cancer Crosstalk
	Genome-wide computational prediction of transcriptional regulatory modules reveals new insights into human gene expression. [My Copy] Genome Res (10 April 2006) by Mathieu Blanchette, Alain R R. Bataille, Xiaoyu Chen, et al.Christian Poitras, Josée Laganière, Céline Lefèbvre, Geneviève Deblois, Vincent Giguère, Vincent Ferretti, Dominique Bergeron, Benoit Coulombe, François Robert posted to cis-regulatory genome-wide module by ashishanand on 2009-06-21 15:17:33 as along with 2 people and 1 group heliopais oannes Regulomics_UCHSC
	Coordination of replication and transcription along a Drosophila chromosome [My Copy] Genes & Development, Vol. 18, No. 24. (15 December 2004), pp. 3094-3105. by David M. Macalpine, Heather K. Rodríguez, Stephen P. Bell posted to genome-wide origin rep_origins replication replication_transcription tor by polivares on 2009-06-18 16:02:35 as
	Vector algebra in the analysis of genome-wide expression data. [My Copy] Genome biology, Vol. 3, No. 3. (2002) by F. G. Kuruvilla, P. J. Park, S. L. Schreiber posted to analysis gene-expression genome-wide vector by bertelsen on 2009-06-15 16:10:35 as along with 1 person VGreiff
	Biochemical systems analysis of genome-wide expression data [My Copy] Bioinformatics, Vol. 16, No. 11. (1 November 2000), pp. 1023-1037. by Eberhard O. Voit, Tomas Radivoyevitch posted to analysis biochemical data expression gene-expression genome-wide systems-biology by bertelsen on 2009-06-15 14:13:00 as along with 1 person kentz
	Genome-wide profiling of DNA methylation reveals a class of normally methylated CpG island promoters. [My Copy] PLoS Genet, Vol. 3, No. 10. (26 October 2007), pp. 2023-2036. by L. Shen, Y. Kondo, Y. Guo, et al.J. Zhang, L. Zhang, S. Ahmed, J. Shu, X. Chen, R. A. Waterland, J. P. Issa posted to 2007 cpg cpg_island data_set dna_methylation genome-wide promoter by suizifish on 2009-06-10 05:37:35 as along with 3 people iris42 sebastien_vigneau zwang
	Multi-scale correlations in continuous genomic data. [My Copy] Pac Symp Biocomput (2008), pp. 201-215. by R. E. Thurman, W. S. Noble, J. A. Stamatoyannopoulos posted to chip-chip chip-seq chromatin encode genome-wide heterochromatin signature by sebastien_vigneau on 2009-05-18 01:19:03 as along with 5 people and 1 group timflutre Eroslavochka guhjy operon dpollard EisenLab
	Shotgun bisulphite sequencing of the Arabidopsis genome reveals DNA methylation patterning [My Copy] Nature, Vol. 452, No. 7184. (17 February 2008), pp. 215-219. by Shawn J. Cokus, Suhua Feng, Xiaoyu Zhang, et al.Zugen Chen, Barry Merriman, Christian D. Haudenschild, Sriharsa Pradhan, Stanley F. Nelson, Matteo Pellegrini, Steven E. Jacobsen posted to arabidopsis cpg deep-seq dna-methylation epigenetics genome-wide periodicity plant sequencing solexa by rschulz to the group KCL & UCL Bioinformatics on 2009-05-15 11:45:16 as along with 15 people druvus darian iamlily1046 ychang0918 natstreet iris42 mmartin hkuhn kengg usagi-kirin djkt ghattem epigenetics mdimon slonik
	The interplay between transcription factors and microRNAs in genome-scale regulatory networks [My Copy] BioEssays, Vol. 31, No. 4. (April 2009), pp. 435-445. by Natalia J. Martinez, Albertha J. M. Walhout posted to genome-wide microrna network regulation transcription_factor by ealloza on 2009-05-13 17:58:43 as along with 4 people and 1 group heliopais tonamswish inesdesantiago guhjy microRNA
	dbSMR: a novel resource of genome-wide SNPs affecting microRNA mediated regulation [My Copy] BMC Bioinformatics, Vol. 10, No. 1. (2009), 108. by Manoj Hariharan, Vinod Scaria, Samir Brahmachari posted to database genome-wide microrna regulation snp target by ealloza on 2009-04-16 16:05:05 as along with 7 people and 1 group heliopais jfr songpku guhjy pengchy daforerog lwaldron microRNA
	A histone map of human chromosome 20q13.12. [My Copy] PLoS ONE, Vol. 4, No. 2. (2009) by P. Akan, M. Sahlén, P. Deloukas posted to binding ctcf genome-wide histone by sebastien_vigneau to the group Epigenetics on 2009-03-23 14:51:28 as along with 1 group CTCF
	How to interpret a genome-wide association study. [My Copy] JAMA : the journal of the American Medical Association, Vol. 299, No. 11. (19 March 2008), pp. 1335-1344. by Thomas A. Pearson, Teri A. Manolio posted to gwas association genome-wide review statistics by ptrobajo on 2009-03-23 00:25:49 as along with 11 people and 1 group operon daforerog kshameer Zephyrus psique qfwills cheyloveday misonneh guhjy BrianTomasik xingxu Roswell Cancer Crosstalk
	Genome-wide association studies for common diseases and complex traits. [My Copy] Nature reviews. Genetics, Vol. 6, No. 2. (01 February 2005), pp. 95-108. by Joel N. Hirschhorn, Mark J. Daly posted to association genome-wide qtl trait by fisherp on 2009-03-19 18:44:43 as along with 11 people and 1 group shikin ekostem Zephyrus cheyloveday misonneh pengchy caldavis oilcan indigoviolet massivemayhem dbgrant EisenLab
	Using ChIP-chip and ChIP-seq to study the regulation of gene expression: genome-wide localization studies reveal widespread regulation of transcription elongation. [My Copy] Methods (San Diego, Calif.), Vol. 48, No. 4. (9 August 2009), pp. 398-408. by Daniel A. Gilchrist, David C. Fargo, Karen Adelman posted to chip-chip chip-seq genome-wide polii rpii transcription by sebastien_vigneau on 2009-03-19 15:30:42 as along with 5 people fpattyn ewilban1 guhjy inesdesantiago idonaldson
	A Bayesian deconvolution strategy for immunoprecipitation-based DNA methylome analysis [My Copy] Nature Biotechnology, Vol. 26, No. 7. (08 July 2008), pp. 779-785. by Thomas A. Down, Vardhman K. Rakyan, Daniel J. Turner, et al.Paul Flicek, Heng Li, Eugene Kulesha, Stefan Graf, Nathan Johnson, Javier Herrero, Eleni M. Tomazou, Natalie P. Thorne, Liselotte Backdahl, Marlis Herberth, Kevin L. Howe, David K. Jackson, Marcos M. Miretti, John C. Marioni, Ewan Birney, Tim J. P. Hubbard, Richard Durbin, Simon Tavare, Stephan Beck posted to batman bayesian chip-seq deconvolution epigenome genome-wide medip medip-seq methylome by sebastien_vigneau on 2009-03-19 15:21:29 as along with 9 people and 1 group fabrices druvus timhubbard mmartin rschulz bpcusack slevy03 oelemento guhjy KCL & UCL Bioinformatics
	Beyond odds ratios--communicating disease risk based on genetic profiles. [My Copy] Nature reviews. Genetics, Vol. 10, No. 4. (24 April 2009), pp. 264-269. by P. Kraft, S. Wacholder, M. C. Cornelis, et al.F. B. Hu, R. B. Hayes, G. Thomas, R. Hoover, D. J. Hunter, S. Chanock posted to association genome-wide review statistics by misonneh to the group Roswell Cancer Crosstalk on 2009-03-19 00:53:22 as along with 10 people zufar Zephyrus PabloMarin lwaldron pkonings roys daforerog psique rdiaz guhjy
	High-resolution profiling of histone methylations in the human genome. [My Copy] Cell, Vol. 129, No. 4. (18 May 2007), pp. 823-837. by Artem Barski, Suresh Cuddapah, Kairong Cui, et al.Tae-Young Y. Roh, Dustin E. Schones, Zhibin Wang, Gang Wei, Iouri Chepelev, Keji Zhao posted to chip-seq genome-wide h3k4me3 histone human methylation by jochenG on 2009-03-16 16:06:32 as along with 22 people and 2 groups rsaito darian tonamswish stubrown fpattyn hagechouchin443 absterga ewilban1 suizifish caseybrown raylim jernst giovenko guhjy kengg sebastien_vigneau jackjackjjj ghattem epigenetics ksha inesdesantiago dquest JLab Plantandetc
	The insulator binding protein CTCF positions 20 nucleosomes around its binding sites across the human genome. [My Copy] PLoS genetics, Vol. 4, No. 7. (25 July 2008), e1000138. by Yutao Fu, Manisha Sinha, Craig L. Peterson, Zhiping Weng posted to ctcf genome-wide nucleosome by sebastien_vigneau on 2009-03-03 19:11:04 as along with 8 people and 3 groups suizifish gderwin madreach polivares cisevol djkt clearbluespring inesdesantiago CTCF JLab BergmanLab
	HapMap methylation-associated SNPs, markers of germline DNA methylation, positively correlate with regional levels of human meiotic recombination [My Copy] Genome Research, Vol. 19, No. 4. (26 April 2009), pp. 581-589. by Martin I. Sigurdsson, Albert V. Smith, Hans T. Bjornsson, Jon J. Jonsson posted to association epigenetics genetics genome-wide methylation by misonneh to the group Roswell Cancer Crosstalk on 2009-02-27 08:46:07 as along with 6 people and 1 group fenghezi gderwin djkt xingxu guhjy rschulz Epigenetics
	Biostatistical aspects of genome-wide association studies. [My Copy] Biometrical journal. Biometrische Zeitschrift, Vol. 50, No. 1. (February 2008), pp. 8-28. by Andreas Ziegler, Inke R. König, John R. Thompson posted to association review statistics genome-wide by ptrobajo on 2009-02-20 14:44:21 as along with 5 people and 1 group daforerog buyske misonneh zufar guhjy MGEL Reading
	Chromatin domains in higher eukaryotes: insights from genome-wide mapping studies [My Copy] Chromosoma by Elzo de Wit, Bas van Steensel posted to chromatin damid genome-wide mapping sdm by skoch3 to the group Koch_Lab on 2009-02-09 03:41:40 as along with 3 people and 1 group polivares inesdesantiago sandersl JLab
	Prioritizing risk pathways: a novel association approach to searching for disease pathways fusing SNPs and pathways. [My Copy] Bioinformatics (Oxford, England), Vol. 25, No. 2. (15 January 2009), pp. 237-242. by Lina Chen, Liangcai Zhang, Yan Zhao, et al.Liangde Xu, Yukui Shang, Qian Wang, Wan Li, Hong Wang, Xia Li posted to association genome-wide pathway pathway-based snp by tg150 on 2009-02-03 06:01:33 as along with 8 people dolchan kimorley jfr zufar guhjy shikin imina pkonings
	Genome-wide association analyses of expression phenotypes [My Copy] Genetic Epidemiology, Vol. 31, No. S1. (2007), pp. S7-S11. by Gary K. Chen, Tian Zheng, John S. Witte, Ellen L. Goode, On posted to genome-wide microarrays by flavio48 to the group Visiting Position on 2009-01-28 11:18:14 as
	Ultraconservation identifies a small subset of extremely constrained developmental enhancers. [My Copy] Nat Genet (6 January 2008) by Axel Visel, Shyam Prabhakar, Jennifer A A. Akiyama, et al.Malak Shoukry, Keith D D. Lewis, Amy Holt, Ingrid Plajzer-Frick, Veena Afzal, Edward M M. Rubin, Len A A. Pennacchio posted to conserved-noncoding-sequences embryo enhancer genome-wide human in-silico mammal mouse transcription-factor-binding-site ultra-conserved by cisstem on 2009-01-23 10:39:36 as along with 6 people Stew maximilianh gjuggler emptyhb bpcusack isimpson

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chip	37
bioinformatics	29
arabidopsis	26
human	20
transcription	20
association	19
review	19
network	18
tfs	18
chromatin	15
histone	15
methylation	15
ctcf	14
nucleosome	13
yeast	13
rna	12
snps	12
evolution	11
binding	10
epigenetics	10
chip-seq	9
expression	9
interaction	9
chip-chip	8
disease-associated	8
genome	8
snp	8
analysis	7
enhancer	7
gene	7
genomics	7
histone_modification	7
phenotype	7
disease	6
dna-methylation	6
mapping	6
metabolite	6
microarray	6
mouse	6
promoter	6
drosophila	5
gene-expression	5
insulator	5
meiosis	5
microrna	5
organization	5
prediction	5
regulation	5
transcriptome	5
annotation	4
comments	4
cpg	4
genetic	4
genetics	4
genotype	4
gxe	4
mammal	4
motif	4
neuroticism	4
protein	4
replication	4
signature	4
solexa	4
system-biology	4
cell-type	3
dna	3
epigenetic	3
es	3
experiment	3
functional-genomics	3
methylome	3
omics-data	3
population	3
practice	3
rna_folding	3
root	3
sequence	3
sequencing	3
statistics	3
transcription-factor-binding-site	3
biochemical	2
comparative	2
complexity	2
cryptic	2
damid	2
dna_methylation	2
embryo	2
encode	2
eukariot	2
function	2
gene-regulation	2
haplotype	2
map	2
modular	2
nucleosomes	2
positioning	2
qtl	2
sdm	2
tor	2
transcription_factor	2

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