Tag metagenomics [at least 200 articles] Export

Recent papers classified by the tag metagenomics.

	Metagenomics versus Moore's law [My Copy] Nature Methods, Vol. 6, No. 9. (01 September 2009), pp. 623-623. posted to metagenomics by seb1 on 2009-11-20 20:18:26 as along with 1 person gderwin
	The ecology of RNA [My Copy] The ISME Journal, Vol. 2, No. 1. (25 October 2007), pp. 1-2. by Mike Manefield posted to metagenomics by seb1 on 2009-11-20 17:48:26 as
	Environmental microarray analyses of Antarctic soil microbial communities [My Copy] The ISME Journal, Vol. 3, No. 3. (20 November 2008), pp. 340-351. by Etienne Yergeau, Sung A. Schoondermark-Stolk, Eoin L. Brodie, et al.Sebastien Dejean, Todd Z. DeSantis, Olivier Goncalves, Yvette M. Piceno, Gary L. Andersen, George A. Kowalchuk posted to metagenomics by seb1 on 2009-11-20 17:48:03 as
	Bias in assessments of marine microbial biodiversity in fosmid libraries as evaluated by pyrosequencing [My Copy] The ISME Journal, Vol. 3, No. 7. (02 April 2009), pp. 792-796. by Ben Temperton, Dawn Field, Anna Oliver, et al.Bela Tiwari, Martin Muhling, Ian Joint, Jack A. Gilbert posted to metagenomics by seb1 on 2009-11-20 17:47:12 as along with 3 people manduca Thaverkamp jmeppley
	Pyrosequencing enumerates and contrasts soil microbial diversity [My Copy] The ISME Journal, Vol. 1, No. 4. (05 July 2007), pp. 283-290. by Luiz F. W. Roesch, Roberta R. Fulthorpe, Alberto Riva, et al.George Casella, Alison K. M. Hadwin, Angela D. Kent, Samira H. Daroub, Flavio A. O. Camargo, William G. Farmerie, Eric W. Triplett posted to pyrosequencing metagenomics by seb1 on 2009-11-20 17:44:31 as along with 5 people druvus esyoun saina_taidi vrich darioacha
	What's the \|[lsquo]\|meta\|[rsquo]\| with metagenomics? [My Copy] The ISME Journal, Vol. 1, No. 2. (17 May 2007), pp. 100-102. by Grieg F. Steward, Michael S. Rappe posted to metagenomics by seb1 on 2009-11-20 17:42:52 as along with 1 person wenhan
	Metagenomics, biotechnology with non-culturable microbes [My Copy] Applied Microbiology and Biotechnology, Vol. 75, No. 5. (1 July 2007), pp. 955-962. by Christel Schmeisser, Helen Steele, Wolfgang Streit posted to synthetic_biology review microbial_ecology microbes metagenomics by Vincent_Rouilly on 2009-11-19 18:04:45 as
	Photosystem I gene cassettes are present in marine virus genomes [My Copy] Nature, Vol. 461, No. 7261. (26 August 2009), pp. 258-262. by Itai Sharon, Ariella Alperovitch, Forest Rohwer, et al.Matthew Haynes, Fabian Glaser, Nof Atamna-Ismaeel, Ron Y. Pinter, Frederic Partensky, Eugene V. Koonin, Yuri I. Wolf, Nathan Nelson, Oded Beja posted to viruses virus metagenomics marine_viruses marine_cyanobacteria marine by idoerg on 2009-11-19 00:17:01 as along with 3 people cmzmasek jdoconnell neils
	Prokaryotic Genomes and Diversity in Surface Ocean Waters: Interrogating the Global Ocean Sampling Metagenome [My Copy] Appl. Environ. Microbiol., Vol. 75, No. 7. (1 April 2009), pp. 2221-2229. by Erin J. Biers, Shulei Sun, Erinn C. Howard posted to otu metagenomics gos 16s by skembel to the group iSEEM on 2009-11-18 22:17:14 as along with 2 people Thaverkamp EKotlarska
	The effect of sequencing errors on metagenomic gene prediction. [My Copy] BMC genomics, Vol. 10, No. 1. (12 November 2009), 520. by Katharina J. Hoff posted to sequencing metagenomics gene_prediction by skembel to the group iSEEM on 2009-11-18 21:40:20 as along with 2 people and 1 group jsatkosk ppgardne Journal picks
	A Bioinformatician's Guide to Metagenomics [My Copy] Microbiol. Mol. Biol. Rev., Vol. 72, No. 4. (1 December 2008), pp. 557-578. by Victor Kunin, Alex Copeland, Alla Lapidus, Konstantinos Mavromatis, Philip Hugenholtz posted to metagenomics 27-nov-2009 by CorinYeats to the group Orengo Group Journal Picks on 2009-11-18 16:20:20 as along with 39 people and 7 groups sconlan jasontsai halinat hwright michaelbarton taylor73 esyoun bluto idoerg hpaces skembel inquil EKotlarska anphony stajich sharpton vrich vaulot adgrativol jakechen balicea dbk GustavoLacerda guhjy hessec fhalbrit Zephyrus anazhu dswan sjcockell Borelli druvus azazello kinestetika jmeppley neils Katje allysonlister skato_toyaku Shared Literature Resource of the Microbial Fitness Group - MPI Bremen iSEEM Papers recommended by the Roscoff Plankton Group Microbial-Ecology Translational Bioinformatics Roswell Cancer Crosstalk microbiology_nijmegen
	Analysis and comparison of very large metagenomes with fast clustering and functional annotation [My Copy] BMC Bioinformatics, Vol. 10, No. 1. (2009), 359. by Weizhong Li posted to metagenomics metagenomic_data_analysis annotation-pipeline by idoerg on 2009-11-17 22:47:10 as along with 5 people and 2 groups sillitoe ramonvidal ppgardne kshameer neils Orengo Group Journal Picks Journal picks
	Comparative Analysis of Pyrosequencing and a Phylogenetic Microarray for Exploring Microbial Community Structures in the Human Distal Intestine [My Copy] PLoS ONE, Vol. 4, No. 8. (20 August 2009), e6669. by Marcus J. Claesson, Orla O'Sullivan, Qiong Wang, et al.Janne Nikkilä, Julian R. Marchesi, Hauke Smidt, Willem M. de Vos, R. Paul Ross, Paul W. O'Toole posted to pyrosequencing phylogenetics metagenomics bootstrap by skembel to the group iSEEM on 2009-11-15 18:23:10 as along with 2 people nnnagara neils
	PyCogent: a toolkit for making sense from sequence [My Copy] Genome Biology, Vol. 8, No. 8. (21 August 2007), R171. by Rob Knight, Peter Maxwell, Amanda Birmingham, et al.Jason Carnes, J. Gregory Caporaso, Brett Easton, Michael Eaton, Micah Hamady, Helen Lindsay, Zongzhi Liu, Catherine Lozupone, Daniel McDonald, Michael Robeson, Raymond Sammut, Sandra Smit, Matthew Wakefield, Jeremy Widmann, Shandy Wikman, Stephanie Wilson, Hua Ying, Gavin Huttley posted to software python metagenomics genomics by idoerg on 2009-11-13 14:36:51 as along with 2 people Thaverkamp ryanraaum
	Windshield splatter analysis with the Galaxy metagenomic pipeline [My Copy] Genome Research, Vol. 19, No. 11. (9 November 2009), pp. 2144-2153. by Sergei Kosakovsky Pond, Samir Wadhawan, Francesca Chiaromonte, et al.Guruprasad Ananda, Wen-Yu Chung, James Taylor, Anton Nekrutenko posted to phylogeny metagenomics annotation by seb1 on 2009-11-11 17:34:08 as along with 8 people and 2 groups jmeppley Katje djkt operon neils idonaldson jgill kshameer microbiology_nijmegen iSEEM
	Bacterial Community Variation in Human Body Habitats Across Space and Time [My Copy] Science (5 November 2009), 1177486. by Elizabeth K. Costello, Christian L. Lauber, Micah Hamady, Noah Fierer, Jeffrey I. Gordon, Rob Knight posted to microbiome metagenomics human by djkt on 2009-11-09 17:23:37 as along with 3 people and 1 group kostanik74 skembel sharpton iSEEM
	High Diversity of the Viral Community from an Antarctic Lake [My Copy] Science, Vol. 326, No. 5954. (6 November 2009), pp. 858-861. by Alberto Lopez-Bueno, Javier Tamames, David Velazquez, Andres Moya, Antonio Quesada, Antonio Alcami posted to virus metagenomics ecology community antarctic by neils on 2009-11-08 22:22:37 as along with 1 person hughitt1
	Prediction of effective genome size in metagenomic samples [My Copy] Genome Biology, Vol. 8 (15 January 2007), R10. by Jeroen Raes, Jan O. Korbel, Martin J. Lercher, Christian von Mering, Peer Bork posted to metagenomics genome_size bioinformatics by halinat on 2009-11-05 15:47:12 as along with 3 people and 1 group idoerg yas michC T_lab
	Evaluation of functional gene enrichment in a soil metagenomic clone library. [My Copy] Journal of microbiological methods, Vol. 76, No. 1. (January 2009), pp. 105-107. by Sandrine Demanèche, Maude M. David, Elisabeth Navarro, Pascal Simonet, Timothy M. Vogel posted to oligonucleotide_probes metagenomics by halinat on 2009-11-04 18:44:00 as
	TACOA - Taxonomic classification of environmental genomic fragments using a kernelized nearest neighbor approach [My Copy] BMC Bioinformatics, Vol. 10, No. 1. (2009), 56. by Naryttza Diaz, Lutz Krause, Alexander Goesmann, Karsten Niehaus, Tim Nattkemper posted to metagenomics bioinformatics by halinat on 2009-11-04 18:35:14 as along with 5 people and 1 group esyoun dakelley jonathaneisen bluto jmeppley iSEEM
	The Sequence Analysis and Management System – SAMS-2.0: Data management and sequence analysis adapted to changing requirements from traditional sanger sequencing to ultrafast sequencing technologies [My Copy] Journal of Biotechnology, Vol. 140, No. 1-2. (10 March 2009), pp. 3-12. by Thomas Bekel, Kolja Henckel, Helge Küster, et al.Folker Meyer, Virginie Mittard Runte, Heiko Neuweger, Daniel Paarmann, Oliver Rupp, Martha Zakrzewski, Alfred Pühler posted to pyrosequencing metagenomics bioinformatics by halinat on 2009-11-04 18:33:01 as along with 1 person druvus
	ShotgunFunctionalizeR: an R-package for functional comparison of metagenomes [My Copy] Bioinformatics, Vol. 25, No. 20. (15 October 2009), pp. 2737-2738. by Erik Kristiansson, Philip Hugenholtz, Daniel Dalevi posted to statistics r metagenomics comparative by operon on 2009-11-03 15:14:37 as along with 4 people and 1 group jmeppley dswan skembel djkt iSEEM
	Metagenomic Analysis of Respiratory Tract DNA Viral Communities in Cystic Fibrosis and Non-Cystic Fibrosis Individuals [My Copy] PLoS ONE, Vol. 4, No. 10. (9 October 2009), e7370. by Dana Willner, Mike Furlan, Matthew Haynes, et al.Robert Schmieder, Florent E. Angly, Joas Silva, Sassan Tammadoni, Bahador Nosrat, Douglas Conrad, Forest Rohwer posted to viral metagenomics cystic_fibrosis cf by skembel on 2009-11-02 22:21:02 as
	Increasing the coverage of a metapopulation consensus genome by iterative read mapping and assembly [My Copy] Bioinformatics, Vol. 25, No. 21. (1 November 2009), pp. 2878-2881. by Bas E. Dutilh, Martijn A. Huynen, Marc Strous posted to short-reads sequence-alignment metagenomics assembly by dakelley on 2009-11-02 04:32:58 as along with 7 people and 1 group druvus kinestetika ThomasDOtto jasontsai skembel sharpton jmeppley iSEEM
	Obesity alters gut microbial ecology. [My Copy] Proc Natl Acad Sci U S A, Vol. 102, No. 31. (2 August 2005), pp. 11070-11075. by Ruth E. Ley, Fredrik Bäckhed, Peter Turnbaugh, Catherine A. Lozupone, Robin D. Knight, Jeffrey I. Gordon posted to metagenomics by robertrentzsch on 2009-10-30 14:57:50 as along with 4 people and 2 groups sim82 Zephyrus marimo michC Orengo Group Journal Picks MathBio
	An obesity-associated gut microbiome with increased capacity for energy harvest. [My Copy] Nature, Vol. 444, No. 7122. (21 December 2006), pp. 1027-1031. by Peter J. Turnbaugh, Ruth E. Ley, Michael A. Mahowald, Vincent Magrini, Elaine R. Mardis, Jeffrey I. Gordon posted to metagenomics by robertrentzsch to the group Orengo Group Journal Picks on 2009-10-30 14:56:44 as along with 8 people and 2 groups Thaverkamp Zephyrus ana jmeppley michC srfairclough wenhan GX structural_bioinformatics Bioinformatics
	Statistical Methods for Detecting Differentially Abundant Features in Clinical Metagenomic Samples [My Copy] PLoS Comput Biol, Vol. 5, No. 4. (10 April 2009), e1000352. by James R. White, Niranjan Nagarajan, Mihai Pop posted to metagenomics biodiversity 29-oct-09 by CorinYeats to the group Orengo Group Journal Picks on 2009-10-29 13:02:13 as along with 12 people and 1 group jfr dayjm taylor73 Thaverkamp hpaces sriesenfeld APRegier dswan druvus djkt skembel idoerg iSEEM
	Phylogenetic screening of a bacterial, metagenomic library using homing endonuclease restriction and marker insertion [My Copy] Nucl. Acids Res. (18 September 2009), gkp746. by Pui Y. Yung, Catherine Burke, Matt Lewis, Suhelen Egan, Staffan Kjelleberg, Torsten Thomas posted to prokariotic phylogeny microbiology metagenomics bateria by inquil on 2009-10-26 10:29:55 as along with 1 person neils
	What is microbial community ecology\|[quest]\| [My Copy] The ISME Journal, Vol. 3, No. 11. (06 August 2009), pp. 1223-1230. by Allan Konopka posted to review microbes metagenomics ecology community by djkt to the group iSEEM on 2009-10-22 22:42:13 as along with 2 people pyilmaz skembel
	A simple, fast, and accurate method of phylogenomic inference [My Copy] Genome Biology, Vol. 9, No. 10. (13 October 2008), R151. by Martin Wu, Jonathan Eisen posted to metagenomics classification by dakelley on 2009-10-22 20:51:16 as along with 12 people and 2 groups jeargle AaronDarling zwang cgaugain treangen Katje operon ellakat scryrps djkt aramata druvus microbiology_nijmegen iSEEM
	Unsupervised statistical clustering of environmental shotgun sequences [My Copy] BMC Bioinformatics, Vol. 10, No. 1. (2009), 316. by Andrey Kislyuk, Srijak Bhatnagar, Jonathan Dushoff, Joshua Weitz posted to metagenomics clustering by dakelley on 2009-10-22 20:50:47 as along with 2 people druvus BioInfoCites
	XplorSeq: A software environment for integrated management and phylogenetic analysis of metagenomic sequence data [My Copy] BMC Bioinformatics, Vol. 9, No. 1. (07 October 2008), 420. by Daniel Frank posted to metagenomics bioinformatics by vaulot on 2009-10-21 16:00:37 as along with 5 people and 3 groups jlgreen Thaverkamp treangen ojabado nuin Papers recommended by the Roscoff Plankton Group Microbial-Ecology iSEEM
	Using growing self-organising maps to improve the binning process in environmental whole-genome shotgun sequencing. [My Copy] Journal of biomedicine & biotechnology, Vol. 2008, No. 1. (2008) by Chon-Kit Kenneth K. Chan, Arthur L. Hsu, Sen-Lin L. Tang, Saman K. Halgamuge posted to metagenomics clustering by dakelley on 2009-10-19 21:26:31 as along with 4 people idoerg azazello druvus alexisfjdufresne
	CompostBin: A DNA Composition-Based Algorithm for Binning Environmental Shotgun Reads [My Copy] Research in Computational Molecular Biology (2008), pp. 17-28. by Sourav Chatterji, Ichitaro Yamazaki, Zhaojun Bai, Jonathan Eisen posted to metagenomics clustering by dakelley on 2009-10-19 21:15:32 as
	Hyperbolic SOM-based clustering of DNA fragment features for taxonomic visualization and classification [My Copy] Bioinformatics, Vol. 24, No. 14. (15 July 2008), pp. 1568-1574. by Christian Martin, Naryttza N. Diaz, Jorg Ontrup, Tim W. Nattkemper posted to metagenomics clustering by dakelley on 2009-10-19 18:01:16 as along with 2 people inesdesantiago nklee
	The genomic basis of trophic strategy in marine bacteria [My Copy] Proceedings of the National Academy of Sciences, Vol. 106, No. 37. (15 September 2009), pp. 15527-15533. by Federico M. Lauro, Diane McDougald, Torsten Thomas, et al.Timothy J. Williams, Suhelen Egan, Scott Rice, Matthew Z. DeMaere, Lily Ting, Haluk Ertan, Justin Johnson, Steven Ferriera, Alla Lapidus, Iain Anderson, Nikos Kyrpides, A. Christine Munk, Chris Detter, Cliff S. Han, Mark V. Brown, Frank T. Robb, Staffan Kjelleberg, Ricardo Cavicchioli posted to niche metagenomics genome by kinestetika to the group Shared Literature Resource of the Microbial Fitness Group - MPI Bremen on 2009-10-19 15:50:32 as along with 3 people zarrazlee Katje maren
	Fuzzy Genome Sequence Assembly for Single and Environmental Genomes [My Copy] Fuzzy Systems in Bioinformatics and Computational Biology (2009), pp. 19-44. by Sara Nasser, Adrienne Breland, Frederick Harris, Monica Nicolescu, Gregory Vert posted to metagenomics clustering by dakelley on 2009-10-16 23:05:41 as
	Evidence-Based Clustering of Reads and Taxonomic Analysis of Metagenomic Data [My Copy] Pattern Recognition in Bioinformatics (2009), pp. 102-112. by Gianluigi Folino, Fabio Gori, Mike Jetten, Elena Marchiori posted to metagenomics clustering by dakelley on 2009-10-16 22:57:41 as
	Clustering Metagenome Short Reads Using Weighted Proteins [My Copy] Evolutionary Computation, Machine Learning and Data Mining in Bioinformatics (2009), pp. 152-163. by Gianluigi Folino, Fabio Gori, Mike Jetten, Elena Marchiori posted to metagenomics clustering by dakelley on 2009-10-16 22:55:23 as
	Community-wide analysis of microbial genome sequence signatures [My Copy] Genome Biology, Vol. 10, No. 8. (2009), R85. by Gregory Dick, Anders Andersson, Brett Baker, et al.Sheri Simmons, Brian Thomas, A. Pepper Yelton, Jillian Banfield posted to metagenomics genome_signatures clustering by dakelley on 2009-10-16 22:48:54 as along with 7 people and 2 groups druvus bdessailly skembel djkt jonilaserson neils barriot Orengo Group Journal Picks iSEEM
	Application of tetranucleotide frequencies for the assignment of genomic fragments [My Copy] Environmental Microbiology, Vol. 6, No. 9. (September 2004), pp. 938-947. by Hanno Teeling, Anke Meyerdierks, Margarete Bauer, Rudolf Amann, Frank O. Glöckner posted to metagenomics genome_signatures clustering by dakelley on 2009-10-16 22:27:24 as along with 7 people Thaverkamp azazello druvus michC bluto george_g mcox
	Widespread metabolic potential for nitrite and nitrate assimilation among Prochlorococcus ecotypes [My Copy] Proceedings of the National Academy of Sciences, Vol. 106, No. 26. (30 June 2009), pp. 10787-10792. by Adam C. Martiny, Satish Kathuria, Paul M. Berube posted to nitrogen_cycles metagenomics cyanobacteria by hwright on 2009-10-15 23:32:46 as
	The NIH Human Microbiome Project [My Copy] Genome Research (9 October 2009) by Jane Peterson, Susan Garges, Maria Giovanni, et al.Pamela McInnes, Lu Wang, Jeffery A. Schloss, Vivien Bonazzi, Jean E. McEwen, Kris A. Wetterstrand, Carolyn Deal, Carl C. Baker, Valentina Di Francesco, T. Kevin Howcroft, Robert W. Karp, R. Dwayne Lunsford, Christopher R. Wellington, Tsegahiwot Belachew, Michael Wright, Christina Giblin, Hagit David, Melody Mills, Rachelle Salomon, Christopher Mullins, Beena Akolkar, Lisa Begg, Cindy Davis, Lindsey Grandison, Michael Humble, Jag Khalsa, A. Roger Little, Hannah Peavy, Carol Pontzer, Matthew Portnoy, Michael H. Sayre, Pamela Starke-Reed, Samir Zakhari, Jennifer Read, Bracie Watson, Mark Guyer posted to metagenomics by kshameer on 2009-10-14 08:00:36 as along with 1 person neils
	Moussa virus: a new member of the Rhabdoviridae family isolated from Culex decens mosquitoes in Côte d'Ivoire. [My Copy] Virus research (2 October 2009) by Phenix-Lan L. Quan, Sandra Junglen, Alla Tashmukhamedova, et al.Sean Conlan, Stephen K. Hutchison, Andreas Kurth, Heinz Ellerbrok, Michael Egholm, Thomas Briese, Fabian H. Leendertz, W. Ian Lipkin posted to virus self rhabdovirus mosquitoes metagenomics by sconlan on 2009-10-13 13:51:28 as
	Environmental Genome Shotgun Sequencing of the Sargasso Sea [My Copy] Science, Vol. 304, No. 5667. (2 April 2004), pp. 66-74. by J. Craig Venter, Karin Remington, John F. Heidelberg, et al.Aaron L. Halpern, Doug Rusch, Jonathan A. Eisen, Dongying Wu, Ian Paulsen, Karen E. Nelson, William Nelson, Derrick E. Fouts, Samuel Levy, Anthony H. Knap, Michael W. Lomas, Ken Nealson, Owen White, Jeremy Peterson, Jeff Hoffman, Rachel Parsons, Holly Baden-Tillson, Cynthia Pfannkoch, Yu-Hui Rogers, Hamilton O. Smith posted to shotgun_sequencing metagenomics by skembel on 2009-10-09 20:25:51 as along with 20 people and 2 groups esyoun Thaverkamp jbhiatt kinestetika knaseanka eoghanharr johanviklund bpb jmeppley balajis eweaver AaronDarling bluto jdelcampo azazello beatrizfernandez wenhan pradiptaray mcox vrich microbiology_nijmegen Microbial-Ecology
	The Airborne Metagenome in an Indoor Urban Environment [My Copy] PLoS ONE, Vol. 3, No. 4. (2 April 2008), e1862. by Susannah G. Tringe, Tao Zhang, Xuguo Liu, et al.Yiting Yu, Wah H. Lee, Jennifer Yap, Fei Yao, Sim T. Suan, Seah K. Ing, Matthew Haynes, Forest Rohwer, Chia L. Wei, Patrick Tan, James Bristow, Edward M. Rubin, Yijun Ruan posted to metagenomics air by skembel on 2009-10-09 20:23:26 as along with 3 people and 1 group vmedina09 semrich djkt iSEEM
	Inference of Microbial Recombination Rates from Metagenomic Data [My Copy] PLoS Genet, Vol. 5, No. 10. (2 October 2009), e1000674. by Philip L. F. Johnson, Montgomery Slatkin posted to recombination microbes metagenomics by djkt to the group iSEEM on 2009-10-08 16:16:52 as along with 3 people druvus kinestetika maren
	A Novel Bioinformatics Strategy for Function Prediction of Poorly-Characterized Protein Genes Obtained from Metagenome Analyses. [My Copy] DNA research : an international journal for rapid publication of reports on genes and genomes (3 October 2009) by Takashi Abe, Shigehiko Kanaya, Hiroshi Uehara, Toshimichi Ikemura posted to protein-classification protein-analysis metagenomics by sjcockell on 2009-10-07 11:57:17 as
	Metagenomic analysis of RNA viruses in a fresh water lake. [My Copy] PloS one, Vol. 4, No. 9. (29 September 2009), e7264. by Appolinaire Djikeng, Ryan Kuzmickas, Norman G. Anderson, David J. Spiro posted to virus metagenomics by kinestetika on 2009-10-07 09:05:16 as along with 1 person neils
	Visual and statistical comparison of metagenomes [My Copy] Bioinformatics, Vol. 25, No. 15. (1 August 2009), pp. 1849-1855. by Suparna Mitra, Bernhard Klar, Daniel H. Huson posted to visualization metagenomics by carlk on 2009-10-05 18:04:40 as along with 13 people and 3 groups polivares inesdesantiago taylor73 ollieredfernwork nuin stajich sriesenfeld idoerg guhjy chrisamiller jmeppley neils druvus Orengo Group Journal Picks Mycology iSEEM

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bioinformatics	123
ecology	74
review	73
methods	65
sequencing	65
microbes	64
genomics	63
diversity	61
bacteria	60
marine	46
454	43
software	41
evolution	39
genome	38
phylogenetics	36
virus	35
annotation	34
microbiology	34
rna	28
community	27
microbial	27
microbiome	26
soil	24
clustering	22
binning	20
human	20
phylogeny	20
pyrosequencing	20
16s	19
case	18
sea	18
microbial-ecology	17
statistics	17
2008	16
bioinformatics_software	16
biodiversity	15
microbial_ecology	15
water	15
assembly	14
marine_microbiology	14
rrna	14
classification	13
environment	13
metabolism	13
ht_sequencing	12
subassemblypaper	12
gut	11
screening	11
simulation	11
taxonomy	11
2007	10
db	10
gos	10
symbiosis	10
algorithm	9
biochemistry	9
ecological_genomics	9
environmental	9
proteomics	9
wga	9
analysis	8
archaea	8
database	8
gene	8
mda	8
medical	8
microarray	8
microbial_communities	8
popgen	8
population	8
sequence	8
alignment	7
comparative_genomics	7
comparative_metagenomics	7
eukaryotes	7
fivestar	7
global_ocean_survey	7
method	7
ocean	7
otu	7
phage	7
prochlorococcus	7
proteins	7
viruses	7
communities	6
crenarchaeal_nitrification	6
cyanobacteria	6
data	6
environmental_genomics	6
evolutionary_genomics	6
freshwater_ecology	6
metagenome	6
prokaryotes	6
transcriptomics	6
virology	6
visualization	6
biotechnology	5
expression	5
methane	5
next_generation	5

Tag metagenomics [at least 200 articles] Export

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