Tag ncrna [at least 200 articles] Export

Recent papers classified by the tag ncrna.

	Many human large intergenic noncoding RNAs associate with chromatin-modifying complexes and affect gene expression [My Copy] Proceedings of the National Academy of Sciences, Vol. 106, No. 28. (14 July 2009), pp. 11667-11672. by Ahmad M. Khalil, Mitchell Guttman, Maite Huarte, et al.Manuel Garber, Arjun Raj, Dianali Rivea Morales, Kelly Thomas, Aviva Presser, Bradley E. Bernstein, Alexander van Oudenaarden, Aviv Regev, Eric S. Lander, John L. Rinn posted to ncrna by jwfoley on 2009-11-09 21:38:49 as along with 7 people and 1 group inesdesantiago xianjun daforerog clearbluespring wsjames scjparker fenghezi Oxford Virology
	Chromatin signature reveals over a thousand highly conserved large non-coding RNAs in mammals [My Copy] Nature, Vol. 458, No. 7235. (01 February 2009), pp. 223-227. by Mitchell Guttman, Ido Amit, Manuel Garber, et al.Courtney French, Michael F. Lin, David Feldser, Maite Huarte, Or Zuk, Bryce W. Carey, John P. Cassady, Moran N. Cabili, Rudolf Jaenisch, Tarjei S. Mikkelsen, Tyler Jacks, Nir Hacohen, Bradley E. Bernstein, Manolis Kellis, Aviv Regev, John L. Rinn, Eric S. Lander posted to ncrna mouse by jwfoley on 2009-11-09 21:37:52 as along with 28 people and 2 groups rsaito greg mkiyer gdb YukaH galka8_diploma antonkratz bertelsen natstreet fenghezi TRHvidsten megraw tonamswish biomcgary inesdesantiago djkt samgj dchughes admash neils absterga cisevol jm12 WanderingAengus daforerog bpcusack ericsuh mhamada Chinnaiyan Lab JLab
	Induced ncRNAs allosterically modify RNA-binding proteins in cis to inhibit transcription [My Copy] Nature, Vol. 454, No. 7200. (28 May 2008), pp. 126-130. by Xiangting Wang, Shigeki Arai, Xiaoyuan Song, et al.Donna Reichart, Kun Du, Gabriel Pascual, Paul Tempst, Michael G. Rosenfeld, Christopher K. Glass, Riki Kurokawa posted to ncrna by jwfoley on 2009-11-09 21:28:04 as along with 3 people galka8_diploma maximilianh rdowell
	A screen for conserved sequences with biased base composition identifies noncoding RNAs in the A-T rich genome of Plasmodium falciparum. [My Copy] Molecular and biochemical parasitology, Vol. 144, No. 2. (December 2005), pp. 149-158. by Roopam Upadhyay, Praveen Bawankar, Deepti Malhotra, Swati Patankar posted to ncrna malaria by GeeSharpMinor on 2009-11-06 16:08:47 as
	Structural RNAs of known and unknown function identified in malaria parasites by comparative genomics and RNA analysis. [My Copy] RNA (New York, N.Y.), Vol. 13, No. 11. (27 November 2007), pp. 1923-1939. by Kausik Chakrabarti, Michael Pearson, Leslie Grate, et al.Timothy Sterne-Weiler, Jonathan Deans, John Paul P. Donohue, Manuel Ares posted to ncrna malaria by GeeSharpMinor on 2009-11-05 23:30:43 as along with 2 people becarmson mdimon
	A novel non-protein-coding infection-specific gene family is clustered throughout the genome of Phytophthora infestans [My Copy] Microbiology, Vol. 153, No. 3. (1 March 2007), pp. 747-759. by Anna O. Avrova, Stephen C. Whisson, Leighton Pritchard, et al.Eduard Venter, Sergio De Luca, Ingo Hein, Paul R. J. Birch posted to ncrna by GeeSharpMinor on 2009-11-05 19:40:29 as
	Non-coding RNAs: new players in eukaryotic biology. [My Copy] Gene, Vol. 357, No. 2. (12 September 2005), pp. 83-94. by Fabrício F. Costa posted to ncrna by GeeSharpMinor on 2009-11-05 19:39:39 as along with 4 people jwortman eckart_bindewald tardigrade mtagaya
	Non-coding RNAs: Lost in translation? [My Copy] Gene, Vol. 386, No. 1-2. (15 January 2007), pp. 1-10. by Fabrício F. Costa posted to ncrna by GeeSharpMinor on 2009-11-05 19:36:47 as along with 4 people and 3 groups rdowell thomaskf andersbj dchughes microRNA G4ID Genetics-of-Gambling
	Nuclear Non-coding RNAs Are Transcribed from the Centromeres of Plasmodium falciparum and Are Associated with Centromeric Chromatin [My Copy] Journal of Biological Chemistry, Vol. 283, No. 9. (29 February 2008), pp. 5692-5698. by Felomena Li, Lakshmi Sonbuchner, Sue A. Kyes, Christian Epp, Kirk W. Deitsch posted to ncrna malaria by GeeSharpMinor on 2009-11-05 19:35:59 as
	Employment opportunities for non-coding RNAs [My Copy] FEBS Letters, Vol. 567, No. 1. (1 June 2004), pp. 27-34. by C. Morey posted to ncrna by GeeSharpMinor on 2009-11-05 19:32:38 as along with 4 people and 1 group LeightonP evaf arcticrasta dortsjennifer ecotoxurbo
	Small silencing RNAs: an expanding universe [My Copy] Nat Rev Genet, Vol. 10, No. 2. (01 February 2009), pp. 94-108. by Megha Ghildiyal, Phillip D. Zamore posted to review ncrna by tonamswish on 2009-11-03 18:37:41 as along with 16 people and 2 groups sebastien_vigneau gwallau guhjy timflutre galka8_diploma jbhiatt idonaldson xingxu natstreet mhamada heliopais misonneh valeriehilgers diaz0058 lp2 druvus Small RNAs microRNA
	The Biogenesis and Function of PIWI Proteins and piRNAs: Progress and Prospect [My Copy] Annual Review of Cell and Developmental Biology, Vol. 25, No. 1. (2009), pp. 355-376. by Travis Thomson, Haifan Lin posted to review pirna ncrna by tonamswish on 2009-11-03 18:32:19 as along with 1 person heliopais
	Short ultraconserved promoter regions delineate a class of preferentially expressed alternatively spliced transcripts. [My Copy] Genomics, Vol. 94, No. 5. (04 November 2009), pp. 308-316. by Christian Rödelsperger, Sebastian Köhler, Marcel H. Schulz, Thomas Manke, Sebastian Bauer, Peter N. Robinson posted to tf ncrna mining genomics expression by daforerog on 2009-11-02 13:45:41 as
	MicroRNAs: small RNAs with a big role in gene regulation [My Copy] Nature Reviews Genetics, Vol. 5, No. 7. (01 July 2004), pp. 522-531. by Lin He, Gregory J. Hannon posted to ncrna by GeeSharpMinor on 2009-11-01 22:44:53 as along with 8 people and 1 group heliopais fishtank vvoorr guhjy jfr dchughes ealloza cerami microRNA
	Ribo-gnome: The Big World of Small RNAs [My Copy] Science, Vol. 309, No. 5740. (2 September 2005), pp. 1519-1524. by Phillip D. Zamore, Benjamin Haley posted to ncrna by GeeSharpMinor on 2009-11-01 22:44:20 as along with 6 people and 1 group heliopais dchughes dayjm cdawson cerami mdphillips GIG
	Advances in microRNAs: implications for immunity and inflammatory diseases [My Copy] Journal of Cellular and Molecular Medicine, Vol. 13, No. 1. (January 2009), pp. 24-38. by E. Sonkoly, A. Pivarcsi posted to ncrna immunology by GeeSharpMinor on 2009-11-01 22:42:47 as along with 3 people guhjy roboonya valeriehilgers
	The molecular machines that mediate microRNA maturation [My Copy] Journal of Cellular and Molecular Medicine, Vol. 13, No. 1. (January 2009), pp. 54-60. by Pick-Wei Lau, Ian J. MacRae posted to ncrna by GeeSharpMinor on 2009-11-01 22:41:25 as along with 4 people fishtank guhjy valeriehilgers daforerog
	Non\|[ndash]\|coding RNA genes and the modern RNA world [My Copy] Nature Reviews Genetics, Vol. 2, No. 12. (01 December 2001), pp. 919-929. by Sean R. Eddy posted to ncrna by GeeSharpMinor on 2009-11-01 22:41:13 as along with 6 people and 2 groups heliopais reyez evaf eckart_bindewald arcticrasta bsmagic Bioinformatics bioinplant
	Translational regulation by non-protein-coding RNAs: Different targets, common themes [My Copy] Biochemical and Biophysical Research Communications, Vol. 373, No. 4. (05 September 2008), pp. 462-466. by W. Xie, W. Tedbrown, R. Denman posted to ncrna by GeeSharpMinor on 2009-11-01 22:36:59 as along with 1 person MSchipper
	Non-coding RNA [My Copy] Hum. Mol. Genet., Vol. 15 Spec No 1, No. suppl_1. (15 April 2006), pp. R17-29. by John S. Mattick, Igor V. Makunin posted to rna ncrna by GeeSharpMinor on 2009-10-30 23:50:51 as along with 16 people and 7 groups danaiancu rb_india zanexu myrtilus tuck marcius eckart_bindewald tardigrade andersbj dchughes mtagaya scroft bsmagic cabbagezs bertelsen robertkofler Bioinformatics microRNA G4ID BioinfoCIPF bioinplant SGU-CIPF Genetics-of-Gambling
	The functional genomics of noncoding RNA. [My Copy] Science (New York, N.Y.), Vol. 309, No. 5740. (2 September 2005), pp. 1527-1528. by John S. Mattick posted to rna ncrna by GeeSharpMinor on 2009-10-30 23:47:19 as along with 12 people and 8 groups coela biozhang2001 lyongu marcius alexg eckart_bindewald dchughes mtagaya cmm neveaire bsmagic jayster4 Biostatistics Computational-Genomics Bioinformatics Neuroscience FAB-lab BioinfoCIPF bioinplant SGU-CIPF
	Small non-coding RNAs and genomic imprinting. [My Copy] Cytogenetic and genome research, Vol. 113, No. 1-4. (2006), pp. 99-108. by H. Royo, M-L L. Bortolin, H. Seitz, J. Cavaillé posted to rna ncrna by GeeSharpMinor on 2009-10-30 23:44:24 as along with 1 person and 2 groups dchughes G4ID Genetics-of-Gambling
	Waste not, want not--transcript excess in multicellular eukaryotes. [My Copy] Trends in genetics : TIG, Vol. 21, No. 5. (May 2005), pp. 287-288. by Jürgen Brosius posted to rna ncrna by GeeSharpMinor on 2009-10-30 23:44:17 as along with 2 people setar mtagaya
	Transcriptional Scaffolds for Heterochromatin Assembly [My Copy] Vol. 136, No. 4. (20 February 2009), pp. 610-614. by Hugh P. Cam, Ee S. Chen, Shiv I. S. Grewal posted to rna ncrna by GeeSharpMinor on 2009-10-30 23:42:17 as
	Small RNAs in transcriptional gene silencing and genome defence [My Copy] Nature, Vol. 457, No. 7228. (21 January 2009), pp. 413-420. by Danesh Moazed posted to rna ncrna by GeeSharpMinor on 2009-10-30 23:40:43 as along with 4 people guhjy jfr ealloza pablocarb
	Beyond Mfold: recent advances in RNA bioinformatics. [My Copy] Journal of biotechnology, Vol. 124, No. 1. (25 June 2006), pp. 41-55. by Jens Reeder, Matthias Höchsmann, Marc Rehmsmeier, Björn Voss, Robert Giegerich posted to silico review ncrna mirna by daforerog on 2009-10-30 19:56:18 as along with 20 people and 4 groups tonamswish heliopais danaiancu rb_india ellarond GustavoLacerda hrogers marcius eckart_bindewald tardigrade andersbj arcticrasta mtagaya condon Hosna Eonwe cthachuk stajich physics reyez microRNA beta BioinfoCIPF SGU-CIPF
	Comparison of P-RnaPredict and mfold - algorithms for RNA secondary structure prediction. [My Copy] Bioinformatics (10 February 2006) by Kay C. Wiese, Andrew Hendriks posted to silico review ncrna mirna mining by daforerog on 2009-10-30 19:54:52 as along with 2 people and 2 groups marcius eckart_bindewald BioinfoCIPF SGU-CIPF
	A global view of the nonprotein-coding transcriptome in Plasmodium falciparum [My Copy] Nucl. Acids Res. (28 October 2009), gkp895. by Carsten A. Raabe, Cecilia P. Sanchez, Gerrit Randau, et al.Thomas Robeck, Boris V. Skryabin, Suresh V. Chinni, Michael Kube, Richard Reinhardt, Guey H. Ng, Ravichandran Manickam, Vladimir Y. Kuryshev, Michael Lanzer, Juergen Brosius, Thean H. Tang, Timofey S. Rozhdestvensky posted to ncrna malaria by GeeSharpMinor on 2009-10-30 01:38:39 as along with 1 group Journal picks
	The tedious task of finding homologous noncoding RNA genes. [My Copy] RNA (New York, N.Y.) (27 October 2009) by Peter Menzel, Jan Gorodkin, Peter F. Stadler posted to ncrna annotation by samgj on 2009-10-29 11:23:44 as along with 2 people toni_marco dchughes
	RNALogo: a new approach to display structural RNA alignment. [My Copy] Nucleic acids research, Vol. 36, No. Web Server issue. (1 July 2008) by Tzu-Hao H. Chang, Jorng-Tzong T. Horng, Hsien-Da D. Huang posted to silico ncrna mirna mining by daforerog on 2009-10-28 12:25:43 as along with 2 people reyez bootsy
	Target prediction for small, noncoding RNAs in bacteria [My Copy] Nucl. Acids Res., Vol. 34, No. 9. (22 May 2006), pp. 2791-2802. by Brian Tjaden, Sarah S. Goodwin, Jason A. Opdyke, et al.Maude Guillier, Daniel X. Fu, Susan Gottesman, Gisela Storz posted to target_prediction ncrna by thomaskf on 2009-10-27 09:29:53 as along with 1 person druvus
	Epigenetic regulation in mammalian preimplantation embryo development. [My Copy] Reproductive biology and endocrinology : RB&E, Vol. 7 (05 June 2009), 59. by Lingjun Shi, Ji Wu posted to review ncrna histone_variants histone_modification epigenetic dna_methylation by RyuOgawa on 2009-10-24 03:58:26 as
	Crystal structure of human selenocysteine tRNA [My Copy] Nucl. Acids Res., Vol. 37, No. 18. (1 October 2009), pp. 6259-6268. by Yuzuru Itoh, Shiho Chiba, Shun-ichi Sekine, Shigeyuki Yokoyama posted to trna rna ncrna crystal_structure by ppgardne to the group Journal picks on 2009-10-20 08:55:45 as
	Transposable elements in disease-associated cryptic exons [My Copy] Human Genetics by Igor Vorechovsky posted to ncrna humgen genomics expression assoc by daforerog on 2009-10-19 16:20:34 as
	An Intergenic Non-Coding rRNA Correlated with Expression of the rRNA and Frequency of an rRNA Single Nucleotide Polymorphism in Lung Cancer Cells [My Copy] PLoS ONE, Vol. 4, No. 10. (19 October 2009), e7505. by Yih-Horng Shiao, Sorin T. Lupascu, Yuhan D. Gu, et al.Wojciech Kasprzak, Christopher J. Hwang, Janet R. Fields, Robert M. Leighty, Octavio Quiñones, Bruce A. Shapiro, W. Gregory Alvord, Lucy M. Anderson posted to ncrna mining humgen by daforerog on 2009-10-19 14:15:31 as along with 1 person and 1 group ppgardne Journal picks
	A Nanostructure Made of a Bacterial Noncoding RNA. [My Copy] Journal of the American Chemical Society, Vol. 0, No. 0. (12 October 2009) by Bastien Cayrol, Claude Nogues, Alexandre Dawid, Irit Sagi, Pascal Silberzan, Hervé Isambert posted to rna_structure rna ncrna nanostructure escherishia_coli by ppgardne to the group Journal picks on 2009-10-15 09:07:11 as along with 1 person qshao
	Evolutionary rates and patterns for human transcription factor binding sites derived from repetitive DNA. [My Copy] BMC genomics, Vol. 9 (17 May 2008), 226. by Nalini Polavarapu, Leonardo Mariño-Ramírez, David Landsman, John F. McDonald, I. King Jordan posted to tf silico neurola ncrna mining by daforerog on 2009-10-12 17:36:00 as along with 3 people and 2 groups cisevol pradiptaray bryankr BergmanLab cis-regulatory-evolution
	Repetitive DNA elements, nucleosome binding and human gene expression. [My Copy] Gene, Vol. 436, No. 1-2. (1 May 2009), pp. 12-22. by Ahsan Huda, Leonardo Mariño-Ramírez, David Landsman, I. King Jordan posted to tf silico neurola ncrna mining by daforerog on 2009-10-12 17:31:42 as along with 1 person guhjy
	Origin and evolution of human microRNAs from transposable elements. [My Copy] Genetics, Vol. 176, No. 2. (15 June 2007), pp. 1323-1337. by Jittima Piriyapongsa, Leonardo Mariño-Ramírez, I. King Jordan posted to ncrna mirna by daforerog on 2009-10-12 17:25:07 as along with 8 people and 5 groups coldmeadow gpappas tardigrade andersbj dchughes mtagaya cisevol emptyhb microRNA G4ID Genetics-of-Gambling cis-regulatory-evolution BergmanLab
	Homology-based annotation of non-coding RNAs in the genomes of Schistosoma mansoni and Schistosoma japonicum [My Copy] BMC Genomics, Vol. 10, No. 1. (2009), 464. by Claudia Copeland, Manja Marz, Dominic Rose, et al.Jana Hertel, Paul Brindley, Clara B. Santana, Stephanie Kehr, Camille Stephan Otto Attolini, Peter Stadler posted to schistosomes rna ncrna homology_search helminth_parasites by ppgardne to the group Journal picks on 2009-10-11 14:03:48 as
	TERRA: telomeric repeat-containing RNA. [My Copy] The EMBO journal, Vol. 28, No. 17. (2 September 2009), pp. 2503-2510. by Brian Luke, Joachim Lingner posted to ncrna by daforerog on 2009-10-09 17:31:03 as
	Toggle involving cis-interfering noncoding RNAs controls variegated gene expression in yeast [My Copy] Proceedings of the National Academy of Sciences, Vol. 106, No. 43. (27 October 2009), pp. 18321-18326. by Stacie L. Bumgarner, Robin D. Dowell, Paula Grisafi, David K. Gifford, Gerald R. Fink posted to rnas regulatory_roles ncrna by ppgardne to the group Journal picks on 2009-10-07 11:37:51 as along with 1 person bpcusack
	Customized strategies for discovering distant ncRNA homologs [My Copy] Brief Funct Genomic Proteomic (24 September 2009), elp035. by Axel Mosig, Liang Zhu, Peter F. Stadler posted to prediction ncrna by hrogers on 2009-09-28 10:28:12 as
	Human miRNA Precursors with Box H/ACA snoRNA Features [My Copy] PLoS Comput Biol, Vol. 5, No. 9. (18 September 2009), e1000507. by Michelle S. Scott, Fabio Avolio, Motoharu Ono, Angus I. Lamond, Geoffrey J. Barton posted to ncrna mirna by daforerog on 2009-09-24 17:32:24 as along with 5 people and 1 group gdb samgj al2na hrogers stajich Mycology
	MicroRNAs tell an evo\|[ndash]\|devo story [My Copy] Nature Reviews Neuroscience, Vol. 10, No. 10. (09 September 2009), pp. 754-759. by Kenneth S. Kosik posted to neuroscience ncrna microrna evolutionary_developmental_biology by roys on 2009-09-23 00:54:36 as along with 3 people and 1 group heliopais valeriehilgers dchughes microRNA
	The Genetic Signatures of Noncoding RNAs [My Copy] PLoS Genet, Vol. 5, No. 4. (24 April 2009), e1000459. by John S. Mattick posted to ncrna by antonkratz on 2009-09-22 18:38:49 as along with 21 people and 2 groups Zephyrus bertelsen frohike natstreet guhjy gdb giovenko galka8_diploma aditi9783 daforerog ealloza dpollard hrogers coela ilyashl fenghezi reyez maximilianh giovanni djkt stajich RockmanLab Mycology
	Eukaryotic regulatory RNAs: an answer to the âgenome complexityâ conundrum [My Copy] Genes & Development, Vol. 21, No. 1. (1 January 2007), pp. 11-42. by Kannanganattu V. Prasanth, David L. Spector posted to ncrna genome_complexity by roys on 2009-09-19 00:55:59 as along with 7 people and 2 groups GeeSharpMinor galka8_diploma dchughes Carnegie proudhon rarpa121 msasaki2 G4ID Genetics-of-Gambling
	Experimental approaches for the discovery and characterization of regulatory small RNA. [My Copy] Current opinion in microbiology (14 September 2009) by Cynthia Mira M. Sharma, Jörg Vogel posted to srna rna_binding_proteins ncrna high_throughput by ppgardne to the group Journal picks on 2009-09-18 16:33:43 as along with 1 person behindtherabbit
	Evidence for a major role of antisense RNAs in cyanobacterial gene regulation. [My Copy] Molecular systems biology, Vol. 5 (15 September 2009) by Jens Georg, Björn Voss, Ingeborg Scholz, Jan Mitschke, Annegret Wilde, Wolfgang R. Hess posted to rna regulatory_networks ncrna cyanobacterium by ppgardne to the group Journal picks on 2009-09-18 10:53:32 as along with 2 people lymxz reyez
	Evolution and functions of long noncoding RNAs. [My Copy] Cell, Vol. 136, No. 4. (20 February 2009), pp. 629-641. by Chris P. Ponting, Peter L. Oliver, Wolf Reik posted to review ncrna by roys on 2009-09-17 06:20:27 as along with 5 people taylor73 guhjy erikarner provero mbj

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microrna	212
review	137
mirna	115
rna	112
snorna	76
bioinformatics	73
prediction	50
evolution	39
genome	36
cluster	33
printed	32
transcriptome	28
database	26
disorder	24
genomics	24
antisense	23
transcription	23
trna	23
cancer	22
sirna	22
expression	21
function	21
imprinting	19
pirna	19
structure	19
unread	19
algorithm	18
promoter	18
regulation	17
brain	14
mattick	14
rnai	14
chromatin	13
classification	13
microarray	13
neuroscience	13
rasirna	13
epigenetics	12
plant	12
read	12
regulatory	12
human	11
nar	11
silico	11
mining	10
repeat	10
secondary_structure	10
yeast	10
alignment	9
computational_biology	9
drosophila	9
motif	9
tss	9
u14	9
carninci	8
development	8
experimental	8
folding	8
humgen	8
methods	8
small_rna	8
target	8
clustering	7
conservation	7
hox	7
xist	7
approaches	6
arabidopsis	6
bacteria	6
encode	6
highly	6
intron	6
mammals	6
phylogeny	6
plos	6
rrna	6
srna	6
telomerase	6
virus	6
alu	5
annotation	5
db	5
disease	5
functional	5
leukemia	5
megareview	5
mice	5
non-coding-rna	5
polymerase	5
pseudoknot	5
secondary_structure_prediction	5
silencing	5
spectrometry	5
structure_motif	5
virology	5
y	5
biology	4
malaria	4
non-protein-coding	4
snp	4

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