Tag insertion [49 articles] Export

Recent papers classified by the tag insertion.

	Insertion-deletion biases and the evolution of genome size. [My Copy] Gene, Vol. 324 (7 January 2004), pp. 15-34. by T. Ryan Gregory posted to insertion deletion by lusk on 2009-11-02 23:08:56 as along with 2 people aprasad brant
	Fast mapping of short sequences with mismatches, insertions and deletions using index structures. [My Copy] PLoS computational biology, Vol. 5, No. 9. (11 September 2009), e1000502. by Steve Hoffmann, Christian Otto, Stefan Kurtz, et al.Cynthia M. Sharma, Philipp Khaitovich, Jörg Vogel, Peter F. Stadler, Jörg Hackermüller posted to structures short sequence read mismatch mapping insertion index fast deletion by dswan to the group Bioinformatics on 2009-09-14 11:03:44 as along with 17 people and 3 groups darian nuin fenghezi behindtherabbit jandot walshtp torfinnnome stubrown polivares orzenil natstreet djkt jmcq n00c heliopais ppgardne druvus BergmanLab iSEEM Journal picks
	Kinetic Intermediate Reveals Staggered pH-Dependent Transitions along the Membrane Insertion Pathway of the Diphtheria Toxin T-Domain [My Copy] Biochemistry, Vol. 0, No. 0. (0000) by Alexander Kyrychenko, Yevgen O. Posokhov, Mykola V. Rodnin, Alexey S. Ladokhin posted to diphtheria insertion kyrych09pdf membrane pathway toxin by paulschlesinger on 2009-07-24 00:43:41 as
	Methods for generating precise deletions and insertions in the genome of wild-type Escherichia coli: application to open reading frame characterization. [My Copy] Journal of bacteriology, Vol. 179, No. 20. (1 October 1997), pp. 6228-6237. by A. J. Link, D. Phillips, G. M. Church posted to crossover deletion genome insertion replacement by fhsantanna on 2009-07-22 03:06:24 as along with 1 person rabu
	Free-energy determinants of alpha-helix insertion into lipid bilayers [My Copy] Vol. 70, No. 4. (1 April 1996), pp. 1803-1812. by N. Ben-Tal, A. Ben-Shaul, A. Nicholls, B. Honig posted to bental96pdf energy free helix insertion membrane by paulschlesinger on 2009-07-02 01:20:31 as
	The nature of the hydrophobic binding of small peptides at the bilayer interface: implications for the insertion of transbilayer helices [My Copy] Biochemistry, Vol. 28, No. 8. (1 April 1989), pp. 3421-3437. by Russell E. Jacobs, Stephen H. White posted to binding insertion jacobs89pdf membrane peptide by paulschlesinger on 2009-07-02 01:16:17 as
	A Continuum Method for Determining Membrane Protein Insertion Energies and the Problem of Charged Residues [My Copy] J. Gen. Physiol., Vol. 131, No. 6. (1 June 2008), pp. 563-573. by Seungho Choe, Karen A. Hecht, Michael Grabe posted to choe09pdf continuum energies insertion membrane model protein by paulschlesinger on 2009-06-30 00:43:06 as along with 2 people and 1 group superpyrin sobolevnrm baker-group
	Nucleotide sequence of IS26, a new prokaryotic mobile genetic etement [My Copy] Nucl. Acids Res., Vol. 11, No. 18. (24 September 1983), pp. 6319-6330. by Beat Mollet, Shigeru Iida, John Shepherd, Werner Arber posted to element insertion is is26 repeat sequence by katholt on 2009-06-21 13:30:25 as
	Estimating the frequency of events that cause multiple-nucleotide changes. [My Copy] Genetics, Vol. 167, No. 4. (August 2004), pp. 2027-2043. by S. Whelan, N. Goldman posted to deletion evolution insertion mutation nucleotide by robsyme on 2009-05-25 15:29:10 as along with 2 people michaelbarton gjuggler
	Extensive Proliferation of Transposable Elements in Heritable Bacterial Symbionts [My Copy] J. Bacteriol., Vol. 190, No. 2. (15 January 2008), pp. 777-779. by Gordon R. Plague, Helen E. Dunbar, Phat L. Tran, Nancy A. Moran posted to element insertion sequence transposable by nikkiwithers on 2009-05-05 12:49:20 as along with 1 person operon
	Periodic extinctions of transposable elements in bacterial lineages: evidence from intragenomic variation in multiple genomes. [My Copy] Molecular biology and evolution, Vol. 23, No. 4. (April 2006), pp. 723-733. by A. Wagner posted to extinction insertion sequence by nikkiwithers on 2009-05-03 11:05:39 as
	Genomic changes following host restriction in bacteria. [My Copy] Current opinion in genetics & development, Vol. 14, No. 6. (December 2004), pp. 627-633. by N. A. Moran, G. R. Plague posted to bacteria insertion sequence variation by nikkiwithers on 2009-05-03 11:04:15 as
	IS elements as constituents of bacterial genomes. [My Copy] Research in microbiology, Vol. 150, No. 9-10. (c 1999), pp. 675-687. by J. Mahillon, C. Léonard, M. Chandler posted to bacteria genome insertion sequence by nikkiwithers on 2009-05-03 11:00:50 as
	Truncated forms of IS911 transposase downregulate transposition [My Copy] Molecular Microbiology, Vol. 62, No. 4. (November 2006), pp. 1102-1116. by Gueguen, Erwan, Rousseau, et al. Philippe, Duval-Valentin, Guy, Chandler, Mick posted to insertion is911 sequence transposition by nikkiwithers on 2009-04-29 21:04:45 as
	Oxidation promotes insertion of the CLIC1 chloride intracellular channel into the membrane [My Copy] European Biophysics Journal by Sophia Goodchild, Michael Howell, Nicole Cordina, et al.Dene Littler, Samuel Breit, Paul Curmi, Louise Brown posted to clic1 goodch09pdf insertion membrane oxidation by paulschlesinger on 2009-04-28 01:20:24 as
	Repression of IS200 transposase synthesis by RNA secondary structures. [My Copy] Nucleic acids research, Vol. 27, No. 18. (15 September 1999), pp. 3690-3695. by C. R. Beuzón, S. Marqués, J. Casadesús posted to insertion regulation rna secondary sequence structure by nikkiwithers on 2009-04-13 10:07:55 as
	IS481 and IS1002 of Bordetella pertussis create a 6-base-pair duplication upon insertion at a consensus target site. [My Copy] Journal of bacteriology, Vol. 180, No. 18. (September 1998), pp. 4963-4966. by S. Stibitz posted to 6pb duplication insertion is481 of by nikkiwithers on 2009-04-13 09:43:23 as
	Insertion sequence duplication in transpositional recombination. [My Copy] Science (New York, N.Y.), Vol. 222, No. 4625. (18 November 1983), pp. 755-765. by T. A. Weinert, N. A. Schaus, N. D. Grindley posted to duplication insertion sequence by nikkiwithers on 2009-04-13 09:41:07 as
	Insertion sequences in prokaryotic genomes. [My Copy] Current opinion in microbiology, Vol. 9, No. 5. (October 2006), pp. 526-531. by P. Siguier, J. Filée, M. Chandler posted to genomes in insertion prokaryotic sequences by nikkiwithers on 2009-04-13 09:39:22 as
	Insertion sequences. [My Copy] Microbiology and molecular biology reviews : MMBR, Vol. 62, No. 3. (September 1998), pp. 725-774. by J. Mahillon, M. Chandler posted to good insertion sequences by nikkiwithers on 2009-04-13 09:37:27 as
	Causes of Insertion Sequences Abundance in Prokaryotic Genomes [My Copy] Mol Biol Evol, Vol. 24, No. 4. (1 April 2007), pp. 969-981. by Marie Touchon, Eduardo P. C. Rocha posted to abundance causes genomes insertion of prokaryotic sequence by nikkiwithers on 2009-04-13 09:33:36 as along with 3 people YukaH treangen operon
	Comparative analysis of RNA regulatory elements of amino acid metabolism genes in Actinobacteria. [My Copy] BMC microbiology, Vol. 5 (2005) by A. V. Seliverstov, H. Putzer, M. S. Gelfand, V. A. Lyubetsky posted to insertion regulation secondary sequence structure by nikkiwithers on 2009-04-13 09:32:25 as
	A three-way junction and constituent stem-loops as the stimulator for programmed -1 frameshifting in bacterial insertion sequence IS911. [My Copy] Journal of molecular biology, Vol. 286, No. 5. (12 March 1999), pp. 1365-1378. by C. C. Rettberg, M. F. Prère, R. F. Gesteland, J. F. Atkins, O. Fayet posted to frameshift insertion sequence stem-loop by nikkiwithers on 2009-04-13 09:18:39 as
	iMembrane: Homology-Based Membrane-Insertion of Proteins. [My Copy] Bioinformatics (Oxford, England) (23 February 2009) by Sebastian Kelm, Jiye Shi, Charlotte M M. Deane posted to insertion membrane protein by friendpine on 2009-04-10 01:35:28 as along with 2 people and 2 groups sebk oteri OPIG Structural Biology Group TorVergata
	Mapping useful GFP insertions; - evidence for local suppression of recombination [My Copy] Worm Breeder's Gazette, Vol. 16 (2001) by Jonathan Hodgkin, Alan Coulson, Patricia Kuwabara posted to factor insertion mapping three by ytseng18 on 2009-03-29 09:49:34 as along with 2 people and 1 group thegoose2 tharris C. elegans / WormBase
	Two-stage PCR protocol allowing introduction of multiple mutations, deletions and insertions using QuikChange Site-Directed Mutagenesis. [My Copy] Biotechniques, Vol. 26, No. 4. (April 1999), pp. 680-682. by W. Wang, B. A. Malcolm posted to insertion pcr proposal protocol by joseolucha on 2009-03-26 01:54:47 as
	Dissecting membrane insertion of mitochondrial beta-barrel proteins. [My Copy] Cell, Vol. 132, No. 6. (21 March 2008), pp. 1011-1024. by S. Kutik, D. Stojanovski, L. Becker, et al.T. Becker, M. Meinecke, V. Krüger, C. Prinz, C. Meisinger, B. Guiard, R. Wagner, N. Pfanner, N. Wiedemann posted to cardiolipin insertion kutik08pdf membrane protein by paulschlesinger on 2008-12-31 00:13:19 as
	Free-Energy Profiles of Membrane Insertion of the M2 Transmembrane Peptide from Influenza A Virus [My Copy] Biophys. J., Vol. 95, No. 11. (1 December 2008), pp. 5021-5029. by In-Chul Yeh, Mark A. Olson, Michael S. Lee, Anders Wallqvist posted to insertion membrane protein simulation yeh08pdf by paulschlesinger on 2008-11-20 00:43:43 as along with 1 person agrossfield
	Coarse-Grained Molecular Dynamics Simulations of the Energetics of Helix Insertion into a Lipid Bilayer [My Copy] Biochemistry (2 October 2008) by Peter J. Bond, Chze L. Wee, Mark S. Sansom posted to bond08pdf insertion membrane peptide simulation by paulschlesinger on 2008-10-03 01:11:50 as along with 3 people and 1 group sobolevnrm agrossfield sunhwan baker-group
	FCS Study of Thermodynamics of Membrane Protein Insertion into Lipid Bilayer Chaperoned by Fluorinated Surfactants [My Copy] Biophys. J. (15 August 2008), biophysj.108.141002. by Yevgen O. Posokhov, Mykola V. Rodnin, Somes K. Das, Bernard Pucci, Alexey S. Ladokhin posted to fcs fluorinated insertion membrane posok08pdf protein surfactants by paulschlesinger on 2008-08-16 01:04:51 as
	Poliovirus 2B insertion into lipid monolayers and pore formation in vesicles modulated by anionic phospholipids [My Copy] Biochimica et Biophysica Acta (BBA) - Biomembranes, Vol. In Press, Accepted Manuscript by Aitziber Agirre, Maier Lorizate, Shlomo Nir, José L. Nieva posted to foramtion insertion membrane peptides pore by paulschlesinger on 2008-06-27 01:09:45 as
	Insertion, Deletion Codes With Feature-Based Embedding: A New Paradigm for Watermark Synchronization With Applications to Speech Watermarking [My Copy] IEEE Transactions on Information Forensics and Security In Information Forensics and Security, IEEE Transactions on, Vol. 3, No. 2. (June 2008), pp. 153-165. by David J. Coumou, Gaurav Sharma posted to codes deletion feature-based insertion pitch speech synchronization watermark watermarking by fujiyoshi-masaaki on 2008-06-16 07:07:56 as along with 1 person lma32
	The hydrophobic insertion mechanism of membrane curvature generation by proteins [My Copy] Biophys. J. (30 May 2008), biophysj.108.133173. by Felix Campelo, Harvey T. Mcmahon, Michael M. Kozlov posted to campelo08pdf hydrophobic insertion protein by paulschlesinger on 2008-06-03 00:13:14 as along with 1 person agrossfield
	Membrane Insertion of the Bacillus thuringiensis Cry1Ab Toxin: Single Mutation in Domain II Block Partitioning of the Toxin into the Brush Border Membrane [My Copy] Biochemistry (6 May 2008) by Manoj S. Nair, Xinyan S. Liu, Donald H. Dean posted to cry1ab insertion membrane toxin by paulschlesinger on 2008-05-12 23:49:35 as
	Initial Binding Process of the Membrane Insertase YidC with Its Substrate Pf3 Coat Protein Is Reversible [My Copy] Biochemistry (6 May 2008) by Uwe Gerken, Dagmar Erhardt, Gerda Bär, Robin Ghosh, Andreas Kuhn posted to anisotropy binding fluorescence insertion membrane protein by paulschlesinger on 2008-05-12 20:09:55 as
	The economics of neurite outgrowth--the addition of new membrane to growing axons. [My Copy] Trends Neurosci, Vol. 19, No. 4. (April 1996), pp. 144-149. by A. H. Futerman, G. A. Banker posted to axon-growth insertion membrane review by adrianna on 2008-05-08 12:40:05 as along with 1 person lechristophe
	Sequence Context affects the rate of short insertions and deletions in flies and primates [My Copy] Genome Biology, Vol. 9 (21 February 2008), R37. by Amos Tanay, Eric D. Siggia posted to deletion insertion inside organization_paper by lusk on 2008-04-15 02:02:12 as along with 8 people emptyhb timflutre bpcusack djkt biomcgary gjuggler brant aprasad
	Gene function and expression level influence the insertion/fixation dynamics of distinct transposon families in mammalian introns [My Copy] Genome Biology, Vol. 7 (20 December 2006), R120. by Manuela Sironi, Giorgia Menozzi, Giacomo P. Comi, et al.Matteo Cereda, Rachele Cagliani, Nereo Bresolin, Uberto Pozzoli posted to families fixation insertion intron mammal transposon by paulcartwright to the group BergmanLab on 2008-03-26 12:39:42 as along with 2 people and 2 groups dchughes FMoncini G4ID Genetics-of-Gambling
	Fixation of conserved sequences shapes human intron size and influences transposon-insertion dynamics. [My Copy] Trends Genet, Vol. 21, No. 9. (September 2005), pp. 484-488. by M. Sironi, G. Menozzi, G. P. Comi, N. Bresolin, R. Cagliani, U. Pozzoli posted to human insertion intron transposon by paulcartwright to the group BergmanLab on 2008-03-26 12:30:56 as along with 2 people dchughes FMoncini
	Analysis of polypeptide movement in the SecY channel during SecA-mediated protein translocation [My Copy] J. Biol. Chem. (21 March 2008), M710356200. by Karl J. Erlandson, Eran Or, Andrew R. Osborne, Tom A. Rapoport posted to insertion sec by PRSteed on 2008-03-23 01:39:13 as along with 1 person choonpeng
	368: Central Line Emergency Access Registry: A Multi-Center Study to Determine Resident Competency With Central Venous Catheter Insertion [My Copy] Annals of Emergency Medicine In Annals of Emergency Medicine, American College of Emergency Physician's Research Forum, Vol. 50, No. 3, Supplement 1. (September 2007), S115. by A. Balls, F. Lovecchio, S. Stapczynski posted to central competence emergency insertion line multi-center resident venous catheter by simdoc on 2008-01-28 16:25:47 as
	Which transposable elements are active in the human genome? [My Copy] Trends Genet, Vol. 23, No. 4. (April 2007), pp. 183-191. by R. E. Mills, E. A. Bennett, R. C. Iskow, S. E. Devine posted to 23 bg cited herv insertion te by yoanjacquemin on 2008-01-16 10:48:25 as along with 4 people and 1 group bpb gpappas N0131826 cisevol BergmanLab
	$My PDF frackowiak_02_electrochemical.pdf$ Electrochemical storage of energy in carbon nanotubes and nanostructured carbons [My Copy] Carbon, Vol. 40, No. 10. (August 2002), pp. 1775-1787. by Elzbieta Frackowiak, Francois Beguin posted to insertion intercalation li-cells nanotubes by champignon74 on 2007-12-07 10:08:52 as along with 1 person hollemann
	Surface modification of pitch-based carbon fibre for the improvement of electrochemical lithium intercalation [My Copy] Journal of Electroanalytical Chemistry, Vol. 396, No. 1-2. (31 October 1995), pp. 451-455. by M. Kikuchi, Y. Ikezawa, T. Takamura posted to insertion intercalation li-cells by champignon74 on 2007-12-06 13:54:22 as
	Recent development of carbon materials for Li ion batteries [My Copy] Carbon, Vol. 38, No. 2. (2000), pp. 183-197. by M. Endo, C. Kim, K. Nishimura, T. Fujino, K. Miyashita posted to functionalisation insertion intercalation li-cells by champignon74 on 2007-12-06 09:29:49 as
	Oligomerization of membrane-bound diphtheria toxin (CRM197) facilitates a transition to the open form and deep insertion [My Copy] Biophys. J. (30 November 2007), biophysj.107.113498. by Michael Kent, Hyun Yim, Jaclyn Murton, Sushil Satija, Jaroslaw Majewski, Ivan Kuzmenko posted to binding insertion membrane pore toxin by paulschlesinger on 2007-12-04 23:49:03 as
	The Maize Genome Contains a Helitron Insertion [My Copy] Plant Cell, Vol. 15, No. 2. (1 February 2003), pp. 381-391. by Shailesh K. Lal, Michael J. Giroux, Volker Brendel, Eduardo C. Vallejos, Curtis L. Hannah posted to genomics helitron insertion maize plant by bsmagic on 2006-07-28 05:47:13 as along with 2 groups Bioinformatics bioinplant
	Insertion and Assembly of Membrane Proteins via Simulation. [My Copy] J Am Chem Soc, Vol. 128, No. 8. (1 March 2006), pp. 2697-2704. by P. J. Bond, M. S. Sansom posted to insertion membrane protein protocol by dimka on 2006-03-06 16:07:30 as along with 2 people choonpeng loison
	Occurrence and consequences of coding sequence insertions and deletions in Mammalian genomes. [My Copy] Genome Res, Vol. 14, No. 4. (April 2004), pp. 555-566. by M. S. Taylor, C. P. Ponting, R. R. Copley posted to coding_region deletion insertion by penka to the group Nie on 2006-02-03 08:23:51 as along with 3 people and 2 groups ana aprasad gjuggler structural_bioinformatics Bioinformatics

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membrane	16
sequence	13
deletion	8
protein	8
intron	4
transposon	4
binding	3
genomics	3
helitron	3
intercalation	3
li-cells	3
maize	3
mapping	3
plant	3
toxin	3
bacteria	2
duplication	2
element	2
families	2
fast	2
fixation	2
genome	2
genomes	2
human	2
index	2
mammal	2
mismatch	2
of	2
peptide	2
pore	2
prokaryotic	2
protocol	2
read	2
regulation	2
secondary	2
sequences	2
short	2
simulation	2
structure	2
structures	2
abundance	1
actin	1
anisotropy	1
bental96pdf	1
bg	1
campelo08pdf	1
catheter	1
central	1
choe09pdf	1
cited	1
clic1	1
coding_region	1
competence	1
diphtheria	1
emergency	1
energies	1
evolution	1
extinction	1
factor	1
fcs	1
feature-based	1
fluorinated	1
foramtion	1
free	1
glur1	1
good	1
goodch09pdf	1
hydrophobic	1
in	1
is26	1
is481	1
is911	1
jacobs89pdf	1
kutik08pdf	1
kyrych09pdf	1
ltp	1
multi-center	1
mutation	1
nanotubes	1
nucleotide	1
organization_paper	1
pathway	1
peptides	1
pitch	1
pkc	1
posok08pdf	1
proposal	1
replacement	1
resident	1
review	1
rna	1
sec	1
stem-loop	1
surfactants	1
te	1
variation	1
venous	1
watermark	1
watermarking	1
yeh08pdf	1

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