Tag name [66 articles] Export

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	Seq-SNPing: Multiple-Alignment Tool for SNP Discovery, SNP ID Identification, and RFLP Genotyping [My Copy] OMICS: A Journal of Integrative Biology, Vol. 13, No. 3. (June 2009), pp. 253-260. by Hsueh-Wei Chang, Li-Yeh Chuang, Yu-Huei Cheng, Chang-Hsuan Ho, Cheng-Hao Wen, Cheng-Hong Yang posted to alignment name rflp snp tw by guhjy on 2009-06-21 11:01:08 as
	Contextual search and name disambiguation in email using graphs [My Copy] In SIGIR '06: Proceedings of the 29th annual international ACM SIGIR conference on Research and development in information retrieval (2006), pp. 27-34. by Einat Minkov, William W. Cohen, Andrew Y. Ng posted to disamiguation email graph name search walk by dyaaalbakour on 2009-06-16 13:32:41 as along with 3 people creswick ctl jiria
	Assessment of disease named entity recognition on a corpus of annotated sentences. [My Copy] BMC bioinformatics, Vol. 9 Suppl 3, No. Suppl 3. (2008), S3. by Antonio Jimeno, Ernesto Jimenez-Ruiz, Vivian Lee, Sylvain Gaudan, Rafael Berlanga, Dietrich Rebholz-Schuhmann posted to disease entity name ner recognition by eesruiz to the group ImagCom - Biomedical Text Computing on 2009-06-12 18:08:38 as along with 6 people and 2 groups balajis cdepablo henk-cul Effie guhjy dullhunk dbmi-nlp NaCTeM
	From XML to RDF: how semantic web technologies will change the design of 'omic' standards [My Copy] Nature Biotechnology, Vol. 23, No. 9. (07 September 2005), pp. 1099-1103. by Xiaoshu Wang, Robert Gorlitsky, Jonas S. Almeida posted to name semantic by eesruiz to the group ImagCom - Biomedical Text Computing on 2009-06-12 14:12:18 as along with 15 people and 2 groups egonw rvosa druvus badger_master irenas andytseng moborg wnpx dullhunk hpiwowar ianturton mza jmuhlich ibuch dansullivanblk dbk-lab SorgerLab
	Using co-occurrence network structure to extract synonymous gene and protein names from MEDLINE abstracts. [My Copy] BMC Bioinformatics, Vol. 6, No. 1. (22 April 2005) by A. M. Cohen, W. R. Hersh, C. Dubay, K. Spackman posted to entity gene name network protein recognition by eesruiz to the group ImagCom - Biomedical Text Computing on 2009-06-12 13:50:57 as along with 2 people and 1 group irenas gaudan dbk-lab
	OSIRISv1.2: a named entity recognition system for sequence variants of genes in biomedical literature [My Copy] BMC Bioinformatics, Vol. 9 (05 February 2008), 84. by Laura I. Furlong, Holger Dach, Martin Hofmann-Apitius, Ferran Sanz posted to extract name ner recognition by eesruiz on 2009-06-12 13:00:47 as along with 3 people henk-cul ibuch guhjy
	Biology's name game. [My Copy] Nature, Vol. 411, No. 6838. (7 June 2001), pp. 631-632. by H. Pearson posted to acronym biology gene name polysemy synonyms by fisherp on 2009-05-27 19:57:27 as along with 3 people and 2 groups irenas yas dullhunk dbk-lab T_lab
	ProMiner: rule-based protein and gene entity recognition [My Copy] BMC Bioinformatics, Vol. 6, No. Suppl 1. (2005), S14. by Daniel Hanisch, Katrin Fundel, Heinz T. Mevissen, Ralf Zimmer, Juliane Fluck posted to gene name recognition by eesruiz to the group ImagCom - Biomedical Text Computing on 2009-05-23 19:18:40 as along with 6 people and 1 group robert85 chad_davis yas zlu incovoma TheresaNiederberger T_lab
	Tagging gene and protein names in biomedical text. [My Copy] Bioinformatics, Vol. 18, No. 8. (August 2002), pp. 1124-1132. by L. Tanabe, W. J. Wilbur posted to gene name recognition by eesruiz to the group ImagCom - Biomedical Text Computing on 2009-05-23 19:08:54 as along with 9 people and 3 groups cisevol irenas jelsas fisherp zlu bundschu flint johnkork gaudan BergmanLab dbk-lab generif_paper
	Automatically annotating documents with normalized gene lists. [My Copy] BMC Bioinformatics, Vol. 6 Suppl 1 (2005) by J. Crim, R. McDonald, F. Pereira posted to gene name recognition by eesruiz on 2009-05-23 18:54:21 as along with 3 people and 1 group oannes zlu vlachmore Regulomics_UCHSC
	Gene symbol disambiguation using knowledge-based profiles [My Copy] Bioinformatics, Vol. 23, No. 8. (15 April 2007), pp. 1015-1022. by Xu, Hua, Fan, et al. Jung-Wei, Hripcsak, George, Mendonca, A. Eneida, Markatou, Marianthi posted to gene name recognition by eesruiz on 2009-05-23 18:44:13 as along with 2 people guhjy yas
	GAPSCORE: finding gene and protein names one word at a time. [My Copy] Bioinformatics, Vol. 20, No. 2. (22 January 2004), pp. 216-225. by J. T. Chang, H. Schütze, R. B. Altman posted to gene name recognition by eesruiz to the group ImagCom - Biomedical Text Computing on 2009-05-23 17:19:16 as along with 1 person and 1 group yas T_lab
	Thesaurus-based disambiguation of gene symbols. [My Copy] BMC Bioinformatics, Vol. 6 (16 June 2005) by B. J. Schijvenaars, B. Mons, M. Weeber, et al.M. J. Schuemie, E. M. van Mulligen, H. M. Wain, J. A. Kors posted to gene name recognition by eesruiz to the group ImagCom - Biomedical Text Computing on 2009-05-23 16:56:21 as along with 3 people and 1 group mroos yas Barend T_lab
	Obstacles of nomenclature [My Copy] Nature, Vol. 389, No. 6646. (4 September 1997), pp. 1-1. posted to gene name recognition by eesruiz on 2009-05-23 16:52:51 as
	Protein names precisely peeled off free text. [My Copy] Bioinformatics, Vol. 20 Suppl 1 (4 August 2004) by S. Mika, B. Rost posted to gene name recognition by eesruiz to the group ImagCom - Biomedical Text Computing on 2009-05-23 16:28:54 as along with 2 people t11 vlachmore
	What makes a gene name? Named entity recognition in the biomedical literature. [My Copy] Brief Bioinform, Vol. 6, No. 4. (December 2005), pp. 357-369. by U. Leser, J. Hakenberg posted to basic biology entity karla name ner recognition by eesruiz on 2009-05-19 13:51:53 as along with 4 people and 2 groups Sjitprasutwit svozil irenas miguel ImagCom - Biomedical Text Computing Bioinformatics
	The need for genetic variant naming standards in published abstracts of human genetic association studies [My Copy] BMC Research Notes, Vol. 2, No. 1. (2009), 56. by Wei Yu, Renee Ned, Anja Wulf, Tiebin Liu, Muin Khoury, Marta Gwinn posted to name pubmed snp by guhjy on 2009-05-16 16:15:46 as along with 2 people daforerog pkonings
	Mistaken identifiers: gene name errors can be introduced inadvertently when using Excel in bioinformatics. [My Copy] BMC Bioinformatics, Vol. 5 (23 June 2004) by B. R. Zeeberg, J. Riss, D. W. Kane, et al.K. J. Bussey, E. Uchio, W. M. Linehan, J. C. Barrett, J. N. Weinstein posted to error gene name by idonaldson on 2009-05-12 14:52:28 as along with 8 people farhat fisherp Borelli fgibson neteler dullhunk dandaman frohike
	Unsupervised language model adaptation via topic modeling based on named entity hypotheses [My Copy] Acoustics, Speech and Signal Processing, 2008. ICASSP 2008. IEEE International Conference on In Acoustics, Speech and Signal Processing, 2008. ICASSP 2008. IEEE International Conference on (2008), pp. 4921-4924. by Yang Liu, Feifan Liu posted to adaptation lm name by zzb3886 on 2009-04-14 20:52:30 as
	Improving out-of-vocabulary name resolution [My Copy] Computer Speech & Language, Vol. 19, No. 1. (January 2005), pp. 107-128. by D. Palmer posted to name by zzb3886 on 2009-04-13 20:20:25 as
	Data Selection in Semi-supervised Learning for Name Tagging [My Copy] In Proceedings of the Workshop on Information Extraction Beyond The Document (July 2006), pp. 48-55. by Heng Ji, Ralph Grishman posted to name by zzb3886 on 2009-04-03 22:52:53 as
	High-Performance Gene Name Normalization with GENO. [My Copy] Bioinformatics (Oxford, England) (2 February 2009) by Joachim Wermter, Katrin Tomanek, Udo Hahn posted to name by guhjy on 2009-03-17 09:00:24 as along with 1 person and 1 group cisevol BergmanLab
	Chinese Named Entity Recognition with Conditional Random Fields [My Copy] In Proceedings of the Fifth SIGHAN Workshop on Chinese Language Processing (July 2006), pp. 118-121. by Wenliang Chen, Yujie Zhang, Hitoshi Isahara posted to name by zzb3886 on 2009-03-16 19:33:21 as
	Foreign Language Translation of Chemical Nomenclature by Computer [My Copy] Journal of Chemical Information and Modeling, Vol. 49, No. 3. (23 March 2009), pp. 519-530. by Roger Sayle posted to captilization iupac languages name structure whitespace by zimbo1 on 2009-03-10 12:23:17 as along with 1 person ubcg08l
	Starting School: A Community Endeavor [My Copy] Childhood Education, Vol. 84, No. 5. (1 January 2008), 274. by Sue Dockett, Bob Perry posted to a also and assigned author by community contain document endeavor field may name names numbersstarting report school series sub-titles the this to by schoberchristine on 2009-02-28 07:45:30 as
	Beauty Is Only "Name" Deep: The Effect of First-Name On Ratings of Physical Attraction [My Copy] Journal of Applied Social Psychology, Vol. 10, No. 5. (1980), pp. 431-435. by Gary S. Garwood, Lewis Cox, Valerie Kaplan, Neal Wasserman, Jefferson L. Sulzer posted to impact name by louiseleyba on 2009-02-21 00:03:19 as along with 1 person RolandKappe
	MBA: a literature mining system for extracting biomedical abbreviations [My Copy] BMC Bioinformatics, Vol. 10, No. 1. (2009) by Yun Xu, Zhihao Wang, Yiming Lei, Yuzhong Zhao, Yu Xue posted to name pubmed by guhjy on 2009-02-07 08:39:41 as along with 5 people and 1 group Effie Gaetan yas zimbo1 mitko NaCTeM
	Name-aware speech recognition for interactive question answering [My Copy] Acoustics, Speech and Signal Processing, 2008. ICASSP 2008. IEEE International Conference on In Acoustics, Speech and Signal Processing, 2008. ICASSP 2008. IEEE International Conference on (2008), pp. 5113-5116. by S. Stoyanchev, G. Tur, D. Hakkani-Tur posted to asr name by zzb3886 on 2009-01-21 00:09:00 as
	Working memory across nostrils. [My Copy] Behavioral neuroscience, Vol. 122, No. 5. (October 2008), pp. 1031-1037. by Y. Yeshurun, Y. Dudai, N. Sobel posted to lateral memory name nostril by serpar on 2009-01-06 09:30:42 as
	MatchMiner: a tool for batch navigation among gene and gene product identifiers. [My Copy] Genome biology, Vol. 4, No. 4. (2003) by Kimberly J. Bussey, David Kane, Margot Sunshine, et al.Sudar Narasimhan, Satoshi Nishizuka, William C. Reinhold, Barry Zeeberg, Weinstein Ajay, John N. Weinstein posted to name by guhjy on 2008-12-20 08:33:53 as along with 3 people daforerog aalibes ranb
	Nymble: a high-performance learning name-finder [My Copy] In Proceedings of the fifth conference on Applied natural language processing (1997), pp. 194-201. by Daniel M. Bikel, Scott Miller, Richard Schwartz, Ralph Weischedel posted to name by zzb3886 on 2008-12-16 23:22:07 as along with 4 people nhoussos bwalenz arafalov julianpan
	Named Entity Extraction From Speech [My Copy] In in Proceedings of DARPA Broadcast News Transcription and Understanding Workshop (1998), pp. 287-292. by Francis Kubala, Richard Schwartz, Rebecca Stone, Ralph Weischedel posted to name speech by zzb3886 on 2008-12-16 21:51:55 as along with 3 people and 1 group marlar dmnapolitano cholwich searchingspeech2010
	CRONOS: the cross-reference navigation server. [My Copy] Bioinformatics (Oxford, England), Vol. 25, No. 1. (1 January 2009), pp. 141-143. by B. Waegele, I. Dunger-Kaltenbach, G. Fobo, C. Montrone, H. W. Mewes, A. Ruepp posted to name by guhjy on 2008-11-29 03:18:44 as along with 2 people and 1 group Effie nuin NaCTeM
	Detection of IUPAC and IUPAC-like chemical names [My Copy] Bioinformatics, Vol. 24, No. 13. (1 July 2008), pp. i268-276. by Roman Klinger, Corinna Kolarik, Juliane Fluck, Martin Hofmann-Apitius, Christoph M. Friedrich posted to drug name by guhjy on 2008-11-29 03:10:17 as along with 3 people N-te_Jr arafalov dullhunk
	Exploiting the contextual cues for bio-entity name recognition in biomedical literature. [My Copy] Journal of biomedical informatics, Vol. 41, No. 4. (August 2008), pp. 580-587. by Z. Yang, H. Lin, Y. Li posted to name pubmed by guhjy on 2008-11-28 10:01:14 as along with 1 person ctl
	BANNER: an executable survey of advances in biomedical named entity recognition. [My Copy] Pacific Symposium on Biocomputing. Pacific Symposium on Biocomputing (2008), pp. 652-663. by Robert Leaman, Graciela Gonzalez posted to name pubmed by guhjy on 2008-11-28 09:51:48 as along with 3 people joachimbaran vlachmore graciela
	DAVID gene ID conversion tool. [My Copy] Bioinformation, Vol. 2, No. 10. (2008), pp. 428-430. by Da Wei a. . W. Huang, Brad T. Sherman, Robert Stephens, Michael W. Baseler, H. Clifford Lane, Richard A. Lempicki posted to david name by guhjy on 2008-11-15 03:15:10 as along with 3 people bertelsen jfr daforerog
	Toward information extraction: identifying protein names from biological papers [My Copy] (1998), pp. 707-718. by K. Fukuda posted to biology entity extraction identification information language mining name named natural ner nlp processing protein recognition text by hammadafzal on 2008-11-11 18:29:33 as along with 1 person farzanehs
	Overview of BioCreAtIvE task 1B: normalized gene lists. [My Copy] BMC Bioinformatics, Vol. 6 Suppl 1 (2005) by L. Hirschman, M. Colosimo, A. Morgan, A. Yeh posted to biocreative evaluation gene identification name by leechuck on 2008-09-24 14:26:19 as along with 7 people and 2 groups yas helliontroy zlu wbaumgar vlachmore TheresaNiederberger satre T_lab biomedical-nlp
	Measuring ego-centered social networks on the web: Questionnaire design issues [My Copy] Social Networks, Vol. 30, No. 3. (July 2008), pp. 213-222. by Vasja Vehovar, Lozar, Gasper Koren, Valentina Hlebec posted to design generation measurement name network personal social by lackaff on 2008-09-17 18:22:07 as along with 3 people rickl tnhh theshadowhost
	Normalizing biomedical terms by minimizing ambiguity and variability [My Copy] BMC Bioinformatics, Vol. 9, No. Suppl 3. (2008) by Yoshimasa Tsuruoka, John Mcnaught, Sophia Ananiadou posted to name by guhjy on 2008-08-17 05:17:20 as along with 7 people and 2 groups Effie schwartzjmc cisevol yas dullhunk vlachmore satre NaCTeM BergmanLab
	Gene and protein nomenclature in public databases. [My Copy] BMC bioinformatics, Vol. 7 (09 August 2006), 372. by Katrin Fundel, Ralf Zimmer posted to name by guhjy on 2008-08-17 02:35:25 as along with 5 people daforerog hpiwowar jacky957 incovoma TheresaNiederberger
	Inter-species normalization of gene mentions with GNAT. [My Copy] Bioinformatics (Oxford, England), Vol. 24, No. 16. (15 August 2008) by J. Hakenberg, C. Plake, R. Leaman, M. Schroeder, G. Gonzalez posted to cross-species name pubmed by guhjy on 2008-08-17 02:34:21 as along with 2 people and 1 group cisevol graciela BergmanLab
	The Synergizer service for translating gene, protein and other biological identifiers [My Copy] Bioinformatics, Vol. 24, No. 19. (1 October 2008), pp. 2272-2273. by Gabriel F. Berriz, Frederick P. Roth posted to name by guhjy on 2008-08-17 02:27:57 as along with 8 people yaredo alyssaporter druvus nuin mitko tmmurali APRegier grahamc
	SNP ID-info: SNP ID searching and visualization platform. [My Copy] Omics : a journal of integrative biology, Vol. 12, No. 3. (26 September 2008), pp. 217-226. by Cheng-Hong H. Yang, Li-Yeh Y. Chuang, Yu-Huei H. Cheng, Cheng-Hao H. Wen, Phei-Lang L. Chang, Hsueh-Wei W. Chang posted to name snp tw by guhjy on 2008-07-15 15:30:58 as
	nuID: A universal naming schema of oligonucleotides for Illumina, Affymetrix, and other microarrays [My Copy] Biology Direct, Vol. 2 (31 May 2007), 16. by Pan Du, Warren A. Kibbe, Simon M. Lin posted to affy illumina name r by guhjy on 2008-07-14 04:21:47 as along with 3 people ptrobajo heliopais jfr
	Integrating high dimensional bi-directional parsing models for gene mention tagging. [My Copy] Bioinformatics (Oxford, England), Vol. 24, No. 13. (1 July 2008) by C. N. Hsu, Y. M. Chang, C. J. Kuo, Y. S. Lin, H. S. Huang, I. F. Chung posted to name pubmed text-mining by guhjy on 2008-07-11 04:20:03 as
	Simplifying the Personal Network Name Generator: Alternatives to Traditional Multiple and Single Name Generators [My Copy] Field Methods, Vol. 19, No. 2. (1 May 2007), pp. 163-193. by Alexandra Marin, Keith N. Hampton posted to generator name network personal by lackaff on 2008-04-28 23:38:51 as
	Data Mining: Practical Machine Learning Tools and Techniques, Second Edition (Morgan Kaufmann Series in Data Management Systems) [My Copy] (22 June 2005) by Ian H. Witten, Eibe Frank posted to bayes category editor formula function generic information naive name object utility by fernandohbc on 2008-03-30 20:13:17 as along with 47 people and 6 groups anib singhsh installe tomjad malibu pinventado alexjfalcao fiacobelli liamtoh333 tijszwinkels ihaque sugarexpletive karinaecomp gstiglic haiyeong imrchen baaic RafaUsyd tmancill druvus dullhunk GJNauta sb-3000 sammydre balicea sdvillal caporaso AbnerCYH brunomelo dejang mdifranc BastianSpanneberg velasco azazello ezralanglois pprett gmonce scorreia_pro csacca jdu bobychan napvasconcelos soramame_0518 abellogin quianominorleo eegilbert akastrin mlkd WAND AI biomedical-nlp RiSE CSBBGraphTheory
	The Protein Identifier Cross-Referencing (PICR) service: reconciling protein identifiers across multiple source databases. [My Copy] BMC bioinformatics, Vol. 8, No. 1. (2007) by Richard G. Côté, Philip Jones, Lennart Martens, et al.Samuel Kerrien, Florian Reisinger, Quan Lin, Rasko Leinonen, Rolf Apweiler, Henning Hermjakob posted to identifier name protein db by guhjy on 2008-03-21 03:21:14 as along with 12 people saunders robert druvus whoare chad_davis dullhunk niallhaslam antonkratz barriot dansullivanblk tny kynn

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