Tag microbes [158 articles] Export

Recent papers classified by the tag microbes.

	De novo computational prediction of non-coding RNA genes in prokaryotic genomes [My Copy] Bioinformatics, Vol. 25, No. 22. (15 November 2009), pp. 2897-2905. by Thao T. Tran, Fengfeng Zhou, Sarah Marshburn, Mark Stead, Sidney R. Kushner, Ying Xu posted to rna microbes annotation by djkt to the group iSEEM on 2009-11-04 17:41:30 as along with 4 people and 1 group TRHvidsten jmcq ppgardne druvus Journal picks
	THE ECOLOGY AND GENETICS OF MICROBIAL DIVERSITY [My Copy] Annual Review of Microbiology, Vol. 58, No. 1. (2004), pp. 207-231. by Rees Kassen, Paul B. Rainey posted to microbes evolution by aaltenburger on 2009-11-03 11:18:31 as along with 2 people tomhebbron rabu
	What is microbial community ecology\|[quest]\| [My Copy] The ISME Journal, Vol. 3, No. 11. (06 August 2009), pp. 1223-1230. by Allan Konopka posted to review microbes metagenomics ecology community by djkt to the group iSEEM on 2009-10-22 22:42:13 as along with 1 person skembel
	Adaptive Immunity: Care for the community [My Copy] Nature, Vol. 445, No. 7124. (10 January 2007), pp. 153-153. by Margaret McFall-Ngai posted to vertebrates theory microbes immune_bouncer immune adaptive_immune_system by tomhebbron on 2009-10-19 14:17:34 as along with 2 people VGreiff dayjm
	Deep-Sea Archaea Fix and Share Nitrogen in Methane-Consuming Microbial Consortia [My Copy] Science, Vol. 326, No. 5951. (16 October 2009), pp. 422-426. by Anne E. Dekas, Rachel S. Poretsky, Victoria J. Orphan posted to microbes environment community by djkt to the group iSEEM on 2009-10-16 06:27:37 as
	Local Adaptation of Bacteriophages to Their Bacterial Hosts in Soil [My Copy] Science, Vol. 325, No. 5942. (14 August 2009), 833. by Michiel Vos, Philip J. Birkett, Elizabeth Birch, Robert I. Griffiths, Angus Buckling posted to soil phage microbes local-adaptation by maren on 2009-10-14 02:32:32 as along with 3 people and 1 group timothee-poisot michaelbarton djkt iSEEM
	Inference of Microbial Recombination Rates from Metagenomic Data [My Copy] PLoS Genet, Vol. 5, No. 10. (2 October 2009), e1000674. by Philip L. F. Johnson, Montgomery Slatkin posted to recombination microbes metagenomics by djkt to the group iSEEM on 2009-10-08 16:16:52 as along with 3 people druvus kinestetika maren
	Access to mutualistic endosymbiotic microbes: an underappreciated benefit of group living [My Copy] Behavioral Ecology and Sociobiology, Vol. 62, No. 4. (1 February 2008), pp. 479-497. by Michael Lombardo posted to symbiosis microbes behavioral_ecology by maren on 2009-10-01 02:11:28 as along with 1 person jbsaltz
	Intertwined Evolutionary Histories of Marine Synechococcus and Prochlorococcus marinus [My Copy] Genome Biol Evol, Vol. 2009, No. 0. (23 September 2009), pp. 325-339. by Olga Zhaxybayeva, W. Ford Doolittle, R. Thane Papke, J. Peter Gogarten posted to phylogenetics microbes ecology by djkt to the group iSEEM on 2009-10-01 00:13:13 as along with 1 person skembel
	Human gut microbiome adopts an alternative state following small bowel transplantation [My Copy] Proceedings of the National Academy of Sciences (17 September 2009) by Amber L. Hartman, Denver M. Lough, Dinesh K. Barupal, et al.Oliver Fiehn, Thomas Fishbein, Michael Zasloff, Jonathan A. Eisen posted to microbiome microbes community by djkt to the group iSEEM on 2009-09-22 23:32:15 as along with 2 people jgill skembel
	Microbial Biogeography: From Taxonomy to Traits [My Copy] Science, Vol. 320, No. 5879. (23 May 2008), pp. 1039-1043. by Jessica L. Green, Brendan J. Bohannan, Rachel J. Whitaker posted to traits microbes biogeography by skembel on 2009-09-18 23:17:04 as along with 9 people and 6 groups hwright anphony druvus stajich vaulot dbikard djkt jdelcampo dbensasson Savage Lab, UCLA Mycology Papers recommended by the Roscoff Plankton Group Centre de Recherches Interdisciplinaires Microbial-Ecology iSEEM
	A Constant Flux of Diverse Thermophilic Bacteria into the Cold Arctic Seabed [My Copy] Science, Vol. 325, No. 5947. (18 September 2009), pp. 1541-1544. by Casey Hubert, Alexander Loy, Maren Nickel, et al.Carol Arnosti, Christian Baranyi, Volker Bruchert, Timothy Ferdelman, Kai Finster, Flemming M. Christensen, Julia Rosa de Rezende, Verona Vandieken, Bo B. Jorgensen posted to microbes ecology dispersal bacteria by skembel on 2009-09-18 01:03:46 as
	Controls on Diatom Biogeography in the Ocean [My Copy] Science, Vol. 325, No. 5947. (18 September 2009), pp. 1539-1541. by Pedro Cermeno, Paul G. Falkowski posted to ocean microbes diatoms biogeography by skembel on 2009-09-18 01:02:04 as along with 1 person dinnes
	Comparative systems biology across an evolutionary gradient within the Shewanella genus [My Copy] Proceedings of the National Academy of Sciences, Vol. 106, No. 37. (15 September 2009), pp. 15909-15914. by Konstantinos T. Konstantinidis, Margrethe H. Serres, Margaret F. Romine, et al.Jorge L. M. Rodrigues, Jennifer Auchtung, Lee-Ann McCue, Mary S. Lipton, Anna Obraztsova, Carol S. Giometti, Kenneth H. Nealson, James K. Fredrickson, James M. Tiedje posted to systems_biology shewanella microbes by skembel on 2009-09-16 22:39:41 as along with 2 people kinestetika maren
	Environmental Shotgun Sequencing: Its Potential and Challenges for Studying the Hidden World of Microbes [My Copy] PLoS Biol, Vol. 5, No. 3. (13 March 2007), e82. by Jonathan A. Eisen posted to shotgun_sequencing microbial microbes bioinformatics biodiversity by hwright on 2009-09-12 13:04:28 as along with 16 people and 3 groups druvus skembel Thaverkamp AaronDarling anphony precale adgrativol silberbauer jmeppley jdelcampo azazello beatrizfernandez xingxu jlgreen olympos djkt Microbial-Ecology Green Lab iSEEM
	Functional Characterization of the Antibiotic Resistance Reservoir in the Human Microflora [My Copy] Science, Vol. 325, No. 5944. (28 August 2009), pp. 1128-1131. by Morten O. A. Sommer, Gautam Dantas, George M. Church posted to pathogen microbiome microbes metagenomics evolution disease by djkt to the group iSEEM on 2009-09-03 18:03:10 as along with 4 people jgill pkm chriswillmott rpatward
	Community-wide analysis of microbial genome sequence signatures [My Copy] Genome Biology, Vol. 10, No. 8. (2009), R85. by Gregory Dick, Anders Andersson, Brett Baker, et al.Sheri Simmons, Brian Thomas, A. Pepper Yelton, Jillian Banfield posted to otu microbes metagenomics community by djkt to the group iSEEM on 2009-09-02 23:52:48 as along with 7 people and 1 group dakelley druvus bdessailly skembel jonilaserson neils barriot Orengo Group Journal Picks
	Coevolution between cooperators and cheats in a microbial system. [My Copy] Evolution; international journal of organic evolution, Vol. 63, No. 9. (September 2009), pp. 2248-2256. by Quan-Guo G. Zhang, Angus Buckling, Richard J. Ellis, H. Charles Godfray posted to microbes coevolution by maren on 2009-08-27 19:38:10 as along with 1 person niallhaslam
	Transport of lipopolysaccharide across the cell envelope: the long road of discovery [My Copy] Nat Rev Micro, Vol. 7, No. 9. (27 September 2009), pp. 677-683. by Natividad Ruiz, Daniel Kahne, Thomas J. Silhavy posted to microbes lps by maren on 2009-08-17 16:58:05 as
	Soil acidity, ecological stoichiometry and allometric scaling in grassland food webs [My Copy] Global Change Biology, Vol. 9999, No. 9999. (2009) by R. Christian Mulde, James J. Elser posted to microbes interactions food-web community body-size biomass biodiversity by mhasoba to the group Savage Lab, UCLA on 2009-08-15 01:17:18 as along with 1 person and 1 group kinestetika Shared Literature Resource of the Microbial Fitness Group - MPI Bremen
	Programming cells by multiplex genome engineering and accelerated evolution [My Copy] Nature, Vol. 460, No. 7257. (26 July 2009), pp. 894-898. by Harris H. Wang, Farren J. Isaacs, Peter A. Carr, et al.Zachary Z. Sun, George Xu, Craig R. Forest, George M. Church posted to mutation microbes evolution acceleration by djkt on 2009-08-12 19:06:07 as along with 13 people and 2 groups abhishek_tiwari TorstenWaldminghaus jdoconnell dswan Annab badi druvus dayjm pkonings zwang phoenixzxl biomcgary dbikard Journal picks Synthetic Biology
	Soil Microbial Communities and Restoration Ecology: Facilitators or Followers? [My Copy] Science, Vol. 325, No. 5940. (31 July 2009), pp. 573-574. by Jim Harris posted to climate evolution food-web microbes network by mhasoba to the group Savage Lab, UCLA on 2009-08-04 19:12:17 as
	Topographical and Temporal Diversity of the Human Skin Microbiome [My Copy] Science, Vol. 324, No. 5931. (29 May 2009), pp. 1190-1192. by Elizabeth A. Grice, Heidi H. Kong, Sean Conlan, et al.Clayton B. Deming, Joie Davis, Alice C. Young, Nisc Comparative Sequencing Program, Gerard G. Bouffard, Robert W. Blakesley, Patrick R. Murray, Eric D. Green, Maria L. Turner, Julia A. Segre posted to dermatology microbes by absterga on 2009-07-26 20:21:52 as along with 7 people and 1 group roys mishibas skembel ematsen t08681mn sconlan djkt iSEEM
	Origin of an Alternative Genetic Code in the Extremely Small and GC–Rich Genome of a Bacterial Symbiont [My Copy] PLoS Genet, Vol. 5, No. 7. (17 July 2009), e1000565. by John P. Mccutcheon, Bradon R. Mcdonald, Nancy A. Moran posted to bias codon gccontent genome_size microbes by djkt to the group iSEEM on 2009-07-17 16:50:16 as
	THE RATE AND PATTERN OF CLADOGENESIS IN MICROBES [My Copy] Evolution, Vol. 58, No. 5. (2004), pp. 946-955. by Andrew P. Martin, Elizabeth K. Costello, Allen F. Meyer, Diana R. Nemergut, Steve K. Schmidt posted to diversification microbes phylogeny by skembel on 2009-07-16 22:46:06 as
	The Role of Anorexia in Resistance and Tolerance to Infections in <italic>Drosophila</italic> [My Copy] PLoS Biol, Vol. 7, No. 7. (14 July 2009), e1000150. by Janelle S. Ayres, David S. Schneider posted to aging diet disease microbes by djkt on 2009-07-14 21:01:39 as
	Adaptive prediction of environmental changes by microorganisms [My Copy] Nature, Vol. 460, No. 7252. (17 June 2009), pp. 220-224. by Amir Mitchell, Gal H. Romano, Bella Groisman, et al.Avihu Yona, Erez Dekel, Martin Kupiec, Orna Dahan, Yitzhak Pilpel posted to environment evolution microbes selection by djkt to the group iSEEM on 2009-07-08 19:46:07 as along with 8 people yyfwuhan kinestetika biomcgary sriesenfeld timotay izuleta jjray michaelbarton
	Antibiotics in Nature: Beyond Biological Warfare [My Copy] Science, Vol. 324, No. 5935. (26 June 2009), pp. 1637-1639. by Christine Mlot posted to antibiotics biofilm communication messenger metabolites microbes novelty prokaryotes secondary by sharpton on 2009-07-01 18:28:44 as along with 2 people cambray paulschlesinger
	<italic>Caenorhabditis elegans</italic> Genomic Response to Soil Bacteria Predicts Environment-Specific Genetic Effects on Life History Traits [My Copy] PLoS Genet, Vol. 5, No. 6. (5 June 2009), e1000503. by Joseph D. Coolon, Kenneth L. Jones, Timothy C. Todd, Bryanua C. Carr, Michael A. Herman posted to environment expression microbes worm by djkt to the group iSEEM on 2009-06-08 17:34:35 as along with 1 person trfield
	Simultaneous analysis of microbial identity and function using NanoSIMS [My Copy] Environmental Microbiology, Vol. 0, No. 0. (0), pp. ???-???. by Tianlun Li, Ting Di Wu, Laurent Mazeas, et al.Laurent Toffin, Jean, Gerard Leblon, Theodore Bouchez posted to fish microbes nanosims sims simsish by jessec on 2009-05-19 16:14:54 as along with 2 people and 1 group Katje Olaf_Ilzins microbiology_nijmegen
	Automatic identification of species-specific repetitive DNA sequences and their utilization for detecting microbial organisms [My Copy] Bioinformatics (8 April 2009), btp241. by Triinu Koressaar, Kai Joers, Maido Remm posted to microbes repeats by djkt to the group iSEEM on 2009-05-14 18:19:58 as along with 2 people nuin druvus
	Microbial community structure and its functional implications [My Copy] Nature, Vol. 459, No. 7244. (14 May 2009), pp. 193-199. by Jed A. Fuhrman posted to community microbes review by djkt to the group iSEEM on 2009-05-13 23:03:45 as along with 4 people hwright jmeppley Thaverkamp skembel
	The microbial ocean from genomes to biomes [My Copy] Nature, Vol. 459, No. 7244. (14 May 2009), pp. 200-206. by Edward F. Delong posted to ecology metagenomics microbes review by djkt to the group iSEEM on 2009-05-13 23:02:23 as along with 6 people and 1 group roys jmeppley stajich Thaverkamp neils skembel Mycology
	Viruses manipulate the marine environment [My Copy] Nature, Vol. 459, No. 7244. (13 May 2009), pp. 207-212. by Forest Rohwer, Rebecca V. Thurber posted to microbes review virus by djkt to the group iSEEM on 2009-05-13 23:01:15 as along with 3 people tomhebbron skembel Thaverkamp
	Metatranscriptomics reveals unique microbial small RNAs in the ocean/'s water column [My Copy] Nature, Vol. 459, No. 7244. (14 May 2009), pp. 266-269. by Yanmei Shi, Gene W. Tyson, Edward F. Delong posted to expression metagenomics microbes rna by djkt to the group iSEEM on 2009-05-13 23:00:14 as along with 12 people and 3 groups kinestetika gdb michaelbarton samgj vaulot Katje absterga jmeppley Thaverkamp pengchy skembel jbhiatt Papers recommended by the Roscoff Plankton Group Microbial-Ecology microbiology_nijmegen
	Microbial oceanography in a sea of opportunity [My Copy] Nature, Vol. 459, No. 7244. (14 May 2009), pp. 180-184. by Chris Bowler, David M. Karl, Rita R. Colwell posted to microbes ocean by skembel on 2009-05-13 20:56:49 as along with 3 people and 1 group hwright jmeppley Thaverkamp Microbial-Ecology
	The apolipoprotein L family of programmed cell death and immunity genes rapidly evolved in primates at discrete sites of host–pathogen interactions [My Copy] Genome Research, Vol. 19, No. 5. (May 2009), pp. 850-858. by Eric E. Smith, Harmit S. Malik posted to immunity microbes pathogen primates selection by djkt on 2009-05-02 02:48:34 as
	The convergence of carbohydrate active gene repertoires in human gut microbes [My Copy] Proceedings of the National Academy of Sciences, Vol. 105, No. 39. (30 September 2008), pp. 15076-15081. by Catherine A. Lozupone, Micah Hamady, Brandi L. Cantarel, et al.Pedro M. Coutinho, Bernard Henrissat, Jeffrey I. Gordon, Rob Knight posted to human metabolic metagenomics microbes microbiome otu by djkt to the group iSEEM on 2009-04-22 19:27:33 as along with 5 people cmzmasek sharpton Thaverkamp skembel sg45653
	Statistical Methods for Detecting Differentially Abundant Features in Clinical Metagenomic Samples [My Copy] PLoS Comput Biol, Vol. 5, No. 4. (10 April 2009), e1000352. by James R. White, Niranjan Nagarajan, Mihai Pop posted to metagenomics microbes microbiome testing by djkt on 2009-04-13 18:00:16 as along with 12 people and 2 groups jfr CorinYeats dayjm taylor73 Thaverkamp hpaces sriesenfeld APRegier dswan druvus skembel idoerg Orengo Group Journal Picks iSEEM
	Genome-Wide Functional Divergence after the Symbiosis of Proteobacteria with Insects Unraveled through a Novel Computational Approach [My Copy] PLoS Comput Biol, Vol. 5, No. 4. (3 April 2009), e1000344. by Christina Toft, Tom A. Williams, Mario A. Fares posted to evolution microbes microbiome symbiosis by djkt to the group iSEEM on 2009-04-03 16:44:52 as along with 2 people mpvazquez bourby
	Global diversity in the human salivary microbiome [My Copy] Genome Research (April 2009) by Ivan Nasidze, Jing Li, Dominique Quinque, Kun Tang, Mark Stoneking posted to microbes microbiome migration popgen by djkt to the group iSEEM on 2009-04-01 20:02:39 as along with 2 people skembel jbhiatt
	A single regulatory gene is sufficient to alter bacterial host range [My Copy] Nature, Vol. 458, No. 7235. (12 March 2009), pp. 215-218. by Mark J. Mandel, Michael S. Wollenberg, Eric V. Stabb, Karen L. Visick, Edward G. Ruby posted to microbes microbiome symbiosis by djkt to the group iSEEM on 2009-03-21 02:13:44 as along with 5 people kinestetika biomcgary neils sconlan flybell
	Transcription factor function and promoter architecture govern the evolution of bacterial regulons [My Copy] Proceedings of the National Academy of Sciences (27 February 2009) by Christian J. Perez, Eduardo A. Groisman posted to evolution expression microbes tf by djkt on 2009-03-21 01:37:02 as along with 5 people Sjitprasutwit trfield mstumpf provero jjray
	Rapid Pathway Evolution Facilitated by Horizontal Gene Transfers across Prokaryotic Lineages [My Copy] PLoS Genet, Vol. 5, No. 3. (6 March 2009), e1000402. by Wataru Iwasaki, Toshihisa Takagi posted to evolution gene-transfer microbes sysbio by djkt to the group iSEEM on 2009-03-06 19:37:03 as along with 2 people fishinwind trfield
	Estimating the size of the bacterial pan-genome. [My Copy] Trends in genetics : TIG, Vol. 25, No. 3. (23 March 2009), pp. 107-110. by Pascal Lapierre, J. Peter Gogarten posted to evolution genome microbes proteins by djkt to the group iSEEM on 2009-03-05 16:26:54 as along with 4 people treangen azazello skembel nyyu
	Type II fatty acid synthesis is not a suitable antibiotic target for Gram-positive pathogens [My Copy] Nature, Vol. 458, No. 7234. (5 March 2009), pp. 83-86. by Sophie Brinster, Gilles Lamberet, Bart Staels, Patrick Trieu-Cuot, Alexandra Gruss, Claire Poyart posted to clinical microbes by absterga on 2009-03-05 05:10:17 as
	Comparative day/night metatranscriptomic analysis of microbial communities in the North Pacific subtropical gyre [My Copy] Environmental Microbiology, Vol. 11, No. 6. (2009), pp. 1358-1375. by Rachel S. Poretsky, Ian Hewson, Shulei Sun, Andrew E. Allen, Jonathan P. Zehr, Mary A. Moran posted to ecology expression metagenomics microbes by djkt to the group iSEEM on 2009-03-03 00:04:27 as along with 3 people kinestetika jmeppley skembel
	Microbiology of the Phyllosphere [My Copy] Appl. Environ. Microbiol., Vol. 69, No. 4. (1 April 2003), pp. 1875-1883. by Steven E. Lindow, Maria T. Brandl posted to microbes pmt by maren on 2009-02-18 06:09:09 as
	Systems Biology: Functional analysis of natural microbial consortia using community proteomics [My Copy] Nat Rev Micro, Vol. 7, No. 3. (March 2009), pp. 196-205. by Nathan C. Verberkmoes, Vincent J. Denef, Robert L. Hettich, Jillian F. Banfield posted to bacteria biofilm community ecology microbes proteomics systems-biology by behindtherabbit on 2009-02-17 19:42:55 as along with 2 people and 1 group kinestetika Katje microbiology_nijmegen
	Polydnaviruses of Braconid Wasps Derive from an Ancestral Nudivirus [My Copy] Science, Vol. 323, No. 5916. (13 February 2009), pp. 926-930. by Annie Bezier, Marc Annaheim, Juline Herbiniere, et al.Christoph Wetterwald, Gabor Gyapay, Sylvie Bernard-Samain, Patrick Wincker, Isabel Roditi, Manfred Heller, Maya Belghazi, Rita Pfister-Wilhem, Georges Periquet, Catherine Dupuy, Elisabeth Huguet, Anne-Nathalie Volkoff, Beatrice Lanzrein, Jean-Michel Drezen posted to microbes rna virus by djkt on 2009-02-13 16:35:25 as along with 3 people and 1 group tomhebbron wsjames ulfmartinblom Oxford Virology

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metagenomics	63
evolution	40
ecology	34
microbiome	25
review	19
human	15
community	13
diversity	13
popgen	13
rev	13
phylogenetics	11
pmt	11
selection	10
symbiosis	9
expression	8
biogeography	7
environment	7
proteins	7
rna	7
virus	7
geobacter	5
chromosome	4
energy	4
food-web	4
migration	4
nanowire	4
pathogen	4
soil	4
acetate	3
arees2009	3
bacteria	3
biodiversity	3
biofilm	3
biosphere	3
disease	3
gene-transfer	3
gut	3
immunity	3
microbial	3
microorganism	3
mutation	3
network	3
pili	3
recombination	3
sequencing	3
trait	3
annotation	2
bias	2
biofuel	2
biology	2
biomass	2
biotechnology	2
body-size	2
chemical	2
china	2
climate	2
coal	2
codon	2
deep	2
degradation	2
design	2
diagenesis	2
duplication	2
ecosystems	2
engineering	2
epiphyte	2
food	2
fungi	2
gccontent	2
genographic	2
genome	2
genome_size	2
indel	2
interactions	2
jclub	2
microarray	2
nanoparticles	2
ocean	2
otu	2
phage	2
preservation	2
rhizobia	2
salmon	2
synthetic	2
sysbio	2
variation	2
worm	2
adhesin	1
coevolution	1
deep-biosphere	1
diversification	1
enzymes	1
feedstock	1
freeze-thaw	1
inorganic	1
new	1
obesity	1
peptidoglycan	1
simulation	1
theory	1

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