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	Scale-free flow of life: on the biology, economics, and physics of the cell. [My Copy] Theoretical biology & medical modelling, Vol. 6, No. 1. (05 May 2009), 6. by Alexei Kurakin posted to thermodynamics scale-free review physics organization nonequilibrium multi-scale cell-biology biology by bertelsen on 2009-11-23 21:58:16 as along with 2 people guhjy VGreiff
	Simulating non-small cell lung cancer with a multiscale agent-based model [My Copy] Theoretical Biology and Medical Modelling, Vol. 4, No. 1. (21 December 2007), 50. by Zhihui Wang, Le Zhang, Jonathan Sagotsky, Thomas Deisboeck posted to spatio-temporal simulation signal-transduction phenotype pathway multi-scale molecular modelling lung intracellular epidermal_growth_factor dynamics chemotactic cell-migration cancer agent-based by bertelsen on 2009-11-23 21:45:02 as
	Local cell metrics: a novel method for analysis of cell-cell interactions [My Copy] BMC Bioinformatics, Vol. 10, No. 1. (2009), 350. by Jing Su, Pedro Zapata, Chien C. Chen, J. Carson Meredith posted to tissue-level regulation probabilistic multi-scale modelling metric local imaging histological environment development cell-population cell-interaction cancer biology bayesian by bertelsen on 2009-11-23 20:54:10 as along with 1 person kevinzheng1983
	Models and computational strategies linking physiological response to molecular networks from large-scale data. [My Copy] Philosophical transactions. Series A, Mathematical, physical, and engineering sciences, Vol. 366, No. 1878. (13 September 2008), pp. 3067-3089. by Fernando Ortega, Katrin Sameith, Nil Turan, et al.Russell Compton, Victor Trevino, Marina Vannucci, Francesco Falciani posted to systems-biology review physiology pathways networks multi-scale molecular modularity models integration complexity by bertelsen on 2009-11-18 20:26:07 as along with 2 people aviad_work cswinburne
	Definition and application of metaclasses in an object-oriented database model [My Copy] Data Engineering, 1993. Proceedings. Ninth International Conference on (06 August 2002), pp. 373-380. by J. Goers, A. Heuer posted to multi-scale multi-level meta_model db by dagmar on 2009-11-04 12:57:58 as
	Thermodynamic Limit of a Nonequilibrium Steady State: Maxwell-Type Construction for a Bistable Biochemical System [My Copy] Physical Review Letters, Vol. 103, No. 14. (2009), 148103. by Hao Ge, Hong Qian posted to thermodynamics systems-biology stochastic steady-state stability robustness nonequilibrium multi-scale model macroscopic fluctuation emergent-properties chemical-master-equation cell-biology biochemical by bertelsen on 2009-10-06 21:06:38 as along with 1 person jjray
	From signatures to models: understanding cancer using microarrays [My Copy] Nature Genetics, Vol. 37 Suppl (01 June 2005), pp. S38-S45. by Eran Segal, Nir Friedman, Naftali Kaminski, Aviv Regev, Daphne Koller posted to transcription signatures processes networks multi-scale molecular modules modular models microarray mechanistic gene-regulation disease comparative cancer by bertelsen on 2009-10-05 15:56:21 as along with 14 people and 1 group frohike chasmand roys lwaldron cswinburne aalibes textoris troels_marstrand wnpx nirfriedman rdiaz sampath shikin srp33 GeneGo
	Liquid-crystal transitions: A first-principles multiscale approach [My Copy] Physical Review E (Statistical, Nonlinear, and Soft Matter Physics), Vol. 80, No. 3. (10 September 2009), 031703. by Z. Shreif, S. Pankavich, P. Ortoleva posted to transition phase multi-scale model liquid crystal analytic by michaelbussmann on 2009-10-01 16:42:13 as
	Bioinformatics, multiscale modeling and the IUPS Physiome Project [My Copy] Brief Bioinform, Vol. 9, No. 4. (1 July 2008), pp. 333-343. by Peter J. Hunter, Edmund J. Crampin, Poul M. F. Nielsen posted to systems-biology physiome multi-scale modelling bioinformatics by bertelsen on 2009-09-21 15:45:09 as along with 2 people vgurev guhjy
	Could there be a Synthesis between Western and Oriental Medicine, and with Sasang Constitutional Medicine in Particular? [My Copy] eCAM, Vol. 6, No. suppl_1. (1 September 2009), pp. 5-10. by Denis Noble posted to western systems-biology synthesis science philosophy oriental multi-scale medicine by bertelsen on 2009-09-21 12:53:27 as along with 1 person Jakujo
	The Virtual Kidney: an eScience interface and Grid portal [My Copy] Physical and Engineering Sciences, Vol. 367, No. 1896. (13 June 2009), pp. 2141-2159. by Peter J. Harris, Rajkumar Buyya, Xingchen Chu, et al.Tom Kobialka, Ed Kazmierczak, Robert Moss, William Appelbe, Peter J. Hunter, S. Randall Thomas posted to visualization systems-biology simulation physiology multi-scale model kidney integrative grid-computing experimental-design database computational-biology by bertelsen on 2009-09-20 22:22:13 as
	Creation and implications of a phenome-genome network. [My Copy] Nature biotechnology, Vol. 24, No. 1. (10 January 2006), pp. 55-62. by Atul J. Butte, Isaac S. Kohane posted to protein-expression phenotype phenome network multi-scale measurements genome gene-expression experiment environment drug-discovery associations by bertelsen on 2009-09-15 20:15:51 as along with 11 people and 2 groups frohike daforerog BioGeek bpb okarsligil balajis wnpx tag elsiatcase eukfn guhjy Bioinformatics metric_embeddings
	The virtual cell--a candidate co-ordinator for 'middle-out' modelling of biological systems [My Copy] Brief Bioinform, Vol. 10, No. 4. (1 July 2009), pp. 450-461. by Dawn C. Walker, Jennifer Southgate posted to systemic-computation systems-biology review noise multi-scale modelling heterogeneity emergent-properties computational-biology complexity cellular-automata cell-biology cell agent-based by bertelsen on 2009-09-06 21:01:34 as along with 4 people maburkitt sandfire reyez fgibson
	Modeling the Heart--from Genes to Cells to the Whole Organ [My Copy] Science, Vol. 295, No. 5560. (1 March 2002), pp. 1678-1682. by Denis Noble posted to systems-biology review physiology organ multi-scale modelling heart genes cells by bertelsen on 2009-09-06 20:53:45 as along with 6 people and 1 group bruno reyez brocktice eweaver maburkitt chihchun_chen TulaneCEP
	Towards whole-organ modelling of tumour growth [My Copy] Progress in Biophysics and Molecular Biology, Vol. 85, No. 2-3. (July 2004), pp. 451-472. by T. Alarcon posted to tumour-growth review organ multi-scale modelling integrative drug-delivery cancer by bertelsen on 2009-09-06 20:04:17 as along with 1 person glyg
	Kinetic laws, phase–phase expansions, renormalization group, and INR calibration [My Copy] Proceedings of the National Academy of Sciences, Vol. 106, No. 16. (21 April 2009), pp. 6465-6470. by Marcel O. Vlad, Alexandru D. Corlan, Federico Morán, Rainer Spang, Peter Oefner, John Ross posted to renormalization-group-analysis reactions rate-law probabilistic power-laws multi-scale mathematical kinetic emergent-properties chemical biochemical approximation anlaysis analysis allometric by bertelsen on 2009-09-06 16:27:05 as
	Systems biology and the heart [My Copy] Biosystems, Vol. 83, No. 2-3. (February 2006), pp. 75-80. by D. Noble posted to systems-biology mutations multi-scale modelling heart by bertelsen on 2009-09-06 16:12:50 as
	Renormalization group analysis of the small-world network model [My Copy] Physics Letters A, Vol. 263, No. 4-6. (6 December 1999), pp. 341-346. by M. Newman posted to transformation simulation renormalization-group-analysis network multi-scale model analysis by bertelsen on 2009-09-06 14:19:57 as along with 2 people and 2 groups dylanwalker amac Soslab CooperationStudies
	Multiscale modeling of biomolecular systems: in serial and in parallel. [My Copy] Current opinion in structural biology, Vol. 17, No. 2. (April 2007), pp. 192-198. by Gary S. Ayton, Will G. Noid, Gregory A. Voth posted to systems-biology systems structural-biology review multi-scale molecular models modelling methods hybrid hierarchical bridges biophysics biomolecular by bertelsen on 2009-09-05 11:21:29 as along with 5 people jonathancooper Elena_Zubova RamuAnandakrishnan aqeel choonpeng
	Integration from proteins to organs: the Physiome Project. [My Copy] Nature reviews. Molecular cell biology, Vol. 4, No. 3. (March 2003), pp. 237-243. by Peter J. Hunter, Thomas K. Borg posted to systems-biology review multi-scale integrative hypothesis human framework biophysics biochemical anatomy by bertelsen on 2009-09-05 10:51:25 as along with 2 people jonathancooper danlea
	Strategies for the physiome project. [My Copy] Annals of biomedical engineering, Vol. 28, No. 8. (August 2000), pp. 1043-1058. by J. B. Bassingthwaighte posted to virtual_human systems-biology review quantitative physiology pathology networks multi-scale modules model human database complexity biochemical by bertelsen on 2009-09-04 21:00:17 as
	Multiscale modeling of biological pattern formation. [My Copy] Current topics in developmental biology In Multiscale Modeling of Developmental Systems, Vol. 81 (2008), pp. 435-460. by R. Grima posted to tissue-level spatial-scale pattern multi-scale modeling mathematical cell-biology biology by bertelsen on 2009-09-04 20:56:18 as
	Modelling biological complexity: a physical scientist's perspective [My Copy] Journal of The Royal Society Interface, Vol. 2, No. 4. (22 September 2005), pp. 267-280. by Peter V. Coveney, Philip W. Fowler posted to systems-biology systemic-computation simulation self-organization physical networks multi-scale modelling methodology integrative hybrid hierarchical emergent-properties computational-biology complexity biology by bertelsen on 2009-09-04 20:25:36 as along with 6 people jonathancooper Scis0000002 PaulSherwood6 paulschlesinger jjray danscott
	A Bayesian statistics approach to multiscale coarse graining [My Copy] The Journal of Chemical Physics, Vol. 129, No. 21. (2008), 214114. by Pu Liu, Qiang Shi, Hal Daumé, Gregory A. Voth posted to time thermodynamics systems space physical multi-scale modelling large-scale force-field coarse-grained chemical bayesian atom by bertelsen on 2009-09-04 20:07:28 as along with 1 person tomweingarten
	Introduction of an agent-based multi-scale modular architecture for dynamic knowledge representation of acute inflammation [My Copy] Theoretical Biology and Medical Modelling, Vol. 5, No. 1. (27 May 2008), 11. by Gary An posted to systemic-computation software multi-scale modular modeling introduction inflammation dynamic agent-based by bertelsen on 2009-09-01 16:09:18 as
	Efficient step size selection for the tau-leaping simulation method [My Copy] The Journal of Chemical Physics, Vol. 124, No. 4. (2006), 044109. by Yang Cao, Daniel T. Gillespie, Linda R. Petzold posted to tau-leaping multi-scale by vladimirov on 2009-08-28 10:51:49 as along with 3 people sjayanthi RamuAnandakrishnan jporternj
	Approximate accelerated stochastic simulation of chemically reacting systems [My Copy] The Journal of Chemical Physics, Vol. 115, No. 4. (2001), pp. 1716-1733. by Daniel T. Gillespie posted to tau-leaping multi-scale by vladimirov on 2009-08-28 10:48:07 as along with 3 people fierykylin dagmar matthewhflamm
	Multiscale agent-based cancer modeling [My Copy] Journal of Mathematical Biology, Vol. 58, No. 4. (1 April 2009), pp. 545-559. by Le Zhang, Zhihui Wang, Jonathan A. Sagotsky, Thomas S. Deisboeck posted to tumor systems-biology systemic-computation simulation network multi-scale modeling integrative insilico cancer agent-based by bertelsen on 2009-08-27 13:14:53 as along with 1 person frohike
	Renormalization group and singular perturbations: Multiple scales, boundary layers, and reductive perturbation theory [My Copy] Physical Review E, Vol. 54, No. 1. (Jul 1996), pp. 376-394. by Lin Y. Chen, Nigel Goldenfeld, Y. Oono posted to singular-perturbation renormalization-group multi-scale boundary-layer by chiufanlee on 2009-08-24 14:11:02 as
	Reduction and solution of the chemical master equation using time scale separation and finite state projection [My Copy] The Journal of Chemical Physics, Vol. 125, No. 20. (2006), 204104. by Slaven Peleš, Brian Munsky, Mustafa Khammash posted to method multi-scale reaction theory by mhellmann on 2009-07-10 15:59:45 as
	Hierarchical search for image matching [My Copy] Decision and Control including the 15th Symposium on Adaptive Processes, 1976 IEEE Conference on In Decision and Control including the 15th Symposium on Adaptive Processes, 1976 IEEE Conference on, Vol. 15 (1976), pp. 791-796. by E. L. Hall, Lt, R. Y. Wong posted to multi-scale by jmarkow on 2009-06-30 22:52:42 as
	Efficiency of a model human image code. [My Copy] Journal of the Optical Society of America, Vol. 4, No. 12. (December 1987), pp. 2401-2417. by A. B. Watson posted to multi-scale pyramid by jmarkow on 2009-06-30 22:41:32 as
	Object Recognition from Local Scale-Invariant Features [My Copy] Computer Vision, IEEE International Conference on In Computer Vision, 1999. The Proceedings of the Seventh IEEE International Conference on, Vol. 2 (06 August 1999), pp. 1150-1157 vol.2. by D. G. Lowe posted to image-processing multi-scale object-recognition sift by jmarkow on 2009-06-30 19:59:04 as along with 22 people banus simogasp mzabidi quam haiyeong etidey flordepapel georgeb axin pick600 austinreiter inayatkh kittipat weiweiguo m0ta ferryzhou egozi hawesie CAVIAR tshr doubleshow miyaki
	A hexagonal orthogonal-oriented pyramid as a model of image representation in visual cortex. [My Copy] IEEE transactions on bio-medical engineering, Vol. 36, No. 1. (January 1989), pp. 97-106. by A. B. Watson, A. J. Ahumada posted to model multi-scale pyramid by jmarkow on 2009-06-30 18:22:40 as
	Orthogonal pyramid transforms for image coding [My Copy] In Society of Photo-Optical Instrumentation Engineers (SPIE) Conference Series, Vol. 845 (January 1987) by E. H. Adelson, E. Simoncelli, R. Hingorani edited by T. R. Hsing posted to image-processing multi-scale pyramid by jmarkow on 2009-06-30 18:20:42 as
	Equivalent-noise model for contrast detection and discrimination [My Copy] Journal of the Optical Society of America, Vol. 2, No. 7. (1 July 1985), pp. 1133-1139. by Jr Ahumada, A. B. Watson posted to contrast equivalent-noise model multi-scale by jmarkow on 2009-06-26 22:02:50 as
	The structure of images [My Copy] Biological Cybernetics, Vol. 50, No. 5. (7 August 1984), pp. 363-370. by Jan J. Koenderink posted to multi-scale scale-space by jmarkow on 2009-06-26 21:21:53 as along with 3 people ben500 carolh12 olyweb
	Face Recognition by Elastic Bunch Graph Matching [My Copy] IEEE Trans. Pattern Anal. Mach. Intell. In Pattern Analysis and Machine Intelligence, IEEE Transactions on, Vol. 19, No. 7. (1997), pp. 775-779. by L. Wiskott, J. M. Fellous, N. Kuiger, C. von der Malsburg posted to face-recognition multi-scale pyramid by jmarkow on 2009-06-26 18:15:09 as along with 4 people handee Warmonkey ksc91u thorgal
	The Design and Use of Steerable Filters [My Copy] IEEE Transactions on Pattern Analysis and Machine Intelligence In Pattern Analysis and Machine Intelligence, IEEE Transactions on, Vol. 13, No. 9. (1991), pp. 891-906. by W. T. Freeman, E. H. Adelson posted to multi-scale pyramid steerable-filter by jmarkow on 2009-06-26 00:59:56 as along with 11 people michaelfieseler doubleshow timotay zeppe tyler thorgal hayko bbabenko tpyl djoshea emreakbas
	Unsupervised Category Modeling, Recognition, and Segmentation in Images [My Copy] Pattern Analysis and Machine Intelligence, IEEE Transactions on In Pattern Analysis and Machine Intelligence, IEEE Transactions on, Vol. 30, No. 12. (2008), pp. 2158-2174. by S. Todorovic, N. Ahuja posted to multi-scale segmentation by jmarkow on 2009-06-24 05:06:14 as along with 1 person stober
	A segmentation-based predictive multiresolution image coder [My Copy] Image Processing, IEEE Transactions on In Image Processing, IEEE Transactions on, Vol. 4, No. 1. (1995), pp. 34-47. by Xiaolin Wu, Yonggang Fang posted to multi-scale segmentation by jmarkow on 2009-06-24 05:04:19 as
	Nonexpansive pyramid for image coding using a nonlinear filterbank [My Copy] Image Processing, IEEE Transactions on In Image Processing, IEEE Transactions on, Vol. 7, No. 2. (1998), pp. 246-252. by R. L. de Queiroz, D. A. F. Florencio, R. W. Schafer posted to multi-scale pyramid by jmarkow on 2009-06-24 05:03:20 as
	Image representations using multiscale differential operators [My Copy] Image Processing, IEEE Transactions on In Image Processing, IEEE Transactions on, Vol. 8, No. 12. (1999), pp. 1757-1771. by Yu P. Wang posted to multi-scale by jmarkow on 2009-06-24 05:01:30 as
	Centered pyramids [My Copy] Image Processing, IEEE Transactions on In Image Processing, IEEE Transactions on, Vol. 8, No. 9. (1999), pp. 1254-1264. by P. Brigger, F. Muller, K. Illgner, M. Unser posted to multi-scale pyramid quadtree by jmarkow on 2009-06-24 04:59:49 as
	Visual System Based on Artificial Retina for Motion Detection [My Copy] Systems, Man, and Cybernetics, Part B: Cybernetics, IEEE Transactions on In Systems, Man, and Cybernetics, Part B: Cybernetics, IEEE Transactions on, Vol. 39, No. 3. (2009), pp. 752-762. by F. Barranco, J. Diaz, E. Ros, Del posted to model motion-detection multi-scale by jmarkow on 2009-06-24 04:59:02 as
	A multiscale spatial filtering account of the White effect, simultaneous brightness contrast and grating induction [My Copy] Vision Research, Vol. 39, No. 26. (December 1999), pp. 4361-4377. by B. Blakeslee posted to multi-scale pyramid by jmarkow on 2009-06-23 20:53:14 as
	Similar mechanisms underlie simultaneous brightness contrast and grating induction [My Copy] Vision Research, Vol. 37, No. 20. (October 1997), pp. 2849-2869. by B. Blakeslee, M. Mccourt posted to multi-scale pyramid by jmarkow on 2009-06-23 20:52:28 as
	A multiscale spatial filtering account of the Wertheimer–Benary effect and the corrugated Mondrian [My Copy] Vision Research, Vol. 41, No. 19. (September 2001), pp. 2487-2502. by B. Blakeslee posted to multi-scale pyramid by jmarkow on 2009-06-23 20:50:59 as
	Oriented multiscale spatial filtering and contrast normalization: a parsimonious model of brightness induction in a continuum of stimuli including White, Howe and simultaneous brightness contrast [My Copy] Vision Research, Vol. 45, No. 5. (March 2005), pp. 607-615. by B. Blakeslee, W. Pasieka, M. Mccourt posted to multi-scale pyramid by jmarkow on 2009-06-23 20:49:48 as
	Discovering multi-level structures in bio-molecular data through the Bernstein inequality. [My Copy] BMC bioinformatics, Vol. 9 Suppl 2 (2008) by A. Bertoni, G. Valentini posted to basc clustering multi-scale stability by pbellec on 2009-05-12 22:37:00 as along with 2 people guhjy jfr

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