Tag modularity [at least 200 articles] Export

Recent papers classified by the tag modularity.

	Interim Bayesian Nash equilibrium on universal type spaces for supermodular games☆ [My Copy] Journal of Economic Theory (16 July 2009) by Timothy Van Zandt posted to modularity game_theory by YoshiY on 2009-11-07 13:49:32 as
	Community Structure of the Physical Review Citation Network [My Copy] (3 Nov 2009) by P. Chen, S. Redner posted to module modularity community citation by marinari on 2009-11-05 12:10:06 as along with 2 people ethome RMT
	Advanced modularity-specialized label propagation algorithm for detecting communities in networks [My Copy] (12 Oct 2009) by Xin Liu, Tsuyoshi Murata posted to network modularity lpam label_propagation complex_networks community_structures clustering by mjb on 2009-11-02 09:25:09 as
	Hierarchical Organization of Modularity in Metabolic Networks [My Copy] Science, Vol. 297, No. 5586. (30 August 2002), pp. 1551-1555. by E. Ravasz, A. L. Somera, D. A. Mongru, Z. N. Oltvai, A. L. Barabasi posted to modularity hierachy complex_network by ganden on 2009-10-28 15:30:10 as along with 23 people and 9 groups feshbach cn_honjyo haewoon Scis0000002 schwartzjmc zufar deanmalmgren diamantis shivaram alexg yish wnpx ddahlem neveaire bigbossman griota jeremymiller natstreet karfunkel Evangelia stefanoallesina ellakat iris_2001 Biostatistics Computational-Genomics Bioinformatics mathgamespatterns Neuroscience dtl vds-arg eni GeschwindLab
	Biological robustness [My Copy] Nature Reviews Genetics, Vol. 5, No. 11. (01 November 2004), pp. 826-837. by Hiroaki Kitano posted to systems_biology robust redundancy modularity fragility evolution by jporternj on 2009-10-27 00:00:04 as along with 3 people and 1 group livingthingdan massivemayhem bootsy livingthing
	Finding community structure in networks using the eigenvectors of matrices [My Copy] Physical Review E (Statistical, Nonlinear, and Soft Matter Physics), Vol. 74, No. 3. (2006), 036104. by M. E. J. Newman posted to topology network motif modularity algorithm by tomhebbron on 2009-10-21 11:28:20 as along with 9 people and 1 group AaronMcDaid lawraga studentx vtraag muraken cgaugain bigbossman hannu Diego_Prada ThinkTank
	Resolution limit in community detection [My Copy] Proceedings of the National Academy of Sciences, Vol. 104, No. 1. (2 January 2007), pp. 36-41. by Santo Fortunato, Marc BarthÃ©lemy posted to modularity community by AaronMcDaid on 2009-10-19 00:43:09 as along with 16 people and 3 groups wjant pdlug compbio almadana conradlee zufar vtraag cgaugain pdelosri lfriedl yas muraken iris_2001 kubyaddi marcio orahcio kdl T_lab EPFL_SB_ITP_LBS
	Phylogenetic analysis of modularity in protein interaction networks. [My Copy] BMC bioinformatics, Vol. 10, No. 1. (14 October 2009), 333. by Sinan Erten, Xin Li, Gurkan Bebek, Jing Li, Mehmet Koyutürk posted to proteininteraction phylogeny network modularity graph evolution comparison by barriot on 2009-10-15 06:39:34 as along with 7 people and 2 groups sillitoe biomcgary ppgardne grahamc zwang druvus phoenixzxl Orengo Group Journal Picks Journal picks
	Organization of the autoantibody repertoire in healthy newborns and adults revealed by system level informatics of antigen microarray data. [My Copy] Proceedings of the National Academy of Sciences of the United States of America, Vol. 106, No. 34. (25 August 2009), pp. 14484-14489. by Asaf Madi, Inbal Hecht, Sharron Bransburg-Zabary, et al.Yifat Merbl, Adi Pick, Merav Zucker-Toledano, Francisco J. Quintana, Alfred I. Tauber, Irun R. Cohen, Eshel Ben-Jacob posted to modularity microarray immunology clustering by marcio on 2009-10-15 03:24:38 as along with 3 people VGreiff pineapple tomhebbron
	The Modular Organization of Protein Interactions in Escherichia coli [My Copy] PLoS Comput Biol, Vol. 5, No. 10. (2 October 2009), e1000523. by José M. Peregrín-Alvarez, Xuejian Xiong, Chong Su, John Parkinson posted to protein_complex protein-protein_interaction network_evolution module modularity e_coli by biomcgary on 2009-10-13 22:47:39 as along with 6 people and 2 groups venancio CorinYeats grahamc kiekyon poirel dswan Orengo Group Journal Picks Bioinformatics
	Monotone Comparative Statics [My Copy] Econometrica, Vol. 62, No. 1. (1994), pp. 157-180. by Paul Milgrom, Chris Shannon posted to optimization modularity mathematics by YoshiY on 2009-10-12 13:28:39 as along with 2 people toomash tkravitz
	A novel scoring approach for protein co-purification data reveals high interaction specificity. [My Copy] PLoS computational biology, Vol. 5, No. 9. (September 2009) by Xueping Yu, Joseph Ivanic, Anders Wallqvist, Jaques Reifman posted to protein_protein_interactions network_confidence modularity methods mass_spec by grahamc on 2009-10-11 15:50:35 as along with 2 people snow_dragon carlk
	Analysis of the structure of complex networks at different resolution levels [My Copy] (15 Jan 2008) by Alex Arenas, Alberto Fernandez, Sergio Gomez posted to networks modules moduledetection modularity clustering by carlk on 2009-10-09 22:16:05 as along with 4 people snow_dragon kubyaddi sato-ryu bruno
	The conservation and evolutionary modularity of metabolism [My Copy] Genome Biology, Vol. 10, No. 6. (12 June 2009), R63. by Jose P. Alvarez, Chris Sanford, John Parkinson posted to networks modularity metabolic evolution by carlk on 2009-10-03 00:42:43 as along with 9 people and 1 group venancio adampah bdessailly barriot biomcgary michaelbarton Winzer tomhebbron grahamc Orengo Group Journal Picks
	Structure discovery in PPI networks using pattern-based network decomposition. [My Copy] Bioinformatics (Oxford, England), Vol. 25, No. 14. (15 July 2009), pp. 1814-1821. by Philip Bachman, Ying Liu posted to networks modules moduledetection modularity model-based clustering by carlk on 2009-10-03 00:41:20 as along with 3 people apocapoc grahamc colmryan
	The modularity of pollination networks [My Copy] Proceedings of the National Academy of Sciences, Vol. 104, No. 50. (11 December 2007), pp. 19891-19896. by Jens M. Olesen, Jordi Bascompte, Yoko L. Dupont, Pedro Jordano posted to networks moduledetection modularity clustering by carlk on 2009-10-03 00:39:00 as along with 1 person kubyaddi
	Modulated modularity clustering as an exploratory tool for functional genomic inference. [My Copy] PLoS genetics, Vol. 5, No. 5. (8 May 2009), e1000479. by Eric A. Stone, Julien F. Ayroles posted to networks modularity clustering by carlk on 2009-10-03 00:38:02 as along with 4 people and 1 group rdiaz theodorejmorgan roys tmmurali Morgan Lab-KSU
	Modularity and community structure in networks [My Copy] Proceedings of the National Academy of Sciences, Vol. 103, No. 23. (6 June 2006), pp. 8577-8582. by M. E. J. Newman posted to social-networks networks modularity by gagliol on 2009-10-02 13:01:04 as along with 32 people and 4 groups houniao007 spool jago thegoose tnhh daforerog pdlug senseable-urb tomhebbron dakelley rsantana orahcio vtraag dartar aqeel ChaTo jfr yas balicea ddahlem cmm fukken kubyaddi adriandefroment gcalda hannu marcio phreeza Diego_Prada carlk ellakat jjray complex networks T_lab FAB-lab ThinkTank
	Proteome survey reveals modularity of the yeast cell machinery [My Copy] Nature, Vol. 440, No. 7084. (22 January 2006), pp. 631-636. by Anne-Claude Gavin, Patrick Aloy, Paola Grandi, et al.Roland Krause, Markus Boesche, Martina Marzioch, Christina Rau, Lars J. Jensen, Sonja Bastuck, Birgit Dumpelfeld, Angela Edelmann, Marie-Anne Heurtier, Verena Hoffman, Christian Hoefert, Karin Klein, Manuela Hudak, Anne-Marie Michon, Malgorzata Schelder, Markus Schirle, Marita Remor, Tatjana Rudi, Sean Hooper, Andreas Bauer, Tewis Bouwmeester, Georg Casari, Gerard Drewes, Gitte Neubauer, Jens M. Rick, Bernhard Kuster, Peer Bork, Robert B. Russell, Giulio Superti-Furga posted to yeast topology proteome network modularity by tomhebbron on 2009-10-01 13:05:14 as along with 30 people and 10 groups ajbattle mgomes Scis0000002 lawraga bicko saket Yanno ana Borelli lfriedl ccots jmeppley chad_davis balajis xico shantanu nirfriedman balabu dgront noano koller ruvido nicoleq lpfernandes phoenixzxl larsjuhljensen ellakat frohike carlk ethkim structural_bioinformatics kdl MathBio Biostatistics Bioinformatics microRNA Computational_Systems_Biology EvolutionaryComputation Computational-Neurobiology WetBiology
	From molecular to modular cell biology [My Copy] Nature, Vol. 402, No. 6761 Suppl. (02 December 1999), pp. C47-C52. by Leland H. Hartwell, John J. Hopfield, Stanislas Leibler, Andrew W. Murray posted to review module_rewiring module modularity evolutionary_constraint evolution by biomcgary on 2009-09-30 21:57:46 as along with 26 people and 8 groups dagmar poirel bertelsen Scis0000002 daforerog jporternj chihchun_chen babakap AurelienMazurie rhem1224 balajis nuke2005 rubendrr wnpx i41m adepace javierFellow mmt mirzazadeh carmaus dejori carlk awooga tvdbulck vsausg dragonrez EisenLab TCR_Signaling cytoskeleton-and-afm SysbioMPI-TCells dIEMoSIRIS ic4 generif_paper MoSi-Rostock
	The origins and evolution of functional modules: lessons from protein complexes. [My Copy] Philosophical transactions of the Royal Society of London. Series B, Biological sciences, Vol. 361, No. 1467. (29 March 2006), pp. 507-517. by Jose B. Pereira-Leal, Emmanuel D. Levy, Sarah A. Teichmann posted to robustness protein-protein_interaction network_evolution network module_rewiring module modularity essentiality by biomcgary on 2009-09-30 21:50:29 as along with 6 people saket agustinarce bicko choonpeng cjeans cmzmasek
	Spectral tripartitioning of networks [My Copy] (19 Aug 2009) by Thomas Richardson, Peter J. Mucha, Mason A. Porter posted to modularity community by AaronMcDaid on 2009-09-27 01:12:03 as along with 1 person vtraag
	Fast unfolding of communities in large networks [My Copy] (25 Jul 2008) by Vincent D. Blondel, Jean-Loup Guillaume, Renaud Lambiotte, Etienne Lefebvre posted to modularity community_detection by Kovanen on 2009-09-23 14:20:25 as along with 9 people and 1 group hrotsos mussi jsaramak AaronMcDaid madiator stephaneclinchant ldietz ganden elsantosneto Networked Systems Lab
	Modularity and community detection in bipartite networks. [My Copy] Physical review. E, Statistical, nonlinear, and soft matter physics, Vol. 76, No. 6 Pt 2. (December 2007) by Michael J. Barber posted to modularity community bipartite by AaronMcDaid on 2009-09-17 18:08:39 as
	Community detection in complex networks using extremal optimization [My Copy] Physical Review E, Vol. 72, No. 2. (24 Aug 2005), 027104. by Jordi Duch, Alex Arenas posted to modularity community algorithm by AaronMcDaid on 2009-09-17 18:01:51 as along with 4 people and 1 group jmenche librain rsantana vtraag LIBrain
	Post-Processing Hierarchical Community Structures: Quality Improvements and Multi-scale View [My Copy] (9 Aug 2006) by Pascal Pons posted to multiscale modularity community by AaronMcDaid on 2009-09-16 18:43:17 as
	Finding community structure in very large networks [My Copy] (30 Aug 2004) by Aaron Clauset, M. E. J. Newman, Cristopher Moore posted to modularity community algorithm by AaronMcDaid on 2009-09-16 17:44:01 as along with 38 people and 10 groups makrehchi jasonn Kovanen diamantis theshadowhost senseable-urb hubcite korakot cantupaz pdlug breyten momonga nkorf ldietz lfriedl skyebend kei_s bigbossman merazzle xpontus mattjb livingthingdan mmartin dbatorski azygmunt jiong jaspervoskuilen gaudan sparikh andreacapocci jmarcelino warner outlier marcio dpf apwesolowski ganden orahcio Philosophy_of_Information Blog_and_Wiki_Research kdl IS-Lab Semantic-Social-Networks ComplexAdaptiveSystems DSTO-CAS ilps livingthing AGH-IISG
	Modularity optimization in community detection of complex networks [My Copy] EPL (Europhysics Letters), Vol. 87, No. 3. (2009), 38002. by X. S. Zhang, R. S. Wang, Y. Wang, et al.J. Wang, Y. Qiu, L. Wang, L. Chen posted to optimization network modularity graphs by rsantana on 2009-09-16 15:16:20 as along with 1 person Bolozna
	On Finding Graph Clusterings with Maximum Modularity [My Copy] Graph-Theoretic Concepts in Computer Science (2007), pp. 121-132. by Ulrik Brandes, Daniel Delling, Marco Gaertler, et al.Robert Görke, Martin Hoefer, Zoran Nikoloski, Dorothea Wagner posted to modularity community by AaronMcDaid on 2009-09-16 13:31:58 as along with 2 people vtraag lawraga
	Line graphs, link partitions, and overlapping communities [My Copy] Physical Review E (Statistical, Nonlinear, and Soft Matter Physics), Vol. 80, No. 1. (2009), 016105. by T. S. Evans, R. Lambiotte posted to overlapping modularity community by AaronMcDaid on 2009-09-16 12:31:01 as along with 2 people jsaramak Kovanen
	Protein sectors: evolutionary units of three-dimensional structure. [My Copy] Cell, Vol. 138, No. 4. (21 August 2009), pp. 774-786. by Najeeb Halabi, Olivier Rivoire, Stanislas Leibler, Rama Ranganathan posted to structure secondary_structure modularity by pablocarb on 2009-09-15 10:07:09 as along with 10 people and 1 group yyfwuhan cmzmasek dgront robfsouza pansapiens vvoorr biomcgary dayjm jwm jbhiatt Marcotte_Lab
	Automatic modularity conformance checking [My Copy] In ICSE '08: Proceedings of the 30th international conference on Software engineering (2008), pp. 411-420. by Sunny Huynh, Yuanfang Cai, Yuanyuan Song, Kevin Sullivan posted to modules modularity by buchgeher on 2009-09-09 13:38:19 as along with 1 person andreff
	Spontaneous emergence of modularity in cellular networks [My Copy] Journal of The Royal Society Interface, Vol. 5, No. 18. (6 January 2008), pp. 129-133. by Ricard V. Solé, Sergi Valverde posted to robust organization networks modularity modular heterogeneous evolution emergent-properties by bertelsen on 2009-09-06 00:14:20 as along with 4 people and 2 groups mattjb smgomez stefanoallesina mjoach ComplexAdaptiveSystems DSTO-CAS
	Harnessing nature's toolbox: regulatory elements for synthetic biology [My Copy] Journal of The Royal Society Interface, Vol. 6, No. Suppl 4. (6 August 2009), pp. S535-S546. by Patrick M. Boyle, Pamela A. Silver posted to systems-biology synthetic-biology modularity by bertelsen on 2009-09-05 17:11:47 as along with 1 person druvus
	Community Structure in Directed Networks [My Copy] Physical Review Letters, Vol. 100, No. 11. (2008), 118703. by E. A. Leicht, M. E. J. Newman posted to modularity directed by adamgyenge on 2009-09-05 10:51:33 as along with 6 people vtraag kubyaddi cgaugain cfelipesp Borelli orahcio
	Impacts of yeast metabolic network structure on enzyme evolution [My Copy] Genome Biology, Vol. 8, No. 8. (09 August 2007), 407. by Chenqi Lu, Ze Zhang, Lindsey Leach, M. J. Kearsey, Z. W. Luo posted to modularity metabolism abcmeth_article by cgaugain on 2009-09-02 15:42:50 as
	Using dependency model to support software architecture evolution [My Copy] Automated Software Engineering - Workshops, 2008. ASE Workshops 2008. 23rd IEEE/ACM International Conference on In Automated Software Engineering - Workshops, 2008. ASE Workshops 2008. 23rd IEEE/ACM International Conference on (2008), pp. 82-91. by H. P. Breivold, I. Crnkovic, R. Land, S. Larsson posted to modularity lattix dependency-analysis cbsd by buchgeher on 2009-09-01 08:19:45 as
	Towards reusable components with aspects: an empirical study on modularity and obliviousness [My Copy] In ICSE '08: Proceedings of the 30th international conference on Software engineering (2008), pp. 91-100. by Kevin Hoffman, Patrick Eugster posted to modularity aop _result_low _relevance_high _idea_medium 2008 by andreff on 2009-08-31 09:12:27 as along with 2 people khatchad jsj8444
	Reflections on the virtues of modularity: a case study in linux security modules [My Copy] Software: Practice and Experience, Vol. 9999, No. 9999. (2009), n/a. by Andrew Blaich, Douglas Thain, Aaron Striegel posted to security modularity lsm linux by ajholanda on 2009-08-27 12:27:22 as along with 1 person recluze
	Emergent Network Structure, evolvable Robustness and non-linear Effects of Point Mutations in an Artificial Genome Model [My Copy] (25 Aug 2009) by Thimo Rohlf, Christopher R. Winkler posted to robustness network mutation modularity genome evolution by jjray on 2009-08-26 15:47:22 as along with 1 person sigoldberg1
	Modular software design with crosscutting interfaces [My Copy] Software, IEEE In Software, IEEE, Vol. 23, No. 1. (2006), pp. 51-60. by W. G. Griswold, M. Shonle, K. Sullivan, et al.Y. Song, N. Tewari, Y. Cai, H. Rajan posted to modularity aop _result_medium _relevance_high _idea_high 2006 by andreff on 2009-08-21 10:21:16 as along with 4 people and 1 group mshonle khatchad cameleon911 rdyer Laboratory for Software Design
	Elucidating the murine brain transcriptional network in a segregating mouse population to identify core functional modules for obesity and diabetes [My Copy] Journal of Neurochemistry, Vol. 97, No. s1. (15 March 2006), pp. 50-62. by Pek Y. Lum, Yanqing Chen, Jun Zhu, et al.John Lamb, Shlomo Melmed, Susanna Wang, Tom A. Drake, Aldons J. Lusis, Eric E. Schadt posted to qtl population_genetics plasticity obesity network_genetic network module modularity genotype-phenotype_map gene_expression eqtl disease diabetes by biomcgary on 2009-08-20 21:58:39 as along with 2 people ccots caseybrown
	Fluid AOP join point models [My Copy] In OOPSLA '06: Companion to the 21st ACM SIGPLAN symposium on Object-oriented programming systems, languages, and applications (2006), pp. 712-713. by Terry Hon, Gregor Kiczales posted to modularity aop _result_medium _relevance_medium _idea_high 2006 by andreff on 2009-08-18 09:57:05 as
	Modularity of stress response evolution [My Copy] Proceedings of the National Academy of Sciences, Vol. 105, No. 21. (27 May 2008), pp. 7500-7505. by Amoolya H. Singh, Denise M. Wolf, Peggy Wang, Adam P. Arkin posted to stress_genes module_rewiring module modularity evolution by biomcgary on 2009-08-15 20:11:26 as along with 4 people roys erel10 deanmalmgren Retchless
	Spontaneous evolution of modularity and network motifs [My Copy] Proceedings of the National Academy of Sciences of the United States of America, Vol. 102, No. 39. (27 September 2005), pp. 13773-13778. by Nadav Kashtan, Uri Alon posted to biological_networks modularity by roys on 2009-08-11 05:36:18 as along with 21 people and 7 groups rsantana vtraag anphony ocs saket mcphee marimo monod Borelli alexg i41m cmm Peterfine javierFellow rgb mattjb rebeccamancy cwr phreeza stefanoallesina carlk Modularity in evolutionary algorithms MathBio FAB-lab ComplexAdaptiveSystems pileWorks DSTO-CAS ColDyn
	Community detection algorithms: a comparative analysis [My Copy] (7 Aug 2009) by Andrea Lancichinetti, Santo Fortunato posted to modularity by deanmalmgren on 2009-08-10 12:26:41 as along with 4 people marinari Bolozna Kovanen apocapoc
	Opinion and community formation in coevolving networks [My Copy] (4 Nov 2009) by Gerardo Iñiguez, János Kertész, Kimmo K. Kaski, R. A. Barrio posted to information_diffusion modularity network_evolution by deanmalmgren on 2009-08-10 12:26:28 as
	Phase of Ising spins on modular networks analogous to social polarization [My Copy] Physical Review E (Statistical, Nonlinear, and Soft Matter Physics), Vol. 80, No. 2. (2009), 025101. by Subinay Dasgupta, Raj K. Pan, Sitabhra Sinha posted to information_diffusion modularity social_network by deanmalmgren on 2009-08-10 02:07:18 as
	Synthetic protein scaffolds provide modular control over metabolic flux [My Copy] Nature Biotechnology, Vol. 27, No. 8. (02 August 2009), pp. 753-759. by John E. Dueber, Gabriel C. Wu, G. Reza Malmirchegini, et al.Tae S. Moon, Christopher J. Petzold, Adeeti V. Ullal, Kristala L. J. Prather, Jay D. Keasling posted to enzyme metabolism modularity module protein-protein_interaction protein_engineering regulatory_network scaffold_protein by biomcgary on 2009-08-07 17:32:12 as along with 6 people abhishek_tiwari dbikard grahamc phoenixzxl kevinchannon jdoconnell
	Toward a Product System Modularity Construct: Literature Review and Reconceptualization [My Copy] Engineering Management, IEEE Transactions on In Engineering Management, IEEE Transactions on, Vol. 54, No. 2. (2007), pp. 219-240. by F. Salvador posted to 2007 _relevance_high _result_low field_guide modularity by andreff on 2009-08-07 11:49:45 as

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network	109
evolution	85
networks	73
community	44
modules	37
cognition	33
algorithm	28
_relevance_high	25
community_detection	24
clustering	23
complexity	23
biology	20
development	20
probmod	18
composition	17
_idea_high	16
_result_medium	16
modeling	16
theory_of_mind	16
community-detection	15
review	15
simulation	15
complex	14
architecture	13
complex_network	13
metabolism	13
decomposition	12
modelling	12
robustness	12
_idea_medium	11
design	11
language	11
systems_biology	11
yeast	11
evolvability	10
interactions	10
_result_low	9
communities	9
information	9
information_diffusion	9
interaction-network	9
modular	9
module	9
network_evolution	9
psychology	9
software	9
weighted	9
aop	8
bipartite	8
community_analysis	8
gene-networks	8
gene-regulation	8
graphs	8
grn	8
network_structure	8
software-engineering	8
sysbio	8
systems-biology	8
adaptation	7
genericity	7
genome	7
graph	7
hiding	7
interoperability	7
learning	7
protein	7
protein-protein	7
synthetic-biology	7
systems	7
_relevance_medium	6
_result_high	6
analysis	6
betweenness	6
child	6
counterfactual	6
directed	6
dynamics	6
engineering	6
heterogeneity	6
hierarchy	6
metrics	6
product-platform	6
soc	6
theory	6
2006	5
2007	5
ai	5
artificial	5
cluster	5
components	5
eigenvector	5
eni	5
fodor	5
metabolic	5
models	5
oop	5
social_networks	5
statistics	5
survey	5
topology	5

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