Tag information-extraction [194 articles] Export

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	Construction of an annotated corpus to support biomedical information extraction [My Copy] BMC Bioinformatics, Vol. 10, No. 1. (23 October 2009), 349. by Paul Thompson, Syed Iqbal, John McNaught, Sophia Ananiadou posted to syntax semantics semantic-roles information-extraction biomedical annotation by henk-cul to the group dbmi-nlp on 2009-10-28 18:23:48 as along with 3 people and 2 groups kshameer cisevol Effie BergmanLab NaCTeM
	Towards a context model driven german geo-tagging system [My Copy] In GIR '07: Proceedings of the 4th ACM workshop on Geographical information retrieval (2007), pp. 25-30. by Andre Blessing, Reinhard Kuntz, Hinrich Schütze posted to sequence-learning information-extraction geotagging disambiguation crf by trob on 2009-10-14 14:32:45 as along with 1 person mariusausterschulte
	Mining knowledge from text using information extraction [My Copy] SIGKDD Explor. Newsl., Vol. 7, No. 1. (June 2005), pp. 3-10. by Raymond J. Mooney, Razvan Bunescu posted to text-mining natural_language knowledge-engineering information-extraction by dmnapolitano to the group NLP on 2009-10-14 03:12:17 as along with 8 people and 2 groups ttylenda vlachmore Passerby unnonouno yas caomo AlisonBabeu imrchen T_lab AI
	Extraction of human kinase mutations from literature, databases and genotyping studies [My Copy] BMC Bioinformatics, Vol. 10, No. Suppl 8. (2009), S1. by Martin Krallinger, Jose Izarzugaza, Carlos R. Penagos, Alfonso Valencia posted to text-mining mutations information-extraction bioinformatics by mitko on 2009-10-09 12:07:48 as along with 1 person lmichan
	Towards An Adaptive Mail Classifier [My Copy] In Italian Association for Artificial Intelligence Workshop Su Apprendimento Automatico: Metodi Ed Applicazioni, Vol. 8 (2002) by Giuseppe Manco, Elio Masciari, Massimo Ruffolo, Andrea Tagarelli posted to text_mining text_categorization stroz-friedberg spam_filters information-extraction email data_mining_algorithms clustering classification by dmnapolitano on 2009-09-24 15:55:29 as
	A realistic assessment of methods for extracting gene/protein interactions from free text. [My Copy] BMC bioinformatics, Vol. 10, No. 1. (28 July 2009), 233. by Renata Kabiljo, Andrew B. Clegg, Adrian J. Shepherd posted to text-mining information-extraction evaluation bioinformatics by mitko on 2009-08-11 13:52:16 as along with 11 people and 4 groups henk-cul martingerner DTD102 satre farzanehs grahamc sjcockell sillitoe andrewclegg cisevol barriot dbmi-nlp Journal picks Orengo Group Journal Picks BergmanLab
	PLAN2L: a web tool for integrated text mining and literature-based bioentity relation extraction. [My Copy] Nucleic acids research, Vol. 37, No. Web Server issue. (1 July 2009) by M. Krallinger, C. Rodriguez-Penagos, A. Tendulkar, A. Valencia posted to bioinformatics information-extraction text-mining by mitko on 2009-07-27 10:59:10 as along with 2 people liblab guhjy
	Analyzing Entities and Topics in News Articles Using Statistical Topic Models [My Copy] Intelligence and Security Informatics, Vol. 3975 (January 2006), pp. 93-104. by David Newman, Chaitanya Chemudugunta, Padhraic Smyth, Mark Steyvers posted to distributional-similarity information-extraction ontologies by briordan on 2009-07-19 19:22:01 as along with 3 people and 1 group caporaso tkmosk codex biomedical-nlp
	Linking genes to literature: text mining, information extraction, and retrieval applications for biology [My Copy] Genome Biology, Vol. 9, No. Suppl 2. (2008), S8. by Martin Krallinger, Alfonso Valencia, Lynette Hirschman posted to bioinformatics information-extraction text-mining by mitko on 2009-07-08 10:27:17 as along with 13 people and 1 group artaban421 druvus satre daforerog liblab lmichan aberamanda henk-cul Alois guhjy dullhunk bouncingbudha goettl dbmi-nlp
	A reliability study for evaluating information extraction from radiology reports. [My Copy] Journal of the American Medical Informatics Association : JAMIA, Vol. 6, No. 2. (r 1999), pp. 143-150. by G. Hripcsak, G. J. Kuperman, C. Friedman, D. F. Heitjan posted to annotation experts generalizability information-extraction reference-standards reliability by henk-cul to the group dbmi-nlp on 2009-06-23 21:24:04 as along with 1 person brendano
	Named entity recognition through classifier combination [My Copy] In Proceedings of the seventh conference on Natural language learning at HLT-NAACL 2003 (2003), pp. 168-171. by Radu Florian, Abe Ittycheriah, Hongyan Jing, Tong Zhang posted to conll-2003 information-extraction named-entity-recognition natural-language-processing stroz-friedberg by dmnapolitano to the group NLP on 2009-06-19 22:38:27 as along with 4 people and 1 group thegoose guelke arafalov vlachmore Named Entity Recognition
	Summarization of noisy documents: a pilot study [My Copy] In Proceedings of the HLT-NAACL 03 on Text summarization workshop (2003), pp. 25-32. by Hongyan Jing, Daniel Lopresti, Chilin Shih posted to information-extraction noisy-data stroz-friedberg summarization unstructured-data by dmnapolitano to the group NLP on 2009-06-19 19:30:20 as
	Introduction to the CoNLL-2003 shared task: language-independent named entity recognition [My Copy] In Proceedings of the seventh conference on Natural language learning at HLT-NAACL 2003 (2003), pp. 142-147. by Erik, Fien De Meulder posted to conll-2003 information-extraction named-entity-recognition natural-language-processing stroz-friedberg by dmnapolitano on 2009-06-18 16:27:00 as along with 1 person vlachmore
	Named Entity Extraction From Speech [My Copy] In in Proceedings of DARPA Broadcast News Transcription and Understanding Workshop (1998), pp. 287-292. by Francis Kubala, Richard Schwartz, Rebecca Stone, Ralph Weischedel posted to information-extraction named-entity-recognition natural-language-processing noisy-data speech stroz-friedberg by dmnapolitano on 2009-06-18 16:15:51 as along with 3 people and 1 group marlar cholwich zzb3886 searchingspeech2010
	Named Entity Extraction from Noisy Input: Speech and OCR [My Copy] In In Proceedings of the 6th Applied Natural Language Processing Conference (2000), pp. 316-324. by David Miller, Sean Boisen, Richard Schwartz, Rebecca Stone, Ralph Weischedel posted to information-extraction named-entity-recognition noisy-data ocr speech stroz-friedberg unstructured-data by dmnapolitano on 2009-06-18 02:14:15 as along with 1 person avirr
	A System for Classifying Disease Co-morbidity Status from Medical Discharge Summaries Using Automated Hotspot and Negated Concept Detection. [My Copy] Journal of the American Medical Informatics Association : JAMIA (23 April 2009) by Kyle H. Ambert, Aaron M. Cohen posted to error-correcting-output-codes hot-spot-filtering i2b2 information-extraction obesity svm by henk-cul to the group dbmi-nlp on 2009-06-11 21:38:58 as
	Using Maximum Entropy Model to Extract Protein-Protein Interaction Information from Biomedical Literature [My Copy] Advanced Intelligent Computing Theories and Applications. With Aspects of Theoretical and Methodological Issues (2007), pp. 730-737. by Chengjie Sun, Lei Lin, Xiaolong Wang, Yi Guan posted to biomedical information-extraction machine-learning maximum-entropy ppi sentence-classification by henk-cul to the group dbmi-nlp on 2009-06-09 21:49:37 as
	Extracting Protein-Protein Interaction Information from Biomedical Text with SVM [My Copy] IEICE - Trans. Inf. Syst., Vol. E89-D, No. 8. (2006), pp. 2464-2466. by Tomohiro Mitsumori, Masaki Murata, Yasushi Fukuda, Kouichi Doi, Hirohumi Doi posted to biomedical information-extraction machine-learning ppi proteins svm by henk-cul to the group dbmi-nlp on 2009-06-09 21:47:06 as along with 2 people farzanehs satre
	Event extraction from biomedical papers using a full parser. [My Copy] Pac Symp Biocomput (2001), pp. 408-419. by A. Yakushiji, Y. Tateisi, Y. Miyao, J. Tsujii posted to biomedical information-extraction parsing by henk-cul to the group dbmi-nlp on 2009-06-08 17:59:09 as along with 3 people and 1 group vlachmore helliontroy yggdrasil biomedical-nlp
	Automated Semantic Indexing of Figure Captions to Improve Radiology Image Retrieval [My Copy] Journal of the American Medical Informatics Association, Vol. 16, No. 3., pp. 380-386. by C. E. Kahn, D. L. Rubin posted to image-retrieval information-extraction by mitko on 2009-06-03 10:38:35 as
	Information extraction from full text scientific articles: where are the keywords? [My Copy] BMC bioinformatics, Vol. 4, No. 1. (29 May 2003) by Parantu K. Shah, Carolina Perez-Iratxeta, Peer Bork, Miguel A. Andrade posted to extraction full information information-extraction keywords text text-mining by fisherp on 2009-05-31 20:21:46 as along with 13 people and 4 groups cisevol katja robert85 snuppepuppan Enro matzke miguel kuhn yas natsu helliontroy balex spinaltap526 BergmanLab ilps T_lab biomedical-nlp
	Learning ontological rules to extract multiple relations of genic interactions from text. [My Copy] International journal of medical informatics (22 April 2009) by Alain-Pierre P. Manine, Erick Alphonse, Philippe Bessières posted to biomedical genes ilp information-extraction ontologies rules by henk-cul to the group dbmi-nlp on 2009-05-18 16:43:04 as along with 1 person dullhunk
	Task-oriented Evaluation of Syntactic Parsers and Their Representations [My Copy] In Proceedings of ACL-08: HLT (June 2008), pp. 46-54. by Yusuke Miyao, Rune S\aetre, Kenji Sagae, Takuya Matsuzaki, Jun'ichi Tsujii posted to charniak-parser enju-parser information-extraction parsing proteins stanford-parser by henk-cul to the group dbmi-nlp on 2009-05-13 01:25:55 as along with 3 people vlachmore JeremyKahn satre
	Locating Complex Named Entities in Web Text [My Copy] In In Proc. of IJCAI (2007) by Doug Downey, Matthew Broadhead, Oren Etzioni posted to information-extraction by hehrig on 2009-05-04 14:14:18 as along with 3 people and 2 groups tsunol ianturton arafalov NLP Named Entity Recognition
	Open Information Extraction from the Web [My Copy] In IJCAI (2007), pp. 2670-2676. by Michele Banko, Michael J. Cafarella, Stephen Soderland, Matthew Broadhead, Oren Etzioni edited by Manuela M. Veloso, Manuela M. Veloso posted to information-extraction by hehrig on 2009-05-04 14:12:56 as along with 5 people klauso ianturton ttylenda lillejul kgajos
	Reading hidden intentions in the human brain. [My Copy] Current biology : CB, Vol. 17, No. 4. (20 February 2007), pp. 323-328. by John-Dylan D. Haynes, Katsuyuki Sakai, Geraint Rees, Sam Gilbert, Chris Frith, Richard E. Passingham posted to decoding goals information-extraction intentionality intentions justice-technologies self-reflectivity by Scis0000002 on 2009-04-26 10:18:05 as along with 9 people and 2 groups jmcarp nkishan sherdim touryanj sekulerlab manabu-s CharlesGaylord elv librain EPLab VisionLab
	Decoding reveals the contents of visual working memory in early visual areas [My Copy] Nature, Vol. 458, No. 7238. (18 February 2009), pp. 632-635. by Stephenie A. Harrison, Frank Tong posted to decoding information-extracting information-extraction memories visual working-memory by Scis0000002 on 2009-04-26 08:53:54 as along with 6 people chriswillmott chiimaino jmcarp flieder cvq FrankLeone
	Decoding mental states from brain activity in humans [My Copy] Nat Rev Neurosci, Vol. 7, No. 7. (July 2006), pp. 523-534. by John-Dylan Haynes, Geraint Rees posted to bcis brain-activities brain-models brain-reading consciousness decoding extracting hyperefficiency information-extracting information-extraction invariances logging mental-states thoughts user-modeling by Scis0000002 on 2009-04-26 08:32:20 as along with 24 people and 2 groups thorstenkranz flieder jmcarp szielke nkishan d-koester MEGfun jasonasm omneuron touryanj brian garyfeng sankaku kanair MichaelGaebler adick suizan dimatura librain cassandragould Torsten_Holmer schulz kristina bibay2004 ReadingLab VisionLab
	Hand movement direction decoded from MEG and EEG. [My Copy] J Neurosci, Vol. 28, No. 4. (23 January 2008), pp. 1000-1008. by S. Waldert, H. Preissl, E. Demandt, et al.C. Braun, N. Birbaumer, A. Aertsen, C. Mehring posted to 3d 6d activities bcis behavior-models behaviors bmis brain-activities brain-interfaces brain-machine-interfaces brain-models decoding eeg experiences information-extracting information-extraction intensions logging meg monitoring moving multimodal neuroethics noninvasive ontologies predicting real-time reconstructing tracking user-modeling wireless by Scis0000002 on 2009-04-25 18:17:35 as along with 1 person and 1 group MEGfun VisionLab
	Assigning roles to protein mentions: The case of transcription factors [My Copy] Journal of Biomedical Informatics, Vol. 42, No. 5. (10 October 2009), pp. 887-894. by Hui Yang, John Keane, Casey M. Bergman, Goran Nenadic posted to biomedical information-extraction keywords machine-learning named-entities parsing by henk-cul to the group dbmi-nlp on 2009-04-23 14:46:52 as along with 3 people druvus operon dullhunk
	OnTheFly: a tool for automated document-based text annotation, data linking and network generation [My Copy] Bioinformatics, Vol. 25, No. 7. (1 April 2009), pp. 977-978. by Georgios A. Pavlopoulos, Evangelos Pafilis, M. Kuhn, Sean D. Hooper, Reinhard Schneider posted to bioinformatics information-extraction software text-mining by mitko on 2009-04-02 13:40:37 as along with 9 people and 1 group robert85 Scis0000002 guhjy Effie zimbo1 dullhunk fgibson nuin renatomilani NaCTeM
	Information Extraction from Patients' Free Form Documentation [My Copy] In Biological, translational, and clinical language processing (June 2007), pp. 181-182. by Agnieszka Mykowiecka, Malgorzata Marciniak posted to clinical information-extraction by henk-cul on 2009-03-23 21:02:08 as along with 1 group dbmi-nlp
	Extracting Clinical Relationships from Patient Narratives [My Copy] In Proceedings of the Workshop on Current Trends in Biomedical Natural Language Processing (June 2008), pp. 10-18. by Angus Roberts, Robert Gaizauskas, Mark Hepple posted to clinical information-extraction by henk-cul on 2009-03-23 20:57:54 as along with 1 group dbmi-nlp
	Visual Image Reconstruction from Human Brain Activity using a Combination of Multiscale Local Image Decoders [My Copy] Neuron, Vol. 60, No. 5. (10 December 2008), pp. 915-929. by Y. Miyawaki, H. Uchida, O. Yamashita, et al.M. Sato, Y. Morito, H. Tanabe, N. Sadato, Y. Kamitani posted to activities bcis biotelemetry brain-interfaces brain-reading brain-theories decoders decoding extracting gabor-filters implants information-extracting information-extraction interfaces invariances monitoring multiscale neuroethics neurosemantics neurosemiotics percepting perception-models perception-theories recognition reconstructing remote-viewing scale-spaces semantics semiotics shape-theory shapes signal-complexity signal-processing synthetic-telepathy visual by Scis0000002 on 2009-02-23 10:37:16 as along with 7 people chiimaino FrankLeone Borelli manabu-s mijam touryanj Tominator
	Identifying respiratory findings in emergency department reports for biosurveillance using MetaMap. [My Copy] Medinfo, Vol. 11, No. Pt 1. (2004), pp. 487-491. by W. W. Chapman, M. Fiszman, J. N. Dowling, B. E. Chapman, T. C. Rindflesch posted to ed-notes information-extraction metamap by henk-cul on 2009-02-17 19:24:47 as along with 1 person route145
	Infoxtract: A customizable intermediate level information extraction engine [My Copy] In In Proceedings of the NAACL 2003 Workshop on Software Engineering and Architecture of Language Technology Systems (SEALTS, Vol. 12 (2003) by Rohini K. Srihari, Cymfony Inc, Wei Li, Cheng Niu, Thomas Cornell posted to domain-adaptation information-extraction by henk-cul on 2009-02-09 18:59:03 as along with 1 group dbmi-nlp
	Preemptive information extraction using unrestricted relation discovery [My Copy] In Proceedings of the main conference on Human Language Technology Conference of the North American Chapter of the Association of Computational Linguistics (2006), pp. 304-311. by Yusuke Shinyama, Satoshi Sekine posted to ie information-extraction relation-discovery sembysem by ifalk on 2009-02-04 11:41:04 as along with 3 people ttylenda julianpan AlisonBabeu
	Conditional random fields for entity extraction and ontological text coding [My Copy] Computational & Mathematical Organization Theory, Vol. 14, No. 3. (2008), pp. 248-262. by Jana Diesner, Kathleen Carley posted to crf information-extraction ontologies by briordan on 2009-02-02 16:15:04 as
	Foundations of statistical natural language processing [My Copy] (1999) by Christopher D. Manning, Hinrich Schütze posted to analysis annotation grundlage information-extraction parsing penn-treebank pos-tagging by hehrig on 2009-01-10 08:25:56 as along with 2 people davidbrooks fsteeg
	Mining clinical relationships from patient narratives. [My Copy] BMC bioinformatics, Vol. 9 Suppl 11 (2008) by Angus Roberts, Robert Gaizauskas, Mark Hepple, Yikun Guo posted to clinical information-extraction by henk-cul on 2008-12-22 15:38:07 as along with 2 people and 1 group irenas daforerog dbmi-nlp
	Evaluating contributions of natural language parsers to protein-protein interaction extraction [My Copy] Bioinformatics, Vol. 25, No. 3. (1 February 2009), pp. 394-400. by Yusuke Miyao, Kenji Sagae, Rune Saetre, Takuya Matsuzaki, Jun'ichi Tsujii posted to biomedical information-extraction parsing proteins by henk-cul on 2008-12-22 15:37:35 as along with 6 people and 2 groups RNawaz liblab Effie mstumpf behindtherabbit grahamc NaCTeM dbmi-nlp
	Automated information extraction of key trial design elements from clinical trial publications. [My Copy] AMIA ... Annual Symposium proceedings / AMIA Symposium. AMIA Symposium (2008), pp. 141-145. by B. de Bruijn, S. Carini, S. Kiritchenko, J. Martin, I. Sim posted to clinical-trial information-extraction by henk-cul on 2008-12-12 17:51:24 as along with 1 person and 1 group guhjy dbmi-nlp
	Geographical information recognition and visualization in texts written in various languages [My Copy] In SAC '04: Proceedings of the 2004 ACM symposium on Applied computing (2004), pp. 1051-1058. by Bruno Pouliquen, Ralf Steinberger, Camelia Ignat, Tom De Groeve posted to gazetteer geographic information-extraction by lisah2u on 2008-12-07 20:26:06 as along with 5 people krisl mshossain fukumori ianturton AlisonBabeu
	Mapping Biomedical Literature with WNT Signaling Pathway. [My Copy] AMIA ... Annual Symposium proceedings / AMIA Symposium. AMIA Symposium (2008) by K. E. Pena-Hernandez, W. K. Mahamaneerat, T. Kobayashi, C. R. Shyu, G. L. Arthur, C. W. Caldwell posted to biomedical information-extraction relation-extraction by henk-cul on 2008-11-25 14:55:09 as
	An integrated, conditional model of information extraction and coreference with application to citation matching [My Copy] In AUAI '04: Proceedings of the 20th conference on Uncertainty in artificial intelligence (2004), pp. 593-601. by Ben Wellner, Andrew Mccallum, Fuchun Peng, Michael Hay posted to conditional-random-fields information-extraction by mthomure on 2008-11-14 08:36:42 as along with 2 people vlachmore pdlug
	Automatic resource compilation by analyzing hyperlink structure and associated text [My Copy] In WWW7: Proceedings of the seventh international conference on World Wide Web 7 (1998), pp. 65-74. by Soumen Chakrabarti, Byron Dom, Prabhakar Raghavan, Sridhar Rajagopalan, David Gibson, Jon Kleinberg posted to information-extraction link-analysis by hazen on 2008-10-27 16:03:35 as along with 5 people and 1 group matteodellamico taho anon_pl kazama michaelmampaey ADMiRes
	Learning to extract relations for protein annotation. [My Copy] Bioinformatics (Oxford, England), Vol. 23, No. 13. (1 July 2007) by J. H. Kim, A. Mitchell, T. K. Attwood, M. Hilario posted to annotation information-extraction by yas on 2008-10-14 14:29:54 as along with 3 people and 2 groups eesruiz Effie robert85 ImagCom - Biomedical Text Computing NaCTeM
	Extraction of semantic biomedical relations from text using conditional random fields [My Copy] BMC Bioinformatics, Vol. 9, No. 1. (2008), 207. by Markus Bundschus, Mathaeus Dejori, Martin Stetter, Volker Tresp, Hans P. Kriegel posted to information-extraction ner by yas on 2008-10-14 12:09:21 as along with 9 people and 2 groups artaban421 Scis0000002 Effie svozil ogenex guhjy bundschu naegele TheresaNiederberger NaCTeM Bioinformatics
	Biobibliometrics: information retrieval and visualization from co-occurrences of gene names in Medline abstracts. [My Copy] Pacific Symposium on Biocomputing. Pacific Symposium on Biocomputing (2000), pp. 529-540. by B. J. Stapley, G. Benoit posted to co-occurnace information information-extraction information-retrieval medline pubmed text-mining by fisherp on 2008-10-09 15:50:55 as along with 1 person ctl
	PubMatrix: a tool for multiplex literature mining. [My Copy] BMC Bioinformatics, Vol. 4 (10 December 2003) by K. G. Becker, D. A. Hosack, G. Dennis, et al.R. A. Lempicki, T. J. Bright, C. Cheadle, J. Engel posted to information-extraction information-retrieval pubmed text-mining by fisherp on 2008-10-09 15:48:21 as along with 3 people and 1 group ianturton yas bertelsen T_lab

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text-mining	25
nlp	21
information-retrieval	15
review	15
biomedical	14
text	12
natural-language-processing	10
summarization	10
machine-learning	9
ontology	9
keyphrase-extraction	8
parsing	8
stroz-friedberg	8
crf	7
linguistics	7
annotation	6
bioinformatics	6
classification	6
decoding	6
lexical	6
ontologies	6
all	5
named-entity-recognition	5
proteins	5
bcis	4
data-mining	4
information-extracting	4
noisy-data	4
ppi	4
protein-protein-interactions	4
semantics	4
svm	4
web	4
activities	3
brain-models	3
brain-reading	3
clinical	3
conll-2003	3
document-processing	3
evaluation	3
extracting	3
file-import-09-04-28	3
grundlage	3
ie	3
information	3
invariances	3
keywords	3
my	3
natural-language	3
opinion-analysis	3
pattern-learning	3
reconstructing	3
semantic	3
semantic-roles	3
sentence-classification	3
unstructured-data	3
user-modeling	3
visual	3
access	2
behavior-models	2
behaviors	2
biomedical-literature	2
books	2
brain-activities	2
brain-interfaces	2
brain-theories	2
charniak-parser	2
co-occurnace	2
corpus-construction	2
disambiguation	2
enju-parser	2
experts	2
expression	2
extraction	2
full-text	2
generalization	2
genome	2
hmm	2
hot-spot-filtering	2
ilp	2
knowledge-engineering	2
layout-features	2
literature-based-discovery	2
maximum-entropy	2
monitoring	2
named-entities	2
natural_language	2
neuroethics	2
neurosemantics	2
pubmed	2
question-answering	2
reference-standards	2
regulation	2
relationship-extraction	2
rules	2
semantic-web	2
software	2
syntax	2
thoughts	2
web-mining	2

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