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Tag homology_modeling [9 articles]

Recent papers classified by the tag homology_modeling.
  • Identification of protein sequence homology by consensus template alignment
    Journal of Molecular Biology, Vol. 188, No. 2. (20 March 1986), pp. 233-258.
    by WR Taylor
    posted to template sequence_analysis homology_modeling by rabio on 2007-02-02 17:29:36 as **
  • Generalized comparative modeling (GENECOMP): a combination of sequence comparison, threading, and lattice modeling for protein structure prediction and refinement.
    Proteins, Vol. 44, No. 2. (1 August 2001), pp. 133-149.
    by A Kolinski, MR Betancourt, D Kihara, P Rotkiewicz, J Skolnick
    posted to constraints homology_modeling knowledge-based_potentials replica_method strutcture_prediction threading by rabio on 2006-12-10 22:30:25 as read along with 1 person dgront
  • Five hierarchical levels of sequence-structure correlation in proteins.
    Applied Bioinformatics, Vol. 3, No. 2-3. (2004), pp. 97-104.
    by C Bystroff, Y Shao, X Yuan
    posted to sequence-structure_alignment protein_folding protein_assessment homology_modeling by rabio on 2007-01-30 16:46:56 as *** along with 2 people and 2 groups marcius eweaver BioinfoCIPF SGU-CIPF
  • Homology modeling using parametric alignment ensemble generation with consensus and energy-based model selection
    Nucleic Acids Research, Vol. 34, No. 17. (September 2006), e112.
    by Dylan Chivian, David Baker
    posted to homology_modeling parametric_alignment sequence_alignment suboptimal_alignment by rabio on 2007-03-02 16:15:05 as read along with 2 people jwm dgront
  • New insights about HERG blockade obtained from protein modeling, potential energy mapping, and docking studies
    Bioorganic & Medicinal Chemistry, Vol. 14, No. 9. (1 May 2006), pp. 3160-3173.
    by Ramy Farid, Tyler Day, Richard A Friesner, Robert A Pearlstein
    posted to docking herg homology_modeling by LamBras on 2008-04-07 15:25:44 as ** along with 1 person daevans
  • Loopholes and missing links in protein modeling.
    Protein Sci, Vol. 16, No. 9. (September 2007), pp. 1999-2012.
    by KA Rossi, CA Weigelt, A Nayeem, SR Krystek
    posted to homology_modeling by LamBras on 2008-08-14 14:36:48 as **** along with 1 person cdeane
  • On the Applicability of GPCR Homology Models to Computer-Aided Drug Discovery: A Comparison between In Silico and Crystal Structures of the β2-Adrenergic Receptor
    J. Med. Chem., Vol. 51, No. 10. (22 May 2008), pp. 2907-2914.
    by Stefano Costanzi
    posted to homology_modeling gpcr by LamBras on 2008-08-14 10:49:43 as *****
  • Homology Modeling with Low Sequence Identity
    Methods, Vol. 14, No. 3. (March 1998), pp. 293-300.
    by Anna Tramontano
    posted to biophysics homology_modeling by kdesmond on 2008-02-09 20:16:35 as **
  • Comparative protein structure modeling of genes and genomes.
    Annu Rev Biophys Biomol Struct, Vol. 29 (2000), pp. 291-325.
    by MA Marti-Renom, AC Stuart, A Fiser, R Sanchez, F Melo, A Sali
    posted to homology_modeling pfc2 review by insectopalo on 2007-10-10 17:54:08 as **** along with 12 people and 2 groups chad_davis granujilla IrinaMoreira min013 aalibes nigham ttjoseph marcius ffranca duartemolha dgront ruvido BioinfoCIPF SGU-CIPF
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