Tag intron [184 articles]

Recent papers classified by the tag intron.

	Evolutionary origin and functions of retrogene introns [My Copy] Mol Biol Evol (24 June 2009), msp125. by Marie Fablet, Manuel Bueno, Lukasz Potrzebowski, Henrik Kaessmann posted to retrogenes intron by clearbluespring on 2009-06-29 17:23:24 as
	Patterns and rates of intron divergence between humans and chimpanzees [My Copy] Genome Biology, Vol. 8 (19 February 2007), R21. by Elodie Gazave, Tomas Marques-Bonet, Olga Fernando, Brian Charlesworth, Arcadi Navarro posted to length intron gene evolution by robfsouza on 2009-06-16 23:30:18 as along with 5 people and 2 groups inesdesantiago nickluscombe lilou cisevol hdopazo EBI-regulation cis-regulatory-evolution
	Single nucleotide polymorphism (SNP) discovery in duplicated genomes: intron-primed exon-crossing (IPEC) as a strategy for avoiding amplification of duplicated loci in Atlantic salmon (Salmo salar) and other salmonid fishes [My Copy] BMC Genomics, Vol. 7 (27 July 2006), 192. by Heikki J. Ryynanen, Craig R. Primmer posted to snp sequence intron discovery cnv by jsatkosk on 2009-06-05 23:16:54 as along with 1 person Terkko
	Splicing of a rare class of introns by the U12-dependent spliceosome. [My Copy] Biological chemistry, Vol. 386, No. 8. (August 2005), pp. 713-724. by C. L. Will, R. Lührmann posted to u12 spliceosome review intron by diaz0058 on 2009-04-23 21:32:13 as
	Splicing segregation: the minor spliceosome acts outside the nucleus and controls cell proliferation. [My Copy] Cell, Vol. 131, No. 4. (16 November 2007), pp. 718-729. by H. König, N. Matter, R. Bader, W. Thiele, F. Müller posted to splicing mitosis minor intron cytoplasm by diaz0058 on 2009-04-23 21:26:56 as
	Profile analysis and prediction of tissue-specific CpG island methylation classes [My Copy] BMC Bioinformatics, Vol. 10, No. 1. (2009), 116. by Christopher Previti, Oscar Harari, Igor Zwir, Coral D. Val posted to intron dna-structure dna-methylation cpg-periodicity cpg cgi by rschulz on 2009-04-23 08:31:46 as along with 3 people dswan TRHvidsten reyez
	Biological function of unannotated transcription during the early development of Drosophila melanogaster [My Copy] Nature Genetics, Vol. 38, No. 10. (03 September 2006), pp. 1151-1158. by Robert J. Manak, Sujit Dike, Victor Sementchenko, et al.Philipp Kapranov, Frederic Biemar, Jeff Long, Jill Cheng, Ian Bell, Srinka Ghosh, Antonio Piccolboni, Thomas R. Gingeras posted to intron genome-organization by inesdesantiago on 2009-04-16 17:31:11 as along with 11 people and 7 groups roys ThomasDOtto daveGerrard GeeSharpMinor emptyhb dpollard neveaire djkt wrowell Stew xingxu BergmanLab Biostatistics Computational-Genomics Bioinformatics EisenLab Neuroscience Cline_lab
	Hard tick calreticulin (CRT) gene coding regions have only one intron with conserved positions and variable sizes. [My Copy] The Journal of parasitology, Vol. 91, No. 6. (December 2005), pp. 1326-1331. by G. Xu, Q. Q. Fang, Y. Sun, J. E. Keirans, L. A. Durden posted to molecular_analysis ixodes intron calreticulin by carpi on 2009-04-13 22:16:28 as
	Introns are necessary for mRNA accumulation in Schizophyllum commune. [My Copy] Molecular microbiology, Vol. 32, No. 4. (May 1999), pp. 681-689. by L. G. Lugones, K. Scholtmeijer, R. Klootwijk, J. G. Wessels posted to splicing schizophyllum posttranscriptional intron gene_regulation by stajich to the group Mycology on 2009-03-29 00:44:53 as
	Differential chromatin marking of introns and expressed exons by H3K36me3. [My Copy] Nature genetics (1 February 2009) by Paulina Kolasinska-Zwierz, Thomas Down, Isabel Latorre, Tao Liu, X Shirley S. Liu, Julie Ahringer posted to intron h3k36 by inesdesantiago on 2009-03-06 15:02:17 as along with 8 people and 1 group dpollard bpcusack absterga fenghezi Dulcinea dchughes djkt WanderingAengus RockmanLab
	Processing the H3K36me3 signature [My Copy] Nature Genetics, Vol. 41, No. 3., pp. 270-271. by Robert, Danny Reinberg posted to intron h3k36 exon chromatin by clearbluespring on 2009-03-05 18:23:31 as along with 4 people bpcusack fenghezi Dulcinea provero
	Characteristic differences between the promoters of intron-containing and intronless ribosomal protein genes in yeast. [My Copy] BMC research notes, Vol. 1 (2008) by J. Zhang, M. Vingron, S. Roepcke posted to yeast intron by cisevol on 2009-02-17 09:57:43 as
	Intron length and accelerated 3' gene evolution [My Copy] Genomics, Vol. 88, No. 6. (December 2006), pp. 682-689. by Clara S. Tang, Yong Z. Zhao, David K. Smith, Richard J. Epstein posted to intron evolution cryptic cpg correlations by inesdesantiago on 2009-02-16 01:03:21 as along with 2 people robfsouza aprasad
	Patterns of intron gain and conservation in eukaryotic genes [My Copy] BMC Evolutionary Biology, Vol. 7 (12 October 2007), 192. by Liran Carmel, Igor B. Rogozin, Yuri I. Wolf, Eugene V. Koonin posted to intron evolution by inesdesantiago on 2009-02-16 01:02:25 as along with 1 person seitentaisei
	Introns and their positions affect the translational activity of mRNA in plant cells. [My Copy] EMBO reports, Vol. 2, No. 5. (May 2001), pp. 394-398. by V. Bourdon, A. Harvey, D. M. Lonsdale posted to intron by rjlawren on 2009-02-13 22:28:59 as
	Mystery of intron gain: new data and new models [My Copy] Trends in Genetics, Vol. 25, No. 2. (February 2009), pp. 67-73. by Scott W. Roy, Manuel Irimia posted to review intron indel duplication by djkt on 2009-02-09 18:23:03 as
	The ClosTron: a universal gene knock-out system for the genus Clostridium. [My Copy] Journal of microbiological methods, Vol. 70, No. 3. (September 2007), pp. 452-464. by J. T. Heap, O. J. Pennington, S. T. Cartman, G. P. Carter, N. P. Minton posted to tools targetron mutant mutagenesis intron clostron clostridium by johntheap on 2009-02-04 15:09:37 as along with 1 person Winzer
	Genomic mapping of RNA polymerase II reveals sites of co-transcriptional regulation in human cells. [My Copy] Genome Biol, Vol. 6, No. 8. (2005) by A. S. Brodsky, C. A. Meyer, I. A. Swinburne, et al.G. Hall, B. J. Keenan, X. S. Liu, E. A. Fox, P. A. Silver posted to wide_mapping polymerase intron coordination by inesdesantiago on 2009-01-06 16:11:20 as along with 1 person and 1 group johncumbers Bioinformatics
	Intron length increases oscillatory periods of gene expression in animal cells. [My Copy] Genes & development (14 August 2008) by Ian A A. Swinburne, David G G. Miguez, Dirk Landgraf, Pamela A A. Silver posted to intron bursting by inesdesantiago on 2009-01-06 12:02:45 as along with 2 people and 1 group brant stajich Mycology
	Intron delays and transcriptional timing during development. [My Copy] Developmental cell, Vol. 14, No. 3. (March 2008), pp. 324-330. by I. A. Swinburne, P. A. Silver posted to intron differentiation by inesdesantiago on 2009-01-06 12:01:39 as along with 1 person and 1 group daveGerrard BergmanLab
	Where Do Introns Come From? [My Copy] PLoS Biology, Vol. 6, No. 11. (1 November 2008), e283. by Francesco Catania, Michael Lynch posted to intron by GustavoLacerda on 2009-01-05 15:49:21 as along with 13 people and 3 groups azazello stajich myzhang andreasapostolides alipi Zephyrus natstreet druvus dchughes clearbluespring djkt barry xianjun Mycology R.E.A.D McCammon
	A single-molecule study of RNA catalysis and folding. [My Copy] Science, Vol. 288, No. 5473. (16 June 2000), pp. 2048-2051. by X. Zhuang, L. E. Bartley, H. P. Babcock, et al.R. Russell, T. Ha, D. Herschlag, S. Chu posted to smfret ribozyme intron by lukzky on 2008-12-30 19:13:50 as along with 3 people toerst haisent yusdi
	Targeted inactivation of francisella tularensis genes by group II introns. [My Copy] Applied and environmental microbiology, Vol. 74, No. 9. (May 2008), pp. 2619-2626. by S. A. Rodriguez, J. J. Yu, G. Davis, B. P. Arulanandam, K. E. Klose posted to intron gene francisella by druvus on 2008-11-27 08:18:05 as along with 1 person austin
	Evolutionary Convergence on Highly-Conserved 3′ Intron Structures in Intron-Poor Eukaryotes and Insights into the Ancestral Eukaryotic Genome [My Copy] PLoS Genet, Vol. 4, No. 8. (2008), e1000148. by Manuel Irimia, Scott W. Roy posted to splicing intron evolution cryptic by inesdesantiago on 2008-11-25 15:10:07 as along with 1 person djkt
	An intronic microRNA silences genes that are functionally antagonistic to its host gene [My Copy] Nucl. Acids Res. (6 August 2008), gkn513. by Sailen Barik posted to microrna intron by inesdesantiago on 2008-11-25 14:48:20 as along with 6 people and 1 group heliopais bpcusack megraw daforerog bootsy maralena microRNA
	Current topics in genome evolution: Molecular mechanisms of new gene formation [My Copy] Cellular and Molecular Life Sciences (CMLS), Vol. 64, No. 5. (14 March 2007), pp. 542-554. by D. Babushok, E. Ostertag, H. Kazazian posted to splicing intron by GustavoLacerda on 2008-11-23 21:52:31 as along with 2 people and 1 group stajich jandot Mycology
	The "Alternative" Choice of Constitutive Exons throughout Evolution. [My Copy] PLoS Genet, Vol. 3, No. 11. (16 November 2007) by Galit Lev-Maor, Amir Goren, Noa Sela, et al.Eddo Kim, Hadas Keren, Adi Doron-Faigenboim, Shelly Leibman-Barak, Tal Pupko, Gil Ast posted to splicing intron by GustavoLacerda on 2008-11-23 21:50:11 as along with 4 people and 2 groups noasela sebastien_vigneau stajich bpcusack Computational-Genomics Mycology
	Isoform switching facilitates period control in the Neurospora crassa circadian clock. [My Copy] Mol Syst Biol, Vol. 4 (2008) by Ozgur E E. Akman, James C W C. Locke, Sanyi Tang, Isabelle Carré, Andrew J J. Millar, David A A. Rand posted to splicing intron by GustavoLacerda on 2008-11-23 21:49:40 as along with 1 person and 1 group stajich Mycology
	Rare Genomic Characters Do Not Support Coelomata: Intron Loss/Gain [My Copy] Mol Biol Evol, Vol. 25, No. 4. (1 April 2008), pp. 620-623. by Scott W. Roy, Manuel Irimia posted to phylogeny intron ecdysozoa coelomata by fridab on 2008-11-11 12:15:44 as along with 1 person cmzmasek
	Resolution of a deep animal divergence by the pattern of intron conservation [My Copy] PNAS, Vol. 102, No. 12. (22 March 2005), pp. 4403-4408. by Scott W. Roy, Walter Gilbert posted to phylogeny intron ecdysozoa coelomata by fridab on 2008-11-11 12:07:21 as along with 2 people smit2jam stajich
	The effect of intron length on exon creation ratios during the evolution of mammalian genomes. [My Copy] RNA (New York, N.Y.) (16 September 2008) by Meenakshi Roy, Namshin Kim, Yi Xing, Christopher Lee posted to splicing intron evolution by inesdesantiago on 2008-11-10 12:30:37 as along with 2 people samgj sebastien_vigneau
	Using Alu Elements as Polyadenylation Sites: A Case of Retroposon Exaptation [My Copy] Mol Biol Evol, Vol. 26, No. 2. (1 February 2009), pp. 327-334. by Chongjian Chen, Takeshi Ara, Daniel Gautheret posted to repeat polyadenylation intron alu alt-polya by rschulz on 2008-11-10 09:42:08 as along with 2 people andreasapostolides dchughes
	Conservation of the protein composition and electron microscopy structure of Drosophila Melanogaster and human spliceosomal complexes [My Copy] Mol. Cell. Biol. (3 November 2008), MCB.01415-08. by Nadine Herold, Cindy L. Will, Elmar Wolf, Berthold Kastner, Henning Urlaub, Reinhard Luhrmann posted to sr spliceosome length intron hnrnp fly em by cajunsushi on 2008-11-07 20:36:50 as
	Structural basis for exon recognition by a group II intron. [My Copy] Nature structural & molecular biology (26 October 2008) by Navtej Toor, Kanagalaghatta Rajashankar, Kevin S S. Keating, Anna Marie M. Pyle posted to structure intron gene exon by operon on 2008-11-04 16:25:25 as
	Intronic Alus Influence Alternative Splicing [My Copy] PLoS Genet, Vol. 4, No. 9. (2008), e1000204. by Galit Lev-Maor, Oren Ram, Eddo Kim, et al.Noa Sela, Amir Goren, Erez Y. Levanon, Gil Ast posted to transposon transcription splicing intron expression by operon on 2008-11-04 10:18:04 as along with 3 people and 1 group noasela aprasad djkt Computational-Genomics
	β-Globin LCR and Intron Elements Cooperate and Direct Spatial Reorganization for Gene Therapy [My Copy] PLoS Genet, Vol. 4, No. 4. (18 April 2008), e1000051. by Alla Buzina, Mandy Y. Lo, Angela Moffett, et al.Akitsu Hotta, Eden Fussner, Rikki R. Bharadwaj, Peter Pasceri, Victor J. Garcia-Martinez, David P. Bazett-Jones, James Ellis posted to therapy locus-position intron by inesdesantiago on 2008-10-24 13:36:27 as
	Spatial mapping of splicing factor complexes involved in exon and intron definition [My Copy] J. Cell Biol., Vol. 181, No. 6. (16 June 2008), pp. 921-934. by Jonathan D. Ellis, David Lleres, Marco Denegri, Angus I. Lamond, Javier F. Caceres posted to splicing intron by inesdesantiago on 2008-09-18 14:42:55 as
	Alternative splicing in the human, mouse and rat genomes is associated with an increased frequency of exon creation and/or loss. [My Copy] Nat Genet, Vol. 34, No. 2. (June 2003), pp. 177-180. by B. Modrek, C. J. Lee posted to splicing intron by inesdesantiago on 2008-09-18 14:28:21 as along with 2 people radek frohike
	The spliceosomal snRNAs of Caenorhabditis elegans. [My Copy] Nucleic Acids Research, Vol. 18 (1990), pp. 2633-2642. by K. Lea, E. Zucker-Aprison, T. E. Blumenthal, J. Thomas posted to wormbase transcription_genetic rna_splicing rna_small_nuclear_genetics rna_processing restriction_mapping restriction_map promoter_regions_genetics nucleic_acid_conformation nematode molecular_sequence_data intron immunoblotting genes_reiterated genes gene_family elegans dna_sequence cloning_molecular cloned_genes celegans caenorhabditis_genetics caenorhabditis_elegans c_elegans base_sequence article by tharris to the group C. elegans / WormBase on 2008-09-16 20:38:12 as along with 1 person thegoose2
	Information content of Caenorhabditis elegans splice site sequences varies with intron length. [My Copy] Nucleic Acids Research, Vol. 18 (1990), pp. 1509-1512. by C. A. Fields posted to wormbase rna_splicing rna_processing nematode molecular_sequence_data introns intron information_systems elegans dna_sequence celegans caenorhabditis_genetics caenorhabditis_elegans c_elegans base_sequence article by tharris to the group C. elegans / WormBase on 2008-09-16 20:33:34 as along with 1 person thegoose2
	Splicing of a C. elegans myosin pre-mRNA in a human nuclear extract. [My Copy] Nucleic Acids Research, Vol. 18 (1990), pp. 143-149. by S. C. Ogg, P. Anderson, M. P. Wickens posted to zc1012 wormbase unc-54 unc-52 transcription-in_vit species_specificity rna_splicing rna_processing rna_messenger_genetics nucleic_acid_precursors_genetics nematode myosin_genetics muscle-myosin molecular_sequence_data kinetics intron f11c33 exons elegans comp-vertebrate cloned_genes cell_nucleus_physiology cell_free_system celegans caenorhabditis_genetics caenorhabditis_elegans c_elegans base_sequence article by tharris to the group C. elegans / WormBase on 2008-09-16 20:26:49 as along with 1 person thegoose2
	Sequence comparisons of developmentally regulated collagen genes of Caenorhabditis elegans. [My Copy] Gene, Vol. 76 (1989), pp. 331-344. by G. N. Cox, J. M. Kramer, D. I. Hirsh, C. A. Fields, W. D. Rosenzweig posted to zk12903 zk11931 wormbase w01b67 sqt-3 sequence_homology_nucleic_acid rol-8 protein_conformation promoter_regions_genetics nematode molecular_sequence_data introns intron genes_structural genes_reiterated gene_family gene_expression_regulation f23h124 f11h83 elegans dna_sequence dna collagen_genetics collagen col-8 col-7 col-5 col-2 col-19 col-14 codon_genetics cloning_molecular cloned_genes celegans caenorhabditis_growth_and_development caenorhabditis_genetics caenorhabditis_elegans c_elegans c46a53 c15a115 base_sequence article amino_acid_sequence by tharris to the group C. elegans / WormBase on 2008-09-16 20:08:13 as along with 1 person thegoose2
	Cis and trans mRNA splicing in C. elegans. [My Copy] Trends in Genetics, Vol. 4 (1988), pp. 305-308. by T. E. Blumenthal, J. Thomas posted to wormbase rna_processing review nematode intron evolution elegans celegans caenorhabditis_elegans c_elegans by tharris to the group C. elegans / WormBase on 2008-09-16 20:00:01 as along with 1 person thegoose2
	Domain organization and intron positions in Caenorhabditis elegans collagen genes: The 54-bp module hypothesis revisited. [My Copy] Journal of Molecular Evolution, Vol. 28 (1989), pp. 55-63. by C. A. Fields posted to zk12903 zk11931 wormbase w01b67 sqt-3 rol-8 nematode intron gene_family f23h124 f11h83 evolution elegans comp-vertebrate collagen col-8 col-7 col-2 col-19 col-14 celegans caenorhabditis_elegans c_elegans c46a53 c15a115 article amino_acid_sequence by tharris to the group C. elegans / WormBase on 2008-09-16 19:59:14 as along with 1 person thegoose2
	Expression of intron-containing C. elegans heat shock genes in mouse cells demonstrates divergence of 3' splice site recognition sequences between nema/ [My Copy] Nucleic Acids Research, Vol. 15 (1987), pp. 3723-3741. by R. J. Kay, R. H. Russnak, D. Jones, C. Mathias, E. P. M. Candido posted to wormbase rna_processing nematode intron heat_shock elegans cloned_genes celegans caenorhabditis_elegans c_elegans article by tharris to the group C. elegans / WormBase on 2008-09-16 19:34:45 as along with 1 person thegoose2
	Isolation and characterization of C. elegans DNA sequences homologous to the v-abl oncogene. [My Copy] Proceedings of the National Academy of Sciences USA, Vol. 83 (1986), pp. 2172-2176. by J. M. Goddard, J. J. Weiland, M. R. Capecchi posted to wormbase restriction_map nematode intron elegans dna_sequence dna_homology cloned_genes celegans caenorhabditis_elegans c_elegans article amino_acid_sequence by tharris to the group C. elegans / WormBase on 2008-09-16 19:21:06 as along with 1 person thegoose2
	Intron positions are conserved in the 5' end region of myosin heavy-chain genes. [My Copy] Journal of Biological Chemistry, Vol. 260 (1985), pp. 468-471. by E. E. Strehler, V. Mahdavi, M. Periasamy, B. Nadal-Ginard posted to wormbase unc-54 nematode muscle-myosin intron f11c33 elegans dna_sequence dna_homology comp-vertebrate celegans caenorhabditis_elegans c_elegans article amino_acid_sequence by tharris to the group C. elegans / WormBase on 2008-09-16 19:01:35 as along with 1 person thegoose2
	Structural implications of the myosin amino acid sequence. [My Copy] Annual Review of Biophysics & Bioengineering, Vol. 13 (1984), pp. 167-189. by A. D. Mclachlan posted to wormbase unc-54 review nematode myofilaments muscle-myosin intron f11c33 elegans comp-vertebrate celegans caenorhabditis_elegans c_elegans amino_acid_sequence by tharris to the group C. elegans / WormBase on 2008-09-16 18:52:21 as along with 1 person thegoose2
	Protein structural domains in the C. elegans unc-54 myosin heavy chain gene are not separated by introns. [My Copy] Proceedings of the National Academy of Sciences USA, Vol. 80 (1983), pp. 4253-4257. by J. Karn, S. Brenner, L. Barnett posted to wormbase unc-54 nematode muscle-myosin intron f11c33 elegans dna_sequence comp-vertebrate cloned_genes celegans caenorhabditis_elegans c_elegans article amino_acid_sequence by tharris to the group C. elegans / WormBase on 2008-09-16 18:36:34 as along with 1 person thegoose2
	Intron Presence-Absence Polymorphisms in Daphnia [My Copy] Mol Biol Evol, Vol. 25, No. 10. (1 October 2008), pp. 2129-2139. by Angela R. Omilian, Douglas G. Scofield, Michael Lynch posted to population_genetics intron_loss intron_gain intron_evolution intron by stajich to the group Mycology on 2008-09-13 07:38:14 as along with 1 person bpcusack

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