Tag mutation_rate [119 articles] Export

Recent papers classified by the tag mutation_rate.

	Determinants of Substitution Rates in Mammalian Genes: Expression Pattern Affects Selection Intensity but Not Mutation Rate [My Copy] Mol Biol Evol, Vol. 17, No. 1. (1 January 2000), pp. 68-70. by Laurent Duret, Dominique Mouchiroud posted to mutation_rate evolution by RamuAnandakrishnan on 2009-12-15 15:16:31 as along with 3 people gbloeb bjorns skumagai
	Robustness: mechanisms and consequences [My Copy] Trends in Genetics, Vol. 25, No. 9. (28 September 2009), pp. 395-403. by Joanna Masel,, Mark .. Siegal, posted to neutral_evolution mutational_robustness mutation_rate gene_network gene_duplication adaptive_processes by joebilkobailey on 2009-12-10 16:24:29 as along with 4 people heliopais abhishek_tiwari qwermish brembs
	Neutral evolution of mutational robustness [My Copy] Proc Natl Acad Sci U S A In Proceedings of the National Academy of Sciences of the United States of America, Vol. 96, No. 17. (17 August 1999), pp. 9716-9720. by Erik van Nimwegen, James P. Crutchfield, Martijn Huynen posted to neutral_evolution mutational_robustness mutation_rate by joebilkobailey on 2009-12-10 16:19:59 as along with 6 people and 1 group eldan operon alexisgallagher gokhan grisogono Spaans DSTO-CAS
	Genome evolution and adaptation in a long-term experiment with Escherichia coli [My Copy] Nature, Vol. 461, No. 7268. (18 October 2009), pp. 1243-1247. by Jeffrey E. Barrick, Dong S. Yu, Sung H. Yoon, et al.Haeyoung Jeong, Tae K. Oh, Dominique Schneider, Richard E. Lenski, Jihyun F. Kim posted to substitution_rate selection mutation_rate evolution bacteria by aprasad on 2009-12-02 19:32:38 as along with 34 people and 5 groups psique TorstenWaldminghaus gjuggler pmalkus dokky samubernard ilyashl biomcgary kintoki zwang jasontsai aaltenburger sawasthi nurban josepe tjandra venancio maren qayub Garamonfok yyfwuhan Asclepius dbikard nzm jjray djkt treangen lp2 operon diamantis michaelbarton druvus DrRichardBadge richardfranzese ronbun_2009au Pedro Martinez EvoDevo lab Barcelona iSEEM Journal picks BergmanLab
	Role of mutator alleles in adaptive evolution. [My Copy] Nature, Vol. 387, No. 6634. (12 June 1997), pp. 700-702. by F. Taddei, M. Radman, J. Maynard-Smith, B. Toupance, P. H. Gouyon, B. Godelle posted to mutations mutation_rate evolution by dbikard on 2009-11-25 09:07:39 as along with 4 people cambray rklancer christiw timflutre
	Avoiding dangerous missense: thermophiles display especially low mutation rates. [My Copy] PLoS genetics, Vol. 5, No. 6. (19 June 2009), e1000520. by John W. Drake posted to mutation_rate by jasontsai on 2009-11-04 14:17:39 as along with 4 people operon michaelbarton jjray bpcusack
	Human mutation rate associated with DNA replication timing [My Copy] Nat Genet, Vol. 41, No. 4. (April 2009), pp. 393-395. by John A. Stamatoyannopoulos, Ivan Adzhubei, Robert E. Thurman, Gregory V. Kryukov, Sergei M. Mirkin, Shamil R. Sunyaev posted to replication mutation_rate human by daveGerrard on 2009-10-27 15:49:18 as along with 11 people and 2 groups PaulaBO bmajoros coela benjaminsb polivares absterga cisevol Annab fenghezi megraw djkt JLab BergmanLab
	Natural Selection Fails to Optimize Mutation Rates for Long-Term Adaptation on Rugged Fitness Landscapes [My Copy] PLoS Comput Biol, Vol. 4, No. 9. (26 September 2008), e1000187. by Jeff Clune, Dusan Misevic, Charles Ofria, Richard E. Lenski, Santiago F. Elena, Rafael Sanjuán posted to optimisation mutation_rate fitness-landscape evolution adaptation by tomhebbron on 2009-10-20 09:33:58 as along with 5 people and 1 group VGreiff druvus cambray rebeccamancy dlobo GEB
	Accurate and fast methods to estimate the population mutation rate from error prone sequences [My Copy] BMC Bioinformatics, Vol. 10, No. 1. (11 August 2009), 247. by Bjarne Knudsen, Michael Miyamoto posted to next_generation mutation_rate by druvus on 2009-09-11 11:36:30 as along with 1 person zwang
	Changes in alternative splicing of human and mouse genes are accompanied by faster evolution of constitutive exons. [My Copy] Molecular biology and evolution, Vol. 22, No. 11. (1 November 2005), pp. 2198-2208. by Brian P. Cusack, Kenneth H. Wolfe posted to splicing_alternative splicing mutation_rate evolutionary_constraint evolution_rate biased_mutation by biomcgary on 2009-09-02 22:48:33 as along with 1 person and 1 group avilella Ensembl Compara citations
	Does Gene Translocation Accelerate the Evolution of Laterally Transferred Genes? [My Copy] Genetics, Vol. 182, No. 4. (1 August 2009), pp. 1365-1375. by Weilong Hao, G. Brian Golding posted to mutation_rate mutation_hotspot horizontal_gene_transfer evolution_rate biased_recombination biased_mutation by biomcgary on 2009-09-02 22:24:24 as along with 2 people and 1 group operon djkt iSEEM
	Human Y Chromosome Base-Substitution Mutation Rate Measured by Direct Sequencing in a Deep-Rooting Pedigree [My Copy] Current Biology, Vol. 19, No. 17. (15 September 2009), pp. 1453-1457. by Yali Xue,, Qiuju Wang,, Quan Long,, et al.Bee i. n. g. Ng,, Harold Swerdlow,, John Burton,, Carl Skuce,, Ruth Taylor,, Zahra Abdellah,, Yali Zhao, posted to sequencing mutation_rate human chromosome_y chromosome by biomcgary on 2009-09-02 19:46:06 as along with 3 people vingron chriswillmott greg
	Human Y Chromosome Base-Substitution Mutation Rate Measured by Direct Sequencing in a Deep-Rooting Pedigree [My Copy] Vol. 19, No. 17. (15 September 2009), pp. 1453-1457. by Yali Xue, Qiuju Wang, Quan Long, et al.Bee L. Ng, Harold Swerdlow, John Burton, Carl Skuce, Ruth Taylor, Zahra Abdellah, Yali Zhao, Daniel G. MacArthur, Michael A. Quail, Nigel P. Carter, Huanming Yang, Chris Tyler-Smith posted to mutation_rate evolution biology by vtraag on 2009-09-02 17:40:06 as along with 1 person giovanni
	Levels of naturally occurring DNA polymorphism correlate with recombination rates in D. melanogaster. [My Copy] Nature, Vol. 356, No. 6369. (9 April 1992), pp. 519-520. by D. J. Begun, C. F. Aquadro posted to variation recombination mutation_rate hitch-hiking evolutionary_constraint drosophila biased_recombination biased_mutation by biomcgary on 2009-08-20 22:19:35 as along with 1 person emptyhb
	Biased Gene Conversion and the Evolution of Mammalian Genomic Landscapes [My Copy] Annual Review of Genomics and Human Genetics, Vol. 10, No. 1. (16 July 2009), pp. 285-311. by Laurent Duret, Nicolas Galtier posted to evolution gene_conversion mutation_rate recombination substitution_rate by aprasad on 2009-08-10 12:58:25 as along with 3 people lindaodenthalhesse scmelton gjuggler
	Aneuploidy and Improved Growth Are Coincident but Not Causal in a Yeast Cancer Model [My Copy] PLoS Biol, Vol. 7, No. 7. (28 July 2009), e1000161. by Xin C. Li, John C. Schimenti, Bik K. Tye posted to aneuploidy cancer growth_rate mutation mutation_hotspot mutation_rate yeast by biomcgary on 2009-07-28 22:41:31 as along with 1 person Annab
	Single-nucleotide mutation rate increases close to insertions/deletions in eukaryotes. [My Copy] Nature, Vol. 455, No. 7209. (4 September 2008), pp. 105-108. by D. Tian, Q. Wang, P. Zhang, et al.H. Araki, S. Yang, M. Kreitman, T. Nagylaki, R. Hudson, J. Bergelson, J. Q. Chen posted to biased_mutation heterozygosity indel mutation_hotspot mutation_rate point_mutation by biomcgary on 2009-07-17 18:58:14 as along with 9 people and 1 group Annab aprasad dakelley zwang psique djkt caseybrown bpcusack gjuggler parkinson's disease references
	dUTP incorporation into genomic DNA is linked to transcription in yeast [My Copy] Nature, Vol. 459, No. 7250. (25 June 2009), pp. 1150-1153. by Nayun Kim, Sue Jinks-Robertson posted to biased_mutations biased_recombination frameshift homomers mutation mutation_rate nucleotide_repeats repetitive_sequence transcription by biomcgary on 2009-06-30 01:09:00 as along with 2 people absterga diaz0058
	Genomic Drift and Evolution of Microsatellite DNAs in Human Populations [My Copy] Mol Biol Evol, Vol. 26, No. 8. (1 August 2009), pp. 1835-1840. by Naoko Takezaki, Masatoshi Nei posted to genome_evolution genome_size microsatellite mutation_rate repeats by aprasad on 2009-05-05 15:51:21 as along with 4 people jsatkosk Fuzzer sameersoi nuin
	Why do human diversity levels vary at a megabase scale? [My Copy] Genome Res, Vol. 15, No. 9. (September 2005), pp. 1222-1231. by I. Hellmann, K. Prüfer, H. Ji, M. C. Zody, S. Pääbo, S. E. Ptak posted to genome mammals mutation_rate transposons by hdopazo on 2009-04-13 12:32:18 as along with 1 person aprasad
	A high observed substitution rate in the human mitochondrial DNA control region [My Copy] Nat Genet, Vol. 15, No. 4. (April 1997), pp. 363-368. by Thomas J. Parsons, David S. Muniec, Kevin Sullivan, et al.Nicola Woodyatt, Rosemary Alliston-Greiner, Mark R. Wilson, Dianna L. Berry, Koren A. Holland, Victor W. Weedn, Peter Gill, Mitchell M. Holland posted to empirical mitochondrial_dna mutation_rate by biomcgary on 2009-03-19 15:36:45 as
	Extremely High Mutation Rate of a Hammerhead Viroid [My Copy] Science, Vol. 323, No. 5919. (6 March 2009), 1308. by Selma Gago, Santiago F. Elena, Ricardo Flores, Rafael Sanjuan posted to mutation_rate ribozyme_hammerhead virus by biomcgary on 2009-03-18 21:57:43 as along with 2 people shuzhens kshundyak
	Cryptic Variation in the Human Mutation Rate [My Copy] PLoS Biology, Vol. 7, No. 2. (1 February 2009), e27. by Alan Hodgkinson, Emmanuel Ladoukakis, Adam Eyre-Walker posted to molecular_evolution mutation_rate by emptyhb on 2009-02-24 22:21:06 as along with 6 people xingxu leelarcombe rschulz biomcgary djkt gjuggler
	Mutation Patterns in the Human Genome: More Variable Than Expected [My Copy] PLoS Biol, Vol. 7, No. 2. (3 February 2009), e1000028. by Laurent Duret posted to cnv evolution genome human human-genome human_genome hzygo mutation mutation_rate popgen review snp variation by leelarcombe on 2009-02-24 11:36:42 as along with 7 people and 2 groups Garamonfok rdiaz barry idoerg aprasad djkt gjuggler structural_bioinformatics Bioinformatics
	The antimutator phenotype of E. coli mud is only apparent and results from delayed appearance of mutants. [My Copy] Mutation research, Vol. 480-481 (1 September 2001), pp. 71-75. by R. M. Schaaper, R. L. Dunn posted to mutation_rate repair by cambray on 2009-02-21 11:38:42 as
	Mismatch repair in the antimutator Escherichia coli mud. [My Copy] Mutation research, Vol. 522, No. 1-2. (28 January 2003), pp. 27-32. by S. Dzidić, M. Petranović posted to mutation_rate repair by cambray on 2009-02-21 11:37:56 as
	Antimutator mutants in bacteriophage T4 and Escherichia coli. [My Copy] Genetics, Vol. 148, No. 4. (April 1998), pp. 1579-1585. by R. M. Schaaper posted to mutation_rate repair by cambray on 2009-02-21 11:32:40 as
	The fate of microbial mutators. [My Copy] Microbiology (Reading, England), Vol. 148, No. Pt 5. (May 2002), pp. 1247-1252. by J. A. de Visser posted to clonal_interference mutation_rate recombination review by cambray on 2009-02-20 16:54:40 as
	Microbial genetics. The tinkerer's evolving tool-box. [My Copy] Nature, Vol. 387, No. 6634. (12 June 1997) by E. R. Moxon, D. S. Thaler posted to contingency_loci evolvability mutation_rate by cambray on 2009-02-20 12:22:25 as
	Evolution of mutation rates in bacteria [My Copy] Molecular Microbiology, Vol. 60, No. 4. (May 2006), pp. 820-827. by Erick Denamur, Ivan Matic posted to evolution mutation_rate recombination repair review by cambray on 2009-02-20 09:28:22 as
	A constant rate of spontaneous mutation in DNA-based microbes [My Copy] Proceedings of the National Academy of Sciences of the United States of America, Vol. 88, No. 16. (15 August 1991), pp. 7160-7164. by J. W. Drake posted to mutation_rate by cambray on 2009-02-19 14:30:29 as along with 1 person druvus
	Numt-Mediated Double-Strand Break Repair Mitigates Deletions during Primate Genome Evolution [My Copy] PLoS Genet, Vol. 4, No. 10. (24 October 2008), e1000237. by Einat Hazkani-Covo, Shay Covo posted to evolution indel indel_rate intrinsic_features mutation mutation_rate by aprasad on 2009-02-17 16:48:15 as along with 2 people dbensasson gokcumen
	What a difference a decade makes: insights into translesion DNA synthesis. [My Copy] Proceedings of the National Academy of Sciences of the United States of America, Vol. 104, No. 40. (2 October 2007), pp. 15591-15598. by W. Yang, R. Woodgate posted to mutation mutation_rate translesion by cambray on 2009-02-14 18:53:23 as
	DNA Replication Fidelity [My Copy] J. Biol. Chem., Vol. 279, No. 17. (23 April 2004), pp. 16895-16898. by Thomas A. Kunkel posted to mutation_rate replication review by cambray on 2009-02-13 16:34:49 as along with 2 people eyliu margaritis
	Perspective on Mutagenesis and Repair: The Standard Model and Alternate Modes of Mutagenesis [My Copy] Critical Reviews in Biochemistry and Molecular Biology, Vol. 40, No. 3. (June 2005), pp. 155-179. by Jeffrey Miller posted to evolution mutation mutation_rate by cambray on 2009-02-05 13:02:43 as
	Stress Management: How Cells Take Control of Their Transposons [My Copy] Molecular Cell, Vol. 27, No. 2. (20 July 2007), pp. 180-181. by Hirotaka Ebina, Henry L. Levin posted to evolvability mutation_rate stress transposition by cambray on 2009-02-05 12:44:59 as along with 2 people dchughes margaritis
	Microsatellites in the eukaryotic DNA mismatch repair genes as modulators of evolutionary mutation rate. [My Copy] Genome research, Vol. 11, No. 7. (July 2001), pp. 1145-1146. by D. K. Chang, D. Metzgar, C. Wills, C. R. Boland posted to contingency_loci mutation_rate repair by cambray on 2009-01-28 16:44:26 as
	Mutability and evolvability: Indirect selection for mutability [My Copy] Heredity, Vol. 99, No. current. (2007), pp. 123-124. by D. G. King, Y. Kashi posted to contingency_loci evolvability mutation_rate by cambray on 2009-01-28 10:58:01 as along with 1 person Facsiga
	Simple sequence repeats as advantageous mutators in evolution. [My Copy] Trends in genetics : TIG, Vol. 22, No. 5. (May 2006), pp. 253-259. by Yechezkel Kashi, David G. King posted to contingency_loci mutation_rate repeat review by cambray on 2009-01-28 10:44:57 as along with 6 people and 2 groups operon robfsouza gbloeb druvus dchughes rebeccamancy G4ID Genetics-of-Gambling
	Stabilization of the genome of the mismatch repair deficient Mycobacterium tuberculosis by context-dependent codon choice [My Copy] BMC Genomics, Vol. 9 (28 May 2008), 249. by Roger M. Wanner, Carolin Guethlein, Burkhard Springer, Erik C. Boettger, Martin Ackermann posted to codon_usage evolvability mutation_rate repair by cambray on 2009-01-27 15:46:40 as along with 1 person druvus
	DNA sequences shaped by selection for stability. [My Copy] PLoS genetics, Vol. 2, No. 2. (February 2006) by M. Ackermann, L. Chao posted to codon_usage comparative_genomic evolvability mutation_rate by cambray on 2009-01-27 15:44:00 as
	Cryptic simplicity in DNA is a major source of genetic variation. [My Copy] Nature, Vol. 322, No. 6080. (0 1986), pp. 652-656. by D. Tautz, M. Trick, G. A. Dover posted to history mutation_rate by cambray on 2009-01-27 15:17:22 as
	Fitness evolution and the rise of mutator alleles in experimental Escherichia coli populations. [My Copy] Genetics, Vol. 162, No. 2. (October 2002), pp. 557-566. by A. C. Shaver, P. G. Dombrowski, J. Y. Sweeney, T. Treis, R. M. Zappala, P. D. Sniegowski posted to experimental_evolution mutation_rate by cambray on 2009-01-26 09:56:30 as
	Mutators and sex in bacteria: conflict between adaptive strategies. [My Copy] Proceedings of the National Academy of Sciences of the United States of America, Vol. 97, No. 19. (12 September 2000), pp. 10465-10470. by O. Tenaillon, H. Le Nagard, B. Godelle, F. Taddei posted to mutation_rate by cambray on 2009-01-25 17:22:16 as
	Optimal Mutation Rates in Dynamic Environments [My Copy] (19 Apr 2000) by Martin Nilsson, Nigel Snoad posted to mutation_rate stress by cambray on 2009-01-25 17:19:00 as
	Genetic fidelity under harsh conditions: analysis of spontaneous mutation in the thermoacidophilic archaeon Sulfolobus acidocaldarius. [My Copy] Proceedings of the National Academy of Sciences of the United States of America, Vol. 98, No. 14. (3 July 2001), pp. 7928-7933. by D. W. Grogan, G. T. Carver, J. W. Drake posted to mutation_rate by cambray on 2009-01-22 09:32:04 as
	The rate and character of spontaneous mutation in Thermus thermophilus. [My Copy] Genetics, Vol. 180, No. 1. (September 2008), pp. 17-25. by Reena R. Mackwan, Geraldine T. Carver, Grace E. Kissling, John W. Drake, Dennis W. Grogan posted to mutation_rate by cambray on 2009-01-22 09:22:18 as
	The distribution of rates of spontaneous mutation over viruses, prokaryotes, and eukaryotes. [My Copy] Annals of the New York Academy of Sciences, Vol. 870 (18 May 1999), pp. 100-107. by J. W. Drake posted to mutation_rate by cambray on 2009-01-21 18:25:39 as along with 1 person operon
	Neutral mutations and neutral substitutions in bacterial genomes. [My Copy] Mol Biol Evol, Vol. 20, No. 12. (December 2003), pp. 2091-2096. by H. Ochman posted to mutation_rate by cambray on 2009-01-21 18:16:20 as along with 1 person bjorns
	Costs and benefits of high mutation rates: adaptive evolution of bacteria in the mouse gut. [My Copy] Science (New York, N.Y.), Vol. 291, No. 5513. (30 March 2001), pp. 2606-2608. by A. Giraud, I. Matic, O. Tenaillon, et al.A. Clara, M. Radman, M. Fons, F. Taddei posted to adaptation evolvability mutation_rate by cambray on 2009-01-21 16:22:02 as along with 1 person yyfwuhan

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evolution	36
human	18
indel	18
mutation	18
evolvability	14
cpg	11
genome_evolution	11
genome	10
human_genome	9
recombination	9
review	9
adaptation	8
repair	8
biased_mutation	7
comparative_genomics	7
mammals	7
selection	7
contingency_loci	6
conservation	5
neutral	5
snp	5
substitution_rate	5
variation	5
chimp	4
coding	4
drosophila	4
genome_size	4
molecular_evolution	4
mouse	4
mutations	4
neutral_evolution	4
positive_selection	4
replication	4
saccharomyces	4
adaptive_evolution	3
biased_recombination	3
cg	3
cns	3
directed_evolution	3
evolution_rate	3
gc	3
gene_conversion	3
isochore	3
mammal	3
mt	3
mutation_hotspot	3
poliv	3
polymorphism	3
stress	3
transposons	3
bacteria	2
clonal_interference	2
codon_usage	2
deleterious	2
double_strand_break	2
evolutionary_constraint	2
experimental_evolution	2
fungi	2
generations	2
genomics	2
hzygo	2
methods	2
microsatellites	2
mitochondria	2
mutational_robustness	2
negative_selection	2
neutralism	2
non-coding_dna	2
population_genetics	2
populations	2
regulatory	2
rpos	2
soil	2
sos	2
splicing	2
translesion	2
whole_genome	2
aa	1
ancient	1
compgenomics	1
e_coli	1
environmental_effects	1
fitness	1
gene_duplication	1
history	1
homomers	1
indel_rate	1
lhon	1
mcclintock	1
nucleotide_repeats	1
phastcons	1
phylip	1
point_mutation	1
population-genomics	1
primates	1
purifying	1
rate	1
repetitive_sequence	1
rna	1
transcription	1

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