Tag maqc [27 articles] Export Sort

Recent papers classified by the tag maqc.

Hide details

	The development of a comparison approach for Illumina bead chips unravels unexpected challenges applying newest generation microarrays. [My Copy] BMC bioinformatics, Vol. 10, No. 1. (2009), 186. by Daniela Eggle, Svenja Debey-Pascher, Marc Beyer, Joachim L. Schultze posted to quality_control maqc illumina by jfr on 2009-12-21 14:20:34 as along with 1 person and 2 groups dswan Bioinformatics Journal picks
	Performance comparison of one-color and two-color platforms within the Microarray Quality Control (MAQC) project [My Copy] Nature Biotechnology, Vol. 24, No. 9. (08 September 2006), pp. 1140-1150. by Tucker A. Patterson, Edward K. Lobenhofer, Stephanie B. Fulmer-Smentek, et al.Patrick J. Collins, Tzu-Ming Chu, Wenjun Bao, Hong Fang, Ernest S. Kawasaki, Janet Hager, Irina R. Tikhonova, Stephen J. Walker, Liang Zhang, Patrick Hurban, Francoise de Longueville, James C. Fuscoe, Weida Tong, Leming Shi, Russell D. Wolfinger posted to quality-control microarray-data-analysis maqc by frohike on 2009-12-16 16:51:54 as along with 5 people rdiaz jfr cberry ghattem giovenko
	The balance of reproducibility, sensitivity, and specificity of lists of differentially expressed genes in microarray studies. [My Copy] BMC bioinformatics, Vol. 9 Suppl 9, No. Suppl 9. (2008), S10. by Leming Shi, Wendell D. Jones, Roderick V. Jensen, et al.Stephen C. Harris, Roger G. Perkins, Federico M. Goodsaid, Lei Guo, Lisa J. Croner, Cecilie Boysen, Hong Fang, Feng Qian, Shashi Amur, Wenjun Bao, Catalin C. Barbacioru, Vincent Bertholet, Xiaoxi Megan M. Cao, Tzu-Ming M. Chu, Patrick J. Collins, Xiao-Hui H. Fan, Felix W. Frueh, James C. Fuscoe, Xu Guo, Jing Han, Damir Herman, Huixiao Hong, Ernest S. Kawasaki, Quan-Zhen Z. Li, Yuling Luo, Yunqing Ma, Nan Mei, Ron L. Peterson, Raj K. Puri, Richard Shippy, Zhenqiang Su, Yongming Andrew A. Sun, Hongmei Sun, Brett Thorn, Yaron Turpaz, Charles Wang, Sue Jane J. Wang, Janet A. Warrington, James C. Willey, Jie Wu, Qian Xie, Liang Zhang, Lu Zhang, Sheng Zhong, Russell D. Wolfinger, Weida Tong posted to differentially-expressed-genes t-test quality-control microarray-data-analysis microarray-data maqc fold-change by frohike on 2009-12-09 13:43:53 as along with 21 people and 1 group bertelsen bsamal maximilianh GustavoG mayercd Zephyrus daforerog oliviawi zufar bandrewfox lwaldron mdharsee shikin rdiaz jfr ugengma dswan guhjy GeeSharpMinor ptrobajo Jonesy Bioinformatics
	Intra-Platform Repeatability and Inter-Platform Comparability of MicroRNA Microarray Technology [My Copy] PLoS ONE, Vol. 4, No. 5. (14 May 2009), e5540. by Fumiaki Sato, Soken Tsuchiya, Kazuya Terasawa, Gozoh Tsujimoto posted to mirna microarray_technology maqc cross-platform by jfr to the group microRNA on 2009-11-15 14:34:44 as along with 4 people fishtank rdiaz guhjy daforerog
	Transcriptome sequencing of the Microarray Quality Control (MAQC) RNA reference samples using next generation sequencing [My Copy] BMC Genomics, Vol. 10, No. 1. (12 June 2009), 264. by Shrinivasrao Mane, Clive Evans, Kristal Cooper, et al.Oswald Crasta, Otto Folkerts, Stephen Hutchison, Timothy Harkins, Danielle T. Mieg, Jean T. Mieg, Roderick Jensen posted to maqc seq by guhjy on 2009-07-26 09:44:12 as along with 5 people heliopais daforerog GeeSharpMinor natstreet fenghezi
	Unsupervised assessment of microarray data quality using a Gaussian mixture model [My Copy] BMC Bioinformatics, Vol. 10, No. 1. (2009), 191. by Brian Howard, Beate Sick, Steffen Heber posted to maqc microarray by lwaldron on 2009-06-24 22:43:07 as along with 4 people jfr shikin rdiaz renatomilani
	MAQC papers over the cracks [My Copy] Nature Biotechnology, Vol. 25, No. 1., pp. 27-28. by Peng Liang posted to maqc by lwaldron on 2009-04-14 21:46:35 as along with 1 person giovenko
	Cross-platform comparability of microarray technology: Intra-platform consistency and appropriate data analysis procedures are essential [My Copy] BMC Bioinformatics, Vol. 6, No. Suppl 2. (2005) by Leming Shi, Weida Tong, Hong Fang, et al.Uwe Scherf, Jing Han, Raj Puri, Felix Frueh, Federico Goodsaid, Lei Guo, Zhenqiang Su, Tao Han, James Fuscoe, Alex Z. Xu, Tucker Patterson, Huixiao Hong, Qian Xie, Roger Perkins, James Chen, Daniel Casciano posted to dataanalysis maqc microarray reference by lwaldron on 2009-04-09 16:31:00 as along with 2 people jfr cberry
	Use of diagnostic accuracy as a metric for evaluating laboratory proficiency with microarray assays using mixed-tissue RNA reference samples [My Copy] Pharmacogenomics, Vol. 9, No. 11. (November 2008), pp. 1753-1763. by P. S. Pine, M. Boedigheimer, B. A. Rosenzweig, et al.Y. Turpaz, Y. D. He, G. Delenstarr, B. Ganter, K. Jarnagin, W. D. Jones, L. H. Reid, K. L. Thompson posted to inter-laboratory maqc quality_control by jfr on 2009-03-12 10:51:08 as
	Assessment of repeated microarray experiments using mixed tissue RNA reference samples. [My Copy] BioTechniques, Vol. 45, No. 3. (September 2008), pp. 283-292. by A. Mongan, M. Higgins, S. Pine, C. Afshari, H. Hamadeh posted to ma maqc std by guhjy on 2009-01-27 08:40:23 as along with 1 person jfr
	Comparison of the diagnostic performance of human whole genome microarrays using mixed-tissue RNA reference samples. [My Copy] Toxicology letters (7 September 2008) by Karol L L. Thompson, P Scott S. Pine posted to ma maqc std by guhjy on 2009-01-27 08:37:51 as
	Correlation analysis of external RNA controls reveals its utility for assessment of microarray assay. [My Copy] Analytical biochemistry, Vol. 385, No. 2. (15 February 2009), pp. 203-207. by Xiaohui Fan, Hong Fang, Huixiao Hong, Roger Perkins, Leming Shi, Weida Tong posted to ma maqc by guhjy on 2009-01-27 07:19:10 as along with 1 person jfr
	Intraplatform reproducibility and technical precision of gene expression profiling in 4 laboratories investigating 160 leukemia samples: the DACH study. [My Copy] Clinical chemistry, Vol. 54, No. 10. (October 2008), pp. 1705-1715. by A. Kohlmann, E. Haschke-Becher, B. Wimmer, et al.A. Huber-Wechselberger, S. Meyer-Monard, H. Huxol, U. Siegler, M. Rossier, T. Matthes, M. Rebsamen, A. Chiappe, A. Diemand, S. Rauhut, A. Johnson, W. M. Liu, P. M. Williams, L. Wieczorek, T. Haferlach posted to inter-laboratory maqc by jfr on 2008-10-22 16:45:31 as
	Sources of variation in baseline gene expression levels from toxicogenomics study control animals across multiple laboratories [My Copy] BMC Genomics, Vol. 9 (12 June 2008), 285. by Michael J. Boedigheimer, Russell D. Wolfinger, Michael B. Bass, et al.Pierre R. Bushel, Jeff W. Chou, Matthew Cooper, Christopher J. Corton, Jennifer Fostel, Susan Hester, Janice S. Lee, Fenglong Liu, Jie Liu, Hui-Rong Qian, John Quackenbush, Syril Pettit, Karol L. Thompson posted to maqc quality_control by jfr on 2008-10-07 16:37:24 as
	Reproducibility Probability Score—incorporating measurement variability across laboratories for gene selection [My Copy] Nature Biotechnology, Vol. 24, No. 12., pp. 1476-1477. by Guixian Lin, Xuming He, Hanlee Ji, Leming Shi, Ronald W. Davis, Sheng Zhong posted to maqc reproducible_research by jfr on 2008-07-28 11:37:33 as along with 2 people guhjy cberry
	Impact of microarray data quality on genomic data submissions to the FDA [My Copy] Nature Biotechnology, Vol. 24, No. 9., pp. 1105-1107. by Felix W. Frueh posted to comment maqc microarray_technology quality_control by jfr on 2008-07-23 18:32:18 as along with 3 people and 1 group giovanni cberry giovenko GeschwindLab
	Reproducibility of microarray data: a further analysis of microarray quality control (MAQC) data. [My Copy] BMC bioinformatics, Vol. 8 (25 October 2007), 412. by James J. Chen, Huey-Miin M. Hsueh, Robert R. Delongchamp, Chien-Ju J. Lin, Chen-An A. Tsai posted to maqc ma by guhjy on 2008-07-05 01:35:42 as along with 9 people daforerog surajitray bandrewfox lwaldron jfr shigepong GeeSharpMinor shikin giovenko
	The MicroArray Quality Control (MAQC) project shows inter- and intraplatform reproducibility of gene expression measurements. [My Copy] Nature biotechnology, Vol. 24, No. 9. (September 2006), pp. 1151-1161. by , L. Shi, L. H. Reid, et al.W. D. Jones, R. Shippy, J. A. Warrington, S. C. Baker, P. J. Collins, F. de Longueville, E. S. Kawasaki, K. Y. Lee, Y. Luo, Y. A. Sun, J. C. Willey, R. A. Setterquist, G. M. Fischer, W. Tong, Y. P. Dragan, D. J. Dix, F. W. Frueh, F. M. Goodsaid, D. Herman, R. V. Jensen, C. D. Johnson, E. K. Lobenhofer, R. K. Puri, U. Schrf, J. Thierry-Mieg, C. Wang, M. Wilson, P. K. Wolber, L. Zhang, S. Amur, W. Bao, C. C. Barbacioru, A. B. Lucas, V. Bertholet, C. Boysen, B. Bromley, D. Brown, A. Brunner, R. Canales, X. M. Cao, T. A. Cebula, J. J. Chen, J. Cheng, T. M. Chu, E. Chudin, J. Corson, J. C. Corton, L. J. Croner, C. Davies, T. S. Davison, G. Delenstarr, X. Deng, D. Dorris, A. C. Eklund, X. H. Fan, H. Fang, S. Fulmer-Smentek, J. C. Fuscoe, K. Gallagher, W. Ge, L. Guo, X. Guo, J. Hager, P. K. Haje, J. Han, T. Han, H. C. Harbottle, S. C. Harris, E. Hatchwell, C. A. Hauser, S. Hester, H. Hong, P. Hurban, S. A. Jackson, H. Ji, C. R. Knight, W. P. Kuo, J. E. LeClerc, S. Levy, Q. Z. Li, C. Liu, Y. Liu, M. J. Lombardi, Y. Ma, S. R. Magnuson, B. Maqsodi, T. McDaniel, N. Mei, O. Myklebost, B. Ning, N. Novoradovskaya, M. S. Orr, T. W. Osborn, A. Papallo, T. A. Patterson, R. G. Perkins, E. H. Peters, R. Peterson, K. L. Philips, P. S. Pine, L. Pusztai, F. Qian, H. Ren, M. Rosen, B. A. Rosenzweig, R. R. Samaha, M. Schena, G. P. Schroth, S. Shchegrova, D. D. Smith, F. Staedtler, Z. Su, H. Sun, Z. Szallasi, Z. Tezak, D. Thierry-Mieg, K. L. Thompson, I. Tikhonova, Y. Turpaz, B. Vallanat, C. Van, S. J. Walker, S. J. Wang, Y. Wang, R. Wolfinger, A. Wong, J. Wu, C. Xiao, Q. Xie, J. Xu, W. Yang, L. Zhang, S. Zhong, Y. Zong, W. Slikker posted to maqc microarray by shikin on 2008-05-15 13:28:34 as along with 18 people VGreiff bertelsen lwaldron daforerog rdiaz jo_davies pengchy kentsis jfr jdiggans qmwwallace cberry shigepong caseybrown giovenko slevy03 guhjy vmsr
	Rat toxicogenomic study reveals analytical consistency across microarray platforms [My Copy] Nature Biotechnology, Vol. 24, No. 9. (08 September 2006), pp. 1162-1169. by Lei Guo, Edward K. Lobenhofer, Charles Wang, et al.Richard Shippy, Stephen C. Harris, Lu Zhang, Nan Mei, Tao Chen, Damir Herman, Federico M. Goodsaid, Patrick Hurban, Kenneth L. Phillips, Jun Xu, Xutao Deng, Yongming A. Sun, Weida Tong, Yvonne P. Dragan, Leming Shi posted to maqc by giovenko on 2008-05-06 08:37:01 as along with 4 people rdiaz jfr jdiggans cberry
	Evaluation of external RNA controls for the assessment of microarray performance [My Copy] Nature Biotechnology, Vol. 24, No. 9. (09 August 2006), pp. 1132-1139. by Weida Tong, Anne B. Lucas, Richard Shippy, et al.Xiaohui Fan, Hong Fang, Huixiao Hong, Michael S. Orr, Tzu-Ming Chu, Xu Guo, Patrick J. Collins, Yongming A. Sun, Sue-Jane Wang, Wenjun Bao, Russell D. Wolfinger, Svetlana Shchegrova, Lei Guo, Janet A. Warrington, Leming Shi posted to maqc by giovenko on 2008-05-06 08:35:55 as along with 3 people coela jfr cberry
	Evaluation of DNA microarray results with quantitative gene expression platforms [My Copy] Nature Biotechnology, Vol. 24, No. 9. (08 September 2006), pp. 1115-1122. by Roger D. Canales, Yuling Luo, James C. Willey, et al.Bradley Austermiller, Catalin C. Barbacioru, Cecilie Boysen, Kathryn Hunkapiller, Roderick V. Jensen, Charles R. Knight, Kathleen Y. Lee, Yunqing Ma, Botoul Maqsodi, Adam Papallo, Elizabeth H. Peters, Karen Poulter, Patricia L. Ruppel, Raymond R. Samaha, Leming Shi, Wen Yang, Lu Zhang, Federico M. Goodsaid posted to maqc by giovenko on 2008-05-06 08:35:34 as along with 6 people and 1 group VGreiff guhjy jfr giovanni qmwwallace cberry GeschwindLab
	Data quality in genomics and microarrays [My Copy] Nature Biotechnology, Vol. 24, No. 9., pp. 1112-1113. by Hanlee Ji, Ronald W. Davis posted to maqc by giovenko on 2008-05-06 08:35:13 as along with 1 person cberry
	A framework for the use of genomics data at the EPA [My Copy] Nature Biotechnology, Vol. 24, No. 9., pp. 1108-1111. by David J. Dix, Kathryn Gallagher, William H. Benson, et al.Brenda L. Groskinsky, Thomas J. Mcclintock, Kerry L. Dearfield, William H. Farland posted to maqc by giovenko on 2008-05-06 08:34:54 as along with 1 person cberry
	Empowering microarrays in the regulatory setting [My Copy] Nature Biotechnology, Vol. 24, No. 9., pp. 1103-1103. by Daniel A. Casciano, Janet Woodcock posted to maqc by giovenko on 2008-05-06 08:33:31 as
	Making the most of microarrays [My Copy] Nat Biotech, Vol. 24, No. 9. (2006), pp. 1039-1039. posted to maqc by giovenko on 2008-05-06 08:32:59 as along with 2 people rdiaz cberry
	Reproducible and reliable microarray results through quality control: good laboratory proficiency and appropriate data analysis practices are essential☆ [My Copy] Current Opinion in Biotechnology, Vol. 19, No. 1. (February 2008), pp. 10-18. by L. Shi, R. Perkins, H. Fang, W. Tong posted to ma maqc qc stats by guhjy on 2008-04-26 06:14:58 as along with 3 people rdiaz mayercd jfr
	QA/QC issues to aid regulatory acceptance of microarray gene expression data. [My Copy] Environ Mol Mutagen, Vol. 48, No. 5. (June 2007), pp. 349-353. by J. C. Fuscoe, W. Tong, L. Shi posted to maqc quality_control by jfr on 2007-11-23 15:29:01 as

Note: You may cite this page as: http://www.citeulike.org/tag/maqc

Sort by:
Order:	Default Ascending Descending
Empty fields:	Default First Last

quality_control	8
ma	6
microarray	6
microarray_technology	5
cross-platform	3
illumina	3
quality-control	3
applying	2
approach	2
bead	2
challenges	2
chip	2
comparison	2
dataanalysis	2
development	2
generation	2
inter-laboratory	2
microarray-data	2
microarray-data-analysis	2
microarrays	2
mirna	2
newest	2
reference	2
stats	2
std	2
unexpected	2
unravels	2
breast-cancer	1
comment	1
differential	1
differentially-expressed-genes	1
expression	1
fold-change	1
grade	1
meta-signature-analysis	1
profile	1
proliferation-signature	1
qc	1
reproducible_research	1
seq	1
t-test	1
validation	1

Tag maqc [27 articles] Export Sort

Related Tags