Tag hapmap [127 articles] Export

Recent papers classified by the tag hapmap.

	GLIDERS - A web-based search engine for genome-wide linkage disequilibrium between HapMap SNPs [My Copy] BMC Bioinformatics, Vol. 10, No. 1. (2009), 367. by Robert Lawrence, Aaron D. Williams, Richard Mott, John Broxholme, Lon Cardon, Eleftheria Zeggini posted to web-server snp hapmap genome-analysis by kshameer on 2009-11-06 08:42:09 as along with 1 person daforerog
	FstSNP-HapMap3: a database of SNPs with high population differentiation for HapMap3. [My Copy] Bioinformation, Vol. 3, No. 3. (2008), pp. 139-141. by Shiwei Duan, Wei Zhang, Nancy Jean J. Cox, Mary Eileen E. Dolan posted to hapmap by daed on 2009-10-28 10:42:04 as along with 1 person guhjy
	Expression differences by continent of origin point to the immortalization process [My Copy] Hum. Mol. Genet., Vol. 18, No. 20. (15 October 2009), pp. 3864-3875. by Adam R. Davis, Isaac S. Kohane posted to population microarray hapmap by xingxu on 2009-10-01 06:19:32 as
	Targeted capture and massively parallel sequencing of 12 human exomes [My Copy] Nature, Vol. 461, No. 7261. (16 August 2009), pp. 272-276. by Sarah B. Ng, Emily H. Turner, Peggy D. Robertson, et al.Steven D. Flygare, Abigail W. Bigham, Choli Lee, Tristan Shaffer, Michelle Wong, Arindam Bhattacharjee, Evan E. Eichler, Michael Bamshad, Deborah A. Nickerson, Jay Shendure posted to variant snp-discovery sequencing resequencing hapmap genetics exome disorder capture by n00c on 2009-09-28 15:20:55 as along with 20 people and 1 group chvlyl ongenetics psique fenghezi dswan jmanning2k torfinnnome GeeSharpMinor pkonings neils djkt daforerog PabloMarin stubrown danmaclean xingxu vplagnol druvus jandot frohike Journal picks
	An utter refutation of the \|[lsquo]\|Fundamental Theorem of the HapMap\|[rsquo]\| [My Copy] European Journal of Human Genetics, Vol. 14, No. 4. (15 February 2006), pp. 426-437. by Joseph D. Terwilliger, Tero Hiekkalinna posted to tag-snp indirect hapmap by guhjy on 2009-09-23 05:13:01 as along with 7 people Terkko balajis sometwo santi mbeautru jermth ryanraaum
	Genome-wide transcriptional profiling reveals microRNA-correlated genes and biological processes in human lymphoblastoid cell lines. [My Copy] PloS one, Vol. 4, No. 6. (11 June 2009), e5878. by Liang Wang, Ann L. Oberg, Yan W. Asmann, et al.Hugues Sicotte, Shannon K. McDonnell, Shaun M. Riska, Wanguo Liu, Clifford J. Steer, Subbaya Subramanian, Julie M. Cunningham, James R. Cerhan, Stephen N. Thibodeau posted to pbmc mirna ma hapmap company by guhjy on 2009-09-01 06:35:44 as along with 2 people daforerog ealloza
	Geographical affinities of the HapMap samples. [My Copy] PloS one, Vol. 4, No. 3. (2009) by Miao He, Jane Gitschier, Tatiana Zerjal, Peter de Knijff, Chris Tyler-Smith, Yali Xue posted to jpt hapmap geographical_affinities chb ceu autosomal admixture by Archaeogenetics on 2009-08-31 05:53:20 as along with 3 people mkotlyar daforerog miaohehe
	On quality control measures in genome-wide association studies: a test to assess the genotyping quality of individual probands in family-based association studies and an application to the HapMap data. [My Copy] PLoS genetics, Vol. 5, No. 7. (24 July 2009), e1000572. by David W. Fardo, Iuliana Ionita-Laza, Christoph Lange posted to quality-control hapmap gwas fbat by pkonings on 2009-08-14 10:18:27 as along with 2 people guhjy rdiaz
	The HapMap and genome-wide association studies in diagnosis and therapy. [My Copy] Annual review of medicine, Vol. 60, No. 1. (2009), pp. 443-456. by Teri A. Manolio, Francis S. Collins posted to gwa hapmap review by xingxu on 2009-08-06 19:16:30 as along with 4 people bwgoodman tschaus ilyashl guhjy
	Targeted screening of cis-regulatory variation in human haplotypes. [My Copy] Genome research, Vol. 19, No. 1. (24 January 2009), pp. 118-127. by D. J. Verlaan, B. Ge, E. Grundberg, et al.R. Hoberman, K. C. Lam, V. Koka, J. Dias, S. Gurd, N. W. Martin, H. Mallmin, O. Nilsson, E. Harmsen, K. Dewar, T. Kwan, T. Pastinen posted to eqtl hapmap pbmc snp by guhjy on 2009-07-25 14:37:45 as along with 5 people and 1 group alweber athma vplagnol Stew gruberjd Bioinformatics - CRUK
	Data structures and algorithms for analysis of genetics of gene expression with Bioconductor: GGtools 3.x [My Copy] Bioinformatics, Vol. 25, No. 11. (1 June 2009), pp. 1447-1448. by Vincent J. Carey, Adam R. Davis, Michael F. Lawrence, Robert Gentleman, Benjamin A. Raby posted to eqtl hapmap r by guhjy on 2009-07-18 04:02:01 as along with 5 people druvus nuin rdiaz djkt giovanni
	A HapMap harvest of insights into the genetics of common disease. [My Copy] The Journal of clinical investigation, Vol. 118, No. 5. (1 May 2008), pp. 1590-1605. by Teri A. Manolio, Lisa D. Brooks, Francis S. Collins posted to common_disease genetics gwas hapmap by psique on 2009-07-14 15:57:57 as along with 5 people daforerog galka8_diploma jsatkosk xingxu guhjy
	Relative Impact of Nucleotide and Copy Number Variation on Gene Expression Phenotypes [My Copy] Science, Vol. 315, No. 5813. (9 February 2007), pp. 848-853. by Barbara E. Stranger, Matthew S. Forrest, Mark Dunning, et al.Catherine E. Ingle, Claude Beazley, Natalie Thorne, Richard Redon, Christine P. Bird, Anna de Grassi, Charles Lee, Chris Tyler-Smith, Nigel Carter, Stephen W. Scherer, Simon Tavare, Panagiotis Deloukas, Matthew E. Hurles, Emmanouil T. Dermitzakis posted to datasets hapmap toread-2 by ilyashl on 2009-07-10 21:56:09 as along with 31 people and 5 groups lp2 daveGerrard sameersoi timhubbard Zephyrus ajbattle jonilaserson emptyhb buyske zufar koller waszak daed psique jo_davies srp33 guhjy jfr dpollard balicea rdiaz qfwills djkt vplagnol shigepong jlangdon xingxu cisevol caseybrown frohike jandot Roswell Cancer Crosstalk Visiting Position Bioinformatics EisenLab cis-regulatory-evolution
	Haploview: analysis and visualization of LD and haplotype maps. [My Copy] Bioinformatics (Oxford, England), Vol. 21, No. 2. (15 January 2005), pp. 263-265. by J. C. Barrett, B. Fry, J. Maller, M. J. Daly posted to hapmap by guhjy on 2009-06-24 03:02:09 as along with 4 people xingxu daforerog Ayest mailund
	Evidence for large inversion polymorphisms in the human genome from HapMap data [My Copy] Genome Res., Vol. 17, No. 2. (1 February 2007), pp. 219-230. by Vikas Bansal, Ali Bashir, Vineet Bafna posted to hapmap human inversion-paper inversions by APRegier on 2009-06-23 18:27:05 as along with 3 people and 3 groups Ayest brant dchughes EisenLab G4ID Genetics-of-Gambling
	Estimating coverage and power for genetic association studies using near-complete variation data [My Copy] Nat Genet, Vol. 40, No. 7. (July 2008), pp. 841-843. by Tushar R. Bhangale, Mark J. Rieder, Deborah A. Nickerson posted to hapmap linkage snp by jsatkosk on 2009-06-11 22:26:00 as along with 4 people pkonings guhjy caseybrown djkt
	The success of the genome-wide association approach: a brief story of a long struggle [My Copy] European Journal of Human Genetics, Vol. aop, No. current. by Ku C. Seng, Chia K. Seng posted to association cnv disease genome haplotype hapmap linkage snp wide by jsatkosk on 2009-06-09 18:52:38 as along with 2 people xingxu guhjy
	Genome-wide nucleotide-level mammalian ancestor reconstruction [My Copy] Genome Research, Vol. 18, No. 11. (10 November 2008), pp. 1829-1843. by Benedict Paten, Javier Herrero, Stephen Fitzgerald, et al.Kathryn Beal, Paul Flicek, Ian Holmes, Ewan Birney posted to hapmap by ilyashl on 2009-05-24 21:32:47 as along with 6 people gdb mhamada rschulz Neeperando gjuggler bpcusack
	Linkage Effects and Analysis of Finite Sample Errors in the HapMap. [My Copy] Human heredity, Vol. 68, No. 2. (9 April 2009), pp. 73-86. by Noah Zaitlen, Hyun Min Kang, Eleazar Eskin posted to hapmap by guhjy on 2009-05-06 07:16:47 as
	Global variation in copy number in the human genome [My Copy] Nature, Vol. 444, No. 7118. (23 November 2006), pp. 444-454. by Richard Redon, Shumpei Ishikawa, Karen R. Fitch, et al.Lars Feuk, George H. Perry, T. Daniel Andrews, Heike Fiegler, Michael H. Shapero, Andrew R. Carson, Wenwei Chen, Eun K. Cho, Stephanie Dallaire, Jennifer L. Freeman, Juan R. Gonzalez, Monica Gratacos, Jing Huang, Dimitrios Kalaitzopoulos, Daisuke Komura, Jeffrey R. MacDonald, Christian R. Marshall, Rui Mei, Lyndal Montgomery, Kunihiro Nishimura, Kohji Okamura, Fan Shen, Martin J. Somerville, Joelle Tchinda, Armand Valsesia, Cara Woodwark, Fengtang Yang, Junjun Zhang, Tatiana Zerjal, Jane Zhang, Lluis Armengol, Donald F. Conrad, Xavier Estivill, Chris Tyler-Smith, Nigel P. Carter, Hiroyuki Aburatani, Charles Lee, Keith W. Jones, Stephen W. Scherer, Matthew E. Hurles posted to cnv hapmap by guhjy on 2009-05-06 03:12:46 as along with 40 people and 7 groups lp2 ilyashl ajbattle darian jonilaserson jrvalcourt turnersd daforerog noushin Glires ivanek waszak jo_davies psique bpb jfr balajis pradiptaray dpollard mtagaya adepace aswin rdiaz qfwills ealloza vplagnol giovanni jeremymiller frohike vpschulz raiyar ramensky ccr azazello dbgrant colinveal xingxu srp33 Ema daed parkinson's disease references Bioinformatics EisenLab BioinfoCIPF GeschwindLab steinmetzlab MBLAB
	Consortium hopes to sequence genome of 1000 volunteers. [My Copy] BMJ (Clinical research ed.), Vol. 336, No. 7638. (2 February 2008) by J. Wise posted to datasets hapmap by ilyashl on 2009-05-05 00:05:06 as
	The SNPforID browser: an online tool for query and display of frequency data from the SNPforID project. [My Copy] International journal of legal medicine, Vol. 122, No. 5. (September 2008), pp. 435-440. by J. Amigo, C. Phillips, M. Lareu, A. Carracedo posted to hapmap snp by guhjy on 2009-04-29 11:01:20 as
	IGG3: a tool to rapidly integrate large genotype datasets for whole-genome imputation and individual-level meta-analysis [My Copy] Bioinformatics, Vol. 25, No. 11. (1 June 2009), pp. 1449-1450. by Miao-Xin Li, Lin Jiang, Patrick Y. Kao, Pak-C Sham, You-Qiang Song posted to hapmap imputation meta-analysis snp software stats by guhjy on 2009-04-29 10:59:36 as along with 4 people daforerog rdiaz jdbowes djkt
	High-resolution haplotype structure in the human genome. [My Copy] Nat Genet, Vol. 29, No. 2. (October 2001), pp. 229-232. by M. J. Daly, J. D. Rioux, S. F. Schaffner, T. J. Hudson, E. S. Lander posted to hapmap by ilyashl on 2009-04-26 15:43:09 as along with 3 people senseable-urb madhadron jermth
	Using HapMap Tools in Pharmacogenomic Discovery: The Thiopurine Methyltransferase Polymorphism [My Copy] Clin Pharmacol Ther, Vol. 81, No. 5. (28 February 2007), pp. 729-734. by T. S. Jones, W. Yang, W. E. Evans, M. V. Relling posted to drugdisc hapmap by ilyashl on 2009-04-26 14:55:31 as along with 2 people ansu guhjy
	A worldwide survey of haplotype variation and linkage disequilibrium in the human genome [My Copy] Nature Genetics, Vol. 38, No. 11. (22 October 2006), pp. 1251-1260. by Donald F. Conrad, Mattias Jakobsson, Graham Coop, et al.Xiaoquan Wen, Jeffrey D. Wall, Noah A. Rosenberg, Jonathan K. Pritchard posted to hapmap by ilyashl on 2009-04-24 13:13:29 as along with 5 people maren vplagnol ramensky jasonbobe ryanraaum
	Interpreting genetics of gene expression: integrative architecture in Bioconductor. [My Copy] Pacific Symposium on Biocomputing. Pacific Symposium on Biocomputing (2009), pp. 380-390. by V. J. Carey, R. Gentleman posted to bioconductor gwas hapmap snp-arrays software by jfr on 2009-04-20 10:40:37 as along with 1 person guhjy
	Calibrating a coalescent simulation of human genome sequence variation. [My Copy] Genome Res, Vol. 15, No. 11. (November 2005), pp. 1576-1583. by S. F. Schaffner, C. Foo, S. Gabriel, D. Reich, M. J. Daly, D. Altshuler posted to essential hapmap localize simulations by ilyashl on 2009-03-29 21:34:05 as along with 1 person and 1 group cgreal CGREL
	Recent acceleration of human adaptive evolution [My Copy] Proceedings of the National Academy of Sciences, Vol. 104, No. 52. (26 December 2007), pp. 20753-20758. by John Hawks, Eric T. Wang, Gregory M. Cochran, Henry C. Harpending, Robert K. Moyzis posted to hapmap selection by ilyashl on 2009-03-26 00:46:51 as along with 10 people and 3 groups yyfwuhan balicea hdopazo shoshin cannon qwermish wsjames coyotetraxx candypmcg hpaces BioinfoCIPF Oxford Virology Fasting, food and evolution
	PATTERNS OF HUMAN GENETIC DIVERSITY: Implications for Human Evolutionary History and Disease [My Copy] Annual Review of Genomics and Human Genetics, Vol. 4, No. 1. (2003), pp. 293-340. by Sarah A. Tishkoff, Brian C. Verrelli posted to hapmap reviews by ilyashl on 2009-03-26 00:40:57 as
	Hidden copy number variation in the HapMap population. [My Copy] Proceedings of the National Academy of Sciences of the United States of America, Vol. 105, No. 29. (22 July 2008), pp. 10067-10072. by J. C. Marioni, M. White, S. Tavaré, A. G. Lynch posted to bioinformatics cnv genomics hapmap methods by psique on 2009-03-19 16:55:55 as along with 5 people and 1 group Zephyrus jfr waszak guhjy Stew Roswell Cancer Crosstalk
	Use of weighted reference panels based on empirical estimates of ancestry for capturing untyped variation [My Copy] Human Genetics by Matthew Egyud, Zofia Gajdos, Johannah Butler, et al.Sam Tischfield, Loic Le Marchand, Laurence Kolonel, Christopher Haiman, Brian Henderson, Joel Hirschhorn posted to hapmap imputation snp by guhjy on 2009-03-17 01:58:48 as along with 1 person djkt
	How well do HapMap SNPs capture the untyped SNPs? [My Copy] BMC Genomics, Vol. 7 (19 September 2006), 238. by Erwin Tantoso, Yuchen Yang, Kuo-Bin Li posted to hapmap imputation by guhjy on 2009-03-17 01:58:36 as
	Estimating the number of unseen variants in the human genome. [My Copy] Proceedings of the National Academy of Sciences of the United States of America, Vol. 106, No. 13. (31 March 2009), pp. 5008-5013. by I. Ionita-Laza, C. Lange, N. M Laird posted to genetics hapmap imputation snp by guhjy on 2009-03-17 01:57:44 as along with 5 people jsatkosk giovanni TRHvidsten pkonings benjaminsb
	Methods for Human Demographic Inference Using Haplotype Patterns From Genome-wide SNP Data [My Copy] Genetics (2 March 2009), genetics.108.099275. by Kirk E. Lohmueller, Carlos D. Bustamante, Andrew G. Clark posted to hapmap by ilyashl on 2009-03-16 17:29:19 as along with 2 people sameersoi djkt
	HapMap methylation-associated SNPs, markers of germline DNA methylation, positively correlate with regional levels of human meiotic recombination [My Copy] Genome Research, Vol. 19, No. 4. (26 April 2009), pp. 581-589. by Martin I. Sigurdsson, Albert V. Smith, Hans T. Bjornsson, Jon J. Jonsson posted to hapmap methylation recombination by xingxu on 2009-03-12 14:30:48 as along with 6 people and 2 groups fenghezi gderwin djkt guhjy misonneh rschulz Roswell Cancer Crosstalk Epigenetics
	Utility of lymphoblastoid cell lines. [My Copy] Journal of neuroscience research (17 February 2009) by L Sie, S Loong, E K K. Tan posted to hapmap pbmc by guhjy on 2009-03-11 10:22:45 as
	High-resolution mapping of expression-QTLs yields insight into human gene regulation. [My Copy] PLoS genetics, Vol. 4, No. 10. (10 October 2008), e1000214. by J. B. Veyrieras, S. Kudaravalli, S. Y. Kim, et al.E. T. Dermitzakis, Y. Gilad, M. Stephens, J. K. Pritchard posted to eqtl hapmap pbmc by guhjy on 2009-03-11 09:59:54 as along with 8 people sameersoi athma bertrandservin xingxu lp2 larbiza caseybrown djkt
	Genetic Analysis of Human Traits In Vitro: Drug Response and Gene Expression in Lymphoblastoid Cell Lines [My Copy] PLoS Genet, Vol. 4, No. 11. (28 November 2008), e1000287. by Edwin Choy, Roman Yelensky, Sasha Bonakdar, et al.Robert M. Plenge, Richa Saxena, Philip L. De Jager, Stanley Y. Shaw, Cara S. Wolfish, Jacqueline M. Slavik, Chris Cotsapas, Manuel Rivas, Emmanouil T. Dermitzakis, Ellen Cahir-Mcfarland, Elliott Kieff, David Hafler, Mark J. Daly, David Altshuler posted to hapmap pbmc pharmacogenetics by guhjy on 2009-03-11 09:53:46 as along with 3 people sameersoi vplagnol caseybrown
	Susceptibility loci involved in cisplatin-induced cytotoxicity and apoptosis. [My Copy] Pharmacogenetics and genomics, Vol. 18, No. 3. (March 2008), pp. 253-262. by S. J. Shukla, S. Duan, J. A. Badner, X. Wu, M. E. Dolan posted to cisplatin hapmap pbmc snp by guhjy on 2009-03-11 09:43:40 as
	[Analysis and application of SNP and haplotype in the human genome] [My Copy] Yi chuan xue bao = Acta genetica Sinica, Vol. 32, No. 8. (August 2005), pp. 879-889. by J. Li, Y. C. Pan, Y. X. Li, T. L. Shi posted to hapmap by ilyashl on 2009-03-10 00:37:14 as
	Navigating the HapMap [My Copy] Brief Bioinform, Vol. 7, No. 3. (1 September 2006), pp. 211-224. by Michael R. Barnes posted to hapmap by ilyashl on 2009-03-10 00:36:20 as along with 2 people and 1 group daforerog guhjy Bioinformatics
	A second generation human haplotype map of over 3.1 million SNPs. [My Copy] Nature, Vol. 449, No. 7164. (18 October 2007), pp. 851-861. by The posted to hapmap by maren on 2009-03-06 23:06:34 as along with 16 people and 2 groups marywaye ilyashl daforerog diamantis Hans45 misonneh psique guhjy dchughes djkt lp2 ryanraaum xingxu jasonflannick skumagai mfm11 Bioinformatics parkinson's disease references
	The Structure of Haplotype Blocks in the Human Genome [My Copy] Science, Vol. 296, No. 5576. (21 June 2002), pp. 2225-2229. by Stacey B. Gabriel, Stephen F. Schaffner, Huy Nguyen, et al.Jamie M. Moore, Jessica Roy, Brendan Blumenstiel, John Higgins, Matthew DeFelice, Amy Lochner, Maura Faggart, Shau N. Liu-Cordero, Charles Rotimi, Adebowale Adeyemo, Richard Cooper, Ryk Ward, Eric S. Lander, Mark J. Daly, David Altshuler posted to hapmap human ld by maren on 2009-03-06 23:04:10 as along with 8 people and 1 group darian senseable-urb daforerog Zephyrus ilyashl misonneh buyske Ayest Roswell Cancer Crosstalk
	Transferability of tag SNPs in genetic association studies in multiple populations [My Copy] Nature Genetics, Vol. 38, No. 11. (22 October 2006), pp. 1298-1303. by Paul I. W. de Bakker, Noël P. Burtt, Robert R. Graham, et al.Candace Guiducci, Roman Yelensky, Jared A. Drake, Todd Bersaglieri, Kathryn L. Penney, Johannah Butler, Stanton Young, Robert C. Onofrio, Helen N. Lyon, Daniel O. Stram, Christopher A. Haiman, Matthew L. Freedman, Xiaofeng Zhu, Richard Cooper, Leif Groop, Laurence N. Kolonel, Brian E. Henderson, Mark J. Daly, Joel N. Hirschhorn, David Altshuler posted to gwas hapmap by maren on 2009-03-06 21:00:20 as along with 3 people daforerog ramensky jasonbobe
	Perspectives on human genetic variation from the HapMap Project. [My Copy] PLoS Genet, Vol. 1, No. 4. (October 2005) by G. McVean, C. C. Spencer, R. Chaix posted to gwas hapmap by maren on 2009-03-06 20:57:46 as along with 3 people and 1 group ashandanj mbeautru cat_worth structural_bioinformatics
	Sequence polymorphisms cause many false cis eQTLs. [My Copy] PloS one, Vol. 2, No. 7. (2007) by R. Alberts, P. Terpstra, Y. Li, R. Breitling, J. P. Nap, R. C. Jansen posted to bias eqtl hapmap by guhjy on 2009-03-06 04:08:21 as along with 3 people qfwills natstreet caseybrown
	A comprehensive evaluation of SNP genotype imputation. [My Copy] Human genetics, Vol. 125, No. 2. (March 2009), pp. 163-171. by Michael Nothnagel, David Ellinghaus, Stefan Schreiber, Michael Krawczak, Andre Franke posted to genetics hapmap imputation by guhjy on 2009-03-06 02:12:23 as along with 2 people djkt jdbowes
	Genotype-imputation accuracy across worldwide human populations. [My Copy] American journal of human genetics, Vol. 84, No. 2. (13 February 2009), pp. 235-250. by Lucy Huang, Yun Li, Andrew B. Singleton, et al.John A. Hardy, Gonçalo Abecasis, Noah A. Rosenberg, Paul Scheet posted to genetics gwa hapmap imputation by guhjy on 2009-03-06 02:11:53 as along with 2 people djkt pkonings
	Common genetic variants account for differences in gene expression among ethnic groups. [My Copy] Nat Genet (7 January 2007) by Richard S S. Spielman, Laurel A A. Bastone, Joshua T T. Burdick, Michael Morley, Warren J J. Ewens, Vivian G G. Cheung posted to hapmap pbmc snp by guhjy on 2009-03-04 10:08:22 as along with 9 people and 4 groups sameersoi lp2 aprasad balicea dchughes adepace vplagnol mgaldzic xingxu EisenLab G4ID CHIP Genetics-of-Gambling

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snp	45
pbmc	18
cnv	16
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tavare	1
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